View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17147_low_6 (Length: 239)

Name: NF17147_low_6
Description: NF17147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17147_low_6
NF17147_low_6
[»] chr4 (67 HSPs)
chr4 (16-223)||(48111699-48111908)
chr4 (81-226)||(54017593-54017738)
chr4 (99-223)||(50459752-50459876)
chr4 (85-216)||(54936213-54936343)
chr4 (81-223)||(22183265-22183407)
chr4 (97-223)||(36608662-36608788)
chr4 (97-226)||(25483365-25483494)
chr4 (97-216)||(50002455-50002574)
chr4 (81-223)||(1731648-1731790)
chr4 (97-223)||(18932750-18932876)
chr4 (81-223)||(39404411-39404553)
chr4 (81-228)||(36572032-36572179)
chr4 (97-216)||(50630763-50630882)
chr4 (81-226)||(3340820-3340965)
chr4 (98-223)||(39404048-39404173)
chr4 (81-223)||(36629250-36629392)
chr4 (81-199)||(41707490-41707607)
chr4 (81-213)||(2740713-2740843)
chr4 (97-186)||(6975494-6975583)
chr4 (122-223)||(23817682-23817783)
chr4 (81-223)||(34646650-34646792)
chr4 (81-223)||(39792861-39793003)
chr4 (97-223)||(41370386-41370512)
chr4 (97-223)||(55933125-55933251)
chr4 (97-186)||(4955355-4955444)
chr4 (87-216)||(54108932-54109060)
chr4 (81-216)||(54343016-54343144)
chr4 (88-216)||(10245940-10246067)
chr4 (81-186)||(49302917-49303024)
chr4 (97-216)||(54108565-54108685)
chr4 (107-226)||(34004583-34004701)
chr4 (87-186)||(45496824-45496923)
chr4 (78-176)||(54017750-54017848)
chr4 (81-177)||(2741084-2741180)
chr4 (98-186)||(49880190-49880278)
chr4 (81-216)||(52884708-52884844)
chr4 (88-223)||(44621022-44621157)
chr4 (81-187)||(52884900-52885007)
chr4 (81-223)||(44620673-44620814)
chr4 (97-226)||(3700394-3700515)
chr4 (105-225)||(32941122-32941242)
chr4 (105-216)||(3244459-3244570)
chr4 (81-216)||(22027969-22028104)
chr4 (84-226)||(4390099-4390241)
chr4 (100-186)||(43174539-43174625)
chr4 (97-223)||(44620382-44620508)
chr4 (81-186)||(20826230-20826335)
chr4 (146-199)||(41707266-41707319)
chr4 (99-216)||(49076839-49076955)
chr4 (107-223)||(22028370-22028486)
chr4 (110-209)||(15841383-15841482)
chr4 (160-223)||(43174233-43174296)
chr4 (141-184)||(50788034-50788077)
chr4 (105-223)||(16889537-16889655)
chr4 (97-186)||(20825865-20825954)
chr4 (112-186)||(40067088-40067162)
chr4 (154-216)||(45489722-45489784)
chr4 (81-186)||(16888854-16888959)
chr4 (122-223)||(43827494-43827594)
chr4 (140-187)||(10396203-10396250)
chr4 (140-187)||(11197298-11197345)
chr4 (154-189)||(28034315-28034350)
chr4 (140-214)||(19504768-19504842)
chr4 (152-222)||(41370742-41370812)
chr4 (122-187)||(31691206-31691271)
chr4 (97-150)||(49076522-49076575)
chr4 (97-129)||(10246376-10246408)
[»] chr7 (50 HSPs)
chr7 (81-216)||(7517593-7517728)
chr7 (81-216)||(30244283-30244418)
chr7 (81-223)||(1085619-1085761)
chr7 (81-226)||(14681523-14681666)
chr7 (97-234)||(47129124-47129261)
chr7 (97-216)||(19122760-19122879)
chr7 (98-223)||(37533367-37533492)
chr7 (97-216)||(45433270-45433389)
chr7 (105-223)||(23380-23498)
chr7 (97-215)||(11845220-11845338)
chr7 (97-223)||(34218037-34218163)
chr7 (97-186)||(22567079-22567168)
chr7 (97-186)||(29157594-29157683)
chr7 (82-186)||(22566703-22566806)
chr7 (97-223)||(6054589-6054715)
chr7 (81-187)||(7554038-7554144)
chr7 (97-216)||(30245106-30245221)
chr7 (81-223)||(45434649-45434791)
chr7 (97-215)||(45754744-45754862)
chr7 (81-216)||(36534796-36534929)
chr7 (98-216)||(36939743-36939861)
chr7 (98-216)||(40094784-40094902)
chr7 (81-186)||(24177448-24177553)
chr7 (107-219)||(8128448-8128560)
chr7 (81-187)||(118340-118446)
chr7 (81-223)||(36622973-36623115)
chr7 (97-223)||(37533014-37533139)
chr7 (160-226)||(41910586-41910652)
chr7 (105-186)||(16569233-16569314)
chr7 (105-186)||(16596348-16596429)
chr7 (81-222)||(40230295-40230436)
chr7 (97-216)||(9901673-9901791)
chr7 (140-223)||(28300256-28300339)
chr7 (140-223)||(37167853-37167936)
chr7 (81-215)||(41854648-41854781)
chr7 (152-234)||(47129453-47129535)
chr7 (97-186)||(43241524-43241613)
chr7 (169-223)||(30244453-30244507)
chr7 (81-131)||(30245507-30245557)
chr7 (97-186)||(1085288-1085377)
chr7 (98-186)||(24838741-24838830)
chr7 (122-216)||(30253546-30253636)
chr7 (140-180)||(27391815-27391855)
chr7 (97-225)||(20599343-20599473)
chr7 (140-187)||(21416180-21416227)
chr7 (169-216)||(30253671-30253718)
chr7 (169-223)||(30245256-30245310)
chr7 (81-131)||(30255352-30255402)
chr7 (140-185)||(23569043-23569088)
chr7 (152-216)||(28300578-28300643)
[»] chr6 (38 HSPs)
chr6 (81-223)||(2378139-2378281)
chr6 (81-223)||(29518516-29518658)
chr6 (81-223)||(29518933-29519075)
chr6 (81-223)||(32741192-32741334)
chr6 (87-216)||(10074373-10074502)
chr6 (87-223)||(16454926-16455062)
chr6 (81-216)||(1127373-1127508)
chr6 (81-216)||(3409272-3409407)
chr6 (81-216)||(2377767-2377902)
chr6 (81-216)||(2579882-2580017)
chr6 (97-223)||(2578446-2578572)
chr6 (131-223)||(12071694-12071786)
chr6 (131-226)||(12085034-12085129)
chr6 (97-216)||(16107707-16107826)
chr6 (97-223)||(1846777-1846903)
chr6 (89-223)||(3409681-3409815)
chr6 (105-223)||(10073619-10073737)
chr6 (81-223)||(10073994-10074136)
chr6 (81-186)||(3415471-3415576)
chr6 (87-223)||(16454594-16454730)
chr6 (97-215)||(5832038-5832155)
chr6 (97-223)||(35210233-35210359)
chr6 (81-186)||(3058239-3058344)
chr6 (87-187)||(593748-593848)
chr6 (81-176)||(32460630-32460725)
chr6 (81-234)||(2579101-2579250)
chr6 (97-223)||(2843583-2843710)
chr6 (81-211)||(1950200-1950330)
chr6 (100-222)||(10911598-10911720)
chr6 (81-186)||(9062390-9062494)
chr6 (81-223)||(14748345-14748483)
chr6 (81-186)||(26544062-26544167)
chr6 (97-226)||(6999796-6999925)
chr6 (147-223)||(2578838-2578914)
chr6 (89-159)||(16108084-16108154)
chr6 (81-216)||(2579502-2579637)
chr6 (89-186)||(8481947-8482044)
chr6 (140-180)||(21130103-21130143)
[»] chr1 (46 HSPs)
chr1 (97-223)||(3875334-3875460)
chr1 (81-222)||(3550733-3550871)
chr1 (81-223)||(41142385-41142528)
chr1 (81-187)||(17294590-17294696)
chr1 (97-213)||(29798228-29798344)
chr1 (105-216)||(24600324-24600435)
chr1 (81-216)||(41157388-41157523)
chr1 (81-223)||(3537602-3537744)
chr1 (81-223)||(26661525-26661667)
chr1 (81-223)||(44290461-44290603)
chr1 (97-216)||(41157020-41157139)
chr1 (81-223)||(44290827-44290970)
chr1 (81-223)||(11977293-11977435)
chr1 (97-223)||(14318896-14319022)
chr1 (81-223)||(34649451-34649593)
chr1 (97-223)||(48588491-48588617)
chr1 (81-186)||(26661938-26662043)
chr1 (98-211)||(38804370-38804483)
chr1 (100-216)||(37556144-37556259)
chr1 (97-228)||(41759512-41759643)
chr1 (81-187)||(5575117-5575223)
chr1 (81-186)||(32594756-32594861)
chr1 (87-216)||(37555749-37555877)
chr1 (81-186)||(50052063-50052168)
chr1 (81-223)||(9955920-9956064)
chr1 (97-216)||(40082436-40082554)
chr1 (97-187)||(34364954-34365044)
chr1 (152-223)||(11977028-11977099)
chr1 (97-186)||(5528794-5528883)
chr1 (81-217)||(39066209-39066345)
chr1 (97-216)||(34364536-34364655)
chr1 (97-223)||(31767164-31767290)
chr1 (105-189)||(22077532-22077616)
chr1 (171-215)||(24131999-24132043)
chr1 (81-223)||(37850603-37850745)
chr1 (97-162)||(41184489-41184554)
chr1 (105-186)||(44043812-44043893)
chr1 (140-216)||(32168708-32168784)
chr1 (105-236)||(5319955-5320086)
chr1 (152-187)||(12466367-12466402)
chr1 (105-223)||(22077113-22077231)
chr1 (81-223)||(45084395-45084531)
chr1 (140-186)||(50051728-50051774)
chr1 (81-137)||(3537236-3537292)
chr1 (152-216)||(19283465-19283529)
chr1 (107-223)||(22077832-22077947)
[»] chr5 (48 HSPs)
chr5 (97-216)||(26074641-26074760)
chr5 (81-223)||(36492220-36492362)
chr5 (97-223)||(6500479-6500605)
chr5 (81-222)||(18603124-18603265)
chr5 (81-216)||(35150020-35150154)
chr5 (81-223)||(1028520-1028662)
chr5 (81-223)||(15370112-15370254)
chr5 (97-223)||(25327964-25328090)
chr5 (81-223)||(40296318-40296460)
chr5 (81-211)||(41170647-41170777)
chr5 (98-222)||(624226-624350)
chr5 (97-216)||(26075171-26075291)
chr5 (97-216)||(26074156-26074275)
chr5 (85-216)||(35167848-35167979)
chr5 (97-223)||(3295348-3295473)
chr5 (97-223)||(6500851-6500977)
chr5 (81-212)||(13415774-13415905)
chr5 (105-216)||(26590920-26591031)
chr5 (81-186)||(9498694-9498799)
chr5 (81-216)||(3295025-3295160)
chr5 (97-184)||(42405638-42405725)
chr5 (81-179)||(6224209-6224307)
chr5 (97-223)||(27502039-27502165)
chr5 (112-189)||(36522274-36522351)
chr5 (81-216)||(12662662-12662797)
chr5 (81-216)||(32487407-32487541)
chr5 (81-234)||(300972-301118)
chr5 (105-222)||(34753029-34753146)
chr5 (81-200)||(26074807-26074927)
chr5 (143-223)||(42435502-42435582)
chr5 (105-216)||(38427585-38427695)
chr5 (105-223)||(15370439-15370557)
chr5 (105-223)||(41632819-41632937)
chr5 (81-163)||(42508625-42508707)
chr5 (97-186)||(11417017-11417106)
chr5 (94-186)||(29549295-29549387)
chr5 (81-216)||(36568579-36568712)
chr5 (81-184)||(299502-299605)
chr5 (152-215)||(623902-623965)
chr5 (152-186)||(795272-795306)
chr5 (94-184)||(41635233-41635323)
chr5 (81-186)||(33747784-33747889)
chr5 (81-128)||(6225057-6225104)
chr5 (140-187)||(13042611-13042658)
chr5 (97-131)||(35914878-35914912)
chr5 (126-187)||(13785671-13785732)
chr5 (154-223)||(26900020-26900089)
chr5 (81-137)||(7768863-7768919)
[»] chr2 (46 HSPs)
chr2 (87-216)||(6422129-6422258)
chr2 (97-216)||(14745677-14745796)
chr2 (81-216)||(36178615-36178750)
chr2 (81-223)||(6421398-6421540)
chr2 (97-221)||(37632602-37632726)
chr2 (81-223)||(37106201-37106343)
chr2 (97-234)||(15511487-15511624)
chr2 (97-216)||(15880292-15880411)
chr2 (81-234)||(962611-962765)
chr2 (81-187)||(28254276-28254382)
chr2 (97-223)||(41283478-41283604)
chr2 (81-223)||(42514662-42514804)
chr2 (81-221)||(7598622-7598754)
chr2 (81-223)||(33731661-33731803)
chr2 (98-223)||(5542628-5542753)
chr2 (81-216)||(14745303-14745439)
chr2 (81-216)||(40733530-40733665)
chr2 (81-223)||(37105937-37106079)
chr2 (81-222)||(5543002-5543143)
chr2 (87-215)||(36178182-36178310)
chr2 (152-223)||(6421815-6421886)
chr2 (105-223)||(7598265-7598383)
chr2 (122-222)||(3672756-3672855)
chr2 (105-225)||(36005881-36006001)
chr2 (97-184)||(31259658-31259745)
chr2 (87-189)||(16542468-16542570)
chr2 (81-223)||(35580727-35580868)
chr2 (81-175)||(36178320-36178414)
chr2 (105-223)||(40679632-40679750)
chr2 (154-223)||(3673154-3673223)
chr2 (97-220)||(1769921-1770044)
chr2 (81-188)||(28531352-28531459)
chr2 (156-222)||(6421714-6421780)
chr2 (87-189)||(29873574-29873676)
chr2 (81-215)||(38796629-38796765)
chr2 (97-223)||(6713005-6713132)
chr2 (152-223)||(23346320-23346391)
chr2 (110-185)||(30323506-30323581)
chr2 (81-180)||(37895107-37895206)
chr2 (152-223)||(40733966-40734037)
