View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17145_high_40 (Length: 249)

Name: NF17145_high_40
Description: NF17145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17145_high_40
NF17145_high_40
[»] chr4 (67 HSPs)
chr4 (1-89)||(16278704-16278792)
chr4 (3-89)||(53388084-53388170)
chr4 (1-89)||(33848460-33848548)
chr4 (1-89)||(9388467-9388554)
chr4 (3-69)||(16359114-16359180)
chr4 (3-69)||(28382474-28382540)
chr4 (3-69)||(15280486-15280552)
chr4 (3-85)||(15989740-15989821)
chr4 (3-69)||(47127191-47127257)
chr4 (1-72)||(13877703-13877774)
chr4 (3-83)||(27027532-27027611)
chr4 (1-72)||(13881362-13881433)
chr4 (3-69)||(286739-286805)
chr4 (3-68)||(10313366-10313430)
chr4 (3-83)||(20899770-20899849)
chr4 (1-85)||(24047877-24047960)
chr4 (21-83)||(15242604-15242666)
chr4 (3-69)||(16278588-16278654)
chr4 (21-83)||(56116291-56116353)
chr4 (3-72)||(21190126-21190195)
chr4 (1-68)||(15990035-15990102)
chr4 (21-67)||(55503188-55503234)
chr4 (4-69)||(6511394-6511458)
chr4 (22-83)||(18221088-18221149)
chr4 (3-83)||(33684910-33684989)
chr4 (1-69)||(33848559-33848626)
chr4 (1-69)||(41791339-41791406)
chr4 (1-68)||(3336989-3337055)
chr4 (21-67)||(4170576-4170622)
chr4 (21-67)||(14698268-14698314)
chr4 (3-68)||(14942753-14942817)
chr4 (3-68)||(56115998-56116063)
chr4 (21-68)||(41791220-41791268)
chr4 (1-68)||(286780-286847)
chr4 (1-68)||(15448483-15448549)
chr4 (1-68)||(15449806-15449872)
chr4 (1-68)||(16278507-16278573)
chr4 (1-68)||(16278665-16278731)
chr4 (1-68)||(16359155-16359222)
chr4 (2-68)||(27027587-27027652)
chr4 (1-68)||(8710573-8710642)
chr4 (3-68)||(16278548-16278613)
chr4 (3-68)||(56115918-56115983)
chr4 (21-69)||(6511551-6511599)
chr4 (1-69)||(15242466-15242533)
chr4 (1-69)||(15989995-15990062)
chr4 (1-69)||(28382553-28382620)
chr4 (1-69)||(56116036-56116103)
chr4 (1-68)||(286820-286886)
chr4 (1-68)||(4170654-4170720)
chr4 (1-68)||(6511435-6511501)
chr4 (1-68)||(14698346-14698412)
chr4 (1-48)||(27027691-27027738)
chr4 (1-68)||(47127149-47127216)
chr4 (3-57)||(4170742-4170796)
chr4 (3-69)||(10313443-10313508)
chr4 (3-57)||(14698434-14698488)
chr4 (1-55)||(55503129-55503183)
chr4 (3-68)||(16359195-16359259)
chr4 (3-68)||(24047840-24047903)
chr4 (3-56)||(53388044-53388097)
chr4 (36-68)||(31131813-31131845)
chr4 (1-48)||(14942672-14942719)
chr4 (1-55)||(15989930-15989984)
chr4 (3-69)||(56116156-56116221)
chr4 (1-34)||(3337084-3337117)
chr4 (3-68)||(6511474-6511538)
[»] scaffold0525 (9 HSPs)
scaffold0525 (1-89)||(8661-8749)
scaffold0525 (3-69)||(11357-11423)
scaffold0525 (1-69)||(11237-11304)
scaffold0525 (1-68)||(8838-8904)
scaffold0525 (1-68)||(11276-11342)
scaffold0525 (1-69)||(11198-11265)
scaffold0525 (1-68)||(11315-11382)
scaffold0525 (3-57)||(8771-8824)
scaffold0525 (3-68)||(8877-8941)
[»] chr8 (51 HSPs)
chr8 (1-89)||(17794950-17795038)
chr8 (3-69)||(22145826-22145892)
chr8 (3-69)||(44523254-44523320)
chr8 (3-69)||(22059818-22059884)
chr8 (1-85)||(20459858-20459941)
chr8 (1-85)||(21861692-21861775)
chr8 (1-84)||(38186148-38186230)
chr8 (3-83)||(43111894-43111973)
chr8 (1-72)||(15004838-15004909)
chr8 (3-69)||(17614609-17614675)
chr8 (3-81)||(19881713-19881790)
chr8 (1-68)||(22145744-22145811)
chr8 (21-68)||(28853525-28853572)
chr8 (21-68)||(45135430-45135477)
chr8 (21-83)||(363599-363661)
chr8 (21-83)||(44431476-44431538)
chr8 (3-71)||(32949540-32949607)
chr8 (1-69)||(45135292-45135359)
chr8 (21-72)||(17614528-17614579)
chr8 (1-68)||(19881766-19881832)
chr8 (1-68)||(19881962-19882029)
chr8 (21-83)||(362289-362351)
chr8 (1-68)||(7301419-7301485)
chr8 (28-83)||(21415658-21415713)
chr8 (1-68)||(22145784-22145851)
chr8 (1-68)||(28853604-28853670)
chr8 (1-68)||(32949583-32949649)
chr8 (1-68)||(43111949-43112015)
chr8 (3-68)||(363693-363758)
chr8 (21-66)||(6608777-6608822)
chr8 (3-68)||(44431766-44431831)
chr8 (21-69)||(7301673-7301721)
chr8 (1-69)||(17795049-17795116)
chr8 (21-85)||(20454246-20454310)
chr8 (1-68)||(6608679-6608745)
chr8 (1-68)||(19881923-19881989)
chr8 (1-68)||(44431648-44431715)
chr8 (3-57)||(6608603-6608657)
chr8 (3-69)||(24708133-24708198)
chr8 (1-55)||(44431543-44431597)
chr8 (1-69)||(7301458-7301525)
chr8 (1-69)||(7301536-7301603)
chr8 (1-69)||(20459952-20460019)
chr8 (3-55)||(21415595-21415647)
chr8 (1-69)||(44431726-44431793)
chr8 (1-68)||(19881845-19881911)
chr8 (1-68)||(22145705-22145771)
chr8 (31-68)||(17272816-17272853)
chr8 (3-68)||(21415555-21415620)
chr8 (1-69)||(22059699-22059766)
chr8 (1-69)||(44431608-44431675)
[»] chr7 (69 HSPs)
chr7 (3-89)||(13395948-13396034)
chr7 (1-89)||(17506227-17506315)
chr7 (1-89)||(17546899-17546987)
chr7 (3-69)||(13733930-13733996)
chr7 (3-69)||(38827797-38827863)
chr7 (3-69)||(48784846-48784912)
chr7 (3-83)||(13850089-13850168)
chr7 (1-85)||(14189442-14189525)
chr7 (21-81)||(14192216-14192276)
chr7 (1-84)||(13255414-13255496)
chr7 (3-69)||(17506111-17506177)
chr7 (3-69)||(17547037-17547103)
chr7 (1-83)||(35365924-35366005)
chr7 (3-85)||(48743227-48743308)
chr7 (21-82)||(711049-711110)
chr7 (21-68)||(8775873-8775920)
chr7 (1-68)||(13395866-13395933)
chr7 (21-67)||(124632-124678)
chr7 (21-83)||(16573075-16573137)
chr7 (21-83)||(16592525-16592587)
chr7 (1-69)||(8775991-8776058)
chr7 (1-69)||(16006085-16006152)
chr7 (21-81)||(47976061-47976121)
chr7 (1-68)||(16573169-16573236)
chr7 (1-68)||(16592426-16592493)
chr7 (22-72)||(13407736-13407786)
chr7 (21-67)||(21743808-21743854)
chr7 (1-69)||(13849929-13849996)
chr7 (1-69)||(16006007-16006074)
chr7 (1-69)||(48784925-48784992)
chr7 (1-69)||(48784964-48785031)
chr7 (1-69)||(48785003-48785070)
chr7 (1-68)||(13395827-13395893)
chr7 (21-68)||(16005889-16005936)
chr7 (1-68)||(17506188-17506254)
chr7 (1-68)||(17546960-17547026)
chr7 (1-55)||(4993190-4993244)
chr7 (3-69)||(14189366-14189431)
chr7 (1-67)||(48743284-48743350)
chr7 (3-68)||(13395908-13395973)
chr7 (3-68)||(13850049-13850113)
chr7 (3-68)||(21065471-21065536)
chr7 (1-85)||(11660747-11660829)
chr7 (1-69)||(13395788-13395855)
chr7 (1-69)||(14189324-14189392)
chr7 (22-82)||(21735541-21735601)
chr7 (1-69)||(48785042-48785109)
chr7 (21-68)||(4993059-4993106)
chr7 (1-68)||(13850007-13850074)
chr7 (1-68)||(14192158-14192223)
chr7 (1-68)||(21743710-21743776)
chr7 (1-55)||(124573-124627)
chr7 (1-55)||(709723-709777)
chr7 (3-57)||(21743634-21743688)
chr7 (1-46)||(709657-709702)
chr7 (22-83)||(13865424-13865485)
chr7 (1-68)||(40555765-40555834)
chr7 (1-68)||(13255745-13255810)
chr7 (1-55)||(16005941-16005996)
chr7 (1-47)||(22122769-22122816)
chr7 (1-68)||(38827916-38827983)
chr7 (1-47)||(40555970-40556017)
chr7 (3-68)||(11660803-11660866)
chr7 (11-47)||(8757416-8757452)
chr7 (36-68)||(12757143-12757175)
chr7 (1-69)||(13255705-13255771)
chr7 (1-69)||(14192119-14192186)
chr7 (1-69)||(21065509-21065576)
chr7 (4-48)||(23442324-23442368)
[»] chr2 (42 HSPs)
chr2 (1-89)||(20591472-20591560)
chr2 (1-89)||(23339646-23339734)
chr2 (1-69)||(44620583-44620651)
chr2 (3-69)||(12628195-12628261)
chr2 (3-69)||(25036073-25036139)
chr2 (3-69)||(41685128-41685194)
chr2 (3-83)||(23374868-23374947)
chr2 (3-71)||(24275717-24275784)
chr2 (21-83)||(10040299-10040361)
chr2 (21-83)||(28352501-28352563)
chr2 (21-68)||(21239630-21239677)
chr2 (21-68)||(21242180-21242227)
chr2 (1-71)||(22109435-22109504)
chr2 (21-67)||(24504293-24504339)
chr2 (21-83)||(28348676-28348738)
chr2 (21-67)||(31755551-31755597)
chr2 (1-69)||(21239492-21239559)
chr2 (1-69)||(21242042-21242109)
chr2 (1-69)||(23339568-23339635)
chr2 (1-69)||(24274286-24274354)
chr2 (1-68)||(31503332-31503399)
chr2 (1-68)||(31505898-31505965)
chr2 (21-67)||(31503137-31503183)
chr2 (21-67)||(31505703-31505749)
chr2 (1-68)||(41685086-41685153)
chr2 (1-57)||(31503303-31503359)
chr2 (1-57)||(31505869-31505925)
chr2 (1-69)||(44620662-44620729)
chr2 (1-68)||(31503215-31503281)
chr2 (1-35)||(24274365-24274399)
chr2 (1-55)||(28348743-28348797)
chr2 (1-55)||(31755602-31755656)
chr2 (1-69)||(28348808-28348875)
chr2 (1-68)||(10040241-10040306)
chr2 (1-68)||(25035953-25036020)
chr2 (1-68)||(31505781-31505847)
chr2 (3-68)||(31518274-31518341)
chr2 (1-68)||(44620624-44620690)
chr2 (3-68)||(24274328-24274392)
chr2 (1-68)||(31518315-31518384)
chr2 (11-48)||(31518500-31518537)
chr2 (3-55)||(24504344-24504396)
[»] chr6 (33 HSPs)
chr6 (3-89)||(2288328-2288414)
chr6 (3-89)||(15538811-15538897)
chr6 (3-80)||(15686517-15686594)
chr6 (3-69)||(16101992-16102058)
chr6 (3-69)||(16812467-16812533)
chr6 (3-69)||(16829487-16829553)
chr6 (1-85)||(13763942-13764025)
chr6 (3-67)||(29492446-29492510)
chr6 (3-69)||(16804648-16804714)
chr6 (3-85)||(23352115-23352196)
chr6 (1-85)||(221618-221701)
chr6 (1-68)||(23621327-23621394)
chr6 (3-69)||(12595607-12595673)
chr6 (3-68)||(15538952-15539017)
chr6 (21-68)||(8522481-8522528)
chr6 (1-69)||(8522599-8522666)
chr6 (3-85)||(24266659-24266741)
chr6 (1-68)||(16102033-16102100)
chr6 (1-70)||(29848547-29848615)
chr6 (1-69)||(2288247-2288315)
chr6 (1-69)||(13764270-13764337)
chr6 (1-56)||(15539004-15539059)
chr6 (1-68)||(16102073-16102139)
chr6 (3-68)||(15538872-15538937)
chr6 (1-68)||(15538912-15538979)
chr6 (21-68)||(24440865-24440911)
chr6 (1-68)||(13751341-13751411)
chr6 (1-68)||(1639120-1639189)
chr6 (3-68)||(16829528-16829592)
chr6 (3-68)||(23621290-23621354)
chr6 (1-48)||(12389545-12389593)
chr6 (1-69)||(12595686-12595753)
chr6 (1-69)||(15686437-15686504)
[»] chr3 (89 HSPs)
chr3 (3-89)||(16799348-16799434)
chr3 (5-83)||(179831-179909)
chr3 (3-69)||(2035427-2035493)
chr3 (3-69)||(2039168-2039234)
chr3 (3-69)||(2042909-2042975)
chr3 (3-69)||(7631933-7631999)
chr3 (3-69)||(14037826-14037892)
chr3 (3-69)||(14041294-14041360)
chr3 (3-69)||(15010539-15010605)
chr3 (3-69)||(603990-604056)
chr3 (3-69)||(16799487-16799553)
chr3 (1-68)||(14951891-14951958)
chr3 (1-72)||(30206567-30206638)
chr3 (3-69)||(54046463-54046529)
chr3 (1-69)||(39230430-39230497)
chr3 (1-89)||(55292752-55292839)
chr3 (3-68)||(10554073-10554138)
chr3 (3-83)||(6806108-6806187)
chr3 (1-69)||(23396146-23396214)
chr3 (21-83)||(10990059-10990121)
chr3 (21-83)||(17211123-17211185)
chr3 (3-67)||(18958546-18958612)
chr3 (21-83)||(52339188-52339250)
chr3 (21-84)||(1989428-1989491)
chr3 (1-68)||(52339011-52339078)
chr3 (1-69)||(179748-179816)
chr3 (21-85)||(10834528-10834592)
chr3 (1-85)||(23396225-23396308)
chr3 (1-68)||(2035385-2035452)
chr3 (1-68)||(2039126-2039193)
chr3 (1-68)||(2042867-2042934)
chr3 (1-68)||(6806066-6806132)
chr3 (21-67)||(54972884-54972930)
chr3 (21-67)||(54975494-54975540)
chr3 (21-67)||(54978104-54978150)
chr3 (1-69)||(2038853-2038920)
chr3 (1-69)||(2038892-2038959)
chr3 (1-69)||(2038931-2038998)
chr3 (1-69)||(2038970-2039037)
chr3 (1-69)||(2039009-2039076)
chr3 (1-69)||(2039048-2039115)
chr3 (1-69)||(2042594-2042661)
chr3 (1-69)||(2042633-2042700)
chr3 (1-69)||(2042672-2042739)
chr3 (1-69)||(2042711-2042778)
chr3 (1-69)||(2042750-2042817)
chr3 (1-69)||(2042789-2042856)
chr3 (1-69)||(18958625-18958692)
chr3 (1-68)||(2035346-2035412)
chr3 (1-68)||(2039087-2039153)
chr3 (1-68)||(2042828-2042894)
chr3 (1-68)||(14037867-14037934)
chr3 (1-68)||(14041335-14041402)
chr3 (1-68)||(23396067-23396133)
chr3 (1-68)||(54973041-54973108)
chr3 (1-68)||(54973081-54973147)
chr3 (1-68)||(54975651-54975718)
chr3 (1-68)||(54975691-54975757)
chr3 (1-68)||(54978261-54978328)
chr3 (1-68)||(54978301-54978367)
chr3 (21-83)||(6818887-6818948)
chr3 (1-68)||(3395010-3395079)
chr3 (3-68)||(10989884-10989949)
chr3 (3-68)||(14951854-14951918)
chr3 (3-68)||(16799409-16799474)
chr3 (3-68)||(16799528-16799593)
chr3 (1-69)||(2035307-2035374)
chr3 (1-69)||(2038814-2038881)
chr3 (1-69)||(2042555-2042622)
chr3 (1-68)||(14037907-14037973)
chr3 (1-68)||(14041375-14041441)
chr3 (3-69)||(52339053-52339118)
chr3 (3-69)||(54973001-54973066)
chr3 (3-69)||(54975611-54975676)
chr3 (3-69)||(54978221-54978286)
chr3 (3-48)||(6819033-6819078)
chr3 (1-69)||(10554033-10554100)
chr3 (1-69)||(39230469-39230536)
chr3 (1-47)||(6819113-6819160)
chr3 (1-48)||(10990000-10990047)
chr3 (1-68)||(16799449-16799515)
chr3 (21-68)||(23396126-23396173)
chr3 (22-68)||(12856059-12856105)
chr3 (3-69)||(15010461-15010526)
chr3 (11-68)||(18367772-18367830)
chr3 (1-47)||(52339129-52339175)
chr3 (3-68)||(603951-604015)
chr3 (1-29)||(9884-9912)
chr3 (1-69)||(10989922-10989989)
[»] chr1 (48 HSPs)
chr1 (1-89)||(296157-296245)
chr1 (3-69)||(14432753-14432819)
chr1 (3-69)||(20630926-20630992)
chr1 (3-80)||(24087117-24087194)
chr1 (3-69)||(36181224-36181290)
chr1 (3-69)||(2333460-2333527)
chr1 (21-83)||(21181581-21181643)
chr1 (21-83)||(28204768-28204830)
chr1 (21-85)||(18270183-18270247)
chr1 (21-85)||(18274837-18274901)
chr1 (21-84)||(28312068-28312131)
chr1 (21-83)||(293767-293829)
chr1 (3-69)||(22900615-22900681)
chr1 (21-85)||(20901001-20901064)
chr1 (21-68)||(18823462-18823509)
chr1 (21-68)||(20579040-20579087)
chr1 (21-68)||(20586733-20586780)
chr1 (21-72)||(22900711-22900762)
chr1 (23-69)||(37358201-37358247)
chr1 (21-69)||(16400611-16400659)
chr1 (1-68)||(36181265-36181332)
chr1 (21-68)||(45306863-45306910)
chr1 (1-69)||(45306981-45307048)
chr1 (23-85)||(19209407-19209470)
chr1 (1-68)||(20630967-20631034)
chr1 (1-68)||(20631007-20631073)
chr1 (3-69)||(20901133-20901199)
chr1 (3-68)||(14432713-14432778)
chr1 (1-69)||(20631045-20631112)
chr1 (6-69)||(293899-293961)
chr1 (1-68)||(14432672-14432738)
chr1 (1-68)||(18823541-18823608)
chr1 (1-48)||(28204709-28204756)
chr1 (1-68)||(36181305-36181371)
chr1 (1-55)||(19209477-19209531)
chr1 (3-69)||(20901094-20901159)
chr1 (3-48)||(18823521-18823566)
chr1 (3-68)||(20579119-20579183)
chr1 (3-68)||(20586812-20586876)
chr1 (1-46)||(21181522-21181567)
chr1 (1-48)||(18270259-18270306)
chr1 (1-48)||(18274913-18274960)
chr1 (1-68)||(20579158-20579224)
chr1 (1-68)||(20586851-20586917)
chr1 (1-55)||(293834-293888)
chr1 (3-68)||(293939-294005)
chr1 (3-68)||(2333382-2333446)
chr1 (3-48)||(21181407-21181452)
[»] chr5 (44 HSPs)
chr5 (3-80)||(22759169-22759246)
chr5 (21-89)||(27869878-27869946)
chr5 (3-69)||(26361487-26361553)
chr5 (3-80)||(4397426-4397503)
chr5 (3-83)||(24277698-24277777)
chr5 (3-83)||(24384436-24384515)
chr5 (3-69)||(16256336-16256402)
chr5 (3-69)||(16259930-16259996)
chr5 (21-71)||(22469774-22469824)
chr5 (3-69)||(22590094-22590160)
chr5 (3-69)||(22593649-22593715)
chr5 (3-69)||(22597204-22597270)
chr5 (21-72)||(16256432-16256483)
chr5 (21-72)||(16260026-16260077)
chr5 (21-72)||(22590190-22590241)
chr5 (21-72)||(22593745-22593796)
chr5 (21-72)||(22597300-22597351)
chr5 (21-68)||(26495435-26495482)
chr5 (21-68)||(29325745-29325792)
chr5 (21-68)||(43120790-43120837)
chr5 (21-68)||(43124323-43124370)
chr5 (3-68)||(8953084-8953148)
chr5 (1-69)||(26495553-26495620)
chr5 (1-69)||(29325607-29325674)
chr5 (3-69)||(22469854-22469920)
chr5 (1-68)||(24277656-24277722)
chr5 (1-68)||(24384491-24384557)
chr5 (3-69)||(22357962-22358027)
chr5 (3-68)||(22357922-22357986)
chr5 (3-68)||(23671480-23671544)
chr5 (3-69)||(23693108-23693173)
chr5 (21-85)||(22358059-22358123)
chr5 (1-69)||(22759089-22759156)
chr5 (21-68)||(24277636-24277683)
chr5 (21-68)||(24384530-24384577)
chr5 (3-69)||(22759013-22759078)
chr5 (3-69)||(23671518-23671583)
chr5 (3-68)||(16256297-16256361)
chr5 (3-48)||(21495001-21495046)
chr5 (3-68)||(22758973-22759038)
chr5 (4-69)||(23693186-23693250)
chr5 (3-68)||(26361407-26361472)
chr5 (3-48)||(27869822-27869867)
chr5 (1-69)||(27869705-27869771)
[»] scaffold0021 (2 HSPs)
scaffold0021 (3-69)||(134314-134380)
scaffold0021 (3-68)||(134274-134339)
[»] scaffold0500 (4 HSPs)
scaffold0500 (1-72)||(11816-11887)
scaffold0500 (1-69)||(11737-11805)
scaffold0500 (1-68)||(11697-11764)
scaffold0500 (3-68)||(11779-11843)
[»] scaffold0381 (3 HSPs)
scaffold0381 (1-72)||(14075-14146)
scaffold0381 (1-68)||(14035-14102)
scaffold0381 (1-68)||(13995-14062)
[»] scaffold0026 (6 HSPs)
scaffold0026 (3-83)||(20788-20868)
scaffold0026 (1-68)||(20883-20950)
scaffold0026 (3-83)||(23866-23946)
scaffold0026 (1-68)||(20843-20910)
scaffold0026 (1-68)||(20963-21029)
scaffold0026 (1-68)||(23921-23988)
[»] scaffold0860 (2 HSPs)
scaffold0860 (3-72)||(148-217)
scaffold0860 (1-69)||(230-297)
[»] scaffold0609 (4 HSPs)
scaffold0609 (3-72)||(4313-4382)
scaffold0609 (3-69)||(4473-4538)
scaffold0609 (3-68)||(4357-4421)
scaffold0609 (1-69)||(4434-4501)
[»] scaffold0338 (3 HSPs)
scaffold0338 (3-85)||(4072-4153)
scaffold0338 (1-68)||(3952-4018)
scaffold0338 (1-68)||(4030-4096)
[»] scaffold0004 (3 HSPs)
scaffold0004 (3-83)||(59151-59229)
scaffold0004 (1-69)||(59320-59388)
scaffold0004 (1-68)||(205353-205422)
[»] scaffold0126 (2 HSPs)
scaffold0126 (3-83)||(5685-5764)
scaffold0126 (1-55)||(5752-5806)
[»] scaffold0635 (2 HSPs)
scaffold0635 (21-83)||(6709-6771)
scaffold0635 (1-68)||(6764-6829)
[»] scaffold0413 (2 HSPs)
scaffold0413 (3-83)||(10554-10633)
scaffold0413 (1-68)||(10609-10675)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-81)||(50684-50763)
scaffold0042 (3-69)||(50774-50840)
[»] scaffold1276 (1 HSPs)
scaffold1276 (21-72)||(128-179)
[»] scaffold0034 (3 HSPs)
scaffold0034 (21-72)||(35023-35074)
scaffold0034 (1-69)||(34886-34953)
scaffold0034 (1-48)||(34964-35011)
[»] scaffold0825 (2 HSPs)
scaffold0825 (21-83)||(1951-2013)
scaffold0825 (3-54)||(1894-1945)
[»] scaffold0556 (2 HSPs)
scaffold0556 (23-85)||(9546-9608)
scaffold0556 (3-69)||(9618-9684)
[»] scaffold0141 (2 HSPs)
scaffold0141 (21-67)||(32741-32787)
scaffold0141 (1-48)||(32838-32885)
[»] scaffold0109 (4 HSPs)
scaffold0109 (21-83)||(1994-2056)
scaffold0109 (3-68)||(2244-2309)
scaffold0109 (1-69)||(2204-2271)
scaffold0109 (1-55)||(2061-2115)
[»] scaffold0049 (2 HSPs)
scaffold0049 (21-67)||(82025-82071)
scaffold0049 (1-48)||(81927-81974)
[»] scaffold0044 (2 HSPs)
scaffold0044 (24-69)||(6198-6243)
scaffold0044 (1-55)||(6136-6190)
[»] scaffold1098 (2 HSPs)
scaffold1098 (3-83)||(1050-1130)
scaffold1098 (1-68)||(1105-1172)
[»] scaffold0151 (6 HSPs)
scaffold0151 (3-83)||(2106-2185)
scaffold0151 (3-83)||(8950-9029)
scaffold0151 (1-68)||(2161-2227)
scaffold0151 (1-68)||(9005-9071)
scaffold0151 (3-68)||(2200-2264)
scaffold0151 (3-68)||(9044-9108)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-85)||(223695-223759)
[»] scaffold0003 (5 HSPs)
scaffold0003 (23-83)||(137468-137528)
scaffold0003 (1-68)||(137562-137629)
scaffold0003 (3-68)||(137680-137745)
scaffold0003 (1-55)||(137535-137589)
scaffold0003 (3-48)||(81278-81323)
[»] scaffold0491 (1 HSPs)
scaffold0491 (3-69)||(10466-10531)
[»] scaffold0016 (1 HSPs)
scaffold0016 (22-83)||(120021-120082)
[»] scaffold0107 (2 HSPs)
scaffold0107 (21-69)||(2777-2825)
scaffold0107 (1-55)||(2830-2884)
[»] scaffold0586 (3 HSPs)
scaffold0586 (28-83)||(1488-1543)
scaffold0586 (3-55)||(1554-1606)
scaffold0586 (3-68)||(1581-1646)
[»] scaffold0008 (8 HSPs)
scaffold0008 (1-68)||(13079-13146)
