View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17145_low_43 (Length: 240)

Name: NF17145_low_43
Description: NF17145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17145_low_43
NF17145_low_43
[»] chr7 (47 HSPs)
chr7 (64-213)||(11244812-11244962)
chr7 (3-63)||(46246576-46246636)
chr7 (64-194)||(15561331-15561461)
chr7 (3-62)||(12178482-12178541)
chr7 (3-61)||(46245122-46245180)
chr7 (4-61)||(11669841-11669898)
chr7 (4-63)||(706741-706800)
chr7 (4-63)||(27161997-27162056)
chr7 (3-63)||(12180640-12180700)
chr7 (3-63)||(13420287-13420347)
chr7 (3-63)||(38758318-38758378)
chr7 (4-63)||(708154-708213)
chr7 (3-62)||(37133650-37133709)
chr7 (4-62)||(41591514-41591572)
chr7 (3-61)||(45277968-45278026)
chr7 (4-65)||(41385811-41385872)
chr7 (3-71)||(11671287-11671355)
chr7 (3-59)||(14774515-14774571)
chr7 (3-59)||(15224968-15225024)
chr7 (3-63)||(21715070-21715130)
chr7 (3-63)||(21716620-21716680)
chr7 (7-62)||(3704397-3704452)
chr7 (3-62)||(8230069-8230128)
chr7 (4-63)||(27160303-27160362)
chr7 (3-62)||(31392057-31392116)
chr7 (3-62)||(31393660-31393719)
chr7 (3-58)||(40028460-40028515)
chr7 (4-62)||(32429872-32429930)
chr7 (7-61)||(37348735-37348789)
chr7 (3-61)||(38756655-38756713)
chr7 (1-63)||(40030028-40030090)
chr7 (3-60)||(8231635-8231692)
chr7 (1-62)||(32882714-32882774)
chr7 (4-61)||(41593205-41593262)
chr7 (19-63)||(28848556-28848600)
chr7 (14-58)||(37350216-37350260)
chr7 (19-63)||(43546747-43546791)
chr7 (19-62)||(25008091-25008134)
chr7 (4-63)||(37547932-37547991)
chr7 (9-63)||(15136946-15137000)
chr7 (7-61)||(20208469-20208523)
chr7 (4-62)||(41384148-41384206)
chr7 (4-61)||(28556246-28556303)
chr7 (14-63)||(31734766-31734815)
chr7 (3-60)||(37131836-37131893)
chr7 (4-48)||(1521121-1521165)
chr7 (11-59)||(39787760-39787808)
[»] chr5 (23 HSPs)
chr5 (3-62)||(38626171-38626230)
chr5 (3-62)||(38624715-38624774)
chr5 (3-62)||(16308564-16308623)
chr5 (3-63)||(27756786-27756846)
chr5 (4-63)||(9672353-9672412)
chr5 (3-57)||(28592081-28592135)
chr5 (5-62)||(28592421-28592477)
chr5 (1-61)||(8874273-8874333)
chr5 (1-60)||(16310098-16310157)
chr5 (3-61)||(17555004-17555063)
chr5 (4-59)||(35931350-35931405)
chr5 (4-64)||(13373765-13373825)
chr5 (4-60)||(35929523-35929579)
chr5 (3-58)||(11771201-11771256)
chr5 (3-62)||(33489900-33489959)
chr5 (3-61)||(1418937-1418995)
chr5 (3-61)||(30332283-30332341)
chr5 (11-60)||(18201354-18201403)
chr5 (3-59)||(8872522-8872578)
chr5 (3-59)||(25916279-25916335)
chr5 (3-59)||(36619546-36619602)
chr5 (11-63)||(39103420-39103472)
chr5 (31-63)||(41281872-41281904)
[»] chr3 (29 HSPs)
chr3 (3-62)||(41081801-41081860)
chr3 (4-63)||(32558917-32558976)
chr3 (3-62)||(40499253-40499312)
chr3 (3-61)||(31796835-31796893)
chr3 (3-63)||(41083272-41083332)
chr3 (3-62)||(48566995-48567054)
chr3 (3-61)||(31795373-31795431)
chr3 (3-61)||(48568531-48568589)
chr3 (4-62)||(3026883-3026941)
chr3 (4-61)||(32613883-32613941)
chr3 (4-58)||(32615648-32615702)
chr3 (1-58)||(22942339-22942396)
chr3 (3-63)||(3150020-3150080)
chr3 (4-64)||(32559885-32559945)
chr3 (4-59)||(24613614-24613669)
chr3 (10-60)||(24612279-24612329)
chr3 (4-62)||(33780656-33780714)
chr3 (4-58)||(33781496-33781550)
chr3 (4-61)||(31199249-31199306)
chr3 (3-58)||(31656956-31657011)
chr3 (3-62)||(33732964-33733023)
chr3 (19-62)||(8391400-8391443)
chr3 (7-62)||(25529922-25529977)
chr3 (3-58)||(30700299-30700354)
chr3 (3-62)||(53527969-53528028)
chr3 (3-62)||(53529535-53529594)
chr3 (4-62)||(44458594-44458652)
chr3 (3-63)||(3149260-3149320)
chr3 (3-63)||(41879922-41879982)
[»] chr2 (42 HSPs)
chr2 (3-61)||(40304763-40304821)
chr2 (3-63)||(40303291-40303351)
chr2 (3-63)||(45493033-45493093)
chr2 (3-63)||(45500775-45500835)
chr2 (3-62)||(45499304-45499363)
chr2 (3-62)||(44097354-44097413)
chr2 (4-62)||(22054333-22054391)
chr2 (7-60)||(22060485-22060538)
chr2 (3-63)||(6844098-6844158)
chr2 (3-59)||(7317392-7317448)
chr2 (3-68)||(16143597-16143662)
chr2 (4-61)||(22060162-22060219)
chr2 (3-63)||(22053123-22053183)
chr2 (3-63)||(28165656-28165716)
chr2 (3-58)||(6842718-6842773)
chr2 (4-62)||(18224847-18224905)
chr2 (4-62)||(43516397-43516455)
chr2 (4-62)||(44820932-44820990)
chr2 (3-59)||(44465091-44465147)
chr2 (7-63)||(44492316-44492372)
chr2 (3-62)||(28563375-28563434)
chr2 (3-61)||(10343988-10344046)
chr2 (3-61)||(16142226-16142284)
chr2 (4-61)||(28563957-28564014)
chr2 (1-62)||(35588126-35588187)
chr2 (4-61)||(40128929-40128986)
chr2 (11-59)||(42928937-42928985)
chr2 (7-62)||(8803306-8803361)
chr2 (3-58)||(28167331-28167386)
chr2 (21-60)||(44095359-44095398)
chr2 (3-61)||(1841756-1841814)
chr2 (19-61)||(20587039-20587081)
chr2 (19-61)||(20588476-20588518)
chr2 (13-62)||(9660845-9660893)
chr2 (18-63)||(9662192-9662236)
chr2 (9-58)||(13947751-13947800)
chr2 (9-58)||(14088940-14088989)
chr2 (14-62)||(1840156-1840204)
chr2 (9-61)||(9262899-9262951)
chr2 (31-63)||(16289003-16289035)
chr2 (3-62)||(38730063-38730123)
chr2 (14-62)||(44906147-44906195)
[»] chr4 (39 HSPs)
chr4 (3-63)||(22307669-22307729)
chr4 (3-60)||(33609345-33609402)
chr4 (4-62)||(4906128-4906186)
chr4 (1-63)||(54123544-54123606)
chr4 (4-61)||(4931998-4932055)
chr4 (6-62)||(4933335-4933391)
chr4 (6-62)||(29756271-29756327)
chr4 (6-61)||(4907465-4907520)
chr4 (3-58)||(22309139-22309194)
chr4 (4-63)||(29757610-29757669)
chr4 (3-58)||(33607471-33607526)
chr4 (3-63)||(19994496-19994556)
chr4 (3-62)||(21354777-21354837)
chr4 (3-63)||(34538124-34538184)
chr4 (3-62)||(18597855-18597914)
chr4 (4-63)||(23703865-23703924)
chr4 (4-59)||(35786682-35786737)
chr4 (3-62)||(48713463-48713522)
chr4 (4-58)||(38157023-38157077)
chr4 (5-63)||(54534976-54535034)
chr4 (3-63)||(2671539-2671599)
chr4 (3-63)||(19996055-19996115)
chr4 (3-63)||(55948954-55949014)
chr4 (3-62)||(42889811-42889870)
chr4 (3-62)||(42977197-42977256)
chr4 (3-62)||(42978920-42978979)
chr4 (3-62)||(44251604-44251663)
chr4 (3-53)||(9561854-9561904)
chr4 (14-64)||(11148347-11148397)
chr4 (3-61)||(32082634-32082692)
chr4 (3-61)||(39654673-39654731)
chr4 (7-60)||(23702398-23702451)
chr4 (3-59)||(10337106-10337162)
chr4 (4-60)||(35785166-35785222)
chr4 (7-63)||(44253197-44253253)
chr4 (3-63)||(55947358-55947418)
chr4 (4-59)||(22674154-22674209)
chr4 (3-61)||(24919052-24919110)
chr4 (10-58)||(39665274-39665322)
[»] chr1 (53 HSPs)
chr1 (4-63)||(50315316-50315375)
chr1 (3-62)||(24437073-24437132)
chr1 (4-62)||(8323441-8323499)
chr1 (4-62)||(31815772-31815830)
chr1 (3-61)||(46604439-46604497)
chr1 (4-60)||(9626469-9626525)
chr1 (3-63)||(22684151-22684211)
chr1 (4-62)||(31809988-31810046)
chr1 (4-61)||(8322521-8322578)
chr1 (6-63)||(26734424-26734481)
chr1 (14-62)||(10708029-10708077)
chr1 (3-62)||(12095876-12095935)
chr1 (3-62)||(16673257-16673316)
chr1 (3-61)||(13222914-13222972)
chr1 (3-61)||(24438949-24439007)
chr1 (4-62)||(32847813-32847871)
chr1 (3-61)||(33259373-33259431)
chr1 (3-61)||(33279532-33279590)
chr1 (4-62)||(52793703-52793761)
chr1 (3-60)||(16592022-16592079)
chr1 (3-60)||(31027226-31027283)
chr1 (3-63)||(7184321-7184381)
chr1 (3-63)||(7655265-7655325)
chr1 (9-69)||(9419825-9419885)
chr1 (3-63)||(12097941-12098001)
chr1 (3-63)||(31321007-31321067)
chr1 (3-58)||(40767618-40767673)
chr1 (3-58)||(50317051-50317106)
chr1 (3-61)||(7185857-7185915)
chr1 (4-62)||(9627583-9627641)
chr1 (4-62)||(11431331-11431389)
chr1 (1-63)||(14095716-14095778)
chr1 (17-63)||(18604583-18604629)
chr1 (4-62)||(28251930-28251988)
chr1 (4-62)||(33753634-33753692)
chr1 (19-68)||(31034140-31034189)
chr1 (4-61)||(42301622-42301679)
chr1 (3-63)||(13211113-13211173)
chr1 (3-63)||(36145342-36145402)
chr1 (1-61)||(41668273-41668333)
chr1 (14-58)||(44268891-44268935)
chr1 (19-63)||(46652798-46652842)
chr1 (10-61)||(10612138-10612189)
chr1 (11-62)||(31028673-31028724)
chr1 (11-62)||(31035643-31035694)
chr1 (3-62)||(33257880-33257939)
chr1 (3-62)||(33278052-33278111)
chr1 (3-61)||(7653686-7653744)
chr1 (4-62)||(35383058-35383116)
chr1 (10-63)||(19249318-19249371)
chr1 (14-63)||(33981502-33981551)
chr1 (3-62)||(13229274-13229334)
chr1 (3-63)||(28920656-28920716)
[»] scaffold0280 (1 HSPs)
scaffold0280 (3-63)||(12129-12189)
[»] chr8 (22 HSPs)
chr8 (3-63)||(3158038-3158098)
chr8 (3-63)||(39886077-39886137)
chr8 (4-63)||(357975-358034)
chr8 (3-62)||(39884615-39884674)
chr8 (9-61)||(45448499-45448551)
chr8 (4-62)||(36899897-36899955)
chr8 (6-62)||(359318-359374)
chr8 (4-60)||(27339188-27339244)
chr8 (4-63)||(17706163-17706222)
chr8 (3-62)||(22714050-22714109)
chr8 (4-60)||(21142480-21142536)
chr8 (3-63)||(25264338-25264398)
chr8 (4-63)||(17707450-17707509)
chr8 (4-63)||(36901179-36901238)
chr8 (10-60)||(15279641-15279691)
chr8 (10-60)||(15460010-15460060)
chr8 (1-63)||(26720247-26720309)
chr8 (11-62)||(1650219-1650270)
chr8 (4-63)||(7272898-7272957)
chr8 (3-61)||(25265906-25265964)
chr8 (4-62)||(45447004-45447062)
chr8 (3-63)||(33295446-33295506)
[»] scaffold0129 (1 HSPs)
scaffold0129 (4-63)||(4259-4318)
[»] chr6 (16 HSPs)
chr6 (3-61)||(1443417-1443475)
chr6 (4-63)||(19402124-19402183)
chr6 (4-62)||(11065656-11065714)
chr6 (3-62)||(1258441-1258500)
chr6 (4-63)||(7796747-7796806)
chr6 (4-61)||(842186-842243)
chr6 (6-62)||(843524-843581)
chr6 (3-63)||(10707674-10707734)
chr6 (3-62)||(1256713-1256772)
chr6 (7-61)||(8745432-8745486)
chr6 (4-58)||(30321166-30321220)
chr6 (3-60)||(19084121-19084178)
chr6 (3-59)||(8752801-8752857)
chr6 (14-62)||(28048979-28049027)
chr6 (9-63)||(19597984-19598038)
chr6 (3-63)||(10711221-10711281)
[»] scaffold1118 (1 HSPs)
scaffold1118 (7-53)||(2420-2466)
[»] scaffold1176 (1 HSPs)
scaffold1176 (3-62)||(2050-2109)
[»] scaffold0060 (1 HSPs)
scaffold0060 (4-64)||(13253-13313)
[»] scaffold0633 (1 HSPs)
scaffold0633 (1-61)||(6893-6953)
[»] scaffold0489 (1 HSPs)
scaffold0489 (3-63)||(6816-6876)


Alignment Details
Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 11244962 - 11244812
Alignment:
Q  64 caatttttgacattttacctcaattctaagcaatctaatgtaccagaatcatccagaatacatgaaaactaagagaaatgaaatgcatgactctacaaac 163  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  11244962 caatttttgatgttttacctcaattctaagcaatctaatgtaccataatcatccagaatacatgaaaactaaaagaaatgaaatgcatggctctacaaac 11244863  T
Q  164 atgttccaagcaacaattagcat-aaaaggggcactaaagtaagcatgcat 213  Q
    ||||  ||||| ||||||  ||| | || ||| |||||| |||||||||||    
T  11244862 atgtctcaagcgacaattgacatcataaagggtactaaaataagcatgcat 11244812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 46246576 - 46246636
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46246576 atacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccta 46246636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 15561461 - 15561331
Alignment:
Q  64 caatttttgacattttacctcaattctaagcaatctaatgtaccagaatcatccagaatacatgaaaactaagagaaatgaaatgcatgactctacaaac 163  Q
    ||||||||  ||||| |||||||| |||||||| |||||| ||||||||||||||||| | ||||||||||||  |||||||||||||| |  || ||||    
T  15561461 caatttttaccatttcacctcaatcctaagcaacctaatgcaccagaatcatccagaacatatgaaaactaaggaaaatgaaatgcatggcaatataaac 15561362  T
Q  164 atgttccaagcaacaattagcataaaagggg 194  Q
    ||  | ||||||||||||| || ||||||||    
T  15561361 atcattcaagcaacaattaacacaaaagggg 15561331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 12178541 - 12178482
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12178541 atacagggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaagcct 12178482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 46245180 - 46245122
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46245180 atacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcc 46245122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 11669898 - 11669841
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11669898 tacatggacgaaaaccaaaaacatgcgaacttacagggaccgtttacatatttaagcc 11669841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 706800 - 706741
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  706800 tacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccta 706741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 27161997 - 27162056
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  27161997 tacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacatatttaagccta 27162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 12180640 - 12180700
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| ||||||||||||||||  || |||||||| ||||||    
T  12180640 atacagggacgaaaaccaaaaacacgcgaacttacagggacaattaacatattttagccta 12180700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13420287 - 13420347
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||| || ||||||||||| || ||||||||||||||||||    
T  13420287 atacagggactaaaaccaaaaacacgcaaacttacaggggccatttacatatttaagccta 13420347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 38758318 - 38758378
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||  || |||||||||||||||||||| ||||||||||||    
T  38758318 atacagggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaagccta 38758378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 708154 - 708213
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| |||| ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  708154 tacatggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccta 708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 37133650 - 37133709
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||| ||||||||||||||||| |||||||||| |||||  |||||||||||||||||    
T  37133650 atacagtgacgaaaaccaaaaacacgcgaacttacggggacgatttacatatttaagcct 37133709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 41591572 - 41591514
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| |||||   ||||| |||||||||||||||||||||||||||||    
T  41591572 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagcct 41591514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 45277968 - 45278026
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||    
T  45277968 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 45278026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 41385811 - 41385872
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctaca 65  Q
    ||||||||| ||||| |||||   ||||||||||||||||| ||||||||||||||||||||    
T  41385811 tacagggaccaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaagcctaca 41385872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 11671287 - 11671355
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctacaattttt 71  Q
    ||||| |||||||||| ||||||| |||||||||| |||||  ||||||||||||| |||| |||||||    
T  11671287 atacatggacgaaaacaaaaaacacgcgaacttacggggacgatttacatatttaaacctataattttt 11671355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 14774571 - 14774515
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||| |||||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  14774571 atacacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaag 14774515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 15225024 - 15224968
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||| |||||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  15225024 atacacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaag 15224968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 21715130 - 21715070
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||||| |||||||| || || ||||||||||  ||||||||||||||||||    
T  21715130 atacagggacgaaaatcaaaaacacgccaaattacagggacgatttacatatttaagccta 21715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 21716620 - 21716680
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| || || ||||||| ||  ||||||||||||||||||    
T  21716620 atacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaagccta 21716680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 3704452 - 3704397
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||| ||||||||||| ||||  ||||| |||||||||||    
T  3704452 agggacgaaaaccaaaaacaagcgaacttacatggacgatttacctatttaagcct 3704397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 8230128 - 8230069
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||||||||||||  | || ||||||||||  |||||||||||||||||    
T  8230128 atacagggacgaaaaccaaaaacacaccaaattacagggacgatttacatatttaagcct 8230069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 27160362 - 27160303
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||| |   |||||||||| ||||||||||| ||||||||||||    
T  27160362 tacagggacgaaaaccaaaatctcacgaacttacaaggaccttttacttatttaagccta 27160303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 31392116 - 31392057
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| |  || ||||||||||  |||||||||||||||||    
T  31392116 atacagggacgaaaaccaaaaacacgtcaaattacagggacgatttacatatttaagcct 31392057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 31393660 - 31393719
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| |||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  31393660 atacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 31393719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 40028515 - 40028460
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||||||||||||||||||||||| || || ||||||||||  |||||||||||||    
T  40028515 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 40028460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 32429872 - 32429930
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| ||||||||||||  || ||||||||||||| |||||| |||||||||||    
T  32429872 tacagggactaaaaccaaaaacgcgccaacttacagggactttttacttatttaagcct 32429930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37348789 - 37348735
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||| ||||||||||||| |||||||||| |||||| |||||| |||||||||    
T  37348789 agggactaaaaccaaaaacacgcgaacttacggggaccatttacaaatttaagcc 37348735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 38756713 - 38756655
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||| ||||||||||||  || ||||||||||||||||||  |||||||||||    
T  38756713 atacagggactaaaaccaaaaacgcgctaacttacagggacctttttaatatttaagcc 38756655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40030028 - 40030090
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||| |||||| ||||||| || || ||||||||||  ||||||||||||||||||    
T  40030028 atatacagggatgaaaacaaaaaacacgccaaattacagggacgatttacatatttaagccta 40030090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 8231635 - 8231692
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||| ||||||||||||| || || ||||||||||  |||||||||||||||    
T  8231635 atacagggacaaaaaccaaaaacaagccaaattacagggacgatttacatatttaagc 8231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32882714 - 32882774
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||| |||| |||||||||||||||| || ||||||||||  |||||||||||||||||    
T  32882714 atatacatggacaaaaaccaaaaacatgc-aaattacagggacgatttacatatttaagcct 32882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 41593205 - 41593262
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||||||| |||||||||||    |||||||||||||||| ||||||||||||||||    
T  41593205 tacagggaccaaaaccaaaaatgcacgaacttacagggaccatttacatatttaagcc 41593262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 28848600 - 28848556
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||    
T  28848600 caaaaacacgcgaaattacagggacgttttacatatttaagccta 28848556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 37350216 - 37350260
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||    
T  37350216 aaaaccaaaaacacgcgaacttacggggaccatttacatatttaa 37350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 43546747 - 43546791
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||    
T  43546747 caaaaacacgcgaaattacagggacgttttacatatttaagccta 43546791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 25008134 - 25008091
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||    
T  25008134 caaaaacacgcgaaattacagggacgttttacatatttaagcct 25008091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 37547991 - 37547932