chr2 (105-175)||(12910265-12910335)
chr2 (153-187)||(28226422-28226456)
chr2 (140-186)||(29676980-29677026)
chr2 (81-176)||(31468800-31468891)
chr2 (122-187)||(37894731-37894796)
chr2 (154-215)||(40163383-40163444)
[»] chr8 (53 HSPs)
chr8 (81-235)||(3038280-3038435)
chr8 (81-216)||(3669700-3669835)
chr8 (81-223)||(1513918-1514060)
chr8 (97-216)||(37544500-37544619)
chr8 (81-216)||(5420664-5420799)
chr8 (94-223)||(9309005-9309136)
chr8 (97-222)||(9483191-9483316)
chr8 (81-186)||(30359622-30359727)
chr8 (97-216)||(34834905-34835024)
chr8 (81-223)||(9309368-9309509)
chr8 (81-226)||(70274-70419)
chr8 (81-222)||(3670073-3670214)
chr8 (78-223)||(20870576-20870721)
chr8 (100-223)||(40518103-40518226)
chr8 (97-216)||(45122067-45122186)
chr8 (97-223)||(33113370-33113496)
chr8 (81-215)||(34835222-34835356)
chr8 (105-221)||(9608782-9608898)
chr8 (147-234)||(5915946-5916033)
chr8 (105-184)||(9507819-9507898)
chr8 (94-181)||(43274824-43274911)
chr8 (94-216)||(1014255-1014377)
chr8 (81-216)||(30441094-30441233)
chr8 (81-186)||(147464-147569)
chr8 (97-222)||(9482608-9482733)
chr8 (97-186)||(30359300-30359389)
chr8 (98-222)||(18371998-18372122)
chr8 (94-205)||(9609111-9609222)
chr8 (81-184)||(18380059-18380162)
chr8 (97-184)||(40579548-40579635)
chr8 (97-216)||(45122653-45122772)
chr8 (97-215)||(34835504-34835622)
chr8 (97-215)||(34835770-34835888)
chr8 (81-223)||(40518595-40518737)
chr8 (97-186)||(8794140-8794229)
chr8 (81-216)||(12283886-12284020)
chr8 (97-182)||(32305506-32305591)
chr8 (87-223)||(8918767-8918903)
chr8 (81-184)||(45121952-45122055)
chr8 (97-223)||(32640535-32640656)
chr8 (81-216)||(25561825-25561961)
chr8 (152-223)||(147904-147975)
chr8 (97-216)||(1013881-1014000)
chr8 (140-186)||(6651566-6651612)
chr8 (153-223)||(41129073-41129143)
chr8 (97-222)||(18371665-18371785)
chr8 (152-223)||(8919147-8919218)
chr8 (146-189)||(20995453-20995496)
chr8 (140-186)||(6731967-6732013)
chr8 (81-131)||(25561739-25561789)
chr8 (146-216)||(40579279-40579349)
chr8 (97-176)||(18372656-18372731)
chr8 (81-185)||(4154707-4154811)
[»] chr3 (49 HSPs)
chr3 (97-223)||(53117978-53118103)
chr3 (81-216)||(12114572-12114707)
chr3 (97-216)||(54017826-54017945)
chr3 (97-223)||(37990642-37990768)
chr3 (97-223)||(37990980-37991106)
chr3 (81-223)||(43346794-43346936)
chr3 (81-226)||(45395653-45395798)
chr3 (85-216)||(41359775-41359906)
chr3 (81-223)||(32589716-32589858)
chr3 (81-223)||(33803255-33803397)
chr3 (81-223)||(42342391-42342533)
chr3 (81-224)||(32462902-32463046)
chr3 (81-216)||(22304582-22304717)
chr3 (97-216)||(39934965-39935084)
chr3 (97-235)||(42342080-42342219)
chr3 (81-216)||(8327917-8328056)
chr3 (97-223)||(15772883-15773009)
chr3 (81-223)||(29644905-29645047)
chr3 (81-223)||(35946535-35946677)
chr3 (81-223)||(3135457-3135606)
chr3 (108-223)||(1634318-1634432)
chr3 (97-219)||(11661980-11662102)
chr3 (81-216)||(25755407-25755542)
chr3 (97-216)||(54018208-54018327)
chr3 (81-186)||(29644621-29644726)
chr3 (105-216)||(9240186-9240297)
chr3 (81-184)||(15773205-15773308)
chr3 (97-216)||(53577393-53577512)
chr3 (122-216)||(22303965-22304059)
chr3 (81-186)||(3135113-3135218)
chr3 (126-226)||(22303659-22303759)
chr3 (97-184)||(39389099-39389186)
chr3 (81-223)||(25739428-25739570)
chr3 (81-215)||(39914265-39914399)
chr3 (81-186)||(52634689-52634793)
chr3 (105-216)||(21832355-21832464)
chr3 (140-188)||(53596032-53596080)
chr3 (140-188)||(53596347-53596395)
chr3 (82-186)||(31190031-31190127)
chr3 (108-186)||(45901754-45901832)
chr3 (110-187)||(39336009-39336086)
chr3 (140-188)||(53596547-53596595)
chr3 (140-184)||(54017590-54017634)
chr3 (152-187)||(11661604-11661639)
chr3 (123-189)||(47964555-47964621)
chr3 (97-182)||(4823684-4823769)
chr3 (105-186)||(49336727-49336808)
chr3 (152-215)||(7766794-7766855)
chr3 (147-187)||(48127641-48127681)
[»] scaffold0391 (2 HSPs)
scaffold0391 (97-222)||(1110-1235)
scaffold0391 (122-216)||(1693-1795)
[»] scaffold0702 (2 HSPs)
scaffold0702 (81-216)||(524-659)
scaffold0702 (81-223)||(150-287)
[»] scaffold0078 (2 HSPs)
scaffold0078 (105-186)||(5394-5475)
scaffold0078 (105-216)||(5019-5130)
[»] scaffold0027 (1 HSPs)
scaffold0027 (97-223)||(47389-47515)
[»] scaffold0171 (1 HSPs)
scaffold0171 (81-184)||(17496-17601)
[»] scaffold0734 (1 HSPs)
scaffold0734 (97-158)||(5806-5867)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 48111908 - 48111699
Alignment:
Q  16 ataacaagtttacaaaattgtcatcatcattttattttatttttgctaataataagtctccattatatatatc--ccacctcagataaaagagtaaaggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||    
T  48111908 ataacaagtttacaaaattgtcatcatcattttattttatttttgctaataataagtctccattatatatatattccacctcggataaaagagtaaaggt 48111809  T
Q  114 tgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgat 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||| |||| ||    
T  48111808 tgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgtctctctcacaaatgtggtttttctaacctcaat 48111709  T
Q  214 gtgaacggtc 223  Q
    ||| ||||||    
T  48111708 gtggacggtc 48111699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 54017738 - 54017593
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||| |||||||||| |||||  ||||| ||||| ||||||||||||||||||||||||| |||    
T  54017738 tatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggtaagagtgtgatgt 54017639  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    ||||||  |    ||||||||||||||||||||||| |||||||||    
T  54017638 ctctcttgcttatgtggttgttctagcctcgatgtggacggtctcc 54017593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 50459752 - 50459876
Alignment:
Q  99 taaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggt 198  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| |||||| |||||||||||||||||||| |||||||||||||  |  | |||||    
T  50459752 taaaagagtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaagagcgtggtgtctctcttgcttgtgtggt 50459851  T
Q  199 tgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||| ||||||    
T  50459852 tgttctagcctcgatgtgcacggtc 50459876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 54936213 - 54936343
Alignment:
Q  85 tatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    |||||||| |||||||||| |||||||||||||||  || ||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  54936213 tatcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 54936312  T
Q  185 ctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||| |  |||||||||||||||||||||||    
T  54936313 ctcacta-tgtggttgttctagcctcgatgtg 54936343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 22183407 - 22183265
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| || |||||||||||||| ||||||||  ||||||||||||||||  ||||| ||||| |||||||||||| | ||||||||||| ||    
T  22183407 tatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggataagagtgtggcgt 22183308  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||  |   ||||||||||||||||||||| ||||||    
T  22183307 ctctctcacttgtacggttgttctagcctcgatgtggacggtc 22183265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 36608788 - 36608662
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||| ||||||||  | |||||||| ||||   |||||||||||  ||||||||||| ||||||||||||||||||||||||| || |||    
T  36608788 gataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctctcactagtgtg 36608689  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  36608688 gttgttctagcctcgatgtggacggtc 36608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 25483365 - 25483494
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||| |||||||||| ||||   ||||| ||||| |||||||||||| ||||||||||||||||||||||  |  | |||    
T  25483365 gataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtg 25483464  T
Q  197 gttgttctagcctcgatgtgaacggtctcc 226  Q
    |||||||||||||||||||| |||||||||    
T  25483465 gttgttctagcctcgatgtggacggtctcc 25483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 50002455 - 50002574
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  || ||||||| |||||  |||||||||||  ||||||||||| |||||||||||||||||||||| ||  | | |    
T  50002455 gataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttgtgcg 50002554  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  50002555 gttgttctagcctcgatgtg 50002574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 1731790 - 1731648
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||| |||||| ||| |||||  ||||| | ||| |||||||||||| ||||||||||||||||    
T  1731790 tatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggtaagagtgtggtgt 1731691  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
     |||||  |  | ||||||||||||||||| ||||| ||||||    
T  1731690 ttctcttgcttgtgtggttgttctagcctcaatgtggacggtc 1731648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 18932876 - 18932750
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||||||||| |  |||||| ||| |||||  ||||| ||||| ||||||||||||||||||||||||||||||||||| ||  | |||    
T  18932876 gataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctcttacttgagtg 18932777  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||||||||||||| ||||||    
T  18932776 gttgttatagcctcgatgtgtacggtc 18932750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 39404411 - 39404553
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||||||||||||| |||||  |||||||||| |||||  ||||| | ||  |||||||||||| || |||| ||||||||    
T  39404411 tatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgt 39404510  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||||||||||||||||||||    
T  39404511 ctctcttgcttgtgtggttgttctagcctcgatgtgaacggtc 39404553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 228
Target Start/End: Original strand, 36572032 - 36572179
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  ||||||||||||| ||||||||  |||||||||| | |||  ||||||||||| |||||||||||| ||| ||||| ||||||    
T  36572032 tatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggttagagtatggtgt 36572131  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctccga 228  Q
    ||||||| |  | | |||||||| ||||||||||||||||||| ||||    
T  36572132 ctctctcgcttgtgcggttgttcaagcctcgatgtgaacggtccccga 36572179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 50630882 - 50630763
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||||||||||| ||||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||||||||  |  | | |    
T  50630882 gataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcg 50630783  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||||| |||||||||||||    