scaffold0008 (1-67)||(13119-13185)
scaffold0008 (1-61)||(13237-13296)
scaffold0008 (1-68)||(12517-12583)
scaffold0008 (1-68)||(12596-12662)
scaffold0008 (1-68)||(13198-13263)
scaffold0008 (1-69)||(13159-13226)
scaffold0008 (4-48)||(124965-125009)
[»] scaffold0447 (1 HSPs)
scaffold0447 (21-83)||(13898-13959)
[»] scaffold0383 (1 HSPs)
scaffold0383 (21-83)||(11893-11954)
[»] scaffold0058 (4 HSPs)
scaffold0058 (3-69)||(40147-40212)
scaffold0058 (1-69)||(40184-40251)
scaffold0058 (3-88)||(40304-40388)
scaffold0058 (6-68)||(40267-40328)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-41)||(1417-1457)
scaffold0131 (3-68)||(1430-1494)
[»] scaffold0395 (3 HSPs)
scaffold0395 (21-68)||(9065-9112)
scaffold0395 (3-53)||(8850-8900)
scaffold0395 (3-56)||(8930-8983)
[»] scaffold0216 (1 HSPs)
scaffold0216 (3-85)||(21233-21314)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-48)||(524714-524759)
[»] scaffold0273 (1 HSPs)
scaffold0273 (11-68)||(6615-6674)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-48)||(165667-165714)
[»] scaffold2046 (1 HSPs)
scaffold2046 (1-68)||(91-161)
[»] scaffold0180 (1 HSPs)
scaffold0180 (11-68)||(29340-29398)
[»] scaffold0106 (1 HSPs)
scaffold0106 (11-68)||(20744-20802)
[»] scaffold0335 (1 HSPs)
scaffold0335 (3-48)||(3675-3720)
[»] scaffold0165 (1 HSPs)
scaffold0165 (3-48)||(17929-17974)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-48)||(3036-3084)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-29)||(20775-20803)


Alignment Details
Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16278704 - 16278792
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16278704 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 16278792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 53388084 - 53388170
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53388084 atgccctggaatgccttgtcgttcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgttacc 53388170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33848548 - 33848460
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33848548 ttatgccctggaatgtcttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatagaattggtgctacc 33848460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9388467 - 9388554
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9388467 ttatgccctggaatgccttgtcattcaact-gttgggggcttatgccccggaatgcgtagtcattcaacacgatggaaatggtgctacc 9388554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16359180 - 16359114
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16359180 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 16359114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 28382540 - 28382474
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28382540 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 28382474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 15280486 - 15280552
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15280486 atgccctggaacgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 15280552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 15989821 - 15989740
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  15989821 atgccctggaatgc-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggtgc 15989740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 47127191 - 47127257
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47127191 atgccctggaatgccttgtcattcaaattgtcgggggcttatgccccggaatgcttagtcattcaac 47127257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13877774 - 13877703
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  13877774 ttatgccctggaatgccttgtcactcaaattgttgagggcttatgccctggaatgcttagtcattcaacacg 13877703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 27027611 - 27027532
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  27027611 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 27027532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13881433 - 13881362
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||||||||||||||||    
T  13881433 ttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctagattgcttagtcattcaacacg 13881362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 286805 - 286739
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  286805 atgccctggaatgctttgtcattcaaattgttgggggcttatgccccgaaatacttagtcattcaac 286739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 10313430 - 10313366
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10313430 atgccctgggatgc-ttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 10313366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 20899770 - 20899849
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||| || |||||||    
T  20899770 atgccctggaatgccttgtcattcaact-gttgagggcttatgccctggaatgcttagtcattcaacacgttgaaaatggt 20899849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24047877 - 24047960
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||| |||||||||||||||||||| | || |||||||||    
T  24047877 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccccagaatgcttagtcattcaacaagttgaaaatggtgc 24047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 15242604 - 15242666
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  15242604 tcattcaaattgttgggggcttatgccccggaatgcttagtcatttaacacgttgaaaatggt 15242666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 16278588 - 16278654
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||    
T  16278588 atgccctggaatgccttgtcattcaaaatgttgggggcttacgctccggaatgctttgtcattcaac 16278654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 56116291 - 56116353
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  56116291 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatggt 56116353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 21190126 - 21190195
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||| |||||||||||||    
T  21190126 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctagaatgcttggtcattcaacacg 21190195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15990102 - 15990035
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  15990102 ttatgccctggaatgcctcgtcattcaaactgttgagggcttatgccctggaatgctttgtcattcaa 15990035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 55503188 - 55503234
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  55503188 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 55503234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 6511458 - 6511394
Alignment:
Q  4 tgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||  || ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6511458 tgccctggaatgt-ttatcattcaaattgttgggggattatgccccggaatgcttagtcattcaac 6511394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18221149 - 18221088
Alignment:
Q  22 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||    
T  18221149 cattcaaattgttgggggctcatgccccggaatgctcagtcattcaacacgttgaaaatggt 18221088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 33684910 - 33684989
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || |||||||||||||||||||||||||||  ||||||||||||||||||||| | || |||||||    
T  33684910 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccatggaatgcttagtcattcaacatgttgaaaatggt 33684989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33848626 - 33848559
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  33848626 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 33848559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41791406 - 41791339
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  41791406 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 41791339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3337055 - 3336989
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  3337055 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 3336989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 4170622 - 4170576
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4170622 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 4170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 14698314 - 14698268
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  14698314 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 14698268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 14942753 - 14942817
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||  || |||||||||||||||||||||||||| || ||||||||||||||||||    
T  14942753 atgccctggaatgt-ttatcattcaaattgttgggggcttatgcacctgaatgcttagtcattcaa 14942817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 56115998 - 56116063
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||| ||||||||| |||||||||    
T  56115998 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccctggaatgctttgtcattcaa 56116063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 41791268 - 41791220
Alignment:
Q  21 tcattcaaattgttgggggcttatg-ccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41791268 tcattcaaattgttgggggcttatgcccccggaatgcttagtcattcaa 41791220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 286847 - 286780
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| | ||| ||||| |||||| ||||||||| |||||||||    
T  286847 ttatgccctggaatgctttgtcattcaaactattgagggctcatgccctggaatgctttgtcattcaa 286780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15448483 - 15448549
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||| ||| ||||||||    
T  15448483 ttatgccctggaatgccttgtcattcagattgttgagggctcatgccctggaatg-ttaatcattcaa 15448549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15449806 - 15449872
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  15449806 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 15449872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16278507 - 16278573
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||| |||||||| ||||| |||||| ||||||||| |||||||||    
T  16278507 ttatgccctggaatgctttgtcattc-aattgttgagggctcatgccctggaatgctttgtcattcaa 16278573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16278665 - 16278731
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||| | |||||||||    
T  16278665 ttatgccctggaatgctttgtcattcaa-ttgttgagggcttatgccctggaatgccttgtcattcaa 16278731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16359222 - 16359155
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  16359222 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 16359155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 27027652 - 27027587
Alignment:
Q  2 tatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  27027652 tatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 27027587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8710642 - 8710573
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| ||||||||||||||||||||||||  ||||| |||||||| ||||||||| ||||||||    
T  8710642 ttatgccctgtgaatgccttgtcattcaaattgttaagggctcatgccccgtgaatgcttaatcattcaa 8710573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 16278548 - 16278613
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  16278548 atgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 16278613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 56115918 - 56115983
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || |||||||||| | ||||||||| |||||||||    
T  56115918 atgccctggaacgccttgtcgttcaaattggtgagggcttatgctctggaatgctttgtcattcaa 56115983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 6511599 - 6511551
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  6511599 tcattcaaattgttgagggcttatgccctggaatgctttgtcattcaac 6511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15242466 - 15242533
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  15242466 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 15242533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15990062 - 15989995
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| |||||| ||| |||||||||    
T  15990062 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaac 15989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28382620 - 28382553
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  28382620 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 28382553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 56116036 - 56116103
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| |||||||||||| |||||| ||| |||||||||    
T  56116036 ttatgccctggaatgctttgtcattcaatctgttgagggcttatgccctggaatg-ttaatcattcaac 56116103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 286886 - 286820
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  286886 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 286820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4170720 - 4170654
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  4170720 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 4170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6511501 - 6511435
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| |||||  ||||| |||||| ||| ||||||||    
T  6511501 ttatgccctggaatgccttgtcattcaaactgttgagggctcgtgccctggaatgttta-tcattcaa 6511435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14698412 - 14698346
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  14698412 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 14698346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27027738 - 27027691
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  27027738 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccc 27027691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47127149 - 47127216
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  ||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  47127149 ttatgccctggaatgctatgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 47127216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 4170796 - 4170742
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||||    
T  4170796 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 4170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 10313508 - 10313443
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| |||||||||||| ||||| |||||| ||| | ||||||||| ||||||||||    
T  10313508 atgccctggaatgctttgtcattcaaactgttgagggcttgtgctctggaatgctt-gtcattcaac 10313443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 14698488 - 14698434
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||||    
T  14698488 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 14698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 55503129 - 55503183
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  55503129 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 55503183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 16359259 - 16359195
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  16359259 atgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 16359195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 24047840 - 24047903
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||| |||||| ||| ||||||||    
T  24047840 atgccctggaatgctttgtcattc-aattgttgagggcttatgccctggaatgttta-tcattcaa 24047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 53388044 - 53388097
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgc 56  Q
    |||||||||||||| |||||||||||| ||||| ||||| |||||| |||||||    
T  53388044 atgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgc 53388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 31131813 - 31131845
Alignment:
Q  36 ggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||||||||||||    
T  31131813 ggggcttatgccccggaatgcttagtcattcaa 31131845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14942672 - 14942719
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||||| | ||| ||||| ||||||    
T  14942672 ttatgccctggaatgccttgtcattcaaactattgagggctcatgccc 14942719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15989984 - 15989930
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    |||||||||||||||| |||||||| ||| ||||| ||| |||||||| ||||||    
T  15989984 ttatgccctggaatgctttgtcattaaaaatgttgagggtttatgccctggaatg 15989930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 56116156 - 56116221
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||| |||||||| ||||||||| || ||||| |||||| |||||| ||| |||||||||    
T  56116156 atgccctggaacgccttgtcgttcaaattggtgagggctcatgccctggaatg-ttaatcattcaac 56116221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3337117 - 3337084
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgtt 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  3337117 ttatgccctagaatgccttgtcattcaaattgtt 3337084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 6511538 - 6511474
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||  || ||||||||| ||||| |||||||||||| ||||||| | |||||||||    
T  6511538 atgccctggaatgt-ttatcattcaaactgttgagggcttatgccctggaatgccttgtcattcaa 6511474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 85; Significance: 1e-40; HSPs: 9)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8749 - 8661
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8749 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgaaggaaatggtgctacc 8661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 11357 - 11423
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11357 atgccttggaatgccttgtcattcaaattgttgggggcttatgccccggactgcttagtcattcaac 11423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11237 - 11304
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  11237 ttatgccctggaatgccttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 11304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8904 - 8838
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||| |||||||| ||||| |||||| ||||||||| |||||||||    
T  8904 ttatgccctggaatgctttgtcattc-aattgttgagggctcatgccctggaatgctttgtcattcaa 8838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11276 - 11342
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  11276 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 11342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11198 - 11265
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||| ||  |||| |||||||||||| ||||||| | ||||||||||    
T  11198 ttatgccctggaatgccttgtcattc-aaccgttgagggcttatgccctggaatgccttgtcattcaac 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11315 - 11382
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||  ||||||| | |||||||||    
T  11315 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccttggaatgccttgtcattcaa 11382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 8824 - 8771
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    |||||||||||||| ||||||||| |||||||| ||||| |||||| ||||||||    