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| ||||||||||||   | |||||||| ||||||||||| ||||||||||||    
T  37547991 tacagggactaaaaccaaaaacgcaccaacttacaaggaccttttacttatttaagccta 37547932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 15136946 - 15137000
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| |||||||| ||||| ||||||||||  |||| |||||||||||||    
T  15136946 ggacgaaaatcaaaaacacgcgaatttacagggacgatttatatatttaagccta 15137000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 20208469 - 20208523
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||| |||| ||||||||  | |||||||||||| ||||||||||||||||||    
T  20208469 agggactaaaagcaaaaacacaccaacttacagggatcttttacatatttaagcc 20208523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 41384206 - 41384148
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| ||||| |||||   ||||||||||| ||||| |||||||||||||||||    
T  41384206 tacagggaccaaaacaaaaaatgcgcgaacttacaaggaccatttacatatttaagcct 41384148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 28556303 - 28556246
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||| ||| ||||||||||||| || || ||||||  ||||||||||||||||||||    
T  28556303 tacagagactaaaaccaaaaacacgctaaattacagataccttttacatatttaagcc 28556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 31734766 - 31734815
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||| ||||||||||| ||||  ||||||| ||||||||||    
T  31734766 aaaaccaaaaacacgcgaacttacaaggacgatttacatgtttaagccta 31734815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 37131893 - 37131836
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||||| |||||||||||| ||| ||||||||||  ||||  |||||||||||||||    
T  37131893 atacaggaacgaaaaccaaacacacgcgaacttacgtggacgatttacatatttaagc 37131836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1521121 - 1521165
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggacctttt 48  Q
    |||| |||| ||||| ||||||||||||||||||| |||||||||    
T  1521121 tacatggactaaaacaaaaaacatgcgaacttacatggacctttt 1521165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 39787808 - 39787760
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||||| |||||||| || |||||||| |||||| |||||||||||||    
T  39787808 acgaaaagcaaaaacacgcaaacttacatggacctcttacatatttaag 39787760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 38626171 - 38626230
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38626171 atacatggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 38626230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 38624774 - 38624715
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38624774 atacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 38624715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 16308623 - 16308564
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  16308623 atacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagcct 16308564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 27756786 - 27756846
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||| ||||||| ||||||||| ||||||  ||||||||||||||||||    
T  27756786 atacagggacgaaaacaaaaaacacgcgaacttagagggacgatttacatatttaagccta 27756846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 9672353 - 9672412
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||||| |||||   |||||||||||||||||||||| |||||||||||||    
T  9672353 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttatatatttaagccta 9672412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 28592135 - 28592081
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatattta 57  Q
    |||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||    
T  28592135 atacagggacgaaaataaaaaacacgcgaacttacaaggaccttttacatattta 28592081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 28592421 - 28592477
Alignment:
Q  5 acagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||||||    
T  28592421 acagggacgaaaacaaaaaacacgcgaacttaca-ggacctcttacatatttaagcct 28592477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8874273 - 8874333
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||||| |  || ||||||||||  ||||||||||||||||    
T  8874273 atatacagggacgaaaaccaaaaacaggtcaaattacagggacgatttacatatttaagcc 8874333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16310098 - 16310157
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||| ||| ||||||||||||||||| |||||||||| ||||  |||||||||||||||    
T  16310098 atatataggaacgaaaaccaaaaacatacgaacttacatggacgatttacatatttaagc 16310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 17555004 - 17555063
Alignment:
Q  3 atacagggacgaaaa-ccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||  ||||||||||||||||    
T  17555004 atacagggacgaaaaaccaaaaacacgcgaacttacatggacaatttacatatttaagcc 17555063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 35931350 - 35931405
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||| ||||||||    
T  35931350 tacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacctatttaag 35931405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 13373825 - 13373765
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctac 64  Q
    ||||| ||||||||| |||||    ||||||||||||||||||| ||||||||||||||||    
T  13373825 tacagagacgaaaacaaaaaatggacgaacttacagggacctttgacatatttaagcctac 13373765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 35929579 - 35929523
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||||||||||||| |   |||||||||| ||||||||||| |||||||||    
T  35929579 tacagggacgaaaaccaaaatctcacgaacttacaaggaccttttacttatttaagc 35929523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 11771256 - 11771201
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||||||||| |||||||| || |||||||  | |||||||||||||||||    
T  11771256 atacagggacgaaaatcaaaaacacgcaaacttactcgaaccttttacatatttaa 11771201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 33489900 - 33489959
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||| ||||| ||||||  || ||||||||||||| |||||| |||||||||||    
T  33489900 atacagggactaaaacgaaaaacgcgctaacttacagggacattttacttatttaagcct 33489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 1418937 - 1418995
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| ||||||| |  || ||||||||||  ||||||||||||||||    
T  1418937 atacagggacgaaaacaaaaaacacgtcaaattacagggacgatttacatatttaagcc 1418995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 30332341 - 30332283
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| ||||| | || || ||||||||||  ||||||||||||||||    
T  30332341 atacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagcc 30332283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 18201354 - 18201403
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||| ||||||| || |||||||||||||  |||||||||||||||    
T  18201354 acgaaaacaaaaaacacgcaaacttacagggacaatttacatatttaagc 18201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8872578 - 8872522
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||||| |||||||||||||||| || || ||||||||||   |||||||||||||    
T  8872578 atacaggaacgaaaaccaaaaacacgccaaattacagggacgaattacatatttaag 8872522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 25916279 - 25916335
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    |||||||||| ||||||||||||| || || ||||| ||||  ||||||||||||||    
T  25916279 atacagggacaaaaaccaaaaacacgccaaattacatggacgatttacatatttaag 25916335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36619602 - 36619546
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||||||||||||| |||||||| || || ||| ||||||  ||||||||||||||    
T  36619602 atacagggacgaaaatcaaaaacacgccaaattatagggacgatttacatatttaag 36619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 39103420 - 39103472
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||| || || ||||| ||||  ||||||||||||||||||    
T  39103420 acgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagccta 39103472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 41281904 - 41281872
Alignment:
Q  31 aacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||| ||||||||||||    
T  41281904 aacttacagggaccttttacttatttaagccta 41281872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 41081860 - 41081801
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41081860 atacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 41081801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 32558976 - 32558917
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  32558976 tacagggacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaagccta 32558917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 40499253 - 40499312
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40499253 atacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 40499312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 31796835 - 31796893
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31796835 atacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcc 31796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 41083272 - 41083332
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  41083272 atacggggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagccta 41083332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 48567054 - 48566995
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  48567054 atacagtgacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagcct 48566995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31795431 - 31795373
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  31795431 atacagggccgaaaaccaaaaacacgcgaacttacagggaccttttacgtatttaagcc 31795373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 48568531 - 48568589
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  48568531 atacggggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaagcc 48568589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 3026883 - 3026941
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  3026883 tacagggactaaaaccaaaaacgtgccaacttacagggaccttttacttatttaagcct 3026941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 32613941 - 32613883
