View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17147_low_2 (Length: 393)

Name: NF17147_low_2
Description: NF17147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17147_low_2
NF17147_low_2
[»] chr1 (59 HSPs)
chr1 (35-387)||(31735838-31736189)
chr1 (35-379)||(27337255-27337597)
chr1 (35-314)||(47905955-47906232)
chr1 (20-313)||(24325347-24325639)
chr1 (35-319)||(9463563-9463846)
chr1 (20-318)||(15295146-15295444)
chr1 (35-313)||(9459736-9460013)
chr1 (35-313)||(27339447-27339730)
chr1 (35-313)||(39931762-39932039)
chr1 (36-313)||(17324950-17325227)
chr1 (125-387)||(6997140-6997395)
chr1 (40-313)||(28998571-28998844)
chr1 (40-313)||(29004287-29004560)
chr1 (115-313)||(48664852-48665050)
chr1 (20-286)||(21948489-21948756)
chr1 (115-313)||(2949617-2949815)
chr1 (121-313)||(4131690-4131882)
chr1 (128-314)||(6115532-6115719)
chr1 (123-313)||(45693834-45694024)
chr1 (198-313)||(46432521-46432636)
chr1 (115-275)||(6996067-6996221)
chr1 (35-201)||(46432041-46432207)
chr1 (160-313)||(16561131-16561284)
chr1 (35-190)||(2510641-2510800)
chr1 (147-303)||(13785662-13785835)
chr1 (147-233)||(11693580-11693666)
chr1 (315-387)||(8347833-8347905)
chr1 (115-179)||(26520516-26520580)
chr1 (112-174)||(6115479-6115541)
chr1 (232-303)||(32260746-32260817)
chr1 (308-379)||(50077188-50077259)
chr1 (147-230)||(14352759-14352842)
chr1 (308-378)||(31423430-31423501)
chr1 (36-98)||(48665076-48665138)
chr1 (308-387)||(8954303-8954382)
chr1 (313-387)||(28201948-28202023)
chr1 (230-276)||(10115509-10115555)
chr1 (194-246)||(13112047-13112099)
chr1 (236-303)||(11693686-11693753)
chr1 (184-233)||(32260833-32260882)
chr1 (147-230)||(10115572-10115653)
chr1 (36-87)||(6996014-6996065)
chr1 (274-313)||(6997388-6997427)
chr1 (309-387)||(13125992-13126071)
chr1 (313-387)||(14098511-14098586)
chr1 (308-379)||(16430759-16430828)
chr1 (309-387)||(25127521-25127599)
chr1 (309-365)||(155375-155432)
chr1 (20-84)||(39462439-39462502)
chr1 (20-59)||(2617460-2617499)
chr1 (41-88)||(2949550-2949597)
chr1 (235-266)||(16855265-16855296)
chr1 (282-313)||(21964366-21964397)
chr1 (20-62)||(28840619-28840661)
chr1 (263-303)||(10115466-10115506)
chr1 (20-60)||(16226110-16226150)
chr1 (20-60)||(16231544-16231584)
chr1 (20-60)||(47177301-47177341)
chr1 (20-60)||(47179652-47179692)
[»] chr7 (58 HSPs)
chr7 (35-387)||(20299081-20299432)
chr7 (35-387)||(38395911-38396264)
chr7 (39-387)||(28487175-28487523)
chr7 (20-387)||(7092475-7092838)
chr7 (20-344)||(31156207-31156531)
chr7 (35-379)||(7470337-7470687)
chr7 (20-315)||(1849663-1849958)
chr7 (20-313)||(1606171-1606463)
chr7 (35-344)||(7349590-7349898)
chr7 (35-313)||(11756925-11757202)
chr7 (20-314)||(7094722-7095016)
chr7 (35-313)||(18345237-18345515)
chr7 (35-313)||(3035415-3035695)
chr7 (35-315)||(7472295-7472576)
chr7 (35-313)||(28485261-28485540)
chr7 (43-314)||(21470614-21470884)
chr7 (35-313)||(38393683-38393960)
chr7 (37-313)||(20625734-20626010)
chr7 (37-313)||(20629625-20629901)
chr7 (37-313)||(20642044-20642320)
chr7 (36-313)||(21989853-21990128)
chr7 (35-313)||(7351969-7352246)
chr7 (113-313)||(47865328-47865528)
chr7 (36-313)||(37412440-37412716)
chr7 (35-313)||(42331310-42331593)
chr7 (112-305)||(24258166-24258358)
chr7 (36-244)||(13099788-13099996)
chr7 (35-233)||(43253835-43254035)
chr7 (165-314)||(443325-443474)
chr7 (36-313)||(3676997-3677257)
chr7 (35-209)||(20297163-20297336)
chr7 (147-310)||(40281824-40281989)
chr7 (147-303)||(10690684-10690845)
chr7 (308-386)||(24815618-24815696)
chr7 (250-303)||(20297108-20297161)
chr7 (230-296)||(12310542-12310608)
chr7 (259-305)||(43254023-43254069)
chr7 (292-375)||(26214610-26214694)
chr7 (40-98)||(443510-443568)
chr7 (147-233)||(12310442-12310528)
chr7 (20-61)||(40946276-40946317)
chr7 (308-379)||(44726553-44726621)
chr7 (292-335)||(6048410-6048454)
chr7 (235-266)||(6628853-6628884)
chr7 (186-233)||(12484976-12485023)
chr7 (186-233)||(12506407-12506454)
chr7 (235-266)||(12657667-12657698)
chr7 (20-62)||(35580-35622)
chr7 (20-62)||(44515-44557)
chr7 (308-384)||(9680474-9680547)
chr7 (236-266)||(12485044-12485074)
chr7 (236-266)||(12506475-12506505)
chr7 (112-141)||(443461-443490)
chr7 (20-60)||(22108114-22108154)
chr7 (20-60)||(22137125-22137165)
chr7 (20-60)||(25542484-25542524)
chr7 (20-60)||(40549874-40549914)
chr7 (20-60)||(40552152-40552192)
[»] chr5 (46 HSPs)
chr5 (30-387)||(18468624-18468980)
chr5 (35-387)||(27912145-27912498)
chr5 (35-387)||(18509630-18509981)
chr5 (36-371)||(26098563-26098899)
chr5 (20-313)||(3373337-3373630)
chr5 (35-317)||(27910131-27910413)
chr5 (35-313)||(25803707-25803984)
chr5 (35-313)||(15551925-15552203)
chr5 (35-293)||(10586549-10586807)
chr5 (36-313)||(26097421-26097700)
chr5 (35-311)||(18511525-18511800)
chr5 (36-313)||(18596326-18596614)
chr5 (130-313)||(21288529-21288713)
chr5 (35-233)||(18466453-18466648)
chr5 (161-306)||(17415748-17415893)
chr5 (209-313)||(6661929-6662033)
chr5 (115-233)||(15143262-15143373)
chr5 (234-314)||(40221281-40221361)
chr5 (259-314)||(18466410-18466465)
chr5 (230-303)||(5779144-5779217)
chr5 (112-180)||(40221340-40221408)
chr5 (259-313)||(15143220-15143274)
chr5 (329-387)||(41586519-41586577)
chr5 (313-387)||(659637-659712)
chr5 (308-387)||(20044684-20044762)
chr5 (20-61)||(4409999-4410040)
chr5 (20-61)||(10529395-10529436)
chr5 (20-61)||(39854426-39854467)
chr5 (42-98)||(41586024-41586080)
chr5 (313-387)||(20504453-20504528)
chr5 (313-387)||(31466497-31466572)
chr5 (232-266)||(2532750-2532784)
chr5 (20-62)||(25921769-25921811)
chr5 (21-62)||(4236570-4236611)
chr5 (35-76)||(6661493-6661533)
chr5 (24-61)||(6745003-6745040)
chr5 (24-61)||(6747246-6747283)
chr5 (20-60)||(15354778-15354818)
chr5 (20-60)||(15357054-15357094)
chr5 (20-60)||(23665081-23665121)
chr5 (20-60)||(23667356-23667396)
chr5 (20-60)||(23742061-23742101)
chr5 (20-60)||(23793466-23793506)
chr5 (20-60)||(31542678-31542718)
chr5 (20-60)||(31545023-31545063)
chr5 (160-233)||(32520241-32520316)
[»] scaffold0005 (4 HSPs)
scaffold0005 (20-387)||(51635-52001)
scaffold0005 (242-314)||(50158-50230)
scaffold0005 (194-233)||(170076-170115)
scaffold0005 (20-61)||(183935-183976)
[»] chr4 (47 HSPs)
chr4 (36-387)||(5100669-5101018)
chr4 (20-387)||(14787729-14788095)
chr4 (35-387)||(22132710-22133058)
chr4 (35-313)||(22134941-22135219)
chr4 (20-313)||(44600134-44600428)
chr4 (35-313)||(24347959-24348236)
chr4 (20-313)||(17662534-17662826)
chr4 (42-313)||(56030189-56030459)
chr4 (112-297)||(30136331-30136516)
chr4 (163-313)||(47211158-47211308)
chr4 (112-313)||(38890517-38890701)
chr4 (113-313)||(9022060-9022252)
chr4 (112-313)||(10112626-10112815)
chr4 (159-313)||(9863499-9863650)
chr4 (35-185)||(53404998-53405149)
chr4 (212-311)||(19322410-19322510)
chr4 (112-206)||(19322547-19322641)
chr4 (242-314)||(14789500-14789572)
chr4 (147-303)||(38209098-38209259)
chr4 (310-387)||(36380087-36380164)
chr4 (35-137)||(47211057-47211159)
chr4 (147-233)||(54929094-54929180)
chr4 (35-98)||(18709482-18709545)
chr4 (235-297)||(5516771-5516833)
chr4 (289-386)||(16454977-16455074)
chr4 (154-233)||(10979676-10979755)
chr4 (308-387)||(18535332-18535410)
chr4 (313-386)||(24880183-24880257)
chr4 (230-299)||(29609914-29609983)
chr4 (232-303)||(54929198-54929267)
chr4 (314-375)||(3792422-3792484)
chr4 (20-61)||(2485169-2485210)
chr4 (20-61)||(6764835-6764876)
chr4 (320-387)||(3825120-3825188)
chr4 (21-61)||(40637070-40637110)
chr4 (21-61)||(47868397-47868437)
chr4 (194-233)||(14647175-14647214)
chr4 (171-230)||(29609838-29609897)
chr4 (20-62)||(5198415-5198457)
chr4 (313-388)||(36920126-36920197)
chr4 (20-62)||(38409194-38409236)
chr4 (20-61)||(8631719-8631760)
chr4 (20-61)||(14633316-14633357)
chr4 (21-62)||(24888791-24888832)
chr4 (35-84)||(52942758-52942806)
chr4 (184-228)||(5516703-5516747)
chr4 (20-60)||(16934439-16934479)
[»] chr3 (52 HSPs)
chr3 (36-387)||(53915806-53916156)
chr3 (30-387)||(42991879-42992235)
chr3 (35-350)||(457913-458228)
chr3 (35-314)||(746421-746699)
chr3 (35-313)||(455573-455851)
chr3 (35-314)||(10621851-10622128)
chr3 (35-313)||(25533107-25533382)
chr3 (30-311)||(42989954-42990235)
chr3 (36-313)||(51943042-51943318)
chr3 (36-313)||(1313082-1313357)
chr3 (35-313)||(41848804-41849090)
chr3 (35-313)||(4104208-4104483)
chr3 (36-313)||(53917974-53918250)
chr3 (36-313)||(27635937-27636212)
chr3 (239-314)||(6561612-6561687)
chr3 (308-387)||(25635048-25635127)
chr3 (147-303)||(11066255-11066429)
chr3 (230-303)||(53974124-53974197)
chr3 (230-303)||(11072644-11072717)
chr3 (308-387)||(23636654-23636732)
chr3 (158-281)||(54287487-54287627)
chr3 (308-387)||(3306447-3306523)
chr3 (306-387)||(1619197-1619280)
chr3 (163-228)||(53974011-53974077)
chr3 (308-387)||(28100593-28100669)
chr3 (308-387)||(28137826-28137902)
chr3 (273-313)||(27000083-27000123)
chr3 (35-98)||(6561696-6561758)
chr3 (292-355)||(14634682-14634745)
chr3 (292-368)||(4386444-4386522)
chr3 (163-233)||(11072731-11072801)
chr3 (20-61)||(4308575-4308616)
chr3 (313-387)||(18097423-18097493)
chr3 (24-61)||(35918247-35918284)
chr3 (20-61)||(51727300-51727341)
chr3 (21-61)||(25690651-25690691)
chr3 (20-60)||(53896490-53896530)
chr3 (20-62)||(48361964-48362006)
chr3 (22-60)||(50493922-50493960)
chr3 (35-84)||(1618967-1619016)
chr3 (21-62)||(26720469-26720510)
chr3 (24-61)||(27101483-27101520)
chr3 (24-61)||(27101558-27101595)
chr3 (313-387)||(43227961-43228031)
chr3 (20-60)||(6063742-6063782)
chr3 (20-60)||(6066091-6066131)
chr3 (20-60)||(6719405-6719445)
chr3 (20-60)||(11170327-11170367)
chr3 (20-84)||(24979607-24979670)
chr3 (21-61)||(43226008-43226048)
chr3 (21-61)||(43228213-43228253)
chr3 (22-62)||(45882860-45882900)
[»] chr2 (29 HSPs)
chr2 (35-350)||(35215907-35216221)
chr2 (21-313)||(42452449-42452741)
chr2 (35-313)||(35218288-35218565)
chr2 (35-313)||(23452552-23452829)
chr2 (112-313)||(42923893-42924094)
chr2 (112-314)||(27583713-27583908)
chr2 (112-355)||(28568556-28568792)
chr2 (184-313)||(27136368-27136505)
chr2 (218-306)||(34575608-34575696)
chr2 (147-303)||(15693583-15693755)
chr2 (238-303)||(28568346-28568411)
chr2 (230-336)||(41303549-41303655)
chr2 (162-233)||(39286971-39287042)
chr2 (112-208)||(34575528-34575617)
chr2 (154-233)||(41304806-41304884)
chr2 (147-232)||(7502638-7502723)
chr2 (313-387)||(6259355-6259430)
chr2 (313-387)||(13828838-13828913)
chr2 (235-299)||(39286892-39286952)
chr2 (155-233)||(41303457-41303535)
chr2 (20-61)||(5377729-5377770)
chr2 (23-80)||(42923810-42923867)
chr2 (249-300)||(7502582-7502633)
chr2 (308-386)||(31733279-31733356)
chr2 (230-303)||(41304898-41304964)
chr2 (315-387)||(21518946-21519019)
chr2 (21-62)||(42064432-42064473)
chr2 (20-61)||(45280281-45280322)
chr2 (20-60)||(24162508-24162548)
[»] chr6 (32 HSPs)
chr6 (20-313)||(26932866-26933158)
chr6 (20-313)||(12195811-12196104)
chr6 (20-313)||(18317751-18318044)
chr6 (30-313)||(2629196-2629479)
chr6 (35-313)||(30966923-30967201)
chr6 (35-313)||(30034918-30035196)
chr6 (112-313)||(5275727-5275928)
chr6 (20-313)||(19704871-19705165)
chr6 (40-305)||(17852275-17852540)
chr6 (116-311)||(17011781-17011973)
chr6 (112-313)||(22858343-22858536)
chr6 (147-311)||(20526548-20526708)
chr6 (147-378)||(30445154-30445404)
chr6 (230-303)||(30443022-30443097)
chr6 (308-376)||(28038251-28038320)
chr6 (313-387)||(30729347-30729422)
chr6 (20-61)||(1230545-1230586)
chr6 (292-375)||(11138096-11138181)
chr6 (147-233)||(30443111-30443195)
chr6 (308-387)||(3396024-3396100)
chr6 (21-61)||(28241618-28241658)
chr6 (256-299)||(12158532-12158575)
chr6 (313-387)||(15533221-15533296)
chr6 (308-387)||(26944853-26944931)
chr6 (313-370)||(17759257-17759315)
chr6 (35-84)||(15532992-15533040)
chr6 (35-80)||(17012003-17012047)
chr6 (307-375)||(24435383-24435452)
chr6 (235-279)||(3833176-3833220)
chr6 (314-354)||(24543186-24543226)
chr6 (20-60)||(26066324-26066364)
chr6 (20-60)||(26068595-26068635)
[»] chr8 (28 HSPs)
chr8 (36-387)||(41384418-41384768)
chr8 (35-313)||(15808962-15809239)
chr8 (20-313)||(43529871-43530163)
chr8 (35-313)||(28283536-28283813)
chr8 (35-313)||(3873750-3874030)
chr8 (20-313)||(608470-608765)
chr8 (36-312)||(41382420-41382696)
chr8 (155-313)||(32339094-32339252)
chr8 (196-314)||(3265635-3265753)
chr8 (35-162)||(181434-181561)
chr8 (315-387)||(21482049-21482121)
chr8 (35-98)||(32339266-32339329)
chr8 (232-303)||(13986304-13986374)
chr8 (35-98)||(24873498-24873561)
chr8 (232-303)||(30679186-30679256)
chr8 (147-233)||(11701364-11701447)
chr8 (314-375)||(15949111-15949173)
chr8 (308-379)||(31574244-31574316)
chr8 (314-375)||(26268786-26268848)
chr8 (20-61)||(22684962-22685003)
chr8 (23-84)||(31162188-31162249)
chr8 (159-230)||(13986214-13986285)
chr8 (313-356)||(17849502-17849545)
chr8 (20-62)||(14807748-14807790)
chr8 (313-367)||(15072451-15072505)
chr8 (20-62)||(28251863-28251905)
chr8 (232-261)||(27820149-27820178)
chr8 (259-303)||(11701435-11701479)
[»] scaffold0511 (1 HSPs)
scaffold0511 (20-313)||(1735-2028)
[»] scaffold0154 (1 HSPs)
scaffold0154 (36-313)||(11785-12061)
[»] scaffold0031 (1 HSPs)
scaffold0031 (36-313)||(78883-79161)
[»] scaffold1674 (1 HSPs)
scaffold1674 (219-350)||(1-132)
[»] scaffold0133 (2 HSPs)
scaffold0133 (165-387)||(4480-4694)
scaffold0133 (35-98)||(4729-4791)
[»] scaffold0468 (2 HSPs)
scaffold0468 (198-312)||(2070-2184)
scaffold0468 (112-170)||(2022-2080)
[»] scaffold0008 (2 HSPs)
scaffold0008 (160-230)||(57836-57905)
scaffold0008 (232-303)||(57926-57995)
[»] scaffold0552 (1 HSPs)
scaffold0552 (20-61)||(1127-1168)
[»] scaffold0533 (2 HSPs)
scaffold0533 (235-276)||(2232-2273)
scaffold0533 (162-209)||(1971-2018)
[»] scaffold0038 (1 HSPs)
scaffold0038 (21-61)||(41780-41820)
[»] scaffold0474 (1 HSPs)
scaffold0474 (253-303)||(10443-10493)
[»] scaffold0131 (1 HSPs)
scaffold0131 (20-62)||(14969-15011)
[»] scaffold0472 (1 HSPs)
scaffold0472 (20-60)||(6151-6191)


Alignment Details
Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 35 - 387
Target Start/End: Original strand, 31735838 - 31736189
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  31735838 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 31735936  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31735937 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 31736036  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31736037 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccttccatcaaattttgagtcatactacaacattctccaccttgactctaaat 31736136  T
Q  335 tagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  31736137 tagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 31736189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 35 - 379
Target Start/End: Original strand, 27337255 - 27337597
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| ||           ||||||||| ||||||||||||    
T  27337255 acaaggtctatatttatagtaaaagtataacgcataaatttggaacaaataccacatcgaagatacgtttttttttt-tccttcagttaaagaatatttg 27337353  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27337354 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 27337453  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27337454 aaaatatatttgaaacaaatcttatatatttttagcaacaatattccccatccatcaaatttggagtcatactacaacattctccaccttgactctaaat 27337553  T
Q  335 tagcgatgataccaatttaacatcaaccaccatgctgctctttcc 379  Q
    ||| |||||| |||||||||||| |||||||||||||||||||||    
T  27337554 tagtgatgatgccaatttaacat-aaccaccatgctgctctttcc 27337597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 35 - 314
Target Start/End: Complemental strand, 47906232 - 47905955
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |           |||||||| ||||||||||||||    
T  47906232 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatac--tttttttttctccttcaatgaaagaatatttg 47906135  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47906134 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 47906035  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47906034 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 47905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 24325639 - 24325347
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |           ||||||||    
T  24325639 aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactaaagatac-atttttttttctccttca 24325541  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24325540 gtgaaagaatatttgcatcaaaaatataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 24325441  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24325440 atatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 24325347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 35 - 319
Target Start/End: Original strand, 9463563 - 9463846
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||| ||          |||||||| ||||||||||||||    
T  9463563 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaagatacgttttttttt-ctccttcaatgaaagaatatttg 9463661  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  9463662 catcaaaaatataatattccctttcaaaatatatttgcattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcac 9463761  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctcc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9463762 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacatcctcc 9463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 15295146 - 15295444
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| ||  |||||| |||||||| ||||| |||||||||| |||||| |           ||||||||    
T  15295146 aaagtttgctctgatacaaggtctatatttatagtaaacatataactcataaattaggaacgaataccacactgaagatacattttttttttctccttca 15295245  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15295246 gtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 15295345  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  15295346 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaacaatctc 15295444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 9459736 - 9460013
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||| ||          |||||||| ||||||||||||||    
T  9459736 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaagatacgttttttttt-ctccttcaatgaaagaatatttg 9459834  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | || ||||||||||||||||||||||||||||||||||||||    
T  9459835 catcaaaaatataatattccctttcaaaatatatttgcattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcac 9459934  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9459935 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 9460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 27339447 - 27339730
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnct-ccttcagtgaaagaatattt 133  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||           | ||||||||||||||||||||    
T  27339447 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttcttttttttttccttcagtgaaagaatattt 27339546  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa----atatattttc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    ||||||||||    
T  27339547 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttc 27339646  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  27339647 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccgtcaaatttggagtcatactacaaca 27339730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 39932039 - 39931762
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| ||  |||||| |||||||||||||| ||||| |||| |||||| ||          |||||||| | ||||||||||||    
T  39932039 acaaggtctatatttatagtaaacatataactcataaatttggaacgaatactacactgaagatacgttttttttt-ctccttcaataaaagaatatttg 39931941  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39931940 catcaaaagtataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 39931841  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931840 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 39931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 313
Target Start/End: Original strand, 17324950 - 17325227