T  50630782 gttgttttagcctcgatgtg 50630763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 226
Target Start/End: Original strand, 3340820 - 3340965
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||| | |||||| |||||||||||||||| ||  |||||||||| |||||  ||||| ||| | |||||||||||| ||||||||||||||||    
T  3340820 tatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgt 3340919  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    || |||  |  | | ||||||||||||||||||||| |||||||||    
T  3340920 ctttcttgcttgtggggttgttctagcctcgatgtggacggtctcc 3340965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 39404048 - 39404173
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    ||||||||||||||||||||||  |||||||||| |||||| |||||  |||  | |||||||||| ||||||||||||| ||||||||  |  | ||||    
T  39404048 ataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaagagtgtggcgtctctcttgcttgtgtgg 39404147  T
Q  198 ttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||||||||||| ||||||    
T  39404148 ttgttctagcctcgatgtggacggtc 39404173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 36629250 - 36629392
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||| ||| ||||  |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||||||    
T  36629250 tatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgt 36629349  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||||||||||||| ||||||    
T  36629350 ctctcttgcttgtgtggttgttctagcctcgatgtggacggtc 36629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 199
Target Start/End: Complemental strand, 41707607 - 41707490
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||   |||||||||||| ||  |||||  ||||  ||||||||||| ||||||||||||||||    
T  41707607 tatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggtttt-ggtaagagtgtggtgt 41707509  T
Q  181 ctctctcacaagcgtggtt 199  Q
    ||||||||| |||||||||    
T  41707508 ctctctcactagcgtggtt 41707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 2740713 - 2740843
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||||||||||||  |||||||||| ||||| |||||| |||   ||||||||||||| |||||||||||| ||    
T  2740713 tatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacgtaagagtgtggcgt 2740812  T
Q  181 ctctctcacaagcgtggttgttctagcctcgat 213  Q
    |||||||||    ||||||||||||||||||||    
T  2740813 ctctctcac--ttgtggttgttctagcctcgat 2740843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 6975583 - 6975494
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||| ||||||||||||| || |||||||||| |||||| |||||||||||| |||||| |||| ||||||||||||| ||||||||    
T  6975583 gataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaagattttgggtaagagtgtggcgtctctct 6975494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 23817783 - 23817682
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacgg 221  Q
    |||||||||| |||| | |||||  |||| |||||||||||| ||||||||||||||||||||||  | || ||||||||||||||||||||||| ||||    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacgg 23817684  T
Q  222 tc 223  Q
    ||    
T  23817683 tc 23817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 34646792 - 34646650
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||| ||||||||  |||||| ||| |||||| |||||  |||| |||||||||||| ||||||||||||||||    
T  34646792 tatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgt 34646693  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||     | |||||||||||||||| | |||| ||||||    
T  34646692 ctctctggtctgtgtggttgttctagccttgttgtggacggtc 34646650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 39793003 - 39792861
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||||||| || |||||| ||||||||  ||||||| || ||||    ||||  |||| |||||||||||| ||||||||||||||||    
T  39793003 tatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaagagtgtggtgt 39792904  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||||||||||||| ||||||    
T  39792903 ctctcttgcttgtgtggttgttctagcctcgatgtggacggtc 39792861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 41370386 - 41370512
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| |||||| |  |||||||||| |||||  ||||| ||||| |||||| ||||| ||||||||||| ||||||||||  |  | |||    
T  41370386 gataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtagtgtctctcttgcttgagtg 41370485  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  41370486 gttgttctagcctcgatgtggacggtc 41370512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 55933251 - 55933125
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||| |||||||||  |||||||||| |||||  ||||| ||||| |||||| ||||| |||||||||||||||||||||| ||  |        
T  55933251 gataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttacttgtaca 55933152  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  55933151 gttgttctagcctcgatgtggacggtc 55933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 4955444 - 4955355
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||| ||| |||||||||||  |||||||||| |||||| ||||| ||||| |||||||||||| ||||||||||||| ||||||||    
T  4955444 gataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 4955355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 54108932 - 54109060
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||| ||||| ||||||||||||||||||||||    
T  54108932 tcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gttttgggtaagagtgtggtgtctctct 54109030  T
Q  187 cacaagcgtggttgttctagcctcgatgtg 216  Q
      |  | | |||||||||||| ||||||||    
T  54109031 tgcttgtgcggttgttctagcttcgatgtg 54109060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 54343144 - 54343016
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||        ||||| |||||||||||| ||||||||||||||||    
T  54343144 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc-------ccattgccttaaggttttgggtaagagtgtggtgt 54343052  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | |||||||||||||||||||||||    
T  54343051 ctctcttgcttgagtggttgttctagcctcgatgtg 54343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 216
Target Start/End: Original strand, 10245940 - 10246067
Alignment:
Q  88 cccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||| || |||||||||||||||||||||||  |||||||||| |||||  ||||| |||   |||||||||||| ||||||||||||||||||| ||     
T  10245940 cccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac-cataaacccaaagccttaaggttttgggtaagagtgtggtgtctccctt 10246038  T
Q  188 acaagcgtggttgttctagcctcgatgtg 216  Q
     |  |  ||||||||||||||||||||||    
T  10246039 gcttgtctggttgttctagcctcgatgtg 10246067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 49302917 - 49303024
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataa--gtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggt 178  Q
    ||||| |||||| ||| |||||| |||||||||||||||| ||||||  |||| |||||  ||||| ||||| |||||||||||| ||||||||||||||    
T  49302917 tatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggt 49303016  T
Q  179 gtctctct 186  Q
    || |||||    
T  49303017 gtatctct 49303024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 54108565 - 54108685
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttat-aaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgt 195  Q
    ||||||| |||||||||||||||  ||||||||||||||||  || |||| |||| |||||||||||| | |||||||||||||||| |||  |  | ||    
T  54108565 gataaaatagtaaaggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttggctaagagtgtggtgtctatcttgcttgtgt 54108664  T
Q  196 ggttgttctagcctcgatgtg 216  Q
    ||||||||||||||| |||||    
T  54108665 ggttgttctagcctcaatgtg 54108685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 34004701 - 34004583
Alignment:
Q  107 taaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctag 206  Q
    |||||||||||||  |||||||||| |||||  |||||  |||| |||||||||||| | ||||||||||  ||||||||| |  | | |||||||||||    
T  34004701 taaaggttgaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgataagagtgtgccgtctctctcccttgtgcggttgttctag 34004603  T
Q  207 cctcgatgtgaacggtctcc 226  Q
    ||||||||||||||||||||    
T  34004602 cctcgatgtgaacggtctcc 34004583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 45496824 - 45496923
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || |||||||  ||||||||||||||  |||||||||| ||||| ||||||  ||||  ||||||||||| ||||||||||||||||||||||    
T  45496824 tcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctct 45496923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 54017848 - 54017750
Alignment:
Q  78 ttatatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtg 176  Q
    ||||||||||||||| || ||||||| |||||||||||||||  |||||||||| |||||  |||   |||||  ||||||||||||||||||||||||    
T  54017848 ttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagtgtg 54017750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 2741084 - 2741180
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtgg 177  Q
    ||||| |||||| ||||||| || ||||||||||||| |  |||||||||| |||||  |||| |||||| |||||||||||| |||||||||||||    
T  2741084 tatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttgggtaagagtgtgg 2741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 49880190 - 49880278
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| |||||||||||||||  |||||||||| |||||  ||||| ||| | |||||||||||| |||||||| |||||||||||||    
T  49880190 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagcgtggtgtctctct 49880278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 52884708 - 52884844
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggtttt-aggtaagagtgtggtg 179  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| | ||   ||||| ||||| ||||||||||||  |||||||||||||||    
T  52884708 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttggggtaagagtgtggtg 52884807  T
Q  180 tctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||  |  | | ||||| |||||||||||||||    
T  52884808 tctctcttgcttgtgcggttgatctagcctcgatgtg 52884844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 44621022 - 44621157
Alignment:
Q  88 cccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||| || ||||||| |||||||||||||||  |||||||||| ||| |  |||||  ||||  ||||||||||| |||||||||||||||| |||||     
T  44621022 cccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtggtgtttctctt 44621121  T
Q  188 acaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
     |  | | |||| |||||||||||||||| ||||||    
T  44621122 gcttgtgcggttattctagcctcgatgtggacggtc 44621157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 52884900 - 52885007