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaac-ttacagggaccttttacatatttaagcc 61  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  32613941 tacagggacgaaaaccaaaaacacgcgaactttacaaggaccttttacatatttaagcc 32613883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 32615648 - 32615702
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  32615648 tacagggacaaaaacaaaaaacacgcgaacttacagggaccttttacatatttaa 32615702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22942396 - 22942339
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||    
T  22942396 atatacagggatgaaaaccaaaaacaagcgaacttacagggacgatttacatatttaa 22942339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 3150020 - 3150080
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||  |  |||||||||||||||||||||||||||||||||    
T  3150020 atacagggactaaaaccaaaaacgcgttaacttacagggaccttttacatatttaagccta 3150080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 32559885 - 32559945
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctac 64  Q
    |||||||| |||||  ||||||| |||||||||||| ||||||||||||||||||||||||    
T  32559885 tacagggatgaaaataaaaaacacgcgaacttacagagaccttttacatatttaagcctac 32559945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 24613614 - 24613669
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||||||||||||| |||||   ||||||||||||||||||||||||||||||||    
T  24613614 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaag 24613669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 24612329 - 24612279
Alignment:
Q  10 gacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  24612329 gacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagc 24612279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 33780714 - 33780656
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| ||||| | |||||||||||||||| |||||||| |||||||||    
T  33780714 tacagggacgaaaacaaaaaatacgcgaacttacagggacattttacatttttaagcct 33780656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 33781496 - 33781550
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||| |||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  33781496 tacaaggacgaaaacaaaaaacgcgcgaacttacagggaccttttacatatttaa 33781550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 31199306 - 31199249
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| |||| | ||||| |||||||||||||||||||||| |||||    
T  31199306 tacagggacgaaaacctaaaatacgcgaaattacagggaccttttacatattcaagcc 31199249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 31657011 - 31656956
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||| ||||||||||||||||||||| || ||||||||||  |||||||||||||    
T  31657011 atacaaggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaa 31656956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33733023 - 33732964
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||| |||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  33733023 atacaggaacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 33732964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 8391443 - 8391400
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||    
T  8391443 caaaaacacgcgaaattacagggacgttttacatatttaagcct 8391400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 25529922 - 25529977
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||| ||||||||||||  || |||||||| ||||||||||| |||||||||||    
T  25529922 agggactaaaaccaaaaacgcgccaacttacaaggaccttttacttatttaagcct 25529977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 30700354 - 30700299
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||| |||||||||||||||||| ||||||||| || |||  |||||||||||||    
T  30700354 atacaaggacgaaaaccaaaaacacgcgaacttaaagagacgatttacatatttaa 30700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 53528028 - 53527969
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||| ||||||  |||||| ||||||||||    
T  53528028 atacagggacgaaaaccaaaaacacgccaaattaaagggacgatttacacatttaagcct 53527969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 53529535 - 53529594
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||| ||||| | || || ||||||||||  |||||||||||||||||    
T  53529535 atacagggacgaaaactaaaaatacgccaaattacagggacgatttacatatttaagcct 53529594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44458652 - 44458594
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||| ||||||||| ||| ||||   |||||||||||||| ||||||||||||||||||    
T  44458652 tacaaggacgaaaatcaagaacacatgaacttacagggactttttacatatttaagcct 44458594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3149320 - 3149260
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| |||| |||||| |||||  || |||||||||||||||||||| ||||||| ||||    
T  3149320 atacatggactaaaacccaaaactggctaacttacagggaccttttacttatttaaaccta 3149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 41879982 - 41879922
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||| |||||||||||||||||  |||||||||||  ||  ||||||||||||| ||||    
T  41879982 atacagagacgaaaaccaaaaacacacgaacttacagaaacgatttacatatttaaaccta 41879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 40304763 - 40304821
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40304763 atacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcc 40304821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 40303351 - 40303291
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40303351 atacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccta 40303291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 45493033 - 45493093
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  45493033 atacagggacgaaaaccaaaaacacgcgaatttacagggaccttttacatatttaagccta 45493093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 45500775 - 45500835
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  45500775 atacagggacgaaaaccaaaaacacgcgaatttacagggaccttttacatatttaagccta 45500835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 45499363 - 45499304
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45499363 atacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagcct 45499304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 44097354 - 44097413
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  44097354 atacagggacgaaaaccaaaaacacgcgaacttacagagaccttttatatatttaagcct 44097413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22054391 - 22054333
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  22054391 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 22054333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 22060485 - 22060538
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22060485 agggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagc 22060538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 6844098 - 6844158
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6844098 atacaaggatgaaaaccaaaaacacgcgaacttacaaggaccttttacatatttaagccta 6844158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 7317448 - 7317392
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  7317448 atacaaggacgaaaaccaaaaacacgcgaacttacagggatcttttacatatttaag 7317392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 16143597 - 16143662
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctacaatt 68  Q
    ||||||||||||||| |||||||| || | ||||| ||||||||||||||||||||||||| ||||    
T  16143597 atacagggacgaaaatcaaaaacacgcaagcttacggggaccttttacatatttaagcctaaaatt 16143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 22060162 - 22060219
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  22060162 tacagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaagcc 22060219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 22053183 - 22053123
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||| ||||||| |||||||||||  |||||||||||||||||| ||||    
T  22053183 atacagggacgaaaacaaaaaacacgcgaacttacaaagaccttttacatatttaaaccta 22053123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 28165716 - 28165656
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||  || |||||||| ||||||||||||||||||||||||    
T  28165716 atacagggactaaaaccaaaaacgcgctaacttacatggaccttttacatatttaagccta 28165656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 6842773 - 6842718
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  6842773 atacagggatgaaaaccaaaaacacgcaaacttacaggaaccttttacatatttaa 6842718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18224847 - 18224905
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| |||||||||||||  | || |||||||||||||||||||||||||||||    
T  18224847 tacagggactaaaaccaaaaacacactaaattacagggaccttttacatatttaagcct 18224905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 43516455 - 43516397
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| |||||   ||||| |||||||||||||||||||||||||||||    
T  43516455 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaagcct 43516397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 44820932 - 44820990
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| |||||   ||||| |||||||||||||||||||||||||||||    
T  44820932 tacagggacgaaaacaaaaaatgcgcgaatttacagggaccttttacatatttaagcct 44820990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 44465091 - 44465147
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||| |||||| ||||||||||| ||||||||||||||||  ||||||||||||||    
T  44465091 atacaaggacgagaaccaaaaacacgcgaacttacagggacgatttacatatttaag 44465147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 44492316 - 44492372
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||| || |||||||| ||| | ||||||||||||||||||    
T  44492316 agggacgaaaaccaaaaacacgcaaacttacatggatcgtttacatatttaagccta 44492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 28563434 - 28563375
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| |||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  28563434 atacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 28563375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 10344046 - 10343988