T  8824 atgccctggaatgctttgtcattc-aattgttgagggctcatgccctggaatgct 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 8941 - 8877
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||   || | |||||||||||| ||||||||| |||||||||    
T  8941 atgccctggaatgctttgtcattcaacc-gtggagggcttatgccctggaatgctttgtcattcaa 8877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17795038 - 17794950
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17795038 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgcctcggaatgcttagtcattcaacacgatggaaatggtgctacc 17794950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22145826 - 22145892
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22145826 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 22145892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 44523254 - 44523320
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44523254 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 44523320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22059818 - 22059884
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22059818 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccgaaatgcttagtcattcaac 22059884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20459941 - 20459858
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  20459941 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgcctcggaatgcttagtcattcaacacgttgaaaatggtgc 20459858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21861692 - 21861775
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  21861692 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccctggaatgcttagtcattcaacacgttgaaaatggtgc 21861775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38186148 - 38186230
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtg 84  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  38186148 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacatgttgaaaatggtg 38186230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 43111973 - 43111894
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || |||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||    
T  43111973 atgccctggaatgt-ttatcattcaaattgttgggggcttatcccccggaatgcttagtcattcaacacgttgaaaatggt 43111894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15004838 - 15004909
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||| | |||||||||||||||||||||||    
T  15004838 ttatgccctggaatgctttgtcattcaaattgttgagggtttatgctctggaatgcttagtcattcaacacg 15004909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17614675 - 17614609
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  17614675 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 17614609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 19881790 - 19881713
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatg 81  Q
    |||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  19881790 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccacggaatgcttagtcattcaacacgttgaaaatg 19881713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22145744 - 22145811
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  22145744 ttatgccctggaatgctttgtcattcaaactgttgagggcttatgccctggaatgctttgtcattcaa 22145811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 28853572 - 28853525
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28853572 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 28853525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 45135430 - 45135477
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45135430 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 45135477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 363661 - 363599
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || || |||||||    
T  363661 tcattcaaattgttgggggcttatgccctggaatgcttagtcattcaacccgttgaaaatggt 363599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 44431538 - 44431476
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||    
T  44431538 tcattcaaattgttgagggcttatgccccggaatgcttagtcattcatcacgttgaaaatggt 44431476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 32949607 - 32949540
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacac 71  Q
    |||||||||||||  || ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  32949607 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccctagaatgcttagtcattcaacac 32949540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45135292 - 45135359
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  45135292 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 45135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 17614579 - 17614528
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  17614579 tcattcaaattgttgggggcttacgctccggaatgcttagtcattcaacacg 17614528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19881832 - 19881766
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  19881832 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 19881766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19882029 - 19881962
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||||||||||||| | |||||||||    
T  19882029 ttatgccctagaatgcctcgtcattcaaactgttgagggcttatgccccggaatgccttgtcattcaa 19881962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 362289 - 362351
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||||||| || |||||||    
T  362289 tcattcaaattgttgggggcttaagccccggaatacctagtcattcaacacgttgaaaatggt 362351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7301419 - 7301485
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||| | |||||||||    
T  7301419 ttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccctggaatgccttgtcattcaa 7301485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 21415658 - 21415713
Alignment:
Q  28 aattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  21415658 aattgctgggggcttatgccctggaatgcttagtcattcaacacgttgaaaatggt 21415713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22145784 - 22145851
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  22145784 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 22145851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28853670 - 28853604
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||| |||||| ||| ||||||||    
T  28853670 ttatgccctggaatgccttgtcattcaatttgttgagggctcatgccctggaatg-ttaatcattcaa 28853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32949649 - 32949583
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  32949649 ttatgccttggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 32949583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43112015 - 43111949
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  43112015 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 43111949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 363758 - 363693
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||| ||| ||||| |||||||||    
T  363758 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccctggactgctttgtcattcaa 363693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 6608777 - 6608822
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattc 66  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  6608777 tcattcaaagtgttgggggcttatgcctcggaatgcttagtcattc 6608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 44431831 - 44431766
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||| ||||| |||||||| ||||||||| || |||||||||||| ||||||||| |||||||||    
T  44431831 atgccttggaacgccttgtcgttcaaattggtgagggcttatgccctggaatgctttgtcattcaa 44431766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 7301673 - 7301721
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||  | ||||||||||||||||||||||||||||||||||    
T  7301673 tcattcaaatttgttggggcttatgccccggaatgcttagtcattcaac 7301721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17795116 - 17795049
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||  |||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  17795116 ttatgccctggaatgttttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 17795049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 20454310 - 20454246
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    ||||||||||| |  ||||||||||||| | ||||||||||||||||||||| || |||||||||    
T  20454310 tcattcaaattatcaggggcttatgccctgaaatgcttagtcattcaacacgttgaaaatggtgc 20454246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6608679 - 6608745
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  6608679 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 6608745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19881989 - 19881923
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||| |||||| ||| ||||||||    
T  19881989 ttatgccccggaatgccttgtcattcaaattgtcgagggctcatgccctggaatgttta-tcattcaa 19881923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44431715 - 44431648
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||| || |||||||||||||||  | || |||||||||||| ||||||||| |||||||||    
T  44431715 ttatgccctgtaacgccttgtcattcaaagcggtgagggcttatgccctggaatgctttgtcattcaa 44431648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 6608603 - 6608657
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||||    
T  6608603 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 6608657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 24708133 - 24708198
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||| ||||||  ||||||||||   |||| |||||||||||||||||||||||||||||||||    
T  24708133 atgccctagaatgctatgtcattcaacc-gttgagggcttatgccccggaatgcttagtcattcaac 24708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44431597 - 44431543
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  44431597 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 44431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7301458 - 7301525
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||| | |||||| ||| |||||||||    
T  7301458 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatg-ttaatcattcaac 7301525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7301536 - 7301603
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||| | |||||| ||| |||||||||    
T  7301536 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatg-ttaatcattcaac 7301603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20460019 - 20459952
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||| || |||||  |||||||||||  |||||||| ||||||||||    
T  20460019 ttatgccctggaatgctttgtcattc-aactgttgacggcttatgccctagaatgctttgtcattcaac 20459952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 21415595 - 21415647
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  21415595 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 21415647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44431793 - 44431726
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  44431793 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 44431726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19881911 - 19881845
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||||  |||||| ||| ||||||||    
T  19881911 ttatgccctggaatgctttttcattcaaactgttgagggcttatgccatggaatgttta-tcattcaa 19881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22145705 - 22145771
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  ||||||| || | |||| |||||||||||| ||||||||| |||||||||    
T  22145705 ttatgccctggaatgctatgtcatttaact-gttgagggcttatgccctggaatgctttgtcattcaa 22145771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 17272816 - 17272853
Alignment:
Q  31 tgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  17272816 tgttgggggtttatgctccggaatgcttagtcattcaa 17272853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 21415555 - 21415620
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||| ||||||||  |||| ||||| |||||| ||||||| | |||||||||    
T  21415555 atgccctggaatgctttgccattcaaaccgttgagggctcatgccctggaatgccttgtcattcaa 21415620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22059699 - 22059766
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||| || ||||| |||||||||||| || |||||  ||||||||||    
T  22059699 ttatgccctggaatgctatgtcattc-aactgttgagggcttatgcccagggatgctatgtcattcaac 22059766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44431675 - 44431608
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| | |||| ||| |||||||||    
T  44431675 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctgaaatg-ttaatcattcaac 44431608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 13395948 - 13396034
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13395948 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgttacc 13396034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17506227 - 17506315
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  17506227 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgtcccggaatgcttagtcattcaacaggatggaaatggtgttacc 17506315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17546987 - 17546899
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  17546987 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgtcccggaatgcttagtcattcaacaggatggaaatggtgttacc 17546899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 13733930 - 13733996
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13733930 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 13733996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 38827863 - 38827797
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38827863 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 38827797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 48784912 - 48784846
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48784912 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 48784846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 13850089 - 13850168
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  13850089 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 13850168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14189442 - 14189525
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  14189442 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaacgcctagtcattcaacacgttggaaatggtgc 14189525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 14192216 - 14192276
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatg 81  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  14192216 tcattcaaattgttgggggcttatgccccggaatgcctagtcattcaacacgttggaaatg 14192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13255496 - 13255414
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtg 84  Q
    |||||||||||||||  || || |||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  13255496 ttatgccctggaatgt-ttatctttcaaattgttgagggcttatgccccggaatgcttagtcattcaacacgttgaaaatggtg 13255414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17506111 - 17506177
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||||    
T  17506111 atgccctggaatgccttgtcattcaaaatgttgggggcttacgtcccggaatgctttgtcattcaac 17506177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17547103 - 17547037
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||||    
T  17547103 atgccctggaatgccttgtcattcaaaatgttgggggcttacgtcccggaatgctttgtcattcaac 17547037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35366005 - 35365924
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||||||| | || | |||||||||| | | ||||||||||||||||||||||||||||||||    
T  35366005 ttatgccctggaatgccttgtcattcaactggt-gagggcttatgctctgcaatgcttagtcattcaacacgatggaaatggt 35365924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 48743308 - 48743227
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||| | || |||||||||    
T  48743308 atgccctggaatgctttgtcattcagattgttgggg-cttatgccccagaatgcttagtcattcaacatgttgaaaatggtgc 48743227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 711049 - 711110
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatgg 82  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  711049 tcattcaaattgttgggggcttatgccctggaatgcttagtcattcaacacgttgaaaatgg 711110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 8775920 - 8775873
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8775920 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 8775873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13395866 - 13395933
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  13395866 ttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaa 13395933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 124632 - 124678
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  124632 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 16573137 - 16573075
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||    
T  16573137 tcattcaaattgttgggggctcatgcccaggaatgcttagtcattcaacacgttgaaaatggt 16573075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 16592525 - 16592587
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| || |||||||    
T  16592525 tcattcaaattgttgggggctcatgcccaggaatgcttagtcattcaacacgttgaaaatggt 16592587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8776058 - 8775991
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  8776058 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 8775991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16006152 - 16006085
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  16006152 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 16006085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 47976061 - 47976121
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatg 81  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||||    
T  47976061 tcattcaaattgttgggggcttatgccccggaatgattagtaattcaacacgttgaaaatg 47976121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16573236 - 16573169
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||| ||||||||| |||||||||    
T  16573236 ttatgccctggaatgtcttgtcattcaacctgttgagggcttatgccctggaatgctttgtcattcaa 16573169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16592426 - 16592493
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||| ||||||||||||  ||||| |||||||||||| ||||||||| |||||||||    
T  16592426 ttatgccctggaatgtcttgtcattcaacctgttgagggcttatgccctggaatgctttgtcattcaa 16592493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 13407786 - 13407736
Alignment:
Q  22 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13407786 cattcaaattgttgggggctcatgccccggaatgctcagtcattcaacacg 13407736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 21743808 - 21743854
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21743808 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 21743854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13849929 - 13849996
