View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17145_low_17 (Length: 369)
Name: NF17145_low_17
Description: NF17145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17145_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 42655784 - 42656137
Alignment:
| Q |
1 |
ctgatcacaaattcatcacccgcactcatgtaggaaaatttcattttaatttggagagaaaagcatatcactannnnnnnnnnnnnna-aaacagtaaat |
99 |
Q |
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| T |
42655784 |
ctgatcacaaattcatcacccgcacttatgtaggaaaatttcattttaatttggagagaaaagcatatcactgttttttttttttttttaaacaataaat |
42655883 |
T |
|
| Q |
100 |
atcaatggaatctctcaaggcaaaattgacacgtgcccaacaattttctgtcataacaaaacaaaacggacaaaataagagcggtgattttgttaacatc |
199 |
Q |
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| T |
42655884 |
atcaatggaatctctcaaggcaaaattgacacgtgcccaacaattttctgtcataacaaaacaaaacggacaaaataatagcggtgattttgttaacatc |
42655983 |
T |
|
| Q |
200 |
tgtggaatctaatctaaggtttgagagtaaagttaaataggccagggaaatatgcaattagaaatattag-aaaataacaaaaaggcgagattccttttg |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
42655984 |
tgtggaatctaatctaaggtttgagagtaaagttaaataggccagggaaatatgtaattagaaatattagaaaaataacaaaaaggcgagattccttttg |
42656083 |
T |
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| Q |
299 |
ctaaaattctacctgatgaaaatctacatagattattatatttatgtgactact |
352 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42656084 |
ctaaaattctacctgatgaaaatctacatagattattatatttatgtgactact |
42656137 |
T |
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