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggtttt-aggtaagagtgtggtg 179  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| ||||   ||||| ||||| ||||||||||||  ||||||| |||||||    
T  52884900 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttggggtaagaatgtggtg 52884999  T
Q  180 tctctctc 187  Q
    ||||||||    
T  52885000 tctctctc 52885007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 44620673 - 44620814
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||| ||| |||| ||||||||||  |||||||||| |||||  ||||| |||| ||||||||||||| |||||||||||||| |    
T  44620673 tatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataaa-ccataaccttaaggttttgggtaagagtgtggttt 44620771  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||| || |||||||||| ||||||    
T  44620772 ctctcttgcttgtgcggttgttatatcctcgatgtggacggtc 44620814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 3700394 - 3700515
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||| ||||||||  |||||||||||||||||        |||| |||||||||||| | ||||||| || |||||||||||   | |||    
T  3700394 gataaaagagtaaatgttgaacaccttataagtaaaaggact--------cattgccttaaggttttggataagagtatgatgtctctctcatttgtgtg 3700485  T
Q  197 gttgttctagcctcgatgtgaacggtctcc 226  Q
    ||| ||| |||||||||||| |||||||||    
T  3700486 gttattcaagcctcgatgtggacggtctcc 3700515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 32941242 - 32941122
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||| ||| ||| || |||||  |||| |||||||||||| ||||||||||||  ||||||||  |  | | |||||||||    
T  32941242 agtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggtaagagtgtgacgtctctcttgcttgtgcggttgttct 32941143  T
Q  205 agcctcgatgtgaacggtctc 225  Q
    |||||||||||| || |||||    
T  32941142 agcctcgatgtggacagtctc 32941122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 3244570 - 3244459
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||| |||||||||| |||||  |||||  ||||  ||||| ||||| ||||||| ||||  |||||||||||  |  |||||||||     
T  3244570 agtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttgggtaagaatgtgtcgtctctctcacttgtatggttgttcc 3244471  T
Q  205 agcctcgatgtg 216  Q
    ||||||||||||    
T  3244470 agcctcgatgtg 3244459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 22028104 - 22027969
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |  ||||||||||||  |||||||||| |||||  |||||   ||| |||||||||||| ||||||| ||||||||    
T  22028104 tatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgt 22028005  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||| |    ||||||||| ||| |||||||||    
T  22028004 ctctctcgcttatgtggttgttttagtctcgatgtg 22027969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 4390241 - 4390099
Alignment:
Q  84 atatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctc 183  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||||| ||||    | |   |||| | |||||||||| ||||||||||||  |||||    
T  4390241 atatcccacatcagataaaagagtaaaggttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgggtaagagtgtgacgtctc 4390142  T
Q  184 tctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    |||  |  | |  |||||||||||||||||| | |||||||||    
T  4390141 tcttgcttgtgcagttgttctagcctcgatgcggacggtctcc 4390099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 43174539 - 43174625
Alignment:
Q  100 aaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||||||||||||||||  |||||||||| |||||  ||||| | || ||||||| || || ||||||||||||| ||||||||    
T  43174539 aaaagagtaaaggttgaacaccttataagtaagaggacacataaacctatgaccttaaagtgttgggtaagagtgtggcgtctctct 43174625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 44620382 - 44620508
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||| ||| ||  |  ||||| ||||| |||||||||||| |||||||||||| ||| |||||  |  | |||    
T  44620382 gataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtgatgtttctcttgcttgtgtg 44620481  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||| ||| |||||| ||||||    
T  44620482 gttgttctaaccttgatgtggacggtc 44620508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 20826230 - 20826335
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||| ||||||||  |||||||||| || ||  ||||| ||||  ||||||  ||||||||||||||||| |||    
T  20826230 tatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgt 20826329  T
Q  181 ctctct 186  Q
    ||||||    
T  20826330 ctctct 20826335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 41707319 - 41707266
Alignment:
Q  146 ccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggtt 199  Q
    |||||||||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  41707319 ccattaccttaaggttttgggtaaaagtgtggtatctctctcactagcgtggtt 41707266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 49076955 - 49076839
Alignment:
Q  99 taaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggt 198  Q
    ||||| |||||||||||||||  ||||| |||| || ||  ||||| |||| ||||||||||||| ||| |||||||||||||| |||  |  | | |||    
T  49076955 taaaatagtaaaggttgaacaccttata-gtaagagaacccataaacccataaccttaaggttttgggttagagtgtggtgtctttcttgcttgtgcggt 49076857  T
Q  199 tgttctagcctcgatgtg 216  Q
    ||||||||||||||||||    
T  49076856 tgttctagcctcgatgtg 49076839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 22028486 - 22028370
Alignment:
Q  107 taaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctag 206  Q
    |||||||||||||  |||| ||||| |||||  |||||  ||||  ||||| ||||| ||||||||||||||||||||||  |  | | |||||||||||    
T  22028486 taaaggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctag 22028387  T
Q  207 cctcgatgtgaacggtc 223  Q
    |||| ||||| ||||||    
T  22028386 cctcaatgtggacggtc 22028370  T

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Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 15841482 - 15841383
Alignment:
Q  110 aggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcct 209  Q
    ||||||||||  || ||||| | |||| | |||||  |||| |||||||||||| |||||||||||| ||||||||||||  | ||||||| ||||||||    
T  15841482 aggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtgatgtctctctcacttgtgtggttgctctagcct 15841383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 43174233 - 43174296
Alignment:
Q  160 ttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||| |||||||||||||||||||||||||  | |||||||||| ||||| |||||| ||||||    
T  43174233 ttttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagccttgatgtggacggtc 43174296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 50788077 - 50788034
Alignment:
Q  141 taaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  50788077 taaatccattgccttaaggttttagataagagtgtggtgtctct 50788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 16889655 - 16889537
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    ||||||||||||| |  |||||||||| |||| | ||||| | | | |||||| ||||| ||||||||| ||||||||||||  |  | ||| |||||||    
T  16889655 agtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggtaagagtatggtgtctctcttccttgtgtgattgttct 16889556  T
Q  205 agcctcgatgtgaacggtc 223  Q
    | |||||||||| ||||||    
T  16889555 aacctcgatgtggacggtc 16889537  T

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Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 20825865 - 20825954
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccatta-ccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||||||||||||||  |||||| ||| || ||  ||||| || ||| |||||||||||| |||||||||||||||| |||||    
T  20825865 gataaaagagtaaaggttgaacaccttataaataagagcacccataaa-cctttagccttaaggttttgggtaagagtgtggtgtttctct 20825954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 40067088 - 40067162
Alignment:
Q  112 gttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||| ||||||||||| |||||  ||| ||||| ||||||||| |||| ||||| |||||| |||||||||    
T  40067088 gttgaacacattataagtaagaggacacatagatccactaccttaagattttgggtaaaagtgtgatgtctctct 40067162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 45489784 - 45489722
Alignment:
Q  154 ttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||||| ||||| ||||||||||||||||| |  || |||||||||||| |||||||||    
T  45489784 ttaaggttttgggtaatagtgtggtgtctctctcgcttgcatggttgttctagtctcgatgtg 45489722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 16888959 - 16888854
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || ||||||||||||| |  |||||||||| || || ||||||  ||||  |||| |||||| |||||||||||| |||    
T  16888959 tatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggtaagagtgtgatgt 16888860  T
Q  181 ctctct 186  Q
    ||||||    
T  16888859 ctctct 16888854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 43827494 - 43827594
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacgg 221  Q
    |||||| ||| |||||  |||||| |||| |||||||||||  | |||||||||||||||||||| ||  | | |||||||||| |||||||||| ||||    
T  43827494 ttataaataagaggacccataaattcattgccttaaggtttg-gataagagtgtggtgtctctcttacttgtgcggttgttctaacctcgatgtggacgg 43827592  T
Q  222 tc 223  Q
    ||    
T  43827593 tc 43827594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 10396203 - 10396250
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||| ||||| ||||| ||||||||||||||| ||||||||||||||    
T  10396203 ataaacccattgccttagggttttaggtaagagggtggtgtctctctc 10396250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 11197298 - 11197345
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  11197298 ataaacccattgccttagggttttgggtaagagtgtggtgtctctctc 11197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 28034315 - 28034350
Alignment:
Q  154 ttaaggttttaggtaagagtgtggtgtctctctcac 189  Q
    |||||||||||||||||||||||| |||||||||||    
T  28034315 ttaaggttttaggtaagagtgtggcgtctctctcac 28034350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 19504768 - 19504842
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatg 214  Q
    ||||||| ||| |||||| ||||| ||||||||||||| |||| |||  |  | |||||||||||||||||||||    
T  19504768 ataaatctattgccttaaagttttgggtaagagtgtggcgtctatcttgcttgtgtggttgttctagcctcgatg 19504842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 41370742 - 41370812
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    ||||||| |||||||||| | |||| ||||||||| ||  | |||||||||||| |||||||||| |||||    
T  41370742 ccttaagattttaggtaaaaatgtgatgtctctcttacttgagtggttgttctaacctcgatgtggacggt 41370812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 31691206 - 31691271
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||| |||| ||||    
T  31691206 ttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggcgtctatctc 31691271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 49076575 - 49076522