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| |||||||||    
T  13849929 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatg-ttaatcattcaac 13849996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16006074 - 16006007
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  16006074 ttataccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 16006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48784992 - 48784925
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  48784992 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 48784925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48785031 - 48784964
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  48785031 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 48784964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48785070 - 48785003
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  48785070 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 48785003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13395827 - 13395893
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  13395827 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 13395893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 16005936 - 16005889
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16005936 tcattcaaattgttgggagcttatgccccggaatgtttagtcattcaa 16005889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17506188 - 17506254
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||| | |||||||||    
T  17506188 ttatgccctggaatgctttgtcattcaa-ttgttgagggcttatgccctggaatgccttgtcattcaa 17506254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17547026 - 17546960
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||| | |||||||||    
T  17547026 ttatgccctggaatgctttgtcattcaa-ttgttgagggcttatgccctggaatgccttgtcattcaa 17546960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4993244 - 4993190
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||    
T  4993244 ttatgccctggaatgccttgccattcaaattgttgagggctcatgccctggaatg 4993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 14189366 - 14189431
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||| |||||||||||||||||| || ||| |||||||||||| ||||||||| ||||||||||    
T  14189366 atgccctagaatgccttgtcattcaactt-ttgagggcttatgccctggaatgctttgtcattcaac 14189431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48743350 - 48743284
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||| |||||||||||||| ||| | ||||| |||||| ||||||||| ||||||||    
T  48743350 ttatgccctggaatcccttgtcattcaaactgtggagggctcatgccctggaatgctttgtcattca 48743284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 13395908 - 13395973
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  13395908 atgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 13395973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 13850049 - 13850113
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  13850049 atgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 13850113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 21065471 - 21065536
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||| ||||||||  |||||||||    
T  21065471 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccctggaatgctctgtcattcaa 21065536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11660829 - 11660747
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || |||||||| |||||  |||||||||||| |||||| |||||||||||||||| || |||||||||    
T  11660829 ttatgccctggaatgt-ttatcattcaa-ttgtttagggcttatgccctggaatgtttagtcattcaacacgttgaaaatggtgc 11660747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13395788 - 13395855
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  13395788 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 13395855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14189324 - 14189392
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||||||  |||||| | ||||||||||    
T  14189324 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctagaatgccttgtcattcaac 14189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 21735541 - 21735601
Alignment:
Q  22 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatgg 82  Q
    ||||||||| |||||||||| |||||| |||||||| |||||||||||||| || ||||||    
T  21735541 cattcaaatcgttgggggctcatgccctggaatgctcagtcattcaacacgttgaaaatgg 21735601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48785109 - 48785042
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  48785109 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 48785042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 4993106 - 4993059
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||    
T  4993106 tcattcaaattgtagggggcttatgccaaggaatgcttagtcattcaa 4993059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13850007 - 13850074
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| || |||||||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  13850007 ttatgccctagattgccttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 13850074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14192158 - 14192223
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||||| || || || ||||||||||||||||||| ||| ||||||||    
T  14192158 ttatgccctggaatgccttgtcattc-aactggtgagggcttatgccccggaatgttta-tcattcaa 14192223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21743710 - 21743776
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  21743710 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 21743776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 124573 - 124627
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  124573 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 124627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 709723 - 709777
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||| ||| ||||| ||||| |||||| ||||||    
T  709723 ttatgccctggaatgccttgtcatttaaactgttgagggctcatgccctggaatg 709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 21743634 - 21743688
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||||    
T  21743634 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 21743688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 709657 - 709702
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgc 46  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||    
T  709657 ttatgccctggaattccttgtcattcaaattgttgagggctcatgc 709702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 13865424 - 13865485
Alignment:
Q  22 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||| |||| |||||||||| |||||||| | ||| || |||||||    
T  13865424 cattcaaattgttgggggctcatgcgccggaatgctcagtcattcgatacgttgaaaatggt 13865485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40555765 - 40555834
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||  | ||||||||| ||||||||    
T  40555765 ttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgccttgtgaatgcttaatcattcaa 40555834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13255810 - 13255745
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||| || ||||| |||||||||||| |||||| ||| ||||||||    
T  13255810 ttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctggaatgttta-tcattcaa 13255745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16005996 - 16005941
Alignment:
Q  1 ttatgccctggaat-gccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    |||||||||||||| ||||||||||||||  ||||||||||| |||||| ||||||    
T  16005996 ttatgccctggaattgccttgtcattcaatctgttgggggctcatgccctggaatg 16005941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22122769 - 22122816
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgcc 47  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  22122769 ttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgcc 22122816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38827983 - 38827916
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||  ||||| ||||| ||||||  ||||| || |||||||||    
T  38827983 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctagaatgattcgtcattcaa 38827916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40555970 - 40556017
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgcc 47  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  40555970 ttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgcc 40556017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 11660866 - 11660803
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||| |||||| ||| ||||||||    
T  11660866 atgccctggaatgctttgtcattc-aattgttgagagcttatgccctggaatgttta-tcattcaa 11660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 8757416 - 8757452
Alignment:
Q  11 gaatgccttgtcattcaaattgttgggggcttatgcc 47  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  8757416 gaatgccttgtcattcaaattgttgagggctcatgcc 8757452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 12757143 - 12757175
Alignment:
Q  36 ggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||| |||||||||||||||||    
T  12757143 ggggcttatgccccgaaatgcttagtcattcaa 12757175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13255771 - 13255705
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||  || |||||||| |||||| |||||||||||| ||||||||| | ||||||||    
T  13255771 ttatgccctggaatgt-ttatcattcaa-ttgttgagggcttatgccctggaatgctttggcattcaac 13255705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14192119 - 14192186
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||| |||||| |||||||||||   |||| |||||||||||| ||||||| | ||||||||||    
T  14192119 ttatgccctagaatgctttgtcattcaacc-gttgagggcttatgccctggaatgccttgtcattcaac 14192186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21065509 - 21065576
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  ||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  21065509 ttatgccctggaatgctctgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 21065576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 23442368 - 23442324
Alignment:
Q  4 tgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||| |||||||| ||||||||| || ||||||||||||    
T  23442368 tgccctggaacgccttgtcgttcaaattggtgagggcttatgccc 23442324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20591472 - 20591560
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20591472 ttatgccctggaatgccatgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgttacc 20591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23339646 - 23339734
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  23339646 ttatgccctggaatgtcttgtcattcaaattgttgggggcttatgccacggaatgcttagtcattcaacacgatggaattggtgctacc 23339734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44620651 - 44620583
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44620651 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 44620583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 12628195 - 12628261
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12628195 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 12628261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 25036073 - 25036139
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25036073 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 25036139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 41685128 - 41685194
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41685128 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 41685194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 23374947 - 23374868
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  23374947 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacaagttgaaaatggt 23374868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 24275717 - 24275784
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacac 71  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24275717 atgccctggaatgtcta-tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacac 24275784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 10040299 - 10040361
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||    
T  10040299 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcatcacgttgaaaatggt 10040361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 28352563 - 28352501
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  28352563 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatggt 28352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 21239630 - 21239677
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21239630 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 21239677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 21242180 - 21242227
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21242180 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 21242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22109504 - 22109435
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacac 71  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||||||||||||||||    
T  22109504 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgcttagtcattcaacac 22109435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 24504339 - 24504293
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24504339 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 24504293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 28348738 - 28348676
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||    
T  28348738 tcattcaaattgttgggggcttatgccccggaatgattagtcattcaacccgttgaaaatggt 28348676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 31755597 - 31755551
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31755597 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 31755551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21239492 - 21239559
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  21239492 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 21239559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21242042 - 21242109
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  21242042 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 21242109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23339568 - 23339635
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  23339568 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 23339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24274286 - 24274354
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||| |||| |||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  24274286 ttatgccctcgaataccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 24274354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31503399 - 31503332
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||| | |||||||||    
T  31503399 ttatgccctggaatgccttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaa 31503332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31505965 - 31505898
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||| | |||||||||    
T  31505965 ttatgccctggaatgccttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaa 31505898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 31503183 - 31503137
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31503183 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 31503137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 31505749 - 31505703
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31505749 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 31505703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41685086 - 41685153
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  41685086 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 41685153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31503359 - 31503303
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||||    
T  31503359 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 31503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31505925 - 31505869
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgct 57  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||||    
T  31505925 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 31505869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44620729 - 44620662
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||| || ||||| |||||||||||| ||||||||  ||||||||||    
T  44620729 ttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctggaatgctatgtcattcaac 44620662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31503281 - 31503215
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  31503281 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 31503215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24274365 - 24274399
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttg 35  Q
    |||||||||||||||||||||||||||||||||||    
T  24274365 ttatgccctggaatgccttgtcattcaaattgttg 24274399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28348797 - 28348743
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  28348797 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 28348743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31755656 - 31755602
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  31755656 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 31755602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28348875 - 28348808
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  28348875 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 28348808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10040241 - 10040306
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||||| || ||||| ||||| |||||| |||||| ||| ||||||||    
T  10040241 ttatgccctggaatgccttgtcattc-aactgttgagggctcatgcccaggaatgttta-tcattcaa 10040306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25035953 - 25036020
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||  ||||| ||||| ||||||  ||||| || |||||||||    
T  25035953 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctagaatgattcgtcattcaa 25036020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31505847 - 31505781
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||| ||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  31505847 ttatgccatggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 31505781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31518341 - 31518274
Alignment:
Q  3 atgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||| ||||||||||||||||||| ||||| ||||| |||||| | ||||||||| ||||||||    
T  31518341 atgccctgtgaatgccttgtcattcaaactgttgagggctcatgccctgtgaatgcttaatcattcaa 31518274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44620690 - 44620624