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| |||||    |||||||||| ||||||||||||||||||||||    
T  10344046 atacagggacgaaaacaaaaaatgcacgaacttacatggaccttttacatatttaagcc 10343988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 16142284 - 16142226
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||| ||||||||||||||||| ||||||||||| ||||  ||||||||||| ||||    
T  16142284 atacagagacgaaaaccaaaaacacgcgaacttacaaggacgatttacatattttagcc 16142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 28563957 - 28564014
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||| |||| |||||    
T  28563957 tacagggacgaaaaccaaaatctcgcgaacttacaaggaccttttacttattaaagcc 28564014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35588187 - 35588126
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||| ||||||||||||||| || ||||||||||| ||||  ||| |||||||||||||    
T  35588187 atatacatggacgaaaaccaaaagcacgcgaacttacatggacgatttccatatttaagcct 35588126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 40128929 - 40128986
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||||||||||||| |||||   ||||| ||||||||||||||||||||| ||||||    
T  40128929 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatgtaagcc 40128986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 42928985 - 42928937
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||||||||||||   |||||||||||| |||||||||||||||||||    
T  42928985 acgaaaaccaaaaatgcgcgaacttacagagaccttttacatatttaag 42928937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 8803306 - 8803361
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||||| ||||||||||||||  |||  ||||| |||||||||||    
T  8803306 agggacgaaaaccaaaatcatgcgaacttacaaagacgatttacttatttaagcct 8803361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 28167331 - 28167386
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||| |||| ||||||||||||  || |||||||||||||||||||| |||||||    
T  28167331 atacaaggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaa 28167386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 44095398 - 44095359
Alignment:
Q  21 aaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  44095398 aaaacacgcgaacttacatggaccttttacatatttaagc 44095359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 1841756 - 1841814
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||| ||||||||||||| || || || |||||||  ||||||||||||||||    
T  1841756 atacagggacaaaaaccaaaaacacgccaaatttcagggacgatttacatatttaagcc 1841814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 20587081 - 20587039
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||| ||||| |||||||||| |||||||||||||||||    
T  20587081 caaaaacacgcgaaattacagggacgttttacatatttaagcc 20587039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 20588476 - 20588518
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||| ||||| |||||||||| |||||||||||||||||    
T  20588476 caaaaacacgcgaaattacagggacgttttacatatttaagcc 20588518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 9660893 - 9660845
Alignment:
Q  13 gaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  9660893 gaaaaccaaaaacacgcgaacttaca-tgaccttttatatatttaagcct 9660845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 9662192 - 9662236
Alignment:
Q  18 ccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  9662192 ccaaaaacacgcgaacttccagggacc-tttacatatttaagccta 9662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 13947800 - 13947751
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||||||||||||||||| || || ||||||||||  |||||||||||||    
T  13947800 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 13947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 14088989 - 14088940
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||||||||||||||||| || || ||||||||||  |||||||||||||    
T  14088989 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 14088940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 1840204 - 1840156
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||| || || ||||||||||  |||||||||||||||||    
T  1840204 aaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 1840156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 9262899 - 9262951
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||| ||||||||| ||  ||||||||||||| ||||||||| ||||||||||    
T  9262899 ggactaaaaccaaatacgcgcgaacttacaggaaccttttacttatttaagcc 9262951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 16289003 - 16289035
Alignment:
Q  31 aacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||| ||||||||||||||||||||    
T  16289003 aacttacagggatcttttacatatttaagccta 16289035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 38730063 - 38730123
Alignment:
Q  3 atacagggacgaaaa-ccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| ||||||||| ||||||||||| |||   |||| ||||||||||||    
T  38730063 atacagggacgaaaaaccaaaaacacgcgaacttacaaggatgatttatatatttaagcct 38730123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 44906147 - 44906195
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||  || |||||| ||||||||||||| |||||||||||    
T  44906147 aaaaccaaaaacgcgctaacttatagggaccttttacttatttaagcct 44906195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 22307729 - 22307669
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22307729 atacagggactaaaaccaaaaacatgcgaacttacagggaccttttgcatatttaagccta 22307669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 33609345 - 33609402
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33609345 atacaaggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagc 33609402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 4906186 - 4906128
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  4906186 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 4906128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 54123544 - 54123606
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||    
T  54123544 atatacagggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaagccta 54123606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 4932055 - 4931998
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  4932055 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcc 4931998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 4933335 - 4933391
Alignment:
Q  6 cagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  4933335 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 4933391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 29756327 - 29756271
Alignment:
Q  6 cagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  29756327 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 29756271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 4907465 - 4907520
Alignment:
Q  6 cagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  4907465 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcc 4907520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 22309139 - 22309194
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  22309139 atacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 22309194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 29757610 - 29757669
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||    
T  29757610 tacagggacgaaaaccaaaaatgcgtgaacttacagggaccttttacatatttaagccta 29757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 33607526 - 33607471
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33607526 atacaaggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaa 33607471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 19994556 - 19994496
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||    
T  19994556 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 19994496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 21354777 - 21354837
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaa-cttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||    
T  21354777 atacagggacgaaaatcaaaaacacgcgaaacttacagggatcttttacatatttaagcct 21354837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 34538184 - 34538124
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| |||| |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  34538184 atacaaggactaaaaccaaaaacgtgctaacttaccgggaccttttacatatttaagccta 34538124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 18597855 - 18597914
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  18597855 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 18597914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23703865 - 23703924
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||    
T  23703865 tacagggatgaaaaccaaaaatgcgcgaacttagagggaccttttacatatttaagccta 23703924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 35786682 - 35786737
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    |||| ||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  35786682 tacaaggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaag 35786737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 48713463 - 48713522
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  48713463 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 48713522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 38157077 - 38157023
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||||||||||||||||| |||||||||||||||   |||||||||||||    
T  38157077 tacagggacgaaaaccaaaaacacgcgaacttacagggatgatttacatatttaa 38157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 54535034 - 54534976
Alignment:
Q  5 acagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||||||||||||| ||||    
T  54535034 acagggacgaaaaccaaaaacacgcgaacttacatggacgatttacatatttaaaccta 54534976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 2671599 - 2671539
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| |||||||||||   ||||||||||||||||||||| | ||||||||||||    
T  2671599 atacagggactaaaaccaaaaatgcgcgaacttacagggacctttttcttatttaagccta 2671539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 19996055 - 19996115