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccatt 150  Q
    ||||||| |||||||||||||||  |||||||||| ||||| |||||| |||||    
T  49076575 gataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccatt 49076522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 10246376 - 10246408
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagt 129  Q
    |||||||||||||||||||||||| ||||||||    
T  10246376 gataaaagagtaaaggttgaacatcttataagt 10246408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 7517593 - 7517728
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  7517593 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 7517692  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    || ||||||  | |||||||||||||||||||||||    
T  7517693 ctgtctcacttgtgtggttgttctagcctcgatgtg 7517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 30244283 - 30244418
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||||||||||||||||| |  |||||||||| |||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  30244283 tatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgt 30244382  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||||  | |||||||||| ||||||||||||    
T  30244383 ctctctcacttgtgtggttgttcaagcctcgatgtg 30244418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 1085761 - 1085619
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||| ||    
T  1085761 tatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgt 1085662  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||  | ||||||||||||||||||||||| ||||||    
T  1085661 ctctcttacttgtgtggttgttctagcctcgatgtggacggtc 1085619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 226
Target Start/End: Original strand, 14681523 - 14681666
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  || ||||||| ||| |  ||||| |||||  ||||||||||| |||||||||||||||     
T  14681523 tatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtg- 14681621  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
     ||||||||||| |||||||||||||||| |||||| |||||||||    
T  14681622 -tctctcacaagtgtggttgttctagccttgatgtggacggtctcc 14681666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 47129124 - 47129261
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||| | |||||||||| |||||  ||||| ||||  | |||||||||| |||| ||||||||||||||||||||||| |||    
T  47129124 gataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctctctcacaagtgtg 47129223  T
Q  197 gttgttctagcctcgatgtgaacggtctccgaactccc 234  Q
    |||||||||||||| ||||  |||||| |||| |||||    
T  47129224 gttgttctagcctcaatgtagacggtccccgagctccc 47129261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 19122760 - 19122879
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||| ||||||||||| |||||||||||| |||||||||||||||||| |||  |  | |||    
T  19122760 gataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtggtgtctatcttgcttgtgtg 19122859  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||||||||| |||||||||    
T  19122860 gttgttctagtctcgatgtg 19122879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 37533492 - 37533367
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    |||||| |||||||||||||||  |||||||||| |||||  ||||||||||| |||||||||||| |||||||||||||||||||| |  |  | | ||    
T  37533492 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcgg 37533393  T
Q  198 ttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||||||||||| ||||||    
T  37533392 ttgttctagcctcgatgtggacggtc 37533367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 45433270 - 45433389
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| || ||| ||||| | ||| ||||||| |||| ||||||||||||||||||||||  |  | | |    
T  45433270 gataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaagagtgtggtgtctctcttgcttgtggg 45433369  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  45433370 gttgttctagcctcgatgtg 45433389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 23498 - 23380
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||||||| |||||  ||||| | ||| |||||||||||| ||||||||||||||||||||||  || | | |||||||||    
T  23498 agtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttgcatgtgcggttgttct 23399  T
Q  205 agcctcgatgtgaacggtc 223  Q
    ||||||||| || ||||||    
T  23398 agcctcgatttggacggtc 23380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 11845220 - 11845338
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  ||||||||||| |||||||||||| | ||||||||||||||||||||  |  | |      
T  11845220 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctcttgcttgtgca 11845319  T
Q  197 gttgttctagcctcgatgt 215  Q
    |||||||||||||||||||    
T  11845320 gttgttctagcctcgatgt 11845338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 34218163 - 34218037
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  |||||||| | |||||| ||||| |||||  ||||||||||| ||||||||||||||||||||||| |  |  ||    
T  34218163 gataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagtgtggtgtctctctcgcttgtatg 34218064  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||| |||||||||||| ||||||    
T  34218063 gttgttcaagcctcgatgtggacggtc 34218037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 22567168 - 22567079
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||||||||||||||  |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||||||||||||    
T  22567168 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctct 22567079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 29157594 - 29157683
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||| |||||||||||||||  |||||||||| | |||  ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  29157594 gataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggtaagagtgtggtgtctctct 29157683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 22566806 - 22566703
Alignment:
Q  82 atatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtc 181  Q
    |||| |||||| || |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||| |||    
T  22566806 atatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg-gtc 22566708  T
Q  182 tctct 186  Q
    |||||    
T  22566707 tctct 22566703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 6054589 - 6054715
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  |||||||||| |||||  |||||  |||| |||||||||||| |||||||||||||||||||||  ||  |  ||    
T  6054589 gataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcctacttgtatg 6054688  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||||| |||||| ||||||    
T  6054689 gttgttctagccttgatgtggacggtc 6054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 7554038 - 7554144
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| ||||   ||||| ||||  |||||||||||| ||||||||||||||||    
T  7554038 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgt 7554137  T
Q  181 ctctctc 187  Q
    |||||||    
T  7554138 ctctctc 7554144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 30245106 - 30245221
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| | |||  |||||  |||| |||||||||||| ||||||||||||||||||||||     | |||    
T  30245106 gataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct----tgtgtg 30245201  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||| ||||||||||||    
T  30245202 gttgttcaagcctcgatgtg 30245221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 45434649 - 45434791
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  |||||   | | |||||||||||| |||||||||||| |||    
T  45434649 tatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtgatgt 45434748  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||  | |  ||||||||||||||||||||| |||||    
T  45434749 ctctcttacttgtggagttgttctagcctcgatgtgatcggtc 45434791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 45754744 - 45754862
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  |||||||||| | |||| ||||| ||||  |||||||||||| ||||||||||||||||||||||  |  | |||    
T  45754744 gataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtg 45754843  T
Q  197 gttgttctagcctcgatgt 215  Q
    ||||||| |||||||||||    
T  45754844 gttgttcaagcctcgatgt 45754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 36534929 - 36534796
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| ||||||||| ||||||| |||| ||||||||||  |||||||||| |||||  ||||| | |    ||||||||||| ||||||||||||| ||    
T  36534929 tatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtggcgt 36534830  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||  ||||| |||||||||| ||||||||||||    
T  36534829 ctctc--acaagtgtggttgttccagcctcgatgtg 36534796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 36939861 - 36939743
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    |||||| |||||| ||||||||  |||||||||| |||||  ||||||||||| |||||||||||| ||||| |||||||||| |||||  |    | ||    
T  36939861 ataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaaaagtgtggtgtttctcttgcttatgcgg 36939762  T
Q  198 ttgttctagcctcgatgtg 216  Q
    |||||||||||||||||||    
T  36939761 ttgttctagcctcgatgtg 36939743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 40094902 - 40094784
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    ||||||||||||||||| ||||  |||||||||| |||||  ||||| ||||   ||||||||||| ||||||||||||| ||||||||  |  | | ||    
T  40094902 ataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggtaagagtgtggcgtctctcttgcttgtgagg 40094803  T
Q  198 ttgttctagcctcgatgtg 216  Q
    |||||||||||||||||||    
T  40094802 ttgttctagcctcgatgtg 40094784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 24177448 - 24177553
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||| ||||||  ||||||||||  ||||  ||||| ||||| |||||| ||||| ||||||||||||| ||    
T  24177448 tatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgtggcgt 24177547  T
Q  181 ctctct 186  Q
    ||||||    
T  24177548 ctctct 24177553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 8128560 - 8128448
Alignment:
Q  107 taaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctag 206  Q
    |||||||||||||  ||||| |||| |||||  ||||| |||| ||||||||||||| | ||||||||||||||| ||||| |    |||||||||||||    
T  8128560 taaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggttaagagtgtggtgtcactctcgcttatgtggttgttctag 8128461  T
Q  207 cctcgatgtgaac 219  Q
    | |||||||||||    
T  8128460 catcgatgtgaac 8128448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 118446 - 118340