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||| ||| | |||||| ||          ||||||||||||||||||||||||    
T  17324950 caaggtctatatttatagtaaaagtataactcataaatttggaacgaatatcaccctgaagatacgttttttttttctccttcagtgaaagaatatttgc 17325049  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| | ||    
T  17325050 ataaaaaatataatattcccttgcaaaatatatttgcatcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactca 17325149  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17325150 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 17325227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 125 - 387
Target Start/End: Complemental strand, 6997395 - 6997140
Alignment:
Q  125 agaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatata 224  Q
    ||||||||||||||||||||||||||||| |||||||      ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  225 ttttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccacctt 324  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactataacattctccacctt 6997203  T
Q  325 gactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||||||| | |||||||    
T  6997202 gactctaaattagtgatgatgccaatttaacatcaaccaccgtgctgctctttaccttgcttc 6997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 40 - 313
Target Start/End: Original strand, 28998571 - 28998844
Alignment:
Q  40 gtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgcatca 139  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||  || || ||          ||||||||||||||||||||||||||||    
T  28998571 gtctatatttatagtaaaagtataactcataaatttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatca 28998670  T
Q  140 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| || | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  28998671 aaaatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaat 28998770  T
Q  240 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28998771 atattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 28998844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 40 - 313
Target Start/End: Original strand, 29004287 - 29004560
Alignment:
Q  40 gtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgcatca 139  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||  || || ||          ||||||||||||||||||||||||||||    
T  29004287 gtctatatttatagtaaaagtataactcataaatttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatca 29004386  T
Q  140 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaat 239  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| || | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  29004387 aaaatataatattccctttcaaaatatatttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaat 29004486  T
Q  240 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29004487 atattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 29004560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 115 - 313
Target Start/End: Complemental strand, 48665050 - 48664852
Alignment:
Q  115 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtc 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  48665050 cttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtc 48664951  T
Q  215 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48664950 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 48664852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 20 - 286
Target Start/End: Original strand, 21948489 - 21948756
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnc-tccttc 118  Q
    |||||||  ||||| |||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||| |||||| ||          | ||||||    
T  21948489 aaagtttagtatgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacgttttttttttcctccttc 21948588  T
Q  119 agtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccata 218  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21948589 tgtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccata 21948688  T
Q  219 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21948689 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 21948756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 115 - 313
Target Start/End: Original strand, 2949617 - 2949815
Alignment:
Q  115 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtc 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  2949617 cttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacaatacaaaaatatatttattgtc 2949716  T
Q  215 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  2949717 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaaattttgagtcatactataaca 2949815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 121 - 313
Target Start/End: Original strand, 4131690 - 4131882
Alignment:
Q  121 tgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt-gtccataa 219  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 4131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 128 - 314
Target Start/End: Original strand, 6115532 - 6115719
Alignment:
Q  128 atatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattt 227  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  228 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa-ttttgagtcatactacaacat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttttgagtcatcctacaacat 6115719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 123 - 313
Target Start/End: Original strand, 45693834 - 45694024
Alignment:
Q  123 aaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaata 222  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  223 tattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatagtacaaca 45694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 46432521 - 46432636
Alignment:
Q  198 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  298 gagtcatactacaaca 313  Q
    ||||||||||||||||    
T  46432621 gagtcatactacaaca 46432636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 115 - 275
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  115 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtc 214  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||      ||| ||||||||||||||||||| | ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  215 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaa 275  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 35 - 201
Target Start/End: Original strand, 46432041 - 46432207
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||| ||          |||||||||||||||||||||||    
T  46432041 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaagatacgttttttttttctccttcagtgaaagaatatttg 46432140  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaa 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46432141 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 160 - 313
Target Start/End: Complemental strand, 16561284 - 16561131
Alignment:
Q  160 aaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttt 259  Q
    ||||||||||||  ||||||  | ||||||| | |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16561284 aaaatatatttgtttcaaatattccttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatatttt 16561185  T
Q  260 atatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||| ||||||    
T  16561184 atatttttagcaacaatattcttcatccaacaaattttgaatcatacaacaaca 16561131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 35 - 190
Target Start/End: Original strand, 2510641 - 2510800
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn----ctccttcagtgaaagaata 130  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| || ||              |||||||||||||||||||    
T  2510641 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaata 2510740  T
Q  131 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 190  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2510741 tttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcata 2510800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 147 - 303
Target Start/End: Original strand, 13785662 - 13785835
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca------------- 233  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||||||| | || ||||||||||||||||||                 
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctaga 13785761  T
Q  234 ----caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
        ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  13785762 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||||||||| ||||||||||||||||||||| | ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 387
Target Start/End: Original strand, 8347833 - 8347905
Alignment:
Q  315 tctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  8347833 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 8347905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 26520516 - 26520580
Alignment:
Q  115 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 179  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26520516 cttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 32260817 - 32260746
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  32260817 cacaaaatatattttaaacaattcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 50077188 - 50077259
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcc 379  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  50077188 acaacaatctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccttgctgctctttcc 50077259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 14352842 - 14352759
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttca 230  Q
    |||||||||||| ||||||||||||||||||||| | ||||||| | |||||||||||||||| | | ||||||||||||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatattttca 14352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 31423430 - 31423501
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaa-tttaacatcaaccaccatgctgctctttc 378  Q
    |||||| ||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  31423430 acaacaatcttcaccttgactctaaattagtgatgatgccaaatttaacatcaaccaccatgctgctctttc 31423501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 48665138 - 48665076
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||||    
T  48665138 caaggtctatatttatagtaaaagtataactcataaatttggaacaaatactacactgaagat 48665076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 8954382 - 8954303
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| | |||||||||||||| |||||| |||||   ||||||||||||||||||| ||||||||||||| |||||||    
T  8954382 acaacaatttccaccttgactcttaattagtgatgaagtcaatttaacatcaaccaccttgctgctctttcccttgcttc 8954303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 28201948 - 28202023
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    |||||||||||||| | ||||| ||||||||| ||||||||||||||||||||| ||| ||||||||| |||||||    
T  28201948 attctccaccttgattttaaatcagcgatgatgccaatttaacatcaaccaccattgcagctctttcccttgcttc 28202023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 10115555 - 10115509
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaat 276  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  10115555 agcacaaaatatatttgaaacaaatcttttatatttttaacaacaat 10115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 13112047 - 13112099
Alignment:
Q  194 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 246  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaatacatttg 13112099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 11693686 - 11693753
Alignment:
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||| |||||||  ||||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  11693686 aaatatatttaaaacaaaatttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 32260882 - 32260833
Alignment:
Q  184 cttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  32260882 cttcatacggtacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 10115653 - 10115572
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttca 230  Q
    |||||||| ||| ||||||||||||||||||||  | ||||||| |  | ||||  ||||||||||||||||||||||||||||    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaa--atatttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 6996014 - 6996065
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaatacc 87  Q
    ||||||||||||||||| | |||||||||| |||||||||||||| ||||||    
T  6996014 caaggtctatatttataataaaagtataactcataaatttggaacgaatacc 6996065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 6997388 - 6997427
Alignment:
Q  274 aatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6997388 aatattctccatccatcatattttgagtcatactacaaca 6997427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 13125992 - 13126071
Alignment:
Q  309 caacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||| ||||||||||||| ||||||||| |||||| ||||||||| |||||| |||| ||  ||||||||| |||||||    
T  13125992 caacaatctccaccttgacactaaattagtgatgatgccaatttaaccatcaatcaccttgacgctctttcccttgcttc 13126071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 14098511 - 14098586
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||||||||||||||||  |||| || |||||| ||||||||||||||||| ||| ||||||||||||  |||||||    
T  14098511 attctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccgccattgctgctctttcacttgcttc 14098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 16430828 - 16430759
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcc 379  Q
    |||||| ||||||| |||||||||| |||| |||||| ||||||||||||||| |||| |||||||||||||    
T  16430828 acaacaatctccactttgactctaa-ttagtgatgatgccaatttaacatcaa-caccttgctgctctttcc 16430759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 387
Target Start/End: Complemental strand, 25127599 - 25127521
Alignment:
Q  309 caacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||| |||||||||||||||||||||||  |||||  |||||||||||||| | || ||||| | ||||| |||||||    
T  25127599 caacaatctccaccttgactctaaattagttatgatgtcaatttaacatcaatcgccttgctgttttttcccttgcttc 25127521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 155432 - 155375
Alignment:
Q  309 caacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccacc 365  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||| |||||||||||    
T  155432 caacaatctccaccttgactctaaataagtgatgatgccaatttaaccatcaaccacc 155375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 39462502 - 39462439
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaat 84  Q
    ||||||| || ||| |||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  39462502 aaagtttactctgatacaaggtctatatttatagtgaaagtattactta-aaatttggaacaaat 39462439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 2617499 - 2617460
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaag 59  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  2617499 aaagtttgctctgatacaaggtctatatttatagtgaaag 2617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 2949550 - 2949597
Alignment:
Q  41 tctatatttatagtgaaagtataacccataaatttggaacaaatacca 88  Q
    ||||||||||| || |||||||||| |||||||||||||| |||||||    
T  2949550 tctatatttattgtaaaagtataactcataaatttggaacgaatacca 2949597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 266
Target Start/End: Original strand, 16855265 - 16855296
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttt 266  Q
    ||||||||||||||||||||||||||||||||    
T  16855265 aaaatatatttgaaacaaatcttttatatttt 16855296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 313
Target Start/End: Original strand, 21964366 - 21964397
Alignment:
Q  282 ccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||    
T  21964366 ccatccatcaaattttgagtcatactacaaca 21964397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 28840661 - 28840619
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  28840661 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 28840619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 10115506 - 10115466
Alignment:
Q  263 tttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||| |||||||||||||  ||||||||||||||||||||    
T  10115506 ttttttgcaacaatattcttaatccatcaaattttgagtca 10115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16226150 - 16226110
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  16226150 aaagtttgctttgatacaaggtctatatttatagtaaaagt 16226110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16231584 - 16231544
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  16231584 aaagtttgctttgatacaaggtctatatttatagtaaaagt 16231544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 47177341 - 47177301
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  47177341 aaagtttgctttgatacaaggtctatatttatagtaaaagt 47177301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 47179692 - 47179652
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  47179692 aaagtttgctttgatacaaggtctatatttatagtaaaagt 47179652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 35 - 387
Target Start/End: Complemental strand, 20299432 - 20299081
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  20299432 acaaggtctatatttatagtaaaagtataactcataaatatggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 20299334  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20299333 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 20299234  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20299233 aaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 20299134  T
Q  335 tagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  20299133 tagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 20299081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 35 - 387
Target Start/End: Complemental strand, 38396264 - 38395911
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||    
T  38396264 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttttttttttctccttcagtgaaagaatatttg 38396165  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  38396164 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtacataaatatattttcagcac 38396065  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38396064 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaacattctccaccttgactctaaat 38395965  T
Q  335 tagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||| |||||| | ||||||||||||||||||| ||||||||||||| |||||||    
T  38395964 tagtgatgatgctaatttaacatcaaccaccattgctgctctttcccttgcttc 38395911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 39 - 387
Target Start/End: Complemental strand, 28487523 - 28487175
Alignment:
Q  39 ggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgcatc 138  Q
    |||||||||||||||  |||||||||| ||||||||| ||||||||||||||| |||||| ||          |||||||||||||||||||||||||||    
T  28487523 ggtctatatttataggaaaagtataactcataaatttagaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatc 28487424  T
Q  139 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaa 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  28487423 aaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaa 28487324  T
Q  239 tatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagc 338  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28487323 tatatttgaagcaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagt 28487224  T
Q  339 gatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| |||||||||||||  ||||||||||||||||||| |||||||    
T  28487223 gatgatgccaatttaacatcgtccaccatgctgctctttcccttgcttc 28487175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 20 - 387
Target Start/End: Original strand, 7092475 - 7092838
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||| |||||| |           ||||||||    
T  7092475 aaagtttgctctgatacaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacaattttttttcctccttca 7092574  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7092575 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 7092674  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctcc 319  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7092675 atatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctcc 7092774  T