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||| || || ||||||||||  ||||||||||||||||||    
T  19996055 atacagggaccaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 19996115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 55948954 - 55949014
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| || || ||||| ||||  ||||||||||||||||||    
T  55948954 atacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagccta 55949014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 42889811 - 42889870
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| |||||||||| ||||||| | ||||||||||||||  |||||||||||||||||    
T  42889811 atacaaggacgaaaacaaaaaacacgtgaacttacagggacgatttacatatttaagcct 42889870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 42977256 - 42977197
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||| ||||  |||||||||||||||||    
T  42977256 atacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcct 42977197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 42978920 - 42978979
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||| ||||  |||||||||||||||||    
T  42978920 atacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcct 42978979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 44251663 - 44251604
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| |||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  44251663 atacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 44251604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 9561904 - 9561854
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacata 53  Q
    |||||| ||||||||||||||||| ||||||||||||||||  ||||||||    
T  9561904 atacagagacgaaaaccaaaaacacgcgaacttacagggacgatttacata 9561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 11148397 - 11148347
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctac 64  Q
    ||||||||||||  || |||||||||||||||||||| |||||||||||||    
T  11148397 aaaaccaaaaacgcgctaacttacagggaccttttacttatttaagcctac 11148347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 32082634 - 32082692
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| || || ||||| ||||  ||||||||||||||||    
T  32082634 atacagggacgaaaaccaaaaacacgccaaattacacggacgatttacatatttaagcc 32082692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 39654673 - 39654731
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||| |||||||||||||| || || |||||||||||| |||||| |||||||||||    
T  39654673 atacagtgacgaaaaccaaaatcacgccaacttacagggatcttttaaatatttaagcc 39654731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 23702451 - 23702398
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||||| |||||   ||||||||||| |||||||||||||||||||||    
T  23702451 agggacgaaaacaaaaaatgcgcgaacttacaaggaccttttacatatttaagc 23702398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 10337162 - 10337106
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    ||||| |||||||||||||||||| || || ||||||||||  ||||||||||||||    
T  10337162 atacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaag 10337106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 35785222 - 35785166
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||||||| ||||| ||||| | ||||||||||| ||| |||||||||||||||||    
T  35785222 tacagggacaaaaacaaaaaatacgcgaacttacatggatcttttacatatttaagc 35785166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 44253197 - 44253253
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||| || || ||| ||||||  ||||||||||||||||||    
T  44253197 agggacgaaaaccaaaaacacgccaaattaaagggacgatttacatatttaagccta 44253253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 55947418 - 55947358
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||| | |  || ||||||||||  ||||||||||||||||||    
T  55947418 atacagggacgaaaaccaaaaatacgtcaaattacagggacgatttacatatttaagccta 55947358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 22674209 - 22674154
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    |||| |||||||||| |||||   ||||||||| ||||||||||||||||||||||    
T  22674209 tacaaggacgaaaacaaaaaatgcgcgaacttatagggaccttttacatatttaag 22674154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 24919110 - 24919052
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||||| ||||| |||||||||| || |||||||||| ||  ||||||||||||||||    
T  24919110 atacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttacatatttaagcc 24919052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 39665322 - 39665274
Alignment:
Q  10 gacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||| |||||   ||||||||||||||||| |||||||||||||    
T  39665322 gacgaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaa 39665274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 50315375 - 50315316
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50315375 tacagagacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccta 50315316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 24437132 - 24437073
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  24437132 atacagtgacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaagcct 24437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8323441 - 8323499
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  8323441 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 8323499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 31815772 - 31815830
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  31815772 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 31815830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 46604497 - 46604439
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  46604497 atacaaggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaagcc 46604439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 9626525 - 9626469
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  9626525 tacagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaagc 9626469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 22684151 - 22684211
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  22684151 atacatggacgaaaaccaaaaacacgcgaacttacaaggaccttttacatattaaagccta 22684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 31810046 - 31809988
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  31810046 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagcct 31809988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 8322578 - 8322521
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||    
T  8322578 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagcc 8322521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 26734481 - 26734424
Alignment:
Q  6 cagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  26734481 cagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaagccta 26734424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 10708077 - 10708029
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaagcct 10708029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 12095935 - 12095876
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||| ||||||||||||   |||||||||||||||||||||| |||||||||||    
T  12095935 atacagggactaaaaccaaaaacgcacgaacttacagggaccttttacttatttaagcct 12095876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16673257 - 16673316
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  16673257 atacagggacgaaaaccaaaaacacgcaaaattacagggacgatttacatatttaagcct 16673316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 13222972 - 13222914
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||| |||| |||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  13222972 atacacggactaaaaccaaaaacgtgctaacttacagggaccttttacttatttaagcc 13222914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 24438949 - 24439007
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| ||||| ||||||||||  ||||||||||| ||||    
T  24438949 atacagggacgaaaaccaaaaacacgcgaatttacagggacgatttacatattttagcc 24439007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 32847871 - 32847813
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| ||||||||||||  || |||||||||||||||||||| |||||||||||    
T  32847871 tacagggactaaaaccaaaaacgcgccaacttacagggaccttttacttatttaagcct 32847813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 33259373 - 33259431
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||    
T  33259373 atacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagcc 33259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 33279532 - 33279590
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||    
T  33279532 atacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagcc 33279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 52793761 - 52793703
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||| |||||   |||||||||||||||||||| ||||||||||||||    
T  52793761 tacagggacgaaaacaaaaaatgagcgaacttacagggacctttaacatatttaagcct 52793703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 16592079 - 16592022
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||||||||||||||||| || || ||||||||||  |||||||||||||||    
T  16592079 atacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagc 16592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 31027283 - 31027226
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||| || ||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  31027283 atacagagaagaaaagcaaaaacatacgaacttacatggaccttttacatatttaagc 31027226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 7184381 - 7184321
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||| ||||||||||||||||| ||||||||||| | ||  ||||||||||||||||||    
T  7184381 atacagagacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaagccta 7184321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 7655265 - 7655325
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| || || ||||||| ||  ||||||||||||||||||    
