View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17145_low_18 (Length: 366)
Name: NF17145_low_18
Description: NF17145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17145_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 352
Target Start/End: Complemental strand, 9496233 - 9495901
Alignment:
| Q |
20 |
tgcttaagaagagaagattcatattaaagtgtcggacgaggtattttatattaggaactgcgctcga----gttaccgaatccgaagcaattctaaccaa |
115 |
Q |
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| T |
9496233 |
tgcttaagaagagaagattcatattaaagtgtcggacgaggtattttatattaggaactgcgctcgatcgagttaccgaacccgaagcagttctaaccaa |
9496134 |
T |
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| Q |
116 |
tgacactcattttttcaatcctaaaggaagtaatcctattttctatagaggttgttaacatcaagccaaagcaccttagataaaaaagaaaattgttaaa |
215 |
Q |
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| T |
9496133 |
tgacactcattttttcaatcctaaaggaagtaatcctattttctatagaggttgttaacatcaagccaaagcacctta----aaaaagaaaattgttaaa |
9496038 |
T |
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| Q |
216 |
tttgaaccgtacttgaaccaatcaataaagggagttgatcacattggtaattctaggataaccaccatagatccttaaaaatggagacataaaccctata |
315 |
Q |
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| T |
9496037 |
tttgaaccgtacttgaaccaatcaataaagggagttgttcacattggtaattctaggataaccaccatagatccttaaaaatggagacataaaccctata |
9495938 |
T |
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| Q |
316 |
ggaaagaaaactctgtaaatatatgaattgttccctt |
352 |
Q |
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||| ||||||||||||||||||||||||||||||||| |
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| T |
9495937 |
ggagagaaaactctgtaaatatatgaattgttccctt |
9495901 |
T |
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