Q  320 accttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||||||||||||||| |||||| |||||    |||||||| || || |||||||||| |||||||    
T  7092775 accttgactctaaattagtgatgatgccaat----catcaacctccttgttgctctttcccttgcttc 7092838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 20 - 344
Target Start/End: Original strand, 31156207 - 31156531
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||  ||| ||||| |||||||||||||| |||||||| | ||||||||||||||||||||||||| |||||||||          ||||||||    
T  31156207 aaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaatttggaacaaataccacactgaagattcgttttttttttctccttca 31156306  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31156307 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 31156406  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctcc 319  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31156407 atatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaacattctcc 31156506  T
Q  320 accttgactctaaattagcgatgat 344  Q
    |||||||||||||||||| ||||||    
T  31156507 accttgactctaaattagtgatgat 31156531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 35 - 379
Target Start/End: Original strand, 7470337 - 7470687
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn------ctccttcagtgaaagaa 128  Q
    |||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||| |||||| ||                |||||||| ||||||||    
T  7470337 acaaggtctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaa 7470436  T
Q  129 tatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatatttt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7470437 tatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttt 7470536  T
Q  229 cagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgact 328  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7470537 cagcacaaaatatatttgaaacaaatgttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgact 7470636  T
Q  329 ctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcc 379  Q
    ||||||| | |||||| ||||||||||||||||||||||| ||||||||||    
T  7470637 ctaaatttgtgatgatgccaatttaacatcaaccaccatgatgctctttcc 7470687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 1849958 - 1849663
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||||    
T  1849958 aaagtttgctatgaaacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttttctccttca 1849859  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  1849858 gtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataa 1849759  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacatt 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  1849758 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaacatt 1849663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 1606463 - 1606171
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||||    
T  1606463 aaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttt-ctccttca 1606365  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1606364 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 1606265  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  1606264 atatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 1606171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 35 - 344
Target Start/End: Original strand, 7349590 - 7349898
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| ||          ||| |||||||||||||||||||    
T  7349590 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaagatacgttttttttt-ctcattcagtgaaagaatatttg 7349688  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  7349689 cctcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcac 7349788  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7349789 aatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaacattctccaccttgactctaaat 7349888  T
Q  335 tagcgatgat 344  Q
    ||| ||||||    
T  7349889 tagtgatgat 7349898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 11757202 - 11756925
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  11757202 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 11757104  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11757103 catcaaaaatataatattccctttcaaaatatatttgcatcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 11757004  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11757003 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 11756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 20 - 314
Target Start/End: Original strand, 7094722 - 7095016
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||| | ||  |||||| |||||||||||||| |||||||||| |||||| ||          ||||||||    
T  7094722 aaagtttgctctgatacaaggtctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttcctccttca 7094821  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7094822 gtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 7094921  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7094922 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 7095016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 18345515 - 18345237
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  18345515 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttg 18345416  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||    
T  18345415 catcaaaaatataatattccatttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcac 18345316  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18345315 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 18345237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 3035695 - 3035415
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn--ctccttcagtgaaagaatatt 132  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||| ||            |||||||||||||||||||||    
T  3035695 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatt 3035596  T
Q  133 tgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagc 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3035595 tgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagc 3035496  T
Q  233 acaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3035495 acaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 3035415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 35 - 315
Target Start/End: Original strand, 7472295 - 7472576
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn-ctccttcagtgaaagaatattt 133  Q
    |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||| |||||| ||           |||||||| |||||||||||||    
T  7472295 acaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgtttttttttttctccttcaatgaaagaatattt 7472394  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7472395 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagca 7472494  T
Q  234 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacatt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7472495 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacatt 7472576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 28485540 - 28485261
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnc-tccttcagtgaaagaatattt 133  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          | |||||| ||||||||||||||    
T  28485540 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtgttttttttcctccttcggtgaaagaatattt 28485441  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28485440 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagca 28485341  T
Q  234 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  28485340 caaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaaattttgaatcatactacaaca 28485261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 43 - 314
Target Start/End: Original strand, 21470614 - 21470884
Alignment:
Q  43 tatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaaa 142  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||||||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaa 21470712  T
Q  143 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatata 242  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21470713 atataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatata 21470812  T
Q  243 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  21470813 tttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaactacaacat 21470884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 38393960 - 38393683
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          | |||||||||||||||||||||    
T  38393960 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttatttttt-caccttcagtgaaagaatatttg 38393862  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  38393861 catcaaaaatataacattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcac 38393762  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  38393761 aaaatatatttgaaacaaatcttatatatttttagcaacaatattctccatccatcaaatttagaatcatactacaaca 38393683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 37 - 313
Target Start/End: Complemental strand, 20626010 - 20625734
Alignment:
Q  37 aaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgca 136  Q
    |||||||||||||||| | ||  |||||| |||||||||||||| |||||||||| |||||| ||          |||||||||||||| ||||||||||    
T  20626010 aaggtctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgca 20625911  T
Q  137 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaa 236  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20625910 tcaaaaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaa 20625811  T
Q  237 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20625810 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactagaaca 20625734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 37 - 313
Target Start/End: Complemental strand, 20629901 - 20629625
Alignment:
Q  37 aaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgca 136  Q
    |||||||||||||||| | ||  |||||| |||||||||||||| |||||||||| |||||| ||          |||||||||||||| ||||||||||    
T  20629901 aaggtctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgca 20629802  T
Q  137 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaa 236  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20629801 tcaaaaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaa 20629702  T
Q  237 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20629701 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactagaaca 20629625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 37 - 313
Target Start/End: Complemental strand, 20642320 - 20642044
Alignment:
Q  37 aaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgca 136  Q
    |||||||||||||||| | ||  |||||| |||||||||||||| |||||||||| |||||| ||          |||||||||||||| ||||||||||    
T  20642320 aaggtctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgca 20642221  T
Q  137 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaa 236  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20642220 tcaaaaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaa 20642121  T
Q  237 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20642120 aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactagaaca 20642044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 21990128 - 21989853
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||| |||||| ||          ||||||||||||||||||||||||    
T  21990128 caaggtctatatttatagtaaaattataactcataaatttggaacgaataccacacagaagatacgtttttttttcctccttcagtgaaagaatatttgc 21990029  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  |||    
T  21990028 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--aca 21989931  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21989930 caatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgggtcatactacaaca 21989853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 7351969 - 7352246
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| ||          ||| |||||||||||||||||||    
T  7351969 acaaggtttatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaagatacgttttttttt-ctcattcagtgaaagaatatttg 7352067  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  7352068 cctcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcac 7352167  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7352168 aatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 7352246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 47865528 - 47865328
Alignment:
Q  113 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  213 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaac 47865329  T
Q  313 a 313  Q
    |    
T  47865328 a 47865328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 36 - 313
Target Start/End: Original strand, 37412440 - 37412716
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||| |||| ||||| |||||| ||          ||||||||||| ||||||||||||    
T  37412440 caaggtctatatttatagtaaaaatataactcataaatttggaacgaataacacactgaagatacgttttttttt-ctccttcagtggaagaatatttgc 37412538  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||| || ||||||||||||||||||||||||||||||||||    
T  37412539 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcaca 37412638  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37412639 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 37412716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 42331310 - 42331593
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn-----ctccttcagtgaaagaat 129  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||||  ||||| ||               |||||||| |||||||||    
T  42331310 acaaagtctatatttatagtaaaagtataactcataaatttggaacgaataccacactaaagatacgtttttttttttctttctccttcaatgaaagaat 42331409  T
Q  130 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  42331410 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttc 42331509  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  42331510 agcacaaaatatatttaaaacaaatcttttatatttttagcaacaatattcttcattcatcaaattttaagtcatactacaaca 42331593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 112 - 305
Target Start/End: Complemental strand, 24258358 - 24258166
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||   ||||||||||||||||||    
T  24258358 ctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcatcaa-tcgtccttcatactgtacaaaaatatatttatt 24258260  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcata 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  24258259 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 13099788 - 13099996
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          ||||||||||||||||||||||||    
T  13099788 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgc 13099887  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  13099888 atcaaaaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcaca 13099987  T
Q  236 aaatatatt 244  Q
    |||||||||    
T  13099988 aaatatatt 13099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 43253835 - 43254035
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn--ctccttcagtgaaagaatatt 132  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |             |||||||||||||||||||||    
T  43253835 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatactttcttattttttctccttcagtgaaagaatatt 43253934  T
Q  133 tgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagc 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  43253935 tgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagc 43254034  T
Q  233 a 233  Q
    |    
T  43254035 a 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 165 - 314
Target Start/End: Complemental strand, 443474 - 443325
Alignment:
Q  165 atatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 264  Q
    ||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  265 tttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatactacaacat 443325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 3677257 - 3676997
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctc--cttcagtgaaagaatattt 133  Q
    |||| |||||||||||||| |||  ||||| |||||||||||||| |||| ||||| |||||| ||          |||  |||||||||||||||||||    
T  3677257 caagatctatatttatagtaaaaacataactcataaatttggaacgaatatcacactgaagatacgttttttttttctctccttcagtgaaagaatattt 3677158  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||                   |||||||||    
T  3677157 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatata-------------------ttttcagca 3677077  T
Q  234 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3677076 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatctatcaaattttgagtcatactacaaca 3676997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 35 - 209
Target Start/End: Complemental strand, 20297336 - 20297163
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||| |||||| ||          ||||||| |||||||||||||||    
T  20297336 acaaggtccatatttttagtaaaagtataactcgtaaatttggaacaaataccacactgaagatacgttttttttt-ctccttcggtgaaagaatatttg 20297238  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatattta 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20297237 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 147 - 310
Target Start/End: Original strand, 40281824 - 40281989
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 246  Q
    |||||||| ||| |||||||||  | |||||||  |  |||||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  40281824 aatattccttttaaaaatatatccgtatcaaatattctttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttg 40281923  T
Q  247 aaacaaatcttttatatttttagcaacaa--tattctccatccatcaaattttgagtcatactaca 310  Q
    |||||||| ||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||    
T  40281924 aaacaaatattttatatttttagcaacaaattcttcttcatccatcaaattttgagtcatactaca 40281989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 147 - 303
Target Start/End: Complemental strand, 10690845 - 10690684
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttct-tcatatgatacaaaaatatatttattgtccataa------atatattttcagcacaaaat 239  Q
    |||||||| ||| ||||||||||||||||||||  |||| ||| ||| |||||||||||||||||||| |||||      || | ||   ||||||||||    
T  10690845 aatattccttttaaaaatatatttgcatcaaata-ttctgtcacatggtacaaaaatatatttattgtacataagcaacaattttttgaaagcacaaaat 10690747  T
Q  240 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  10690746 atatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 24815618 - 24815696
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgctt 386  Q
    |||||| ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||| ||||||    
T  24815618 acaacaatctccaccttgactctaaattagtgatgatgtcaatttaacatcaaccaccatgctgatctttcccttgctt 24815696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 20297161 - 20297108
Alignment:
Q  250 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 12310542 - 12310608
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattt 296  Q
    ||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||| ||||||    
T  12310542 agcacaaaatatatttgaaacaaatcttttatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  259 tatatttttagcaacaatattctccatccatcaaattttgagtcata 305  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 26214694 - 26214610
Alignment:
Q  292 aattttgagtcatactacaacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctct 375  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    ||||| ||||||||| |||||| |||  |||||||||    
T  26214694 aattttgggtcatactacaacattctccaccttgactctaaattgataatgatgccaatttaaccatcaatcactttgctgctct 26214610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 443568 - 443510
Alignment:
Q  40 gtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||| |||||| ||||||    
T  443568 gtctatatttatagtaaaagtataactcataaatttggaacgaattccacactgaagat 443510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||||| ||| ||||||||||| ||||||||| | ||||||| | |||||||||||||| | ||||| ||| |||| ||||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 40946317 - 40946276
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  40946317 aaagtttgctatgaaacaaggtttatatttatagtgaaagta 40946276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 44726621 - 44726553