T  7655265 atacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaagccta 7655325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 9419825 - 9419885
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctacaattt 69  Q
    |||| |||| |||||||| || |||||||| |||||||||||||||||||||||| |||||    
T  9419825 ggactaaaagcaaaaacacgccaacttacaaggaccttttacatatttaagcctaaaattt 9419885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 12097941 - 12098001
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| |||||||||||   |||||||||| |||||||||||| ||||||||||||    
T  12097941 atacagggactaaaaccaaaaatgcgcgaacttacggggaccttttacttatttaagccta 12098001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 31321067 - 31321007
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| |||||||||||||||   ||||  ||||||||||||    
T  31321067 atacagggacgaaaaccaaaaacacgcgaacttacagggatgatttaactatttaagccta 31321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 40767673 - 40767618
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||||||||| ||||||||||||  || ||||||||| ||||||||||||||||||    
T  40767673 atacagggactaaaaccaaaaacgcgcaaacttacagagaccttttacatatttaa 40767618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 50317051 - 50317106
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||    
T  50317051 atacagggacgaaaatcaaaaacacgcgaacttacatggacgatttacatatttaa 50317106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 7185857 - 7185915
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| |||||||||| |||||||| ||||  ||| ||||||||||||    
T  7185857 atacagggacgaaaacaaaaaacatgcaaacttacaaggacgatttgcatatttaagcc 7185915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 9627583 - 9627641
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||| |||||||| |||||   |||||||||||| ||||||||||||||||||||||    
T  9627583 tacaggaacgaaaacaaaaaatgcgcgaacttacagagaccttttacatatttaagcct 9627641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 11431331 - 11431389
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||||||    
T  11431331 tacagggactaaaacgaaaaacgcgccaacttacagggaccttttacttatttaagcct 11431389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14095778 - 14095716
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||| |||||||||  ||||||| ||||||||||| | ||||||||||||||||| ||||    
T  14095778 atatacatggacgaaaataaaaaacacgcgaacttacatgaaccttttacatatttaaaccta 14095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 18604583 - 18604629
Alignment:
Q  17 accaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  18604583 accaaaagcacgcgaacttacagggatcttttacatatttaagccta 18604629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 28251988 - 28251930
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||   || || ||||||||||||||| |||||||||||||    
T  28251988 tacagggacgaaaaccaaaaatgcgctaaattacagggaccttttgcatatttaagcct 28251930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 33753692 - 33753634
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||| ||| |||||||    
T  33753692 tacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacctatgtaagcct 33753634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 31034189 - 31034140
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagcctacaatt 68  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||| ||||    
T  31034189 caaaaacatacgaacttacatggactttttacatatttaagcctaaaatt 31034140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 42301622 - 42301679
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||| |||||||||| ||||| | ||||||||| ||| ||||||||||||||||||||    
T  42301622 tacaaggacgaaaacaaaaaatacgcgaacttagaggaaccttttacatatttaagcc 42301679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13211113 - 13211173
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||||||||||||||  | ||||||||||||   ||||||||||||| ||||    
T  13211113 atacagggacgaaaaccaaaaacacacaaacttacagggaagatttacatatttaaaccta 13211173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 36145402 - 36145342
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||| ||||| | || || ||||||||||  ||||||||||||||||||    
T  36145402 atacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagccta 36145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41668333 - 41668273
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||| ||||||||||||||||| || || |||||| |||  ||||||||||||||||    
T  41668333 atatacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaagcc 41668273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 44268935 - 44268891
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||    
T  44268935 aaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 46652798 - 46652842
Alignment:
Q  19 caaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||    
T  46652798 caaaaacacgcgaaattacagggacgttttacatatttaagccta 46652842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 10612138 - 10612189
Alignment:
Q  10 gacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||| ||||||||  |||||||| | ||||||||||||||||||||||    
T  10612138 gacgaaaagcaaaaacacacgaacttataaggaccttttacatatttaagcc 10612189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 31028673 - 31028724
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||| |||||||| ||||||||| | |||||||||| ||||||||||||    
T  31028673 acgaaaagcaaaaacacgcgaacttataaggaccttttatatatttaagcct 31028724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 31035643 - 31035694
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||| |||||||| ||||||||| | |||||||||| ||||||||||||    
T  31035643 acgaaaagcaaaaacacgcgaacttataaggaccttttatatatttaagcct 31035694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33257939 - 33257880
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| |||| ||||||||||||| || || ||||||||||  |||||||||||||||||    
T  33257939 atacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 33257880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 33278111 - 33278052
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||| |||| ||||||||||||| || || ||||||||||  |||||||||||||||||    
T  33278111 atacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 33278052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 7653744 - 7653686
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| ||||| | || || ||||||||||  ||||||||||||||||    
T  7653744 atacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagcc 7653686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 35383058 - 35383116
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| ||||||||||||  || ||||||  |||||||||||| |||||||||||    
T  35383058 tacagggactaaaaccaaaaacgcgccaacttatcgggaccttttacttatttaagcct 35383116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 19249371 - 19249318
Alignment:
Q  10 gacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||  | || ||||||||||  ||||||||||||||||||    
T  19249371 gacgaaaaccaaaaacaatccaaattacagggacgatttacatatttaagccta 19249318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 33981551 - 33981502
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||  |||||||| ||||||  ||||||||||||||||||    
T  33981551 aaaaccaaaaacacacgaacttatagggacgatttacatatttaagccta 33981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 13229274 - 13229334
Alignment:
Q  3 atacagggacgaaaaccaaaaa-catgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||  ||||||||||| |  || |||||||||||||||||| |||||||||||||    
T  13229274 atacagggattaaaaccaaaaaacgcgctaacttacagggaccttttgcatatttaagcct 13229334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 28920656 - 28920716
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||| ||||||| || || ||||||||||   |||||||||||||||||    
T  28920656 atacagggacaaaaacaaaaaacacgccaaattacagggacgacttacatatttaagccta 28920716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 12189 - 12129
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  12189 atacagggacgaaaaccaaaaacacgcgaacttaccggaaccttttacatatttaagccta 12129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 3158038 - 3158098
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  3158038 atacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaagccta 3158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 39886077 - 39886137
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  39886077 atacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaagccta 39886137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 358034 - 357975
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  358034 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagccta 357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 39884674 - 39884615
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  39884674 atacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaagcct 39884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 45448499 - 45448551
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  45448499 ggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaagcc 45448551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 36899955 - 36899897
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||| ||||||||||||| || || |||||||||||||||||||||||||||||    
T  36899955 tacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagcct 36899897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 359318 - 359374
Alignment:
Q  6 cagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  359318 cagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagcct 359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 27339188 - 27339244
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  27339188 tacaggaacgaaaacaaaaaacatgcgaacttacagggatcttttatatatttaagc 27339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 17706222 - 17706163
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| |||| ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  17706222 tacaaggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccta 17706163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 22714050 - 22714109