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||||||| || |||||||||||||||  | |||||||| ||||   ||||| |||||||| ||||||||| ||||||||||||| ||    
T  118446 tatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggtaagagtgtggcgt 118347  T
Q  181 ctctctc 187  Q
    || ||||    
T  118346 ctatctc 118340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 36622973 - 36623115
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||| ||||| |||||||||  ||||   ||||||||||| |||||||||||| |||| |||| |||||     
T  36622973 tatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttgggtaggagtatggtgc 36623072  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||  | ||| |||||||  ||| |||||| ||||||    
T  36623073 ctctcttacttgtgtgattgttctgaccttgatgtggacggtc 36623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 37533139 - 37533014
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  |||||  |||| |||||||||||| ||||| ||||||||||||||||  |  | | |    
T  37533139 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa-agtgtggtgtctctcttgcttgtgcg 37533041  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
     |||||||| |||||||||| ||||||    
T  37533040 cttgttctaacctcgatgtggacggtc 37533014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 41910652 - 41910586
Alignment:
Q  160 ttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||| ||| |||||    
T  41910652 tttttggtaagagtgtggtgtttctctcacaagtgtggttgttctaacctcgatgtggacgatctcc 41910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 16569233 - 16569314
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||||||||| |  |||||||||| |||||  ||||| ||||| |||||||||||| |||||||||| |||||||||||    
T  16569233 agtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctct 16569314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 16596429 - 16596348
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||||||||| |  |||||||||| |||||  ||||| ||||| |||||||||||| |||||||||| |||||||||||    
T  16596429 agtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctct 16596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 40230436 - 40230295
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  |||||| |||||| ||||||||| |||||||||| |||||  ||||| ||||   ||||||||||| ||||| ||| ||||||    
T  40230436 tatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgggtaaaagtctggtgt 40230337  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    ||||||  |||| || ||| ||||| |||| ||||| |||||    
T  40230336 ctctcttgcaagtgtagttattctaacctctatgtggacggt 40230295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 9901673 - 9901791
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||| ||||| ||| | |||   |||||  ||||  ||||||||||| ||||||||||||||||||||||  | || | |    
T  9901673 gataaaacagtaaaggttgaacatcttatacgtaga-ggatccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgctagtgcg 9901771  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||| ||||    
T  9901772 gttgttctagcctcggtgtg 9901791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 28300339 - 28300256
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||| ||||| ||||||| |||| ||||||||||||| ||||||||  |||| ||||||||||  ||||||||||| ||||||    
T  28300339 ataaacccattgccttaagattttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcgatgtggacggtc 28300256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 37167853 - 37167936
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||  ||||| ||||| ||||||||||||||||||||||  |  | | ||||||||||||||||||||| ||||||    
T  37167853 ataaatccattgacttaaagttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 37167936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 41854648 - 41854781
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||| |||||||||||||||||||||  ||||||| || | ||| |||||||  | | |||||||||||| ||||||||||||  ||    
T  41854648 tatatgtcccacatcag-taaaagagtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtgtgacgt 41854746  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    || ||| ||  | | ||||||||||||||| ||||    
T  41854747 ctttcttacttgtgcggttgttctagcctcaatgt 41854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 47129453 - 47129535
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtctccgaactccc 234  Q
    |||||||||||| ||||||||||||||||||||||  |  | | ||||| ||||||||||||||| |||||| |||| |||||    
T  47129453 ccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtggacggtccccgagctccc 47129535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 43241524 - 43241613
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||| | |||||||||||||  ||||||||||||||||| |||||   |||  ||||||||||||||||| ||| || |||||||||    
T  43241524 gataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttaggtaaaagtatgatgtctctct 43241613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 30244453 - 30244507
Alignment:
Q  169 agagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||||  | |||||||||| |||||||||||| ||||||    
T  30244453 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggacggtc 30244507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30245507 - 30245557
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaa 131  Q
    ||||| |||||| ||||||||||||||||||||||||||  ||||||||||    
T  30245507 tatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaa 30245557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 1085377 - 1085288
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||| |||||| ||||||||  | |||||||| || ||  |||||  |||| |||||||||||| |||||||||||||||| |||||    
T  1085377 gataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtttctct 1085288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 24838830 - 24838741
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaa-aaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||||||||||||||||||  |||||||||| |||||   ||||| || ||  ||||||||||| ||||||||||||  ||||||||    
T  24838830 ataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaagagtgtgacgtctctct 24838741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 30253546 - 30253636
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||||| || ||  |||||  |||| |||||||||||| ||||||||||||||||||||||     | |||||||||| ||||||||||||    
T  30253546 ttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct----tgtgtggttgttcaagcctcgatgtg 30253636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 27391855 - 27391815
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  27391855 ataaatccactgccttaaggttttaggtaagagtgtggtgt 27391815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 20599343 - 20599473
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagag--tgtggtgtctctctcacaagcg 194  Q
    ||||||| |||||||| | ||||  |||||| ||| ||||| ||||||  |||| |||||| ||||| ||||||||  ||||||||||||||  |  |      
T  20599343 gataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaacgttttgggtaagagagtgtggtgtctctcttgcttgta 20599442  T
Q  195 tggttgttctagcctcgatgtgaacggtctc 225  Q
    |||||||| || ||| |||||||||||||||    
T  20599443 tggttgttttaaccttgatgtgaacggtctc 20599473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 21416227 - 21416180
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  21416227 ataaacccattgccttagggttttgggtaagagtgtggtgtctctctc 21416180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 30253671 - 30253718
Alignment:
Q  169 agagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||||||||||||||||  | |||||||||| ||||||||||||    
T  30253671 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtg 30253718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 30245256 - 30245310
Alignment:
Q  169 agagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||||  | |||||||||| |||||| ||||| ||||||    
T  30245256 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcaatgtggacggtc 30245310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30255352 - 30255402
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaa 131  Q
    ||||| |||||| || |||||||||||||||||||||||  ||||||||||    
T  30255352 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaa 30255402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 23569088 - 23569043
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctc 185  Q
    ||||| ||||| |||||||||||| |||||||||||| ||||||||    
T  23569088 ataaacccattgccttaaggttttgggtaagagtgtgatgtctctc 23569043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 28300643 - 28300578
Alignment:
Q  152 ccttaaggttttagg-taagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||||||| || ||||||||||||||||||||  |  | |||||| ||||||||||||||||    
T  28300643 ccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgtggttattctagcctcgatgtg 28300578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 2378139 - 2378281
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| |||||||||||||||||||||||||| ||||||||    
T  2378139 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgt 2378238  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||||||||||||| ||||||    
T  2378239 ctctcttgcttgagtggttgttctagcctcgatgtggacggtc 2378281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 29518516 - 29518658
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  29518516 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgt 29518615  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||||||||| ||||||    
T  29518616 ctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 29518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 29518933 - 29519075
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  29518933 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgt 29519032  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||||||||| ||||||    
T  29519033 ctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 29519075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 32741192 - 32741334
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  32741192 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgt 32741291  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||||||||| ||||||    
T  32741292 ctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 32741334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 10074502 - 10074373
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || |||| || |||||||||||||||  |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||||||||||||    
T  10074502 tcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct 10074403  T
Q  187 cacaagcgtggttgttctagcctcgatgtg 216  Q