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcc 379  Q
    |||||| ||||||||||||||||||||||| |||||| ||||   | ||||||| ||| |||||||||||||    
T  44726621 acaacaatctccaccttgactctaaattagtgatgatgccaa---accatcaactaccttgctgctctttcc 44726553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 6048454 - 6048410
Alignment:
Q  292 aattttgagtca-tactacaacattctccaccttgactctaaatt 335  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||    
T  6048454 aattttgagtcactactacaacgttctccaccttgactctaaatt 6048410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 266
Target Start/End: Complemental strand, 6628884 - 6628853
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttt 266  Q
    ||||||||||||||||||||||||||||||||    
T  6628884 aaaatatatttgaaacaaatcttttatatttt 6628853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  186 tcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||| |||||||||||||||||  | |||||||||||||||||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  186 tcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||| |||||||||||||||||  | |||||||||||||||||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 266
Target Start/End: Original strand, 12657667 - 12657698
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttt 266  Q
    ||||||||||||||||||||||||||||||||    
T  12657667 aaaatatatttgaaacaaatcttttatatttt 12657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 35622 - 35580
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  35622 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 35580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 44557 - 44515
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  44557 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 44515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 9680547 - 9680474
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgc 384  Q
    |||||| ||||||||||||||||||||||| ||||||  |||   | |||||||| || ||||||||||||| ||||    
T  9680547 acaacaatctccaccttgactctaaattagtgatgatgtcaa---accatcaacctccttgctgctctttcccttgc 9680474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 266
Target Start/End: Original strand, 12485044 - 12485074
Alignment:
Q  236 aaatatatttgaaacaaatcttttatatttt 266  Q
    |||||||||||||||||||||||||||||||    
T  12485044 aaatatatttgaaacaaatcttttatatttt 12485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 266
Target Start/End: Original strand, 12506475 - 12506505
Alignment:
Q  236 aaatatatttgaaacaaatcttttatatttt 266  Q
    |||||||||||||||||||||||||||||||    
T  12506475 aaatatatttgaaacaaatcttttatatttt 12506505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 443490 - 443461
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaa 141  Q
    ||||||||||||||||||||||||||||||    
T  443490 ctccttcagtgaaagaatatttgcatcaaa 443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22108154 - 22108114
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  22108154 aaagtttgctttgatacaaggtctatatttatagtaaaagt 22108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22137165 - 22137125
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  22137165 aaagtttgctttgatacaaggtctatatttatagtaaaagt 22137125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 25542524 - 25542484
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  25542524 aaagtttgctctgatacaaggtctatatttatagtaaaagt 25542484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 40549914 - 40549874
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  40549914 aaagtttgctttgatacaaggtctatatttatagtaaaagt 40549874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 40552192 - 40552152
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  40552192 aaagtttgctttgatacaaggtctatatttatagtaaaagt 40552152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 18468980 - 18468624
Alignment:
Q  30 atgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaat 129  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |           ||||||||||||||||||    
T  18468980 atgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatac-tttttattttctccttcagtgaaagaat 18468882  T
Q  130 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18468881 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttc 18468782  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactc 329  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468781 agcacaaaatatatttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactc 18468682  T
Q  330 taaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  18468681 taaattagtgatgatgccaatttaacatcaaccaccatactgctctttcccttgcttc 18468624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 35 - 387
Target Start/End: Complemental strand, 27912498 - 27912145
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn-ctccttcagtgaaagaatattt 133  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| ||           ||||||||||||||||||||||    
T  27912498 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaagatacgtttttttttttctccttcagtgaaagaatattt 27912399  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27912398 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagca 27912299  T
Q  234 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27912298 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaa 27912199  T
Q  334 ttagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||| ||||||  |||||||||||||||  | |||||||||||||| |||||||    
T  27912198 ttagtgatgatgtcaatttaacatcaacacctatgctgctctttcccttgcttc 27912145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 35 - 387
Target Start/End: Original strand, 18509630 - 18509981
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| ||  |||||| ||||||||||| |  |||||||||| |||||| ||          |||||||||||||||||||||||    
T  18509630 acaaggtctatatttatagtaaacatataactcataaatttgggatgaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 18509728  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  18509729 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcac 18509828  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18509829 aaaatatattcgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaccattctccaccttgactttaaat 18509928  T
Q  335 tagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  18509929 tagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 18509981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 36 - 371
Target Start/End: Original strand, 26098563 - 26098899
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn-ctccttcagtgaaagaatatttg 134  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||| |||||||||  |||||| ||           |||||||| ||||||||| ||||    
T  26098563 caaggtctatatttatagtaaaagtataactcataaaattggaacgaataccacattgaagatacgtttttttatttctccttcaatgaaagaatttttg 26098662  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  26098663 tatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcac 26098762  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26098763 aaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 26098862  T
Q  335 tagcgatgataccaatttaacatcaaccaccatgctg 371  Q
    ||| |||||| ||||||||||||||||||||||||||    
T  26098863 tagtgatgatgccaatttaacatcaaccaccatgctg 26098899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 3373337 - 3373630
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          ||||||||    
T  3373337 aaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttca 3373436  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3373437 gtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 3373536  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3373537 atatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtcatactacaaca 3373630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 35 - 317
Target Start/End: Complemental strand, 27910413 - 27910131
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |           |||||||||||||||||||||||    
T  27910413 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatactttttttttttctccttcagtgaaagaatatttg 27910314  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27910313 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcac 27910214  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattct 317  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27910213 aaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactacaacattct 27910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 25803984 - 25803707
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| |||||| ||          |||||||||||||||||||||||    
T  25803984 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaatattacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 25803886  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25803885 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 25803786  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25803785 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 25803707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 15552203 - 15551925
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |||||| ||          |||||||||||||||||||||||    
T  15552203 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacgctgaagatacgttttttttttctccttcagtgaaagaatatttg 15552104  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  15552103 catcaaaaatgtcatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcac 15552004  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15552003 aatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 15551925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 35 - 293
Target Start/End: Complemental strand, 10586807 - 10586549
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  10586807 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttg 10586708  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10586707 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 10586608  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10586607 aaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 26097700 - 26097421
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| |           ||||||||||||||||||||||||    
T  26097700 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacatttttttttcctccttcagtgaaagaatatttgc 26097601  T
Q  136 atcaaaaatataatattccctt--tcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |    
T  26097600 atcaaaaatataacatttccttcttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagta 26097501  T
Q  234 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26097500 caaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 26097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 35 - 311
Target Start/End: Original strand, 18511525 - 18511800
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||| | ||  |||||| |||||||||||||| ||||||||||  ||||| ||          |||||||||||||||||||||||    
T  18511525 acaaggtctatatttatattaaacatataactcataaatttggaacgaataccacactaaagatacgttttttttt-ctccttcagtgaaagaatatttg 18511623  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  18511624 catcaaaaatataatatttcctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcac 18511723  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18511724 aaaatatattcgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaa 18511800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 18596614 - 18596326
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          |||||||||||| ||||||||||     
T  18596614 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgatagaatatttgt 18596515  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttat-----------tgtccataaatata 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||||||           ||||||||||||||    
T  18596514 atcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttatggtatatttattgtccataaatata 18596415  T
Q  225 ttttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18596414 ttttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatagtacaaca 18596326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 130 - 313
Target Start/End: Complemental strand, 21288713 - 21288529
Alignment:
Q  130 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgataca-aaaatatatttattgtccataaatatatttt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||  |||||||||||||||||||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  229 cagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatactacaaca 21288529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 18466648 - 18466453
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||| |           |||||| ||||||||||||||||    
T  18466648 acaaggtctatatttatagtaaaaatataactcataaatttggaacaaataccacactgaagatac---ttttttttctcctttagtgaaagaatatttg 18466552  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  18466551 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 161 - 306
Target Start/End: Original strand, 17415748 - 17415893
Alignment:
Q  161 aaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctttta 260  Q
    |||||||||||||||||||  | |||||||   |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17415748 aaatatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatctttta 17415847  T
Q  261 tatttttagcaacaatattctccatccatcaaattttgagtcatac 306  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17415848 tatttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 6661929 - 6662033
Alignment:
Q  209 attgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 308  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  309 caaca 313  Q
    |||||    
T  6662029 caaca 6662033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 15143373 - 15143262
Alignment:
Q  115 cttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtc 214  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  15143373 cttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtc 15143281  T
Q  215 cataaatatattttcagca 233  Q
    |||||||||||||| ||||    
T  15143280 cataaatatatttttagca 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 314
Target Start/End: Complemental strand, 40221361 - 40221281
Alignment:
Q  234 caaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaacat 40221281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 18466465 - 18466410
Alignment:
Q  259 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 18466410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 5779144 - 5779217
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||||| |||||    
T  5779144 agcacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 40221408 - 40221340
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  40221408 ctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 15143274 - 15143220
Alignment:
Q  259 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatactataaca 15143220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 41586519 - 41586577
Alignment:
Q  329 ctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  41586519 ctaaattagtgatgataccaatttaacatcaatcaccatgctgctctttcccttgcttc 41586577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 659712 - 659637
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||||||||||||||||  |||| || |||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  659712 attctccaccttgacttcaaatcagggatgatgccaatttaacatcaaccaccattgctgctctttccattgcttc 659637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 20044762 - 20044684
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| ||||||||||||||||||||||| |||| | ||||||||||||||| || | ||||||||||||| |||||||    
T  20044762 acaacaatctccaccttgactctaaattagtgatggtgccaatttaacatcaa-catcttgctgctctttcccttgcttc 20044684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 4410040 - 4409999
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  4410040 aaagtttgctctgatacaaggtctatatttatagtgaaagta 4409999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 10529395 - 10529436
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  10529395 aaagtttgctctgatacaaggtctatatttatagtgaaagta 10529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 39854467 - 39854426
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  39854467 aaagtttgctctgatacaaggtctatatttatagtgaaagta 39854426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 41586024 - 41586080
Alignment:
Q  42 ctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    ||||||||||||| |||||||||| |||| ||||||||| ||||||| || ||||||    
T  41586024 ctatatttatagtaaaagtataactcatagatttggaacgaataccagactgaagat 41586080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 20504453 - 20504528
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||||||||| ||||||  |||| || |||||| ||||||||||||||||||||| |||| |||| ||| |||||||    
T  20504453 attctccacattgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctactctctcccttgcttc 20504528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 31466497 - 31466572
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||||||||| ||||||  |||| || |||||| ||||||||||||||||||||| || || ||||||| |||||||    
T  31466497 attctccacattgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgttgttctttcccttgcttc 31466572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 2532750 - 2532784
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttatatttt 266  Q
    ||||| |||||||||||||||||||||||||||||    
T  2532750 cacaagatatatttgaaacaaatcttttatatttt 2532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 25921769 - 25921811
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  25921769 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 25921811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 4236611 - 4236570
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||||||| ||| |||||||||||||||||||| |||||||    
T  4236611 aagtttgctctgatacaaggtctatatttatagtaaaagtat 4236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 6661493 - 6661533
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttg 76  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  6661493 acaaggtctatatttatagtgaaa-tataactcataaatttg 6661533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 6745040 - 6745003
Alignment:
Q  24 tttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  6745040 tttgctctgatacaaggtctatatttatagtgaaagta 6745003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 6747283 - 6747246
Alignment:
Q  24 tttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  6747283 tttgctctgatacaaggtctatatttatagtgaaagta 6747246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 15354778 - 15354818
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  15354778 aaagtttgctttgatacaaggtctatatttatagtaaaagt 15354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 15357054 - 15357094
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  15357054 aaagtttgctttgatacaaggtctatatttatagtaaaagt 15357094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23665121 - 23665081
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  23665121 aaagtttgctttgatacaaggtctatatttatagtaaaagt 23665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 23667396 - 23667356
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  23667396 aaagtttgctttgatacaaggtctatatttatagttaaagt 23667356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 23742061 - 23742101
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  23742061 aaagtttgctttgacacaaggtctatatttatagtaaaagt 23742101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 23793466 - 23793506
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  23793466 aaagtttgctttgatacaaggtctatatttatagtaaaagt 23793506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 31542718 - 31542678
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  31542718 aaagtttgctttgatacaaggtctatatttatagtaaaagt 31542678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 31545063 - 31545023