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||||||||||||||  ||||||||||||| |  |||||||||||||||||    
T  22714050 atacagggacgaaaaccaaaaacacacgaacttacaggggcgatttacatatttaagcct 22714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 21142536 - 21142480
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||| |||||||||| |||||   |||||||||||||||||||||||||||||||||    
T  21142536 tacaaggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagc 21142480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 25264398 - 25264338
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| |||||||||||||||||| || || ||||||||||  ||||||||||||||||||    
T  25264398 atacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccta 25264338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 17707450 - 17707509
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| ||||||||||||| || || ||||| ||||| ||||||||||||||||||    
T  17707450 tacagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaagccta 17707509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 36901179 - 36901238
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||| ||| |||| |||||||| || || ||||||||||||||||||||||||||||||    
T  36901179 tacagagactaaaaacaaaaacacgctaaattacagggaccttttacatatttaagccta 36901238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 15279641 - 15279691
Alignment:
Q  10 gacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||||||||||||||| ||||||||||| ||||  |||||||||||||||    
T  15279641 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaagc 15279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 15460010 - 15460060
Alignment:
Q  10 gacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    ||||||||||||||||| ||||||||||| ||||  |||||||||||||||    
T  15460010 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaagc 15460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26720247 - 26720309
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| ||||||||||||||||||||| |||||||||  ||||   ||||||||||||||||||    
T  26720247 atatgcagggacgaaaaccaaaaacacgcgaacttatggggattatttacatatttaagccta 26720309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 1650219 - 1650270
Alignment:
Q  11 acgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||| ||||||| ||||||||||| ||||  |||||||||||||||||    
T  1650219 acgaaaactaaaaacacgcgaacttacaaggacggtttacatatttaagcct 1650270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 7272957 - 7272898
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| |||||||||||   || ||||||||| |||||||||| ||||||||||||    
T  7272957 tacagggactaaaaccaaaaatgcgccaacttacagagaccttttacttatttaagccta 7272898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 25265906 - 25265964
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||| ||||||| || || |||||| |||  ||||||||||||||||    
T  25265906 atacagggacgaaaacaaaaaacacgccaaattacagagacgatttacatatttaagcc 25265964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 45447062 - 45447004
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||| || |||||||||||| |||| |||||||||||| |||| | |||||||||||    
T  45447062 tacaggaactaaaaccaaaaacgtgcggacttacagggacatttttcttatttaagcct 45447004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 33295446 - 33295506
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||| ||||| ||||||| || || |||||| |||  ||||||||||||||||||    
T  33295446 atacagggacaaaaacaaaaaacacgccaaattacagagacgatttacatatttaagccta 33295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 4259 - 4318
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  4259 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagccta 4318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 1443475 - 1443417
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  1443475 atacagggacgaaaaccaaaaacacgtgaacttacagggacctttcacatatttaagcc 1443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 19402124 - 19402183
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||    
T  19402124 tacagggacgaaaacaaaaaatgtgcgaacttacaaggaccttttacatatttaagccta 19402183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 11065656 - 11065714
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||    
T  11065656 tacagggacgaaaaccaaaaatgcgcgaacttacaaggaccttttacatatttaagcct 11065714  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 1258441 - 1258500
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||||||||  |||||||||||||||||    
T  1258441 atacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcct 1258500  T

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Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 7796806 - 7796747
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| |||||||||||   |||||||||| |||||||||||||||||||||||||    
T  7796806 tacagggacaaaaaccaaaaatgcgcgaacttactgggaccttttacatatttaagccta 7796747  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 842243 - 842186
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    ||||||||||||||| |||||   ||||||||||||||||||| ||||||||||||||    
T  842243 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttatacatatttaagcc 842186  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 843524 - 843581
Alignment:
Q  6 cagggacgaaaa-ccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||| |||||||   |||||||||||||||||||||||||||||||||||    
T  843524 cagggacgaaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagcct 843581  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 10707734 - 10707674
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||||||||||||||  ||||||| ||||||||||||||||  |||| |||||||||||||    
T  10707734 atacagggacgaaaataaaaaacacgcgaacttacagggacaatttatatatttaagccta 10707674  T

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Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 1256772 - 1256713
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    |||||||||||||||||||||||| || || ||||| ||||  |||||||||||||||||    
T  1256772 atacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaagcct 1256713  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8745486 - 8745432
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||||||||||||||| || || ||||||||||  ||||||||||||||||    
T  8745486 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagcc 8745432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 30321166 - 30321220
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 58  Q
    |||||||||||||||||||||    ||||||||||| ||||||||||||||||||    
T  30321166 tacagggacgaaaaccaaaaatgcacgaacttacagagaccttttacatatttaa 30321220  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 19084121 - 19084178
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagc 60  Q
    |||||||||| ||||||||||||| || || ||||||||||  |||||||||||||||    
T  19084121 atacagggacaaaaaccaaaaacacgctaaattacagggacggtttacatatttaagc 19084178  T

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Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 8752801 - 8752857
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaag 59  Q
    |||||||||||||||||||||||| || || |||||| |||  ||||||||||||||    
T  8752801 atacagggacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaag 8752857  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 28049027 - 28048979
Alignment:
Q  14 aaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||||| |||||||||||| ||||||| | ||||||||||||    
T  28049027 aaaaccaaaaacacgcgaacttacagagacctttgatatatttaagcct 28048979  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 19597984 - 19598038
Alignment:
Q  9 ggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    |||| |||||||||||   ||| ||||||||||||| ||||||||||||||||||    
T  19597984 ggaccaaaaccaaaaatgcgcggacttacagggaccatttacatatttaagccta 19598038  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 10711281 - 10711221
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||||| |||||  ||||||||| ||| ||||||| ||  ||||||||||||||||||    
T  10711281 atacagggaagaaaataaaaaacatgtgaatttacaggaacaatttacatatttaagccta 10711221  T

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Target: scaffold1118 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 2466 - 2420
Alignment:
Q  7 agggacgaaaaccaaaaacatgcgaacttacagggaccttttacata 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  2466 agggacgaaaaccaaaaacacgcgaacttacagggaccttttacata 2420  T

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Target: scaffold1176 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 2109 - 2050
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcct 62  Q
    ||||||||||| |||||||||||| ||||||||||| |||| |||| |||||||||||||    
T  2109 atacagggacggaaaccaaaaacacgcgaacttacaaggacatttttcatatttaagcct 2050  T

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Target: scaffold0060 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 13253 - 13313
Alignment:
Q  4 tacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcctac 64  Q
    |||||| |||||||| |||||   | |||||||||||||||||||||||||||||||||||    
T  13253 tacaggaacgaaaacaaaaaatgcgtgaacttacagggaccttttacatatttaagcctac 13313  T

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Target: scaffold0633 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6893 - 6953
Alignment:
Q  1 atatacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagcc 61  Q
    |||||||| ||||||||||||||||| || || |||||| |||  ||||||||||||||||    
T  6893 atatacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaagcc 6953  T

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Target: scaffold0489 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 6816 - 6876
Alignment:
Q  3 atacagggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaagccta 63  Q
    ||||||| || ||||||||||||| || || |||||| |||  ||||||||||||||||||    
T  6816 atacaggaacaaaaaccaaaaacacgccaaattacagagacgatttacatatttaagccta 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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