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||| | |||||||||    
T  44620690 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgccttgtcattcaa 44620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 24274328 - 24274392
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||||| |  ||| |||||||||||| ||||||| | |||||||||    
T  24274328 atgccctggaatgctttgtcattcaacta-ttgagggcttatgccctggaatgccttgtcattcaa 24274392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31518384 - 31518315
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| ||||||||||||||||||| ||||| ||||| |||||| | |||||| | |||||||||    
T  31518384 ttatgccctgtgaatgccttgtcattcaaactgttgagggctcatgccctgtgaatgccttgtcattcaa 31518315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 31518537 - 31518500
Alignment:
Q  11 gaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  31518537 gaatgccttgtcattcaaattgttgagggctcatgccc 31518500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 24504396 - 24504344
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||  ||||| ||||| || ||| ||||||    
T  24504396 atgccctggaatgccttgtcattcaatctgttgagggctcataccctggaatg 24504344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 2288328 - 2288414
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2288328 atgccctggaatgctttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgttacc 2288414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 15538897 - 15538811
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  15538897 atgccctggaatgccttgtcattcaaattgttgggggcttatgccctggaatgcttagtcattcaacacgatggaaatggtgttacc 15538811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 15686517 - 15686594
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaat 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  15686517 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttggaaat 15686594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16102058 - 16101992
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16102058 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 16101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16812533 - 16812467
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16812533 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggattgcttagtcattcaac 16812467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16829553 - 16829487
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16829553 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggattgcttagtcattcaac 16829487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13764025 - 13763942
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  13764025 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggtgc 13763942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 29492510 - 29492446
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29492510 atgccctggaatgcctcgtcattcaaattgttgggggcttatgccccggaatgcttagtcattca 29492446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16804714 - 16804648
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16804714 atgccctggaatgccttgtcattcaaattgttggggtcttatgccccggattgcttagtcattcaac 16804648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 23352196 - 23352115
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23352196 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggtgc 23352115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 221701 - 221618
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  221701 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccccagaatgcttagtcattcaacacgttgaaaatggtgc 221618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23621327 - 23621394
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  23621327 ttatgccctgtaatgccttgtcattcaaattgttgagggcttatgccctggaatgcttagtcattcaa 23621394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12595673 - 12595607
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  12595673 atgccctggaatgccttgtcattcaaattgttggggacttatgccctagaatgcttagtcattcaac 12595607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 15539017 - 15538952
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||    
T  15539017 atgccctggaatgccttgccattcaaattgttgggggcttatgctccggaaagctttgtcattcaa 15538952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 8522528 - 8522481
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8522528 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 8522481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8522666 - 8522599
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  8522666 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 8522599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 24266741 - 24266659
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgctt-agtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||  || |||||||||||||||||||||||||||||  ||||||| |||||||||||||| || |||||||||    
T  24266741 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccataatgcttaagtcattcaacacgttgaaaatggtgc 24266659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16102100 - 16102033
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  16102100 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 16102033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29848547 - 29848615
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaaca 70  Q
    |||||||||||||||  || ||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  29848547 ttatgccctggaatgt-ttatcattcaaatttttgagggcttatgcctcgaaatgcttagtcattcaaca 29848615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2288247 - 2288315
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||| ||||| ||||| | |||| ||||||| | ||||||||||    
T  2288247 ttatgccctggaatgctttgtcattcaaactgttgagggctcaagccctggaatgccttgtcattcaac 2288315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13764337 - 13764270
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| |||||| ||| |||||||||    
T  13764337 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaac 13764270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15539059 - 15539004
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgc 56  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| |||||||    
T  15539059 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgc 15539004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16102139 - 16102073
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  16102139 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 16102073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 15538937 - 15538872
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| |||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  15538937 atgccctgggatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 15538872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15538979 - 15538912
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||| | |||| || |||||||||||||||||| ||||| |||||| || |||||| |||||||||    
T  15538979 ttatgctccggaaagctttgtcattcaaattgttgagggctcatgccctgggatgctttgtcattcaa 15538912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 24440911 - 24440865
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  24440911 tcattgaaattgttgggg-cttatgccccggaatgcgtagtcattcaa 24440865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13751341 - 13751411
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattc-aaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||| | ||||||||| | ||||||    
T  13751341 ttatgccctgtgaatgccttgtcattcaaaattgttgagggcttatgccctgtgaatgcttaattattcaa 13751411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1639189 - 1639120
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| ||||||||||||||||||| | ||| ||||| |||||| | ||||||||| ||||||||    
T  1639189 ttatgccctgtgaatgccttgtcattcaaactattgagggctcatgccctgtgaatgcttaatcattcaa 1639120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 16829592 - 16829528
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| || ||||| ||||| |||||| ||||||| | |||||||||    
T  16829592 atgccctggaatgctttgtcattc-aactgttgagggctcatgccctggaatgccttgtcattcaa 16829528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 23621290 - 23621354
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| || ||||| |||||||||||| | ||||| | |||||||||    
T  23621290 atgccctggaatgctttgtcattc-aactgttgagggcttatgccctgtaatgccttgtcattcaa 23621354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12389593 - 12389545
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||| ||||||||||||||||||| ||||| ||||| ||||||    
T  12389593 ttatgccctgtgaatgccttgtcattcaaactgttgagggctcatgccc 12389545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12595753 - 12595686
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||| || ||||| |||||||||| |  |||||||| ||||||||||    
T  12595753 ttatgccctggaatgctatgtcattc-aactgttgagggcttatgctctagaatgctttgtcattcaac 12595686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15686437 - 15686504
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  ||||||||||   |||| |||||||||||| ||||||||  ||||||||||    
T  15686437 ttatgccctggaatgctatgtcattcaaca-gttgagggcttatgccctggaatgctatgtcattcaac 15686504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 16799434 - 16799348
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  16799434 atgccctggaatgccttgtcattcaaattgttgggggcttatgccctggaatgcttagtcattcaacacgatggaaatggtgttacc 16799348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 179831 - 179909
Alignment:
Q  5 gccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  179831 gccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 179909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 2035427 - 2035493
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2035427 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 2035493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 2039168 - 2039234
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2039168 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 2039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 2042909 - 2042975
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2042909 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 2042975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 7631999 - 7631933
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7631999 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 7631933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14037892 - 14037826
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14037892 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 14037826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14041360 - 14041294
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14041360 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 14041294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 15010539 - 15010605
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15010539 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 15010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 603990 - 604056
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  603990 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccagaatgcttagtcattcaac 604056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16799553 - 16799487
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16799553 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgctttgtcattcaac 16799487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14951891 - 14951958
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14951891 ttatgccctggaatgctttgtcattcaaattgttgagggcttatgccccggaatgcttagtcattcaa 14951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30206567 - 30206638
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  30206567 ttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatgcttagtcattcaacacg 30206638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 54046529 - 54046463
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  54046529 atgccctggaatgccttgtcattcgaattgttgggggctcatgccccggaatgcttagtcattcaac 54046463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39230497 - 39230430
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  39230497 ttatgccctggaatgccttgtcattcaact-gttgggggcttatgccccggaatgcttagtcattcaac 39230430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 55292752 - 55292839
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||| ||||| |||||||||||   || | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55292752 ttatgccctgaaatgctttgtcattcaacc-gtggagggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 55292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 10554138 - 10554073
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10554138 atgccctggaatgctttgtcattcaaattgttgggggcttatgccctggaatgctttgtcattcaa 10554073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 6806108 - 6806187
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  6806108 atgccctggaatgt-ttatcattcaaactgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 6806187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23396146 - 23396214
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  23396146 ttatgccctagaatgccttgtcattcaaattgttgggggattatgccctggaatgctttgtcattcaac 23396214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 10990059 - 10990121
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  10990059 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatggt 10990121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 17211185 - 17211123
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  17211185 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatggt 17211123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 18958612 - 18958546
Alignment:
Q  3 atgccctggaa-tgccttgtcatt-caaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18958612 atgccctggaaatgccttgtcatttcaaattgttgggggcttatgccccggaatgcttagtcattca 18958546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 52339188 - 52339250
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  52339188 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatggt 52339250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 1989428 - 1989491
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtg 84  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  1989428 tcattcacattgttgggggcttatgccctggaatgcttagtcattcaacacgttgaaaatggtg 1989491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 52339011 - 52339078
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| | |||||||||    
T  52339011 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaa 52339078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 179748 - 179816
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| || ||||||||||    
T  179748 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgatttgtcattcaac 179816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 10834528 - 10834592
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| | || |||||||||    
T  10834528 tcattcaaattgttgggggcttatgccccataatgcttagtcattcaacatgttgaaaatggtgc 10834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23396225 - 23396308
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||||  || ||||||||||||||||| || |||| ||||    
T  23396225 ttatgccctggaatgt-ttatcattcaaattgttgggggcttatgccccgatatacttagtcattcaacacgttgaaaatagtgc 23396308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2035385 - 2035452
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||| | |||||||||    
T  2035385 ttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaa 2035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2039126 - 2039193
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||| | |||||||||    
T  2039126 ttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaa 2039193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2042867 - 2042934
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||| | |||||||||    
T  2042867 ttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaa 2042934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6806066 - 6806132
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  6806066 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 6806132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 54972930 - 54972884
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  54972930 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 54972884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 54975540 - 54975494
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  54975540 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 54975494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 54978150 - 54978104
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  54978150 tcattcaaattgttgggggcttatgcctcggaatgcttagtcattca 54978104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2038853 - 2038920
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2038853 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2038920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2038892 - 2038959
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2038892 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2038959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2038931 - 2038998
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2038931 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2038998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2038970 - 2039037
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2038970 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2039009 - 2039076
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2039009 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2039076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2039048 - 2039115
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2039048 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2039115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042594 - 2042661
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042594 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042633 - 2042700
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042633 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042672 - 2042739
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042672 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042711 - 2042778
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042711 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042750 - 2042817
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042750 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042789 - 2042856