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  31545063 aaagtttgctttgatacaaggtctatatttatagtaaaagt 31545023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 32520316 - 32520241
Alignment:
Q  160 aaaatatatttgcatcaaatcgttcttcatatgatacaaaaatata--tttattgtccataaatatattttcagca 233  Q
    ||||||| ||||||||||||  |||||| || | ||||||||||||  |||| | | |||||||||||||||||||    
T  32520316 aaaatatgtttgcatcaaatttttcttcgtacggtacaaaaatatatttttactctacataaatatattttcagca 32520241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 265; Significance: 1e-148; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 20 - 387
Target Start/End: Complemental strand, 52001 - 51635
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||  ||||| |||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          ||||||||    
T  52001 aaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttt-ctccttca 51903  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  51902 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataa 51803  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctcc 319  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51802 atatattttcaccacaaaatatatttgaaacaaatcttttatatttttagcaacattattctccatccatcaaattttgagtcatactacaacattctcc 51703  T
Q  320 accttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||||||    
T  51702 accttgactctaaattagcgatgatgtcaatttaacatcaaccaccaagctgctctttcccttgcttc 51635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 50230 - 50158
Alignment:
Q  242 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaacat 50158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  194 tacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 183935 - 183976
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||| || ||| |||||||||||||||||||||||||||    
T  183935 aaagtttactctgatacaaggtctatatttatagtgaaagta 183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 36 - 387
Target Start/End: Complemental strand, 5101018 - 5100669
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||| |  |||||| ||          ||||||||||||||||||||||||    
T  5101018 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccagattgaagatacgtttttttt--ctccttcagtgaaagaatatttgc 5100921  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  5100920 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcaca 5100821  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 335  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5100820 aaatatatttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 5100721  T
Q  336 agcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  5100720 agcgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 5100669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 20 - 387
Target Start/End: Original strand, 14787729 - 14788095
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||  ||||| |||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          ||||||||    
T  14787729 aaagtttagtatgatacaaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttt-ctccttca 14787827  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  14787828 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataa 14787927  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctcc 319  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14787928 atatattttcaccacaaaatatatttgaaacaaatcttttatatttttagcaacattattctccatccatcaaattttgagtcatactacaacattctcc 14788027  T
Q  320 accttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||| |||||||    
T  14788028 accttgactctaaattagcgatgatgtcaatttaacatcaaccaccaagctgctctttcccttgcttc 14788095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 35 - 387
Target Start/End: Original strand, 22132710 - 22133058
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  22132710 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 22132808  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22132809 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 22132908  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  22132909 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcatactacaacattctccaccttgactccaaat 22133008  T
Q  335 tagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    | | ||||||  |||   | ||||||||||| ||||||||||||| |||||||    
T  22133009 ttgtgatgatgtcaa---accatcaaccaccttgctgctctttcccttgcttc 22133058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 22134941 - 22135219
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  22134941 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttg 22135040  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22135041 aatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 22135140  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22135141 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 22135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 44600134 - 44600428
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnc-tccttc 118  Q
    |||||||||| | | |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||          | ||||||    
T  44600134 aaagtttgctttaatacaaggtctatatttatagtaaaagtataactcataaatttgaaacaaataccacactgaagattcgttttttttttcctccttc 44600233  T
Q  119 agtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccata 218  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44600234 agtgaaagaatatttgcatcaaaaatataatattcccttttaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccata 44600333  T
Q  219 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44600334 aatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 44600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 24348236 - 24347959
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||| |           |||||||||||||||||||||||    
T  24348236 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacattgaagatactttttttttttctccttcagtgaaagaatatttg 24348137  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  24348136 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcac 24348038  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24348037 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 24347959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 17662534 - 17662826
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |           ||||||||    
T  17662534 aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatac-ttttttttttctccttca 17662632  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  17662633 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcgtacggtacaaaaatatatttattgtccataa 17662732  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  17662733 atatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttgtagtcatactacaaca 17662826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 42 - 313
Target Start/End: Complemental strand, 56030459 - 56030189
Alignment:
Q  42 ctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgcatcaaa 141  Q
    ||||||||||||| ||| |||||| |||||||||||||  ||||||||||||||||| |           ||||||||||||||||||||||||| ||||    
T  56030459 ctatatttatagtaaaaatataactcataaatttggaaagaataccacaccgaagatac-ttttttttttctccttcagtgaaagaatatttgcaccaaa 56030361  T
Q  142 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatat 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  56030360 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatat 56030261  T
Q  242 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56030260 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 56030189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 30136516 - 30136331
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    |||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  30136516 ctccttcaatgaaagaatatttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttatt 30136417  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 297  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30136416 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 163 - 313
Target Start/End: Original strand, 47211158 - 47211308
Alignment:
Q  163 atatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 262  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttata 47211257  T
Q  263 tttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47211258 tttttagcaacaatattctccatccatcaaattttaagtcatactacaaca 47211308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 112 - 313
Target Start/End: Original strand, 38890517 - 38890701
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatatt-ccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttat 210  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  38890517 ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatatttgcatcaaatcgtccttcatacaatacaaaaatatatttat 38890616  T
Q  211 tgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaca 310  Q
    ||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38890617 tgtccata------------------aatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatgctaca 38890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 9022252 - 9022060
Alignment:
Q  113 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattg 212  Q
    ||||| |||||||||||||||||||||||       |||||||||| ||||||||||||||||||||| ||||||||| | || ||||||||||||||||    
T  9022252 tcctttagtgaaagaatatttgcatcaaa-------tattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattg 9022160  T
Q  213 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 312  Q
    || |||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||   ||||||| ||||||||| ||||||||||||    
T  9022159 tc-ataaatatattttcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatactacaac 9022061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 112 - 313
Target Start/End: Complemental strand, 10112815 - 10112626
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    |||||| ||||||| |||||||||||||||       ||||| |||||||| ||||||| ||||||||| | ||||||| ||||||||||||||||||||    
T  10112815 ctcctttagtgaaataatatttgcatcaaa-------tattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttatt 10112724  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    ||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| || |||||||| |||||||||||||    
T  10112723 gtccataaatatagtttcagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatactacaa 10112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 313
Target Start/End: Complemental strand, 9863650 - 9863499
Alignment:
Q  159 caaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttt 258  Q
    |||||||||||||||||||||| | ||||||     ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  259 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||| ||||||||  | |||||| |||||||||||||||| |||||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcatattacaaca 9863499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 53405149 - 53404998
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn-ctccttcagtgaaagaatattt 133  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| || ||           |||||| |||||||||||||||    
T  53405149 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaaatacgtttttttttttctcctttagtgaaagaatattt 53405050  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttct 185  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  53405049 gcatcaaaaatataatttttcctttcaaaatatatttgcatcaaatcgttct 53404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc-aacaatattctccatccatcaaattttgagtcatactaca 310  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  311 a 311  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 19322641 - 19322547
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatat 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||   |||||||||||||    
T  19322641 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 14789500 - 14789572
Alignment:
Q  242 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaacat 14789572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 303
Target Start/End: Original strand, 38209098 - 38209259
Alignment:
Q  147 aatattccctttcaaa-atatatttgcatcaaatcgttcttcatatgatacaaaaatatatttat--tgtccataaatatattttc--agcacaaaatat 241  Q
    |||||||| ||||||| |||||||||||||||||| | |||||||   |||||||||||||||||  | || | ||  || || |   ||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttatattttcaacaacaatcttcttgaagcacaaaatat 38209197  T
Q  242 atttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  38209198 atttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 36380164 - 36380087
Alignment:
Q  310 aacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||| ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  36380164 aacaatctccaccttgactctaaattagtgatgatgtcaatttaacatcaaccaccatgctgctctttcccttgcttc 36380087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 47211057 - 47211159
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  47211057 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttg 47211156  T
Q  135 cat 137  Q
    |||    
T  47211157 cat 47211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 54929094 - 54929180
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||  || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  54929094 aatattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 18709482 - 18709545
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  18709482 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagat 18709545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 5516771 - 5516833
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 297  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  5516771 aaaatatatttgaaacaattcatttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 386
Target Start/End: Complemental strand, 16455074 - 16454977
Alignment:
Q  289 tcaaattttgagtca-tactacaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgctt 386  Q
    |||||| |||||||| | |||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||    
T  16455074 tcaaatattgagtcacttctacaacaatctccaccttgactccaaattagtgatgatgccaatttaacatcaa-caccttgctgctctttcccttgctt 16454977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  154 cctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||| ||||||||||||||||||||| | |||||||    |||||||||||||| ||||||||||||||||||||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 18535332 - 18535410
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| ||||||||||||||||||||||| |||| | ||||||||||||||| |||| ||||||||||| | |||||||    
T  18535332 acaacaatctccaccttgactctaaattagtgatgctgccaatttaacatcaa-caccttgctgctcttttccttgcttc 18535410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Complemental strand, 24880257 - 24880183
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgctt 386  Q
    ||||||||||||||||  |||| || |||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  24880257 attctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctgctccttcctttgctt 24880183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 29609914 - 29609983
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttga 299  Q
    |||||||||||||||||||| |||||    ||| |||||||||||||||||| |||||||||||||||||    
T  29609914 agcacaaaatatatttgaaaaaaatcaagaatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 54929198 - 54929267
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||| |   ||||||||||||| |||||    
T  54929198 cacaaaatacatttaaatcaaatcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 3792484 - 3792422
Alignment:
Q  314 ttctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctct 375  Q
    |||||||||||||||||||||||| | ||||  |||||||| ||||||||||| |||||||||    
T  3792484 ttctccaccttgactctaaattagtggtgatgtcaatttaaccatcaaccaccttgctgctct 3792422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 2485169 - 2485210
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  2485169 aaagtttgctctgatacaaggtctatatttatagtgaaagta 2485210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 6764876 - 6764835
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  6764876 aaagtttgctctgatacaaggtctatatttatagtgaaagta 6764835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 3825120 - 3825188
Alignment:
Q  320 accttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    |||||||||  |||| || |||||| ||| ||||||||||||||||| ||||||||||||| |||||||    
T  3825120 accttgacttcaaatcagtgatgatgccactttaacatcaaccaccattgctgctctttcccttgcttc 3825188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 40637110 - 40637070
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  40637110 aagtttgctctgatacaaggtctatatttatagtgaaagta 40637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 47868437 - 47868397
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  47868437 aagtttgctctgatacaaggtctatatttatagtgaaagta 47868397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  194 tacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  171 gcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttca 230  Q
    |||||||||| | ||||||| | |||||||||||||||| | | ||||||||||||||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 5198457 - 5198415
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  5198457 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 5198415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 36920126 - 36920197
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttct 388  Q
    ||||||||||||||||  |||| || |||||| ||||||    |||||||||| ||||||||||||| ||||||||    
T  36920126 attctccaccttgacttcaaatcagtgatgatgccaatt----atcaaccaccttgctgctctttcccttgcttct 36920197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 38409236 - 38409194
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  38409236 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 38409194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 8631719 - 8631760
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||| ||||||||||||||||||||||    
T  8631719 aaagtttgctttgatacaaagtctatatttatagtgaaagta 8631760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 14633357 - 14633316
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||| || ||| |||||||||||||||||||||||||||    
T  14633357 aaagtttactctgatacaaggtctatatttatagtgaaagta 14633316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 24888832 - 24888791
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||||||| ||| |||||||||||||||||||| |||||||    
T  24888832 aagtttgctctgatacaaggtctatatttatagtaaaagtat 24888791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 52942758 - 52942806
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaat 84  Q
    |||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  52942758 acaaggtctatatttatagtgaaagtattactta-aaatttggaacaaat 52942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 5516703 - 5516747
Alignment:
Q  184 cttcatatgatacaaaaatatatttattgtccataaatatatttt 228  Q
    ||||||| |||| ||||||||||||||| || |||||||||||||    
T  5516703 cttcatacgataaaaaaatatatttattatctataaatatatttt 5516747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16934439 - 16934479
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  16934439 aaagtttgctttgatacaaggtctatatttatagtaaaagt 16934479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 253; Significance: 1e-140; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 36 - 387
Target Start/End: Original strand, 53915806 - 53916156
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||  ||||| ||          ||||||||||||||||||||||||    
T  53915806 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactcaagatacgttttttttt-ctccttcagtgaaagaatatttgc 53915904  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  53915905 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcaca 53916004  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  53916005 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccctcaaattttgagtcatactacaacattcttcgccttgactctaaatt 53916104  T