    ||| || |||||||||||||||||||||||    
T  10074402 cactagtgtggttgttctagcctcgatgtg 10074373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 16454926 - 16455062
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| ||||||||||||||||||||||||||  |||||||||| |||||  ||||| | ||| |||||||||||| ||||||||||||| ||||||||    
T  16454926 tcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctct 16455025  T
Q  187 cacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
      |  | | ||||||||||||||||||||| ||||||    
T  16455026 tgcttgtgcggttgttctagcctcgatgtggacggtc 16455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 1127373 - 1127508
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| || | ||||| |||||||||||||||  |||||||||| |||||| ||||| |||||||||||||||||| ||||||||||||| ||    
T  1127373 tatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgt 1127472  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||| ||    ||||||| |||| ||||||||||    
T  1127473 ctctcttacttatgtggttgctctaacctcgatgtg 1127508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 3409272 - 3409407
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||||||    
T  3409272 tatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgt 3409371  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | | |||||||||||||||||||||    
T  3409372 ctctcttgcttgtgcggttgttctagcctcgatgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 2377767 - 2377902
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || | |||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  2377767 tatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 2377866  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    || |||  |  | |||||| ||||||||||||||||    
T  2377867 ctttcttgcttgagtggtttttctagcctcgatgtg 2377902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 2580017 - 2579882
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||||||||||||||||||| ||||||||||| |||||  ||||| |||   |||||||||||| ||||||| ||||||||    
T  2580017 tatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgt 2579918  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | | |||||||||||||||||||||    
T  2579917 ctctcttgcttgtgcggttgttctagcctcgatgtg 2579882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 2578572 - 2578446
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||  |||||||||||| |||||||||||||||||||| |  |  | | |    
T  2578572 gataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcg 2578473  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  2578472 gttgttctagcctcgatgtggacggtc 2578446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 12071786 - 12071694
Alignment:
Q  131 aaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||| ||||| | || ||||||||||||| ||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||||    
T  12071786 aaaggactcataaacctatgaccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtc 12071694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 12085129 - 12085034
Alignment:
Q  131 aaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    |||||||| ||||| ||||  |||||||||||| ||||||||||||| |||||||||||  | ||||||||||||||||||||| |||||||||||    
T  12085129 aaaggactcataaaaccatggccttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgcgaacggtctcc 12085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 16107707 - 16107826
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||| ||||  |||||||||| |||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||  |  | | |    
T  16107707 gataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcg 16107806  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||| |||||||||||||||    
T  16107807 gttgctctagcctcgatgtg 16107826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 1846777 - 1846903
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| || ||  ||||||||||| |||||||||||| | |||||||||||||||||| |  |  | | |    
T  1846777 gataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctcttttgcttgtgcg 1846876  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  1846877 gttgttctagcctcgatgtggacggtc 1846903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 3409681 - 3409815
Alignment:
Q  89 ccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctca 188  Q
    |||| |||||||||| |||||| ||||||||| |||||||||| |||||  ||||| ||||| |||| |  |||| ||||||||||||||||||||||      
T  3409681 ccacatcagataaaatagtaaaagttgaacatcttataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctcttg 3409780  T
Q  189 caagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |  | | ||||||||||||||||||||| ||||||    
T  3409781 cttgtgcggttgttctagcctcgatgtggacggtc 3409815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 10073737 - 10073619
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||||||| ||||   |||||  ||||  |||||| |||| ||||||||||||||||||||||||| || |||||||||||    
T  10073737 agtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttgggtaagagtgtggtgtctctctcactagtgtggttgttct 10073638  T
Q  205 agcctcgatgtgaacggtc 223  Q
    ||| |||||||| ||||||    
T  10073637 agcatcgatgtggacggtc 10073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 10074136 - 10073994
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| || |||| || |||||| ||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||| ||||||||||    
T  10074136 tatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgt 10074037  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||| |     |||||||||||||||||| ||| ||||||    
T  10074036 ctctctcgcttatttggttgttctagcctcgacgtggacggtc 10073994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 3415471 - 3415576
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||| |||||| |||||||||||||||   ||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  3415471 tatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgt 3415570  T
Q  181 ctctct 186  Q
    ||||||    
T  3415571 ctctct 3415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 16454594 - 16454730
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| |||||||||||| |||| ||||||||  |||||||||| |||||  ||||| ||||| ||||||| |||| | ||||||||||| ||||||||    
T  16454594 tcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctctct 16454693  T
Q  187 cacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
      |  | | ||||||||||||||||||||| ||||||    
T  16454694 tgcttgtgcggttgttctagcctcgatgtggacggtc 16454730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 5832155 - 5832038
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| |||   ||||||| |||| ||||| |||||||||||||||| ||  | |||    
T  5832155 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaagccacc-ccttaagattttgggtaaaagtgtggtgtctctcttacttgtgtg 5832057  T
Q  197 gttgttctagcctcgatgt 215  Q
    |||||||||||||||||||    
T  5832056 gttgttctagcctcgatgt 5832038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 35210233 - 35210359
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| |||||||||||||||| ||| |  |  | | |    
T  35210233 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggtaagagtgtggtgtttcttttgcttgtgcg 35210332  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||| ||||||||||||||| ||||||    
T  35210333 gttgctctagcctcgatgtggacggtc 35210359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 3058239 - 3058344
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||  ||||   ||||| ||||| |||||||||||| ||||||||||||||||    
T  3058239 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggtaagagtgtggtgt 3058338  T
Q  181 ctctct 186  Q
    ||||||    
T  3058339 ctctct 3058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 593848 - 593748
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || |||||||||||||||||||||||  |||||||||| |||||| ||||| | | | |||||||||||| ||||| |||||||| |||||||    
T  593848 tcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggtaatagtgtggtatctctct 593749  T
Q  187 c 187  Q
    |    
T  593748 c 593748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 32460725 - 32460630
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtg 176  Q
    ||||| |||||| ||  |||||| |||||||||||||||  |||||||||| |||||| ||||| ||||| |||||||||||| ||||||||||||    
T  32460725 tatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtg 32460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 2579250 - 2579101
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||| ||||||||  |||||||    ||||   ||||| |||| || |||||| ||| | ||||||||||||||    
T  2579250 tatatgtcccacatcggataaaagagtaaaagttgaacaccttataag----aggaaccataaacccataactttaaggctttggctaagagtgtggtgt 2579155  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctccgaactccc 234  Q
    ||||||  |  | ||||||||||||||||||||||| |||||| |||| |||||    
T  2579154 ctctcttgctcgtgtggttgttctagcctcgatgtgcacggtccccgagctccc 2579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 2843583 - 2843710
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggactt-ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgt 195  Q
    ||||||| | |||| ||||||||  |||||||||| |||||   |||||  |||| |||||||||||| |||||||||||||| |||||||  |  | ||    
T  2843583 gataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgagt 2843682  T
Q  196 ggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||||||||||||| ||||||    
T  2843683 ggttgttctagcctcgatgtggacggtc 2843710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 211
Target Start/End: Complemental strand, 1950330 - 1950200
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  ||| |||||| ||||   ||||||| | | ||||||||||||  |||||||||||  ||    
T  1950330 tatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaagagtgtgacgt 1950231  T
Q  181 ctctctcacaagcgtggttgttctagcctcg 211  Q
    |||||| ||  | | ||||||||||||||||    
T  1950230 ctctcttacttgtgcggttgttctagcctcg 1950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 10911598 - 10911720
Alignment:
Q  100 aaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggtt 199  Q
    |||| |||||||||||||||  |||||||||| |||||| |||||  |||| |||||| |||||   |||||||||| ||||||||| || |  || |||    
T  10911598 aaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaagttttgaataagagtgtgatgtctctcttactaatgttgtt 10911697  T
Q  200 gttctagcctcgatgtgaacggt 222  Q
    |||| |||||||||||| |||||    
T  10911698 gttcaagcctcgatgtggacggt 10911720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 9062494 - 9062390
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||| |||||||||| |||||| |||||  ||||  ||||| ||||| ||||| |||||||| |    