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042789 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18958692 - 18958625
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  18958692 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 18958625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2035346 - 2035412
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  2035346 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 2035412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2039087 - 2039153
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  2039087 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 2039153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2042828 - 2042894
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  2042828 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 2042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14037934 - 14037867
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  14037934 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 14037867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14041402 - 14041335
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  14041402 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 14041335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23396067 - 23396133
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  23396067 ttatgccctggaatgccttgtcattcaaaatgttgagggctcatgccctggaatg-ttaatcattcaa 23396133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54973108 - 54973041
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||| | ||||||||| |||||||||    
T  54973108 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaa 54973041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54973147 - 54973081
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||| | |||||||||    
T  54973147 ttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccctggaatgccttgtcattcaa 54973081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54975718 - 54975651
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||| | ||||||||| |||||||||    
T  54975718 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaa 54975651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54975757 - 54975691
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||| | |||||||||    
T  54975757 ttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccctggaatgccttgtcattcaa 54975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54978328 - 54978261
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||| | ||||||||| |||||||||    
T  54978328 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaa 54978261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54978367 - 54978301
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||| | |||||||||    
T  54978367 ttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccctggaatgccttgtcattcaa 54978301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 6818948 - 6818887
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||| || |||||||    
T  6818948 tcattcaaattgttgggggcttataccc-ggaattcttagtcattcaacacgttgaaaatggt 6818887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3395010 - 3395079
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||||||| ||||||||    
T  3395010 ttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgccctgtgaatgcttaatcattcaa 3395079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 10989884 - 10989949
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||| | ||||||| |||||||||    
T  10989884 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccctgtaatgctttgtcattcaa 10989949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 14951854 - 14951918
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  14951854 atgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 14951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 16799474 - 16799409
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  16799474 atgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 16799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 16799593 - 16799528
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  16799593 atgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 16799528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2035307 - 2035374
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2035307 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2035374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2038814 - 2038881
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2038814 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2038881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2042555 - 2042622
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  2042555 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 2042622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14037973 - 14037907
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  14037973 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 14037907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14041441 - 14041375
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  14041441 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 14041375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 52339053 - 52339118
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||| | |||| ||| |||||||||    
T  52339053 atgccctggaatgccttgtcattcaaattgttgagagctcatgccctgaaatg-ttaatcattcaac 52339118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 54973066 - 54973001
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  54973066 atgctctggaatgctttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 54973001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 54975676 - 54975611
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  54975676 atgctctggaatgctttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 54975611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 54978286 - 54978221
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  54978286 atgctctggaatgctttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 54978221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 6819078 - 6819033
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  6819078 atgccctggaatgccttgtcattcaaactgttgagggctcatgccc 6819033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10554100 - 10554033
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  10554100 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 10554033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39230536 - 39230469
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||| | ||||||||||    
T  39230536 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgccttgtcattcaac 39230469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6819160 - 6819113
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgcc 47  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  6819160 ttatgccctgtgaatgccttgtcattcaaactgttgagggcttatgcc 6819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10990000 - 10990047
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||||  ||||| ||||| ||||||    
T  10990000 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccc 10990047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16799515 - 16799449
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||| ||||||| ||||||||| || ||||| ||||| |||||| ||||||||| |||||||||    
T  16799515 ttatgccccggaatgctttgtcattc-aactgttgagggctcatgccctggaatgctttgtcattcaa 16799449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 23396126 - 23396173
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||||    
T  23396126 tcattcaaattgttgggggcttatgccctagaatgccttgtcattcaa 23396173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 12856059 - 12856105
Alignment:
Q  22 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  12856059 cattcaaattgttgagggctcatgccctggaatgctttgtcattcaa 12856105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 15010461 - 15010526
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| ||||||||| || || || ||||| |||||| ||||||||| ||||||||||    
T  15010461 atgccctggaatgctttgtcattc-aactgctgagggctcatgccctggaatgctttgtcattcaac 15010526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 18367772 - 18367830
Alignment:
Q  11 gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||| ||||| |||||| | ||||||| | ||||||||    
T  18367772 gaatgccttgtcattcaaattgttgagggctcatgccctgtgaatgctaaatcattcaa 18367830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52339129 - 52339175
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgcc 47  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||||    
T  52339129 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgcc 52339175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 603951 - 604015
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| || ||||| ||||| |||||| ||||||| | |||||||||    
T  603951 atgccctggaatgctttgtcattc-aactgttgagggctcatgccctggaatgccttgtcattcaa 604015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 9912 - 9884
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaa 29  Q
    |||||||||||||||||||||||||||||    
T  9912 ttatgccctggaatgccttgtcattcaaa 9884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10989922 - 10989989
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||| ||||| |||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  10989922 ttatgccctgtaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 10989989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 296245 - 296157
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  296245 ttatgccctggaatgtcttgtcattcaaattgttgggggcttaagccccggaatgcttagtcattcaacacgatagaaatggtgatacc 296157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 14432753 - 14432819
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14432753 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 14432819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20630992 - 20630926
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20630992 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 20630926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 24087194 - 24087117
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaat 80  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  24087194 atgccctggaatgccttatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacatgttggaaat 24087117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 36181290 - 36181224
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36181290 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccgaaatgcttagtcattcaac 36181224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 2333460 - 2333527
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggg-gcttatgccccggaatgcttagtcattcaac 69  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2333460 atgccttggaatgccttgtcattcaaattgttggggggcttatgccccggaatgcttagtcattcaac 2333527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 21181581 - 21181643
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  21181581 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 21181643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 28204768 - 28204830
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  28204768 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 28204830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 18270247 - 18270183
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  18270247 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatagtgc 18270183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 18274901 - 18274837
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  18274901 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatagtgc 18274837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 28312131 - 28312068
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtg 84  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  28312131 tcattcaaattgttgggggcttttgccccggaatgcttagtcattcaacacgttgaaaatggtg 28312068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 293829 - 293767
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||    
T  293829 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaactcgttgaaaatggt 293767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22900615 - 22900681
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  22900615 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 22900681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 20901064 - 20901001
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  20901064 tcattcaaattgttgggg-cttatgccccggaatgcttagtcattcaacacgttgaaaatggtgc 20901001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 18823509 - 18823462
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18823509 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 18823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 20579087 - 20579040
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20579087 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 20579040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 20586780 - 20586733
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586780 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 20586733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 22900711 - 22900762
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22900711 tcattcaaattgttgggggcttatgctccggaatgcttagtcattcaacacg 22900762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 37358247 - 37358201
Alignment:
Q  23 attcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37358247 attcaaattgttgggggcttatgccccggaatgcttagtcattcaac 37358201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 16400659 - 16400611
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16400659 tcattcaaattgttgggggcttattccccggaatgcttagtcattcaac 16400611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36181332 - 36181265
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  36181332 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 36181265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 45306910 - 45306863
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45306910 tcattcaaattgtggggggcttatgccccggaatgcttagtcattcaa 45306863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45307048 - 45306981
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  45307048 ttatgccctggaatgccttgccattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 45306981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 19209470 - 19209407
Alignment:
Q  23 attcaaattgttgggggcttatgccccggaatgctt-agtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||| || |||||||||    
T  19209470 attcaaattgttgggggcttatcccctggaatgcttaagtcattcaacacgttgaaaatggtgc 19209407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20631034 - 20630967
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  20631034 ttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 20630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20631073 - 20631007
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  20631073 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaa 20631007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20901199 - 20901133
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||| ||||||||||||||||||  |||| ||||| |||||| ||||||||| ||||||||||    
T  20901199 atgccctgtaatgccttgtcattcaaaccgttgagggctcatgccctggaatgctttgtcattcaac 20901133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 14432713 - 14432778
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  14432713 atgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 14432778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20631112 - 20631045
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||  |||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  20631112 ttatgccctggaatgctatgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 20631045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 293961 - 293899
Alignment:
Q  6 ccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||| |||||| ||||| |||||| |||||| ||| |||||||||    
T  293961 ccctggaatgccttgtcattcaatttgttgagggctcatgccctggaatg-ttaatcattcaac 293899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14432672 - 14432738
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||  |||||||||| | |||||||||| |||||| ||||||||| |||||||||    
T  14432672 ttatgccctggaatgctatgtcattcaact-gttgggggctcatgccctggaatgctttgtcattcaa 14432738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18823608 - 18823541
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||| ||||||||| ||||| ||| | |||||| ||||||| | |||||||||    
T  18823608 ttatgccctggaatgccttttcattcaaactgttgagggttcatgccctggaatgccttgtcattcaa 18823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28204709 - 28204756
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  28204709 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccc 28204756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36181371 - 36181305
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||| || ||||| |||||||||||| ||||||| | |||||||||    
T  36181371 ttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctggaatgccttgtcattcaa 36181305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19209531 - 19209477
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| |||||| ||||||    
T  19209531 ttatgccttggaatgccttgtcattcaaactgttgagggctcatgccctggaatg 19209477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20901159 - 20901094
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||  ||||||||| ||||||||||    
T  20901159 atgccctggaatgctttgtcattcaact-gttgagggcttatgccatggaatgctttgtcattcaac 20901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 18823566 - 18823521
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  18823566 atgccctggaatgccttgtcattcaaactgttgagggctcatgccc 18823521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 20579183 - 20579119
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  20579183 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 20579119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 20586876 - 20586812
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  20586876 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 20586812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21181522 - 21181567
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgc 46  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  21181522 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgc 21181567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18270306 - 18270259