Q  336 agcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    || ||| ||  ||||||||||||||||||||||||||||||||| |||||||    
T  53916105 agtgataatgtcaatttaacatcaaccaccatgctgctctttcccttgcttc 53916156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 42992235 - 42991879
Alignment:
Q  30 atgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaat 129  Q
    |||| ||||||| |||||||||||| |||||||||| |||||||||||||  ||||  |||| |||||| ||          ||||||||||||||||||    
T  42992235 atgatacaaggtatatatttatagtaaaagtataactcataaatttggaattaatattacactgaagatacgttttttttt-ctccttcagtgaaagaat 42992137  T
Q  130 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  42992136 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc 42992037  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactc 329  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42992036 agcacaaaatatatttgaaacaaaccttttatatttttaacaacaatattctccatccatcaaattttgagtcatactacaacattcttcaccttgactc 42991937  T
Q  330 taaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  42991936 taaattagtgatgatgtcaatttaacatcaaccaccatgctgctctttcccttgcttc 42991879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 35 - 350
Target Start/End: Complemental strand, 458228 - 457913
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  458228 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttg 458129  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  458128 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcac 458029  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  458028 aaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 457929  T
Q  335 tagcgatgataccaat 350  Q
    |||  ||||| |||||    
T  457928 tagtaatgatgccaat 457913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 314
Target Start/End: Complemental strand, 746699 - 746421
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  746699 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 746601  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  746600 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 746501  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  746500 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 746421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 455851 - 455573
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||| ||          |||||||||||||||||||||||    
T  455851 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccgcactgaagatacgttttttttttctccttcagtgaaagaatatttg 455752  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  455751 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcac 455652  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  455651 aaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatcaaattttgagtcatactacaaca 455573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 35 - 314
Target Start/End: Original strand, 10621851 - 10622128
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  10621851 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtttttttt--ctccttcagtgaaagaatatttg 10621948  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  10621949 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcac 10622048  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10622049 aatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 10622128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 25533382 - 25533107
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||| |||||| ||          |||||||||||||||||||||||    
T  25533382 acaaggtctatatttatagtaaaagtataactcataaatttagaacaaatatcacactgaagatacgttttttt---ctccttcagtgaaagaatatttg 25533286  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  25533285 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaa 25533186  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25533185 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 25533107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 311
Target Start/End: Complemental strand, 42990235 - 42989954
Alignment:
Q  30 atgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaat 129  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |           ||||||||||||||||||    
T  42990235 atgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacattttttttttctccttcagtgaaagaat 42990136  T
Q  130 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc 229  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  42990135 atttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatactttc 42990036  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42990035 agcaaaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 51943318 - 51943042
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| |||||||||| |||||| ||          |||||||| ||||||||||||| |    
T  51943318 caaggtctatatttatagtaaaagtataaatcataaatttggaacgaataccacactgaagatacgtttttcttt-ctccttcaatgaaagaatatttac 51943220  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  51943219 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcaca 51943120  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51943119 aaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaaca 51943042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 1313357 - 1313082
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||| |||||  ||||| |           ||||||||||||||||||||||||    
T  1313357 caaggtctatatttatagtaaaagtataactcataaatttggaacgaatatcacactaaagatac--tttttttttctccttcagtgaaagaatatttgc 1313260  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||    
T  1313259 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacagaaatatatttattgtccataaatatattttcaacaca 1313160  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1313159 aaatatatttgaaacaaatcatttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 1313082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 41849090 - 41848804
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn--------ctccttcagtgaaag 126  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||                  ||| |||||| ||||    
T  41849090 acaatgtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttttttttttctctttcagttaaag 41848991  T
Q  127 aatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatatt 226  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41848990 aatatttgcatcaaaaatataatattccttttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatt 41848891  T
Q  227 ttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41848890 ttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 41848804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 4104208 - 4104483
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||   | ||          |||||||||||||||||||||||    
T  4104208 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactga---tacgttttttttttctccttcagtgaaagaatatttg 4104304  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  4104305 cataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcat 4104404  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  4104405 aaagtatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 4104483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 36 - 313
Target Start/End: Original strand, 53917974 - 53918250
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||| |||||||||| |||||| ||          |||||||| |||||||||||||||    
T  53917974 caaggtctatatttatagtaaaagtataactcataaatttgaaacgaataccacactgaagatacgttttttttt-ctccttcaatgaaagaatatttgc 53918072  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||| |||| ||||    
T  53918073 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacaca 53918172  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53918173 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactataaca 53918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 36 - 313
Target Start/End: Original strand, 27635937 - 27636212
Alignment:
Q  36 caaggtctatatttatagtgaaag-tataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||| |||| |||  |||||| |||||||||||||| |||||||||| |||||| |           |||||||||||||||||||||||    
T  27635937 caaggtctatatttgtagtaaaaaatataactcataaatttggaacgaataccacactgaagatac---atttttttctccttcagtgaaagaatatttg 27636033  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  27636034 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcac 27636133  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  27636134 aaaatatatttgaaactaatattttatatttttagcaacaatattctccatccatcaaattttaaatcatactacaaca 27636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 6561687 - 6561612
Alignment:
Q  239 tatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  6561687 tatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaacat 6561612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 25635127 - 25635048
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  25635127 acaacaatctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 25635048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 147 - 303
Target Start/End: Complemental strand, 11066429 - 11066255
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc----------------- 229  Q
    ||||||| |||| ||||||||||||||||||||  | ||||||||| || ||||||||||||||||||||||||| |||||||                     
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttcaacaacaatcttccgaa 11066330  T
Q  230 agcacaaaatatatttgaaacaaatcttttat-atttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||| |||||||    
T  11066329 agcacaagatatatttgaaacaaatcatttatcttttttagcaacaatattcttcatccatcaaattatgagtca 11066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 53974124 - 53974197
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  53974124 agcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 11072717 - 11072644
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||    
T  11072717 agcacaagatatatttgaaacaaatcatttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 23636732 - 23636654
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||||| |||  ||||||||||||| |||||||    
T  23636732 acaacaatctccaccttgactctaaattagtgatgatgccaatttaacatcaa-cacattgctgctctttcccttgcttc 23636654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 54287487 - 54287627
Alignment:
Q  158 tcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttca-----------------gcacaaaata 240  Q
    ||||||||||||||||||||||  | |||||||   ||||||||| |||||||| ||||||||||||||||||                 |||| |||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttcaacagcaatcttttggaagcacgaaata 54287586  T
Q  241 tatttgaaacaaatcttttatatttttagcaacaatattct 281  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  54287587 tatttgaaacaaatcttttatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 3306523 - 3306447
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||||||||||| |||||||||||| |||||| ||||   | ||||||||||| ||||||||||||| |||||||    
T  3306523 acaacattctccaccttaactctaaattagtgatgatgccaa---accatcaaccaccttgctgctctttcccttgcttc 3306447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 1619197 - 1619280
Alignment:
Q  306 ctacaacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccacca-tgctgctctttcctttgcttc 387  Q
    |||||||| ||||||||||||||||||||||| ||| ||  |||||||| |||||||||||| || |||||||||| |||||||    
T  1619197 ctacaacaatctccaccttgactctaaattagtgataatttcaatttaaccatcaaccaccattgttgctctttcccttgcttc 1619280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 53974011 - 53974077
Alignment:
Q  163 atatatttgcatcaaatcgttctt-catatgatacaaaaatatatttattgtccataaatatatttt 228  Q
    |||||||||||||||||| | ||| |||| | ||||||||||||||||||||| |||||||||||||    
T  53974011 atatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 28100593 - 28100669
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| ||||||||||||||||||||||| ||||||  |||   | ||||||||||||||||||||||| | |||||||    
T  28100593 acaacaatctccaccttgactctaaattagtgatgatgtcaa---accatcaaccaccatgctgctctttgccttgcttc 28100669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 28137826 - 28137902
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| |||||||||||||| |||||||  |||||| ||||   | ||||||||||||||||||||||||| |||||||    
T  28137826 acaacaatctccaccttgactttaaattaatgatgatgccaa---accatcaaccaccatgctgctctttcccttgcttc 28137902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 27000123 - 27000083
Alignment:
Q  273 caatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  27000123 caatattctccatccatcaaattttcagtcatactacaaca 27000083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 6561758 - 6561696
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| |||| ||||| ||||||    
T  6561758 acaaggtctatatttatagagaaa-tataactcataaatttggaacgaatatcacactgaagat 6561696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 14634682 - 14634745
Alignment:
Q  292 aattttgagtcatactacaacattctccaccttgactctaaattagcgatgataccaatttaac 355  Q
    ||||||||||||  || ||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  14634682 aattttgagtcactctccaacaatctccaccttgactctaaattagtgatgatgtcaatttaac 14634745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 4386522 - 4386444
Alignment:
Q  292 aattttgagtcatactacaacatt-ctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatg 368  Q
    ||||||||||||   ||||||||| |||||||||||||||||||| | ||||||  |||||||| ||||||||||||||    
T  4386522 aattttgagtcagtatacaacatttctccaccttgactctaaattggtgatgatgtcaatttaaccatcaaccaccatg 4386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 11072801 - 11072731
Alignment:
Q  163 atatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||||||||||||||| | | | ||| | ||||||||| ||||| |||||||||||| |||||||||||    
T  11072801 atatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 4308575 - 4308616
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  4308575 aaagtttgctctgatacaaggtctatatttatagtgaaagta 4308616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 18097423 - 18097493
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||||||||||||| ||||| || |||||| |||||    ||||||||||| ||||||||||||| |||||||    
T  18097423 attctccaccttgactttaaatcagggatgatgccaat----catcaaccaccttgctgctctttcccttgcttc 18097493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 35918247 - 35918284
Alignment:
Q  24 tttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35918247 tttgctatgatacaaggtctatatttatagtgaaagta 35918284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 51727300 - 51727341
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  51727300 aaagtttgctctgatacaaggtctatatttatagtgaaagta 51727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 25690651 - 25690691
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaagta 25690691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 53896490 - 53896530
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  53896490 aaagtttgctttgatacaaggtctatatttatagtgaaagt 53896530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 48361964 - 48362006
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||||| |||||| |||||||||||||||||||| |||||||    
T  48361964 aaagtttactatgatacaaggtctatatttatagtaaaagtat 48362006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 50493960 - 50493922
Alignment:
Q  22 agtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  50493960 agtttgctttgatacaaggtctatatttatagtgaaagt 50493922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 1618967 - 1619016
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaat 84  Q
    |||||||||||||||||||| |||||||  | |||||| |||||||||||    
T  1618967 acaaggtctatatttatagtcaaagtatccctcataaaattggaacaaat 1619016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 26720510 - 26720469
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||||||| ||| |||||||||||||||||||| |||||||    
T  26720510 aagtttgctctgatacaaggtctatatttatagtaaaagtat 26720469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 27101483 - 27101520
Alignment:
Q  24 tttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  27101483 tttgctctgatacaaggtctatatttatagtgaaagta 27101520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 27101558 - 27101595
Alignment:
Q  24 tttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  27101558 tttgctctgatacaaggtctatatttatagtgaaagta 27101595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 43228031 - 43227961
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||||||||||  |||| || |||||| |||||    ||||||||||| ||||||||||||| |||||||    
T  43228031 attctccaccttgacttcaaatcagtgatgatgccaat----catcaaccaccttgctgctctttcccttgcttc 43227961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6063742 - 6063782
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  6063742 aaagtttgctttgatacaaggtctatatttatagtaaaagt 6063782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6066091 - 6066131
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  6066091 aaagtttgctttgatacaaggtctatatttatagtaaaagt 6066131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6719405 - 6719445
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  6719405 aaagtttgctctgatacaaggtctatatttatagtaaaagt 6719445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 11170367 - 11170327
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  11170367 aaagtttgctctgatacaaggtctatatttatagtaaaagt 11170327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24979670 - 24979607
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaat 84  Q
    ||||||| || ||| ||||||| |||||||||||||||||||| ||  | |||||||||||||||    
T  24979670 aaagtttactctgatacaaggtatatatttatagtgaaagtattactta-aaatttggaacaaat 24979607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 43226048 - 43226008
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||| ||||||||||||||||||||||    
T  43226048 aagtttgctctgatacaatgtctatatttatagtgaaagta 43226008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 43228253 - 43228213
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||| ||||||||||||||||||||||    
T  43228253 aagtttgctctgatacaatgtctatatttatagtgaaagta 43228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 45882900 - 45882860
Alignment:
Q  22 agtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||| |||||| |||||||||||||||||||| |||||||    
T  45882900 agtttactatgatacaaggtctatatttatagtaaaagtat 45882860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 35 - 350
Target Start/End: Original strand, 35215907 - 35216221
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||| ||    
T  35215907 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagattc-atttttttttctccttcagtgaaagaatatctg 35216005  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  35216006 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcac 35216105  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35216106 aaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaacattctccaccttgactctaaat 35216205  T
Q  335 tagcgatgataccaat 350  Q
    ||| |||||| |||||    
T  35216206 tagtgatgatgccaat 35216221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 21 - 313
Target Start/End: Complemental strand, 42452741 - 42452449
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcag 120  Q
    ||||||||| ||| |||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| |           |||||||||    
T  42452741 aagtttgctctgatacaatgtctatatttataataaaagtataactcataaatttggaacaaataccacaccgaagatacattttttttttctccttcag 42452642  T
Q  121 tgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42452641 tgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaa 42452542  T
Q  221 tatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  42452541 tatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttaagtcatactacaaca 42452449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 35218288 - 35218565
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||||||          |||||||||||||||||||||||    