T  9062494 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaactcattgtcttaa-gttttgggtaaaagtgtggtat 9062396  T
Q  181 ctctct 186  Q
    ||||||    
T  9062395 ctctct 9062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 14748483 - 14748345
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||| ||| |||||  |||||  |||| | |||||||||| |||||||||||||       
T  14748483 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggtaagagtgtgg--- 14748387  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
     |||||  |  | ||||||||||||||||||||||| ||||||    
T  14748386 -tctcttgcttgtgtggttgttctagcctcgatgtggacggtc 14748345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 26544062 - 26544167
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| |||   ||||||||||||  ||||||||||| |||    
T  26544062 tatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagtaagagtgtgatgt 26544161  T
Q  181 ctctct 186  Q
    ||||||    
T  26544162 ctctct 26544167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 6999925 - 6999796
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  ||||| |||| ||||   |||||  || | |||||||||||| | ||||||||||| ||||||||  | |  |||    
T  6999925 gataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataagagtgtggcgtctctcttgctaatgtg 6999826  T
Q  197 gttgttctagcctcgatgtgaacggtctcc 226  Q
    |||||||||| ||||||||| |||||||||    
T  6999825 gttgttctagtctcgatgtggacggtctcc 6999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 2578914 - 2578838
Alignment:
Q  147 cattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||||||||| |||||||||||||||||||| |  |  | |||||||||||  |||||||||| ||||||    
T  2578914 cattaccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgtggttgttctgacctcgatgtggacggtc 2578838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 16108084 - 16108154
Alignment:
Q  89 ccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaagg 159  Q
    |||| ||||||||||||||||| ||||||||  |||||||||| |||||  ||||| ||||| ||||||||    
T  16108084 ccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaacccattgccttaagg 16108154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 2579637 - 2579502
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || || |||| ||||||||| | | |  |||||||||| ||| |  |||||  |||| |||||||||||| ||||| ||| ||||||    
T  2579637 tatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtatggtgt 2579538  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | |||||||||||| ||||||||||    
T  2579537 ctctcttgcttgtgtggttgttctaacctcgatgtg 2579502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 8481947 - 8482044
Alignment:
Q  89 ccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||| ||||||| || |||  ||||||||||  |||||| | | | |||| |||||  |||| ||||||| |||| ||||||||||||||||||||||    
T  8481947 ccacatcagatataaaagtggaggttgaacactttataaatgagatgactcataaactcattgccttaagattttgggtaagagtgtggtgtctctct 8482044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 21130143 - 21130103
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||||||||| |||||||||||| | ||||||||||||||    
T  21130143 ataaatccattgccttaaggttttggataagagtgtggtgt 21130103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 3875460 - 3875334
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||||||| |||  |||||||||| |||||| ||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || |||    
T  3875460 gataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtggagtctctctcactagtgtg 3875361  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  3875360 gttgttctagcctcgatgtggacggtc 3875334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 3550733 - 3550871
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  |||||||||| |||||| ||||| ||||| |||||| ||||| ||||||||||||||||    
T  3550733 tatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggtaagagtgtggtgt 3550832  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    ||||||  | |    ||||||||||||||||||||| |||||    
T  3550833 ctctcttgcta---cggttgttctagcctcgatgtggacggt 3550871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 41142385 - 41142528
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggt-aagagtgtggtg 179  Q
    ||||| |||||| || ||||||| |||||||||||||||  ||||||||||||||||  ||||| ||||| |||||||||||| ||| |||||||||| |    
T  41142385 tatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttggtaaagagtgtggcg 41142484  T
Q  180 tctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||  |  | ||||||||||||||||||||||| ||||||    
T  41142485 tctctcttgcttgtgtggttgttctagcctcgatgtggacggtc 41142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 17294590 - 17294696
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  17294590 tatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 17294689  T
Q  181 ctctctc 187  Q
    |||||||    
T  17294690 ctctctc 17294696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 29798228 - 29798344
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||| ||||| ||||| ||||||||| || | ||||||||||||||||||||  |||| |||    
T  29798228 gataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggataagagtgtggtgtctctcttgcaagtgtg 29798327  T
Q  197 gttgttctagcctcgat 213  Q
    ||||||||| |||||||    
T  29798328 gttgttctaacctcgat 29798344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 24600435 - 24600324
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    ||||||||||||||||||||||||||| || ||| |||||  ||||  |||||||||||  |||||||||||||||||||||| | ||  ||||||||||    
T  24600435 agtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtgtaagagtgtggtgtctctctcgctagtatggttgttct 24600336  T
Q  205 agcctcgatgtg 216  Q
    ||||||||||||    
T  24600335 agcctcgatgtg 24600324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 41157388 - 41157523
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||||||||||||||||| ||||||||  |||||||||| |||||  ||||| ||||| |||| |||||||  |||||||||||||||    
T  41157388 tatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggttttgagtaagagtgtggtgt 41157487  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    || |||  |  | |||||||||||||||||||||||    
T  41157488 ctgtcttgcttgtgtggttgttctagcctcgatgtg 41157523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 3537744 - 3537602
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||| ||||| ||||| |||||| |||||  ||||||||||| ||||||||||||| ||    
T  3537744 tatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgt 3537645  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||||||||| ||||||    
T  3537644 ctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 3537602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 26661667 - 26661525
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || | |||||||||||||||||||||  |||||||| | |||||  |||||  |||| |||||||||||| ||||||||||||||||    
T  26661667 tatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgt 26661568  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||| |  | |||||||||| ||||||||| || ||||||    
T  26661567 ctctctcgcttgtgtggttgttcaagcctcgatatggacggtc 26661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 44290603 - 44290461
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||| |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||| ||||||    
T  44290603 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtatggtgt 44290504  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    || |||  |  |   ||||||||||||||||||||| ||||||    
T  44290503 ctttcttgcttgtacggttgttctagcctcgatgtggacggtc 44290461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 41157020 - 41157139
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  |||||  |||| | |||||||||| |||||||||||||||||||| |  |  | |||    
T  41157020 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggtaagagtgtggtgtctctattgcttgtgtg 41157119  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  41157120 gttgttctagcctcgatgtg 41157139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 44290970 - 44290827
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggt-aagagtgtggtg 179  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||| ||||||||||||    
T  44290970 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtggtg 44290871  T
Q  180 tctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    | |||||  |  | | ||||||||||||||||||||| ||||||    
T  44290870 tatctcttgcttgtgcggttgttctagcctcgatgtggacggtc 44290827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 11977293 - 11977435
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || | ||||| |||||| ||||||||  |||||||||| || ||| ||||| | | | |||||||||||| |||||||||||| |||    
T  11977293 tatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagtgtgatgt 11977392  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |||| | ||||||||||||||||||||| ||||||    
T  11977393 ctctcttgcaagtgcggttgttctagcctcgatgtggacggtc 11977435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 14318896 - 14319022
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| | |||  ||||||| ||| |||||||||||| |||||||||||||||||||||| |   | | |    
T  14318896 gataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctcttatttgtgcg 14318995  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||| ||||| ||||||    
T  14318996 gttgttctagcctcaatgtggacggtc 14319022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 34649451 - 34649593
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  ||||||||  ||| ||  ||||| | | | |||||||||||| |||||||||| || ||    
T  34649451 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaagagtgaggcgt 34649550  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  | || ||||||||||||||||||||||| ||||||    
T  34649551 ctctcttgctagtgtggttgttctagcctcgatgtggacggtc 34649593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 48588617 - 48588491
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| | |||   ||||| |||| |||||||||||| |||||||||| ||||||||||| ||  | | |    
T  48588617 gataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctctcttacttgtgcg 48588518  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  48588517 gttgttctagcctcgatgtggacggtc 48588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 26662043 - 26661938
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||  ||||||||||||||||||||||||||  |||||||| | | |||  ||||| | ||| |||||||||||| ||||||||||||||||    
T  26662043 tatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaagagtgtggtgt 26661944  T
Q  181 ctctct 186