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  18270306 ttatgccctggaatgccttgtctttcaaactgttgagggctcatgccc 18270259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18274960 - 18274913
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  18274960 ttatgccctggaatgccttgtctttcaaactgttgagggctcatgccc 18274913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20579224 - 20579158
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||  ||||||||| |||||||| ||||| |||||| ||||||| | |||||||||    
T  20579224 ttatgccctggaatgttttgtcattc-aattgttgagggctcatgccctggaatgccttgtcattcaa 20579158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20586917 - 20586851
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||  ||||||||| |||||||| ||||| |||||| ||||||| | |||||||||    
T  20586917 ttatgccctggaatgttttgtcattc-aattgttgagggctcatgccctggaatgccttgtcattcaa 20586851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 293888 - 293834
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||| ||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  293888 ttatgccttggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 293834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 294005 - 293939
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgcccc-ggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| ||  |||||||||||| ||||||| | |||||||||    
T  294005 atgccctggaacgccttgtcgttcaaattggtgatggcttatgcccctggaatgccttgtcattcaa 293939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2333382 - 2333446
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||  ||||| ||||| |||||| |||||| ||| ||||||||    
T  2333382 atgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaa 2333446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 21181407 - 21181452
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||| ||| ||||| ||||| ||||||    
T  21181407 atgccctggaatgccttgtcattgaaactgttgagggctcatgccc 21181452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 22759169 - 22759246
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaat 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  22759169 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacatgttggaaat 22759246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 27869878 - 27869946
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctacc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27869878 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtggtacc 27869946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 26361487 - 26361553
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26361487 atgccctggaatgccttgtcattgaaattgttgggggcttatgccccggaatgcttagtcattcaac 26361553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 4397503 - 4397426
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaat 80  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||    
T  4397503 atgccctgaaatgccttgtcattcaaattattgggggcttatgccccagaatgcttagtcattcaacccgttggaaat 4397426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 24277698 - 24277777
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  24277698 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttattcattcaacacgttgaaaatggt 24277777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 24384515 - 24384436
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  24384515 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccggaatgcttattcattcaacacgttgaaaatggt 24384436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 16256336 - 16256402
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  16256336 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 16256402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 16259930 - 16259996
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  16259930 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 16259996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 22469824 - 22469774
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacac 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22469824 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacac 22469774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22590094 - 22590160
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  22590094 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 22590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22593649 - 22593715
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  22593649 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 22593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22597204 - 22597270
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  22597204 atgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 22597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 16256432 - 16256483
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16256432 tcattcaaattgttgggggcttatgctccggaatgcttagtcattcaacacg 16256483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 16260026 - 16260077
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16260026 tcattcaaattgttgggggcttatgctccggaatgcttagtcattcaacacg 16260077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 22590190 - 22590241
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22590190 tcattcaaattgttgggggcttatgctccggaatgcttagtcattcaacacg 22590241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 22593745 - 22593796
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22593745 tcattcaaattgttgggggcttatgctccggaatgcttagtcattcaacacg 22593796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 22597300 - 22597351
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22597300 tcattcaaattgttgggggcttatgctccggaatgcttagtcattcaacacg 22597351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 26495482 - 26495435
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26495482 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 26495435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 29325745 - 29325792
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29325745 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 29325792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43120837 - 43120790
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43120837 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 43120790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43124370 - 43124323
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43124370 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 43124323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 8953084 - 8953148
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8953084 atgccctggaatgt-ttatcattcaaattgttggggacttatgccccggaatgcttagtcattcaa 8953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26495620 - 26495553
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  26495620 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 26495553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29325607 - 29325674
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||    
T  29325607 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg-ttaatcattcaac 29325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22469920 - 22469854
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||| ||||||||||    
T  22469920 atgccctggaaagccttgtcattcaaactgttgagggctcatgccctggaatgctttgtcattcaac 22469854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24277656 - 24277722
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  24277656 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 24277722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24384557 - 24384491
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  24384557 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 24384491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22357962 - 22358027
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||  || ||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  22357962 atgccctggaatgt-ttatcattcaaattgttgagggcttatgccctggaatgctttgtcattcaac 22358027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 22357922 - 22357986
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  22357922 atgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 22357986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23671544 - 23671480
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| ||||||||||| |||||||    
T  23671544 atgccctggaatgccttgtcattc-aactgttgagggctcatgccctggaatgcttagccattcaa 23671480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 23693173 - 23693108
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||| |||||||| ||||| |||||| ||||||| | ||||||||||    
T  23693173 atgccctggaatgcctcgtcattc-aattgttgagggctcatgccctggaatgccttgtcattcaac 23693108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 22358059 - 22358123
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    ||||||||||||||| || |||||||||  ||||||||||| |||||||| | || |||||||||    
T  22358059 tcattcaaattgttgaggtcttatgccctagaatgcttagttattcaacatgttgaaaatggtgc 22358123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22759089 - 22759156
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  22759089 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 22759156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 24277636 - 24277683
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||| |||||||||||| ||||||| | |||||||||    
T  24277636 tcattcaaattgttgagggcttatgccctggaatgccttgtcattcaa 24277683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 24384577 - 24384530
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||| |||||||||||| ||||||| | |||||||||    
T  24384577 tcattcaaattgttgagggcttatgccctggaatgccttgtcattcaa 24384530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22759013 - 22759078
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||| |||||| |||||||||||| ||||| ||||| |||||| |||||| ||| |||||||||    
T  22759013 atgccctagaatgctttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaac 22759078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 23671583 - 23671518
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||| ||| |||| ||||| |||||| ||||||| | ||||||||||    
T  23671583 atgccctggaatgcctcgtcattc-aatcgttgagggctcatgccctggaatgccttgtcattcaac 23671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 16256297 - 16256361
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||| ||  |||| ||||| |||||| ||||||| | |||||||||    
T  16256297 atgccctggaatgccttgtcattc-aaccgttgagggctcatgccctggaatgccttgtcattcaa 16256361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 21495046 - 21495001
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||| |||||||| ||||||||| || ||||||||||||    
T  21495046 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccc 21495001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 22758973 - 22759038
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || ||||  ||||||  |||||||| |||||||||    
T  22758973 atgccctggaacgccttgtcgttcaaattggtgagggcacatgccctagaatgctttgtcattcaa 22759038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 23693250 - 23693186
Alignment:
Q  4 tgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||| ||||||| ||  |||| ||||| |||||| ||||||||| ||||||||||    
T  23693250 tgccctggaatgcctcgtcattc-aaccgttgagggctcatgccctggaatgcttcgtcattcaac 23693186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 26361407 - 26361472
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||  |||||||||||| |||| ||||| |||||| | ||||||  |||||||||    
T  26361407 atgccctggaatgctatgtcattcaaatcgttgagggctcatgccctgaaatgctatgtcattcaa 26361472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 27869822 - 27869867
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||| ||||| || || ||||||    
T  27869822 atgccctggaatgccttgtcattcaaactgttgaggactcatgccc 27869867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27869705 - 27869771
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||| |||||||||| || ||||| ||||| |||||| |||||||||  |||||||||    
T  27869705 ttatgccctggaatg-cttgtcattc-aactgttgagggctcatgccctggaatgctttatcattcaac 27869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 134314 - 134380
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  134314 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 134380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 134274 - 134339
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||  |||||||||||| |||| ||||| |||||| ||||||| | |||||||||    
T  134274 atgccctggaatgctatgtcattcaaatcgttgagggctcatgccctggaatgccttgtcattcaa 134339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11816 - 11887
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  11816 ttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctggaatgcttagtcattcaacacg 11887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11737 - 11805
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  11737 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaac 11805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11697 - 11764
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||||    
T  11697 ttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaa 11764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 11779 - 11843
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||| | |||||||||    
T  11779 atgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgccttgtcattcaa 11843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14075 - 14146
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  14075 ttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctggaatgcttagtcattcaacacg 14146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14035 - 14102
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||    
T  14035 ttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaa 14102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13995 - 14062
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||||    
T  13995 ttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaa 14062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 3e-26; HSPs: 6)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 20868 - 20788
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| || |||||||    
T  20868 atgccctggaatgccttgtcattcaaattgttgagggctcatgccccgaaatgcttagtcattcaacacgttgaaaatggt 20788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20950 - 20883
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||    
T  20950 ttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaa 20883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 23946 - 23866
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||| ||||||||||||||||||| | ||| ||||| ||||||  |||||||||||||||||||||| || |||||||    
T  23946 atgccctagaatgccttgtcattcaaactattgagggctcatgccctagaatgcttagtcattcaacacgttgaaaatggt 23866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20910 - 20843
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  20910 ttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 20843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21029 - 20963
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| ||| ||||||||    
T  21029 ttatgccctggaatgccttgtcattcaaattgttgagggttcatgccctggaatgttta-tcattcaa 20963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23988 - 23921
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||  |||||| | |||||||||    
T  23988 ttatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgccttgtcattcaa 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 217 - 148
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  217 atgccctggaatgtcttgtcattcaaattgttgagggcttatgccctggaatgcttagtcattcaacacg 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 297 - 230
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||| ||||||||||| || || ||||| ||||| |||||| ||||||||| ||||||||||    
T  297 ttatgccctgggatgccttgtca-tccaactgttgagggctcatgccctggaatgctttgtcattcaac 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 4382 - 4313
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  4382 atgccctggaatgccttgtcattcaaattgttgagggcttgtgccctggaatgcttagtcattcaacacg 4313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 4538 - 4473
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| ||||||| ||| | |||| |||||||||||| ||||||||| ||||||||||    
T  4538 atgccctggaatgctttgtcatccaact-gttgagggcttatgccctggaatgctttgtcattcaac 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 4421 - 4357
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| || ||||| ||||| |||||| ||||||| | |||||||||    
T  4421 atgccctggaatgctttgtcattc-aactgttgagggctcatgccctggaatgccttgtcattcaa 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4501 - 4434
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||| || ||||| |||||||||||| || |||| | ||||| ||||    
T  4501 ttatgccctggaatgctttgtcattc-aactgttgcgggcttatgccctgggatgccttgtcatccaac 4434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 4072 - 4153
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  4072 atgccctggaatgt-ttatcattcaaattgttgggggcttatgccccgaaatgcttagtcattcaacacgttgaaaatggtgc 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3952 - 4018
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||| |||  |||| ||||| |||||| |||||| ||| ||||||||    
T  3952 ttatgccctggaatgccttgtcatttaaaccgttgagggctcatgccctggaatgttta-tcattcaa 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4030 - 4096
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||| |||||||||||||||||||||  |||| ||||| |||||| |||||| ||| ||||||||    
T  4030 ttatgccatggaatgccttgtcattcaaaccgttgagggctcatgccctggaatgttta-tcattcaa 4096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 59229 - 59151
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  59229 atgccctggaatg--ttatcattaaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 59151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 59388 - 59320
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||  | ||| ||||| |||| | ||||||||| ||||||||||    
T  59388 ttatgccctggaatgccttgtcattcaacctattgagggctcatgctctggaatgctttgtcattcaac 59320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 205353 - 205422
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||||| ||| ||||||||    
T  205353 ttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgccctgtgaatgtttaatcattcaa 205422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 5764 - 5685
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  5764 atgccctggaatgt-ttatcatttaaattgttgggggcttatgccccggaatgcttagtcattcaacacgttgaaaatggt 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5806 - 5752
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||| ||| ||||||||| ||||| ||||| |||||| ||||||    