T  35218288 acaaggtctatatttatagtaaaagtataactcataaatttggagcaaataccacactgaagattcgttttttttt-ctccttcagtgaaagaatatttg 35218386  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  35218387 catcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcac 35218486  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35218487 aaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatactacaaca 35218565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 23452552 - 23452829
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| | |           |||||||||||||||||||||||    
T  23452552 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaggtac-ttttttttttctccttcagtgaaagaatatttg 23452650  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||     
T  23452651 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcat 23452750  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23452751 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 23452829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 112 - 313
Target Start/End: Original strand, 42923893 - 42924094
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  42923893 ctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatt 42923992  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42923993 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 42924092  T
Q  312 ca 313  Q
    ||    
T  42924093 ca 42924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 112 - 314
Target Start/End: Original strand, 27583713 - 27583908
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    ||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||  | ||||||||| || |||||||||||||||    
T  27583713 ctccttcagtgaaagaatatttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttatt 27583805  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27583806 gttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatactacaa 27583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 112 - 355
Target Start/End: Original strand, 28568556 - 28568792
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    ||||||| |||||||||||| |||||||||       |||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||    
T  28568556 ctccttcggtgaaagaatatatgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttatt 28568648  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| | | |||    
T  28568649 gtccataaatatattttcaaaacaaaatatatttgaaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca-atttcaa 28568747  T
Q  312 ca-ttctccaccttgactctaaattagcgatgataccaatttaac 355  Q
    || ||||||||||||||||| ||| || ||  || ||||||||||    
T  28568748 catttctccaccttgactcttaatcagtgacaatgccaatttaac 28568792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 27136368 - 27136505
Alignment:
Q  184 cttcatatgatacaaaaatatatttattgtccataaatat--------attttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaa 275  Q
    ||||||| | |||||||||||||||||| |||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  27136368 cttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaccaa 27136467  T
Q  276 tattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||| |||||||||||||||||||||||||||||||    
T  27136468 tattcttcatccatcaaattttgagtcatactacaaca 27136505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  218 aaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatac 306  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 303
Target Start/End: Complemental strand, 15693755 - 15693583
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc----------------- 229  Q
    ||||| |||||| ||||||||||||||||||||| | ||||||| | ||||||||||||||||||| ||||||||||||||||                     
T  15693755 aatatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagcaacaagtttttgga 15693656  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||    
T  15693655 agcacaaaatatatttgaaacaaatc-tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 28568411 - 28568346
Alignment:
Q  238 atatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  28568411 atatatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 41303549 - 41303655
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttata-tttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgact 328  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||| | | ||   ||||||||| |||||    
T  41303549 agcacaaaatatatttgaaacaaatcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca-atttcatatttctccaccctgact 41303647  T
Q  329 ctaaatta 336  Q
    ||||||||    
T  41303648 ctaaatta 41303655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 39287042 - 39286971
Alignment:
Q  162 aatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  39287042 aatatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatattt 208  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||  | ||| ||||| |||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 41304806 - 41304884
Alignment:
Q  154 cctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    ||||| ||||||||||||||||||||| | ||||||||| |||||||||||||||| | |||||||||||||| ||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatattgtcagca 41304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttct-tcatatgatacaaaaatatatttattgtccataaatatattttcagc 232  Q
    |||||| ||||| ||||||||||||||||||||| |||| |||||  |||||||||||| |||||||| ||||||||||||||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatc-ttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 6259355 - 6259430
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    |||||||||||||||| ||||| || |||||| ||||||||||||||||||||| || |||||||||| |||||||    
T  6259355 attctccaccttgactttaaatcagtgatgatgccaatttaacatcaaccaccattgatgctctttcccttgcttc 6259430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 13828838 - 13828913
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||||||||||||||||| | ||||||  |||||||| |||||||||||||| || ||||||| |||||||    
T  13828838 attctccaccttgactctaaatttgtgatgatgtcaatttaaccatcaaccaccatgatgttctttcccttgcttc 13828913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 39286952 - 39286892
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttga 299  Q
    ||||||||||||||||||||| |||||||||||||||||||| |    |||||||||||||||||    
T  39286952 aaaatatatttgaaacaaatcatttatatttttagcaacaatct----catccatcaaattttga 39286892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 41303457 - 41303535
Alignment:
Q  155 ctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||| |||||||||||| ||||| || | ||||| | | ||||||| |||||||| |||||||||||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatattttcagca 41303535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 5377729 - 5377770
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  5377729 aaagtttgctctgaaacaaggtctatatttatagtgaaagta 5377770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 42923810 - 42923867
Alignment:
Q  23 gtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaac 80  Q
    |||| ||||||  ||||||||||||||||||| |||||||||| ||||||||||||||    
T  42923810 gtttactatgattcaaggtctatatttatagtaaaagtataactcataaatttggaac 42923867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 7502633 - 7502582
Alignment:
Q  249 acaaatcttttatatttttagcaacaatattctccatccatcaaattttgag 300  Q
    |||||||||||||| ||| ||||||||| |||| ||||||||||||||||||    
T  7502633 acaaatcttttatactttgagcaacaatcttcttcatccatcaaattttgag 7502582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 31733279 - 31733356
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgctt 386  Q
    |||||| ||||||||||||||||||| ||| ||||||  |||||||||||||| ||   ||||||||||||| ||||||    
T  31733279 acaacaatctccaccttgactctaaactagtgatgatttcaatttaacatcaa-cattttgctgctctttcccttgctt 31733356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 41304898 - 41304964
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||||||||||||||  |||||||||||||||||||     ||| |||| |||||||||||||||||||||    
T  41304898 agcacaaaatatatttga--caaatcttttatattttta-----aatcttcttcatccatcaaattttgagtca 41304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 387
Target Start/End: Original strand, 21518946 - 21519019
Alignment:
Q  315 tctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||||||| ||||||  |||| || |||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  21518946 tctccacattgacttcaaatcagtgatgatgccaatctaacatcaaccaccattgctgctctttcccttgcttc 21519019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 42064473 - 42064432
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||||||| ||| |||||||||||||||||||| |||||||    
T  42064473 aagtttgctctgatacaaggtctatatttatagtaaaagtat 42064432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 45280281 - 45280322
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  45280281 aaagtttgctctgatacaaggtatatatttatagtgaaagta 45280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 24162508 - 24162548
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  24162508 aaagtttgctctgatacaaggtctatatttatagtaaaagt 24162548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 26932866 - 26933158
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||          ||||||||    
T  26932866 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacactgaagattcgttttttttt-ctccttca 26932964  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26932965 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 26933064  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
      ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26933065 taatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 26933158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 12195811 - 12196104
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||||    
T  12195811 aaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttttctccttca 12195910  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12195911 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa 12196010  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12196011 atatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaatttttgagtcatactacaaca 12196104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 18318044 - 18317751
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| ||          ||||||||    
T  18318044 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttca 18317945  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  18317944 gtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataa 18317845  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  18317844 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaaca 18317751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 313
Target Start/End: Original strand, 2629196 - 2629479
Alignment:
Q  30 atgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaat 129  Q
    |||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||| |||||| ||          ||||||||||||||||||    
T  2629196 atgatacaaggtctatatttatagtaaaagtataactaataaatttggaacaaatactacactgaagatacgtttttttttcctccttcagtgaaagaat 2629295  T
Q  130 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2629296 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttc 2629395  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  2629396 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 2629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 30967201 - 30966923
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||||    
T  30967201 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttg 30967102  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  30967101 catcaaaaatataatattcgctttcaaaatatatttgcattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcac 30967002  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30967001 aaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatactacaaca 30966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 30034918 - 30035196
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||  |||||| ||          |||||||||||||||||||| ||    
T  30034918 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaatatcacattgaagatacgtttttattttctccttcagtgaaagaatatctg 30035017  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  30035018 catcaaaaatataatattccctttcaaaatatatttgcattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcac 30035117  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30035118 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 30035196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 112 - 313
Target Start/End: Original strand, 5275727 - 5275928
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 5275926  T
Q  312 ca 313  Q
    ||    
T  5275927 ca 5275928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 20 - 313
Target Start/End: Original strand, 19704871 - 19705165
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn--ctcctt 117  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||  ||||| ||            ||||||    
T  19704871 aaagtttgctctgatacaaggtctatatttatagtgaaa-tataactcataaatttggaacgaatatcacacttaagatacgtttcttttttttctcctt 19704969  T
Q  118 cagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccat 217  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19704970 cagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccat 19705069  T
Q  218 aaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19705070 aaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatactacaaca 19705165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 40 - 305
Target Start/End: Complemental strand, 17852540 - 17852275
Alignment:
Q  40 gtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn--ctccttcagtgaaagaatatttgcat 137  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| |             ||| |||||||||| |||||||||||    
T  17852540 gtctatatttatagtaaaagtataactcataaatttggaacgaataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcat 17852442  T
Q  138 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaa 237  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| |||    
T  17852441 caaaaatataatattccctttcaaaatatatttgcatcaaatagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaa 17852342  T
Q  238 atatatttgaaacaaatcttttatatttttagca--acaatattctccatccatcaaattttgagtcata 305  Q
      ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  17852341 --atatttgaaacaaatcttttatatttttagcaacacaatattctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 116 - 311
Target Start/End: Complemental strand, 17011973 - 17011781
Alignment:
Q  116 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtcc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  17011973 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtcc 17011874  T
Q  216 ataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    ||||||||||||||  ||||||  |||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||    
T  17011873 ataaatatattttctacacaaa--atatttaaaacaaa-cttttatatttttagcaataatattcttcatccatcaaattttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 112 - 313
Target Start/End: Original strand, 22858343 - 22858536
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttatt 211  Q
    |||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||| |||| |  |||||| | ||||||||||||||||||    
T  22858343 ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaatatatttatt 22858434  T
Q  212 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  22858435 gtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtcatactacaa 22858534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 147 - 311
Target Start/End: Complemental strand, 20526708 - 20526548
Alignment:
Q  147 aatattccctttcaaaa-tatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatattt 245  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||| | ||||||||||||| ||     ||||||||||||||||||| |||||||||||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  246 gaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaa 311  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 147 - 378
Target Start/End: Complemental strand, 30445404 - 30445154
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttc----------------- 229  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||                     
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagcaacaatattctgga 30445305  T
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc--aaattttgagtcatactacaaca-ttctccaccttga 326  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||  | ||||||||||| | | ||||| || ||||||||||    
T  30445304 agcacaaaatatatttgaaacaaatattttatatttctagcaacaatattcttcatccatcatagattttgagtca-atttcaacatttttccaccttga 30445206  T
Q  327 ctctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttc 378  Q
    ||||||||||| |||||   ||||| | |||||| |||  ||||||||||||    
T  30445205 ctctaaattagtgatgaagtcaattaaccatcaatcactttgctgctctttc 30445154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 30443097 - 30443022
Alignment:
Q  230 agcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc--aaattttgagtca 303  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||  |||||||||||||    
T  30443097 agcaaaaaatatatttgaaacaaatctcttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 28038251 - 28038320
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctctt 376  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  28038251 acaacaatctccaccttgactttaaattagtgatgataccaatttaaccatcaaccaccattctgctctt 28038320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 30729347 - 30729422
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    ||||||||||||||||  |||| || |||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  30729347 attctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctgctctttcccttgcttc 30729422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1230545 - 1230586
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  1230545 aaagtttgctatgatacaaggtctatatttatagtgaaagta 1230586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 11138181 - 11138096
Alignment:
Q  292 aattttgagtca-tactacaacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctct 375  Q
    |||||||||||| | ||||||||||||||||||| |||||||||| | ||||||  |||||||| ||||||||||| || ||||||    
T  11138181 aattttgagtcacttctacaacattctccaccttaactctaaatttgtgatgatgtcaatttaaccatcaaccaccttgttgctct 11138096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 30443195 - 30443111
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||| | ||| |||||| |||||||||||||| | ||| ||| | |||||| ||||||||  |||||||||||||||||||||||    
T  30443195 aatatttcttttaaaaatacatttgcatcaaatcttcctttatacggtacaaacatatattt--tgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 3396100 - 3396024
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| ||||||||||||||||||||||| ||||||  |||   | || |||||||| ||||||||||||| |||||||    
T  3396100 acaacaatctccaccttgactctaaattagtgatgatgtcaa---accaccaaccaccttgctgctctttcccttgcttc 3396024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 28241618 - 28241658
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  28241618 aagtttgctctgatacaaggtctatatttatagtgaaagta 28241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 12158575 - 12158532
Alignment:
Q  256 ttttatatttttagcaacaatattctccatccatcaaattttga 299  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||    
T  12158575 ttttatatttttagcaacaatcttcttcattcatcaaattttga 12158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 15533221 - 15533296
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    |||||||||| |||||  |||| || |||||| ||| ||||||||||||||||| || |||||||||| |||||||    
T  15533221 attctccaccatgacttcaaataagtgatgatgccactttaacatcaaccaccattgttgctctttcccttgcttc 15533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 26944931 - 26944853
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    |||||| | ||||||||| ||||||||||| ||| || ||||||| ||||||| |||| | ||||||||||| |||||||    
T  26944931 acaacaatttccaccttgtctctaaattagtgatcatgccaattttacatcaa-caccttcctgctctttcccttgcttc 26944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 17759315 - 17759257
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgct 370  Q
    ||||||||||||||||||||||| | | |||| ||||||||| ||||||||||| ||||    
T  17759315 attctccaccttgactctaaatttgtgttgatgccaatttaaccatcaaccaccttgct 17759257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 15532992 - 15533040
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaat 84  Q
    |||||||||||||||||||| ||||||||||  | |||||||||||||||    
T  15532992 acaaggtctatatttatagtaaaagtataactta-aaatttggaacaaat 15533040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 17012047 - 17012003
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaac 80  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  17012047 acaaggtctatatttatagagaaa-tataactcataaatttggaac 17012003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 24435452 - 24435383
Alignment:
Q  307 tacaacattctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctct 375  Q
    ||||||||||||||||||||||   |||| | ||||||  |||| ||| |||||||||||||||||||||    
T  24435452 tacaacattctccaccttgacttataattggtgatgatgtcaatataaccatcaaccaccatgctgctct 24435383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 3833220 - 3833176
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatatt 279  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||||    
T  3833220 aaaatatatttaaaacaaatattttatgtttttagcaataatatt 3833176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 24543186 - 24543226
Alignment:
Q  314 ttctccaccttgactctaaattagcgatgataccaatttaa 354  Q
    |||||||||||||||||||||||| ||| || |||||||||    
T  24543186 ttctccaccttgactctaaattagtgataattccaatttaa 24543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 26066324 - 26066364
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  26066324 aaagtttgctttgatacaaggtctatatttatagtaaaagt 26066364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 26068595 - 26068635
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  26068595 aaagtttgctttgatacaaggtctatatttatagtaaaagt 26068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 36 - 387
Target Start/End: Complemental strand, 41384768 - 41384418
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||           ||||||| |||||||||||||||    
T  41384768 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttttt-tccttcaatgaaagaatatttgc 41384670  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |    
T  41384669 at-aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtata 41384571  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 335  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41384570 aaatatattcgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaatt 41384471  T
Q  336 agcgatgataccaatttaacatcaaccacca-tgctgctctttcctttgcttc 387  Q
    || ||||||  ||||||||||||||| |||| || |||||||||| |||||||    
T  41384470 agtgatgatgtcaatttaacatcaacaaccattgttgctctttcccttgcttc 41384418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 15809239 - 15808962
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||          |||||||||||||||||||||||    
T  15809239 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 15809141  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  15809140 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacac 15809041  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15809040 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactaaaaca 15808962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 43530163 - 43529871
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||| |           ||||||||    
T  43530163 aaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaatttggaataaataccacactgaagatac-ttttttttttctccttca 43530065  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  43530064 gtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataa 43529965  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43529964 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 43529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 35 - 313
Target Start/End: Original strand, 28283536 - 28283813
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| |||||| ||          |||||||||||||||||||||||    
T  28283536 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaatattacactgaagatacgttttttttt-ctccttcagtgaaagaatatttg 28283634  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28283635 catcaaaaatataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcac 28283734  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28283735 aaaatatatttgaaacaaatcttttatatttttagcaaaaatattctccatccatcaaattttgagtcatactacaaca 28283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 35 - 313
Target Start/End: Complemental strand, 3874030 - 3873750
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn-ctccttcagtgaaagaatattt 133  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |           ||||||||||||||||||||||    
T  3874030 acaaagtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatatgtttttttttttctccttcagtgaaagaatattt 3873931  T
Q  134 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtt-cttcatatgatacaaaaatatatttattgtccataaatatattttcagc 232  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3873930 gcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagc 3873831  T
Q  233 acaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3873830 acaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 3873750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 608765 - 608470
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnn---ctcct 116  Q
    |||||||||||||| | |||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||| ||             |||||    
T  608765 aaagtttgctatgatataaggtctatatttacagtgaaa-tataactcataaatttggaacaaatatcacaccgaagatacgttcttttttttttctcct 608667  T
Q  117 tcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtcca 216  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  608666 tcagtgaaagaatatttgcataaaatatataatattctctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtcca 608567  T
Q  217 taaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  608566 taaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtgatactacaaca 608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 36 - 312
Target Start/End: Complemental strand, 41382696 - 41382420
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          ||| ||||||||||||||||||||    
T  41382696 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctcattcagtgaaagaatatttgc 41382597  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    || |||||||||||||| |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| | |    
T  41382596 ataaaaaatataatatttcctttcaaaatatatttgcatcaaatcgttgttcatacggtacaaaaatatatttattgtccataaatatattttcagtata 41382497  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaac 312  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41382496 aaatatattcgaaacaaatcttttatatttttaacaacaatattctccatccatcaaattttgagtcatactacaac 41382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 32339252 - 32339094
Alignment:
Q  155 ctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  255 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 32339094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 3265635 - 3265753
Alignment:
Q  196 caaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 295  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  296 ttgagtcatactacaacat 314  Q
    |||||||||||||||||||    
T  3265735 ttgagtcatactacaacat 3265753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 181561 - 181434
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttg 134  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          |||||| ||||||||||||||||    
T  181561 acaaagtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttcttctcctttagtgaaagaatatttg 181462  T
Q  135 catcaaaaatataatattccctttcaaa 162  Q
    ||||||||||||||||||||||||||||    
T  181461 catcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 315 - 387
Target Start/End: Complemental strand, 21482121 - 21482049
Alignment:
Q  315 tctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccatgctgctctttcctttgcttc 387  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  21482121 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttc 21482049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32339329 - 32339266
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  32339329 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagat 32339266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 13986304 - 13986374
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||| |||||||||||||    
T  13986304 cacaaaatatatttaaaacaaatcttt-atatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24873498 - 24873561
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||||    
T  24873498 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaatacaacactgaagat 24873561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 30679186 - 30679256
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||||| | ||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||||    
T  30679186 cacaaaatatatctaaaacaaatcttttttatttttaccaac-atattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  147 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagca 233  Q
    |||||||||||| ||||||||||| |||||| || |||  |||| | |||||||||||||||| || ||||||||||||||||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattc-ttc--catacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 375
Target Start/End: Complemental strand, 15949173 - 15949111
Alignment:
Q  314 ttctccaccttgactctaaattagcgatgataccaatttaa-catcaaccaccatgctgctct 375  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| |||  |||||||||    
T  15949173 ttctccaccttgactctaaattggcgatgataccaatttaaccatcaatcactttgctgctct 15949111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 31574244 - 31574316
Alignment:
Q  308 acaacattctccaccttgactctaaattagcgatgataccaatttaac-atcaaccaccatgctgctctttcc 379  Q
    |||||||||| |||||||||||||||||||  |||||   |||||||| |||||||||| |||||||||||||    
T  31574244 acaacattcttcaccttgactctaaattagtaatgatgttaatttaacaatcaaccaccttgctgctctttcc 31574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 26268786 - 26268848
Alignment:
Q  314 ttctccaccttgactctaaattagcgatgataccaatttaac-atcaaccaccatgctgctct 375  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||| |||| | |||||||    
T  26268786 ttctccaccttgactctaaattagtgatgatgccaatttaactatcaatcacctttctgctct 26268848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 22684962 - 22685003
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  22684962 aaagtttgctctgatacaaggtctatatttatagtgaaagta 22685003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 31162249 - 31162188
Alignment:
Q  23 gtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaat 84  Q
    |||| |||||| |||||||||||||||||||| |||||||  | |||||| |||||||||||    
T  31162249 gtttactatgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaat 31162188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 13986214 - 13986285
Alignment:
Q  159 caaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttca 230  Q
    |||||||||||||||||||||| |  |||||  | ||||||||| |||| | | ||||||||||||||||||    
T  13986214 caaaatatatttgcatcaaatcttctttcatgcggtacaaaaatttattaactatccataaatatattttca 13986285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 356
Target Start/End: Complemental strand, 17849545 - 17849502
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaaca 356  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  17849545 attctccaccttgactctaaattagtgatgatgtcaatttaaca 17849502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 14807790 - 14807748
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  14807790 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 14807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 15072505 - 15072451
Alignment:
Q  313 attctccaccttgactctaaattagcgatgataccaatttaacatcaaccaccat 367  Q
    ||||||||||||||||  |||| || |||||| ||||| ||||||||||||||||    
T  15072505 attctccaccttgacttcaaatcagtgatgatgccaatctaacatcaaccaccat 15072451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 28251863 - 28251905
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    ||||||| |||||| |||||||||||||||||||| |||||||    
T  28251863 aaagtttactatgatacaaggtctatatttatagtaaaagtat 28251905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 261
Target Start/End: Original strand, 27820149 - 27820178
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttat 261  Q
    ||||||||||||||||||||||||||||||    
T  27820149 cacaaaatatatttgaaacaaatcttttat 27820178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 11701435 - 11701479
Alignment:
Q  259 tatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||| ||||||||| |||| | |||||||||||||||||||    
T  11701435 tatattttcagcaacaatcttcttcgtccatcaaattttgagtca 11701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 2028 - 1735
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttca 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||| ||          ||||||||    
T  2028 aaagtttgctatgaaacaaggtctatatttatagtgaaagtataacttataaatttggaacgaataccacactgaagatacgttttttttttctccttca 1929  T
Q  120 gtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataa 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  1928 gtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataa 1829  T
Q  220 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  1828 atatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatactacaaca 1735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 36 - 313
Target Start/End: Original strand, 11785 - 12061
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnctccttcagtgaaagaatatttgc 135  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||| ||          ||||||||||||||||||||||||    
T  11785 caaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgc 11883  T
Q  136 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcaca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  11884 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcaca 11983  T
Q  236 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11984 aaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgaatcatactacaaca 12061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 36 - 313
Target Start/End: Complemental strand, 79161 - 78883
Alignment:
Q  36 caaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagattcgnnnnnnnnnnc-tccttcagtgaaagaatatttg 134  Q
    ||||||||||||||||||| || ||||||| |||||||||||||| |||||||||| |||||| |           | ||||||||||||||||||||||    
T  79161 caaggtctatatttatagtaaaggtataactcataaatttggaacgaataccacactgaagatacattttttttttcctccttcagtgaaagaatatttg 79062  T
Q  135 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcac 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||| ||||     
T  79061 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcag 78962  T
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 313  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  78961 aaaatatatttgagacaaatcttttatatttttagcaacaatattctccatccatcaaattttaagtcatactacaaca 78883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 219 - 350
Target Start/End: Original strand, 1 - 132
Alignment:
Q  219 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaacattctc 100  T
Q  319 caccttgactctaaattagcgatgataccaat 350  Q
    ||||||||||||||||||| |||||| |||||    
T  101 caccttgactctaaattagtgatgatgccaat 132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 165 - 387
Target Start/End: Complemental strand, 4694 - 4480
Alignment:
Q  165 atatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 264  Q
    ||||||||||||||| || |||||||   ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  265 tttagcaacaatattctccatccatcaaattttgagtcatactacaacattctccaccttgactctaaattagcgatgataccaatttaacatcaaccac 364  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| |        ||||||  |||||| |||||||||||||||||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatactgcaacattctccatc--------aaattactgatgatgccaatttaacatcaaccac 4503  T
Q  365 catgctgctctttcctttgcttc 387  Q
    |||| | |||||||| |||||||    
T  4502 catgtttctctttcccttgcttc 4480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 4791 - 4729
Alignment:
Q  35 acaaggtctatatttatagtgaaagtataacccataaatttggaacaaataccacaccgaagat 98  Q
    ||||||||||||||||||| |||| |||||| |||||||||| ||| |||| ||||| ||||||    
T  4791 acaaggtctatatttatagagaaa-tataactcataaatttgaaacgaatatcacactgaagat 4729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 198 - 312
Target Start/End: Original strand, 2070 - 2184
Alignment:
Q  198 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  298 gagtcatactacaac 312  Q
    |||||||||||||||    
T  2170 gagtcatactacaac 2184  T

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Target: scaffold0468; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  112 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 170  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 57836 - 57905
Alignment:
Q  160 aaaatatatttgcatcaaatcgttcttcatatgatacaaaaatatatttattgtccataaatatattttca 230  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||||||||| |||| |||||||||||    
T  57836 aaaatatatttgcatcaaatt-ttcttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

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Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 57926 - 57995
Alignment:
Q  232 cacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    ||||||| |||| | |||||||||||||||| |||||| ||||  ||||  |||||||||||||||||||||    
T  57926 cacaaaaaatatataaaacaaatcttttatacttttagaaaca--attcatcatccatcaaattttgagtca 57995  T

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Target: scaffold0552 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1127 - 1168
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  1127 aaagtttgctctgatacaaggtctatatttatagtgaaagta 1168  T

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Target: scaffold0533 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 2232 - 2273
Alignment:
Q  235 aaaatatatttgaaacaaatcttttatatttttagcaacaat 276  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  2232 aaaatatatttgaaacaaatcttttatattttctgcaacaat 2273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 1971 - 2018
Alignment:
Q  162 aatatatttgcatcaaatcgttcttcatatgatacaaaaatatattta 209  Q
    |||||||||| |||||||  | ||||||||||||||||||||||||||    
T  1971 aatatatttgtatcaaatattccttcatatgatacaaaaatatattta 2018  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 41780 - 41820
Alignment:
Q  21 aagtttgctatgaaacaaggtctatatttatagtgaaagta 61  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  41780 aagtttgctctgatacaaggtctatatttatagtgaaagta 41820  T

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Target: scaffold0474 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 10493 - 10443
Alignment:
Q  253 atcttttatatttttagcaacaatattctccatccatcaaattttgagtca 303  Q
    |||||||||||||||| ||||||| || |  ||||||||||||||||||||    
T  10493 atcttttatatttttaacaacaatcttttttatccatcaaattttgagtca 10443  T

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Target: scaffold0131 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 15011 - 14969
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagtat 62  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  15011 aaagtttgctctgatacaaggtctatatttatagtaaaagtat 14969  T

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Target: scaffold0472 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 6191 - 6151
Alignment:
Q  20 aaagtttgctatgaaacaaggtctatatttatagtgaaagt 60  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  6191 aaagtttgctttgatacaaggtctatatttatagtaaaagt 6151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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