T  5806 ttatgccctggaatgacttatcattcaaactgttgagggctcatgccctggaatg 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 6771 - 6709
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||    
T  6771 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcatcacgttgaaaatggt 6709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6829 - 6764
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||||| || ||||| ||||| |||||| |||||| ||| ||||||||    
T  6829 ttatgccctggaatgccttgtcattc-aactgttgagggctcatgcccaggaatgttta-tcattcaa 6764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 10633 - 10554
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||||||||| ||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  10633 atgccctggaatgt-ttatcattcaaattattgggggcttatgccccggaatgcttactcattcaacacgttgaaaatggt 10554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10675 - 10609
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||| | ||| ||||| |||||| |||||| ||| ||||||||    
T  10675 ttatgccctggaatgccttgtcattcaaactattgagggctcatgccctggaatgttta-tcattcaa 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50763 - 50684
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatg 81  Q
    |||||||||||||||  || |||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||    
T  50763 ttatgccctggaatgt-ttatcattcaaattgtttggggcttatgccccggaatgctcagtcattcaacacgttgaaaatg 50684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 50840 - 50774
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||    
T  50840 atgcccttgaatgccttgtcattcaaactgttgagggcttatgccctagaatgctttgtcattcaac 50774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 179 - 128
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  179 tcattcaaattgttgggggctcatgccccggaatgcttagtcattcaacacg 128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 35023 - 35074
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacg 72  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35023 tcattcaaattgttgggggcttatgccccgaaatgcttagtcattcaacacg 35074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34886 - 34953
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||| ||  |||| ||| |||||||| ||||||||| ||||||||||    
T  34886 ttatgccctggaatgctttgtcattc-aacagttgagggtttatgccctggaatgctttgtcattcaac 34953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34964 - 35011
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||    
T  34964 ttatgccctagaatgccttgtcattcaaactgttgagggctcatgccc 35011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 1951 - 2013
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||    
T  1951 tcattcaaattgttgggggcttacaccccggaatgcttagtcattcaacacgttgaaaatggt 2013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 1894 - 1945
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaat 54  Q
    ||||||||||||||||||||||||||| |||||  |||| |||||| |||||    
T  1894 atgccctggaatgccttgtcattcaaactgttgatggctcatgccctggaat 1945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 9608 - 9546
Alignment:
Q  23 attcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||    
T  9608 attcaaattgttgggggcttatgccccagaatgcctagtcattcaacacattggaaatggtgc 9546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9684 - 9618
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||||||||||||||  |||| ||||| ||||||  | |||||| ||||||||||    
T  9684 atgccctggaatgccttgtcattcaaaccgttgagggctcatgcccttgtatgctttgtcattcaac 9618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 32787 - 32741
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32787 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 32741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32885 - 32838
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||||  ||||| ||||| ||||||    
T  32885 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccc 32838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 2056 - 1994
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| || || |||||||    
T  2056 tcattcaaattgttgggggcttatgccccagaatgcttagtcattcaacccgttgaaaatggt 1994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 2309 - 2244
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||| ||||||||| || |||||||||||| ||||||||| |||||||||    
T  2309 atgccctggaatgccttgtcgttcaaattggtgagggcttatgccctggaatgctttgtcattcaa 2244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2271 - 2204
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| |||||| ||| |||||||||    
T  2271 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg-ttaatcattcaac 2204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2115 - 2061
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||| ||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  2115 ttatgccctagaatgccttgtcattcaatctgttgagggctcatgccctggaatg 2061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 82025 - 82071
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  82025 tcattcaaattgttgggggcttatgccccggaatgcttagtcattca 82071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 81927 - 81974
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||||||||||||||||||||  ||||| ||||| ||||||    
T  81927 ttatgccctggaatgccttgtcattcaatctgttgagggctcatgccc 81974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 6198 - 6243
Alignment:
Q  24 ttcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6198 ttcaaattgttgggggcttatgccccggaatgcttagtcattcaac 6243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6136 - 6190
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||| ||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  6136 ttatgccctagaatgccttgtcattcaatctgttgagggctcatgccctggaatg 6190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 1130 - 1050
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||||| ||||||||||||||||||| | ||| ||||| ||||||  |||||||||||||||||||||| || |||||||    
T  1130 atgccctagaatgccttgtcattcaaacttttgagggctcatgccctagaatgcttagtcattcaacacgttgaaaatggt 1050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1172 - 1105
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||  |||||| | |||||||||    
T  1172 ttatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgccttgtcattcaa 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 45; Significance: 9e-17; HSPs: 6)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 2185 - 2106
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||||||||||||||||||||| ||| ||||||||||||||||||| |||| || |||||||    
T  2185 atgccctggaatgt-ttatcattcaaattgttgggggcttaagcctcggaatgcttagtcattcagcacgttgaaaatggt 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 9029 - 8950
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||  || ||||||||||||||||||||||| ||| ||||||||||||||||||| |||| || |||||||    
T  9029 atgccctggaatgt-ttatcattcaaattgttgggggcttaagcctcggaatgcttagtcattcagcacgttgaaaatggt 8950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2227 - 2161
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  2227 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 2161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9071 - 9005
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  9071 ttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 9005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 2264 - 2200
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||| | |||||||||    
T  2264 atgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgccttgtcattcaa 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 9108 - 9044
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||| | |||||||||    
T  9108 atgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgccttgtcattcaa 9044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 223695 - 223759
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    |||||||||||||||||||||| || ||| |||||||||||||||||||||| || |||||||||    
T  223695 tcattcaaattgttgggggcttgtgtcccagaatgcttagtcattcaacacgttgaaaatggtgc 223759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 137528 - 137468
Alignment:
Q  23 attcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||||    
T  137528 attcaaattgttgggggcttatgctccggaatgcttagtcattcatcacgttgaaaatggt 137468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 137629 - 137562
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||| ||| |||||||| ||||||||| || |||||||||||| ||||||||| |||||||||    
T  137629 ttatgccctagaacgccttgtcgttcaaattggtgagggcttatgccctggaatgctttgtcattcaa 137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 137745 - 137680
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||| |||||||| ||||||||| || |||||||| ||| ||||||||| |||||||||    
T  137745 atgccctggaacgccttgtcgttcaaattggtgagggcttattccctggaatgctttgtcattcaa 137680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 137589 - 137535
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||||| ||||||    
T  137589 ttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatg 137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 81278 - 81323
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||| |||||||| ||||||||| || ||||||||||||    
T  81278 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccc 81323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 10531 - 10466
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| ||||||||||| | |||| ||||| |||||||||||||||||||||||||||    
T  10531 atgccctggaatgctttgtcattcaact-gttgagggctcatgccccggaatgcttagtcattcaac 10466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 120082 - 120021
Alignment:
Q  22 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||| || |||||||    
T  120082 cattcaaattgttgggggctcatgccccagaatgctcagtcattcaacacgttgaaaatggt 120021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 2825 - 2777
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  2825 tcattcaaattgttaggggcttatgccgcggaatgcttagtcattcaac 2777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2884 - 2830
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||| ||||||||||||  ||||| ||||| |||||| ||||||    
T  2884 ttatgccctggaatgtcttgtcattcaatctgttgagggctcatgccctggaatg 2830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 1543 - 1488
Alignment:
Q  28 aattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  1543 aattgctgggggcttatgccctggaatgcttagtcattcaacacgttgaaaatggt 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 1606 - 1554
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 55  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||| ||||||    
T  1606 atgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatg 1554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1646 - 1581
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||| ||||||||  |||| ||||| |||||| ||||||| | |||||||||    
T  1646 atgccctggaatgctttgccattcaaaccgttgagggctcatgccctggaatgccttgtcattcaa 1581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 8)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13079 - 13146
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||| || ||||||| ||||| |||||||||||| ||||||| | |||||||||    
T  13079 ttatgccctggaatgcctcgtgattcaaactgttgagggcttatgccctggaatgccttgtcattcaa 13146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13119 - 13185
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattca 67  Q
    |||||||||||||||||||||||||||||  | || |||||||||||| | ||||||| ||||||||    
T  13119 ttatgccctggaatgccttgtcattcaaaccgctgagggcttatgccctgaaatgctttgtcattca 13185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13237 - 13296
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagt 61  Q
    |||||||||||||||  || |||||||||||||| |||||||||||||| |||||||||||    
T  13237 ttatgccctggaatgt-ttatcattcaaattgtttggggcttatgccccagaatgcttagt 13296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12517 - 12583
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  12517 ttatgccttggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 12583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12596 - 12662
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||| |||||||||||||||||| ||||| ||||| |||||| |||||| ||| ||||||||    
T  12596 ttatgccctgaaatgccttgtcattcaaactgttgagggctcatgccctggaatgttta-tcattcaa 12662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13198 - 13263
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||||| | |||| |||||||||||| |||||| ||| ||||||||    
T  13198 ttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgttta-tcattcaa 13263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13159 - 13226
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||| ||||| ||||||||||  | ||||  ||||||||||| ||||||||| ||||||||||    
T  13159 ttatgccctgaaatgctttgtcattcatct-gttgacggcttatgccctggaatgctttgtcattcaac 13226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 124965 - 125009
Alignment:
Q  4 tgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||| |||||||| ||||||||| || ||||||||||||    
T  124965 tgccctggaacgccttgtcgttcaaattggtgagggcttatgccc 125009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 13959 - 13898
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| | || |||||||    
T  13959 tcattcaaattgttgggg-cttatgccccgaaatgcttagtcattcaacatgttgaaaatggt 13898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 11954 - 11893
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggt 83  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| | || |||||||    
T  11954 tcattcaaattgttgggg-cttatgccccgaaatgcttagtcattcaacatgttgaaaatggt 11893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 40147 - 40212
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||| ||||||||| ||||||||||    
T  40147 atgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgctttgtcattcaac 40212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40184 - 40251
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 69  Q
    |||||||||||||||| ||||||||| || ||||| ||||| |||||| ||||||||| ||||||||||    
T  40184 ttatgccctggaatgctttgtcattc-aactgttgagggctcatgccctggaatgctttgtcattcaac 40251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 40304 - 40388
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgctac 88  Q
    |||||||||||||  || ||||||||||||||||||||||| | ||| ||||| |  ||||||||||||| || ||||||| ||||    
T  40304 atgccctggaatgt-ttatcattcaaattgttgggggcttaaggcccagaatgttatgtcattcaacacgttgaaaatggtactac 40388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 40267 - 40328
Alignment:
Q  6 ccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||||||||||||| ||||  ||||| |||||| |||||| ||| ||||||||    
T  40267 ccctggaatgccttgtcattcaaactgttaagggctcatgccctggaatgttta-tcattcaa 40328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1457 - 1417
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggct 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  1457 ttatgccctggaatgccttgtcattcaaattgttgagggct 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1494 - 1430
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    |||||||||||||| ||||||||| ||  |||| |||||||||||| ||||||| | |||||||||    
T  1494 atgccctggaatgctttgtcattc-aaccgttgagggcttatgccctggaatgccttgtcattcaa 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 9065 - 9112
Alignment:
Q  21 tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 68  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  9065 tcattcaaattgttgggggcttaagccccggaaagctcagtcattcaa 9112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 8850 - 8900
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaa 53  Q
    |||||||||||||| ||||||||||||||| || |||||||||||| ||||    
T  8850 atgccctggaatgctttgtcattcaaattggtgagggcttatgccctggaa 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 8930 - 8983
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgc 56  Q
    |||||||| ||||| ||||||||||||||| || |||||||||||| |||||||    
T  8930 atgccctgaaatgctttgtcattcaaattggtgagggcttatgccctggaatgc 8983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 21314 - 21233
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacacgatggaaatggtgc 85  Q
    ||||||| |||||| || |||||||| | |||| ||||||||||| ||||||||||||| |||||||||| |  |||||||||    
T  21314 atgccctagaatgctttttcattcaact-gttgagggcttatgcctcggaatgcttagttattcaacacgttaaaaatggtgc 21233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 524759 - 524714
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||    
T  524759 atgccctggaatgccttgtcgttcaaattggtgagggcttatgccc 524714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 6674 - 6615
Alignment:
Q  11 gaatgccttgtcattc-aaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||||||||| ||||||||| |||||||||||| | ||||||||| ||||||||    
T  6674 gaatgccttgtcattcaaaattgttgagggcttatgccctgtgaatgcttaatcattcaa 6615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 165667 - 165714
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||||||    
T  165667 ttatgccctggaatgcattgtcattcaaactgttgagggctcatgccc 165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 161 - 91
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattc-aaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||| | ||||||||| | ||||||    
T  161 ttatgccctgtgaatgccttgtcattcaaaattgttgagggcttatgccctgtgaatgcttaattattcaa 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 29340 - 29398
Alignment:
Q  11 gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||| |||||||||||||||||||| ||||| |||||| | ||||||||| ||||||||    
T  29340 gaattccttgtcattcaaattgttgagggctcatgccctgtgaatgcttaatcattcaa 29398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 20802 - 20744
Alignment:
Q  11 gaatgccttgtcattcaaattgttgggggcttatgccccg-gaatgcttagtcattcaa 68  Q
    |||||||| |||||||||||||||| ||||| |||||| | ||||||||| ||||||||    
T  20802 gaatgcctcgtcattcaaattgttgagggctcatgccctgtgaatgcttaatcattcaa 20744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 3675 - 3720
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||||||||||||| ||||||||| || | ||||||||||    
T  3675 atgccctggaatgccttgtcgttcaaattggtgagagcttatgccc 3720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 17974 - 17929
Alignment:
Q  3 atgccctggaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    ||||||||||| |||||||| ||||||||| || ||||||||||||    
T  17974 atgccctggaacgccttgtcgttcaaattggtgagggcttatgccc 17929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3084 - 3036
Alignment:
Q  1 ttatgccctg-gaatgccttgtcattcaaattgttgggggcttatgccc 48  Q
    |||||||||| |||||||||||| |||||||||||| ||||| ||||||    
T  3084 ttatgccctgtgaatgccttgtccttcaaattgttgagggctcatgccc 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 20803 - 20775
Alignment:
Q  1 ttatgccctggaatgccttgtcattcaaa 29  Q
    |||||||||||||||||||||||||||||    
T  20803 ttatgccctggaatgccttgtcattcaaa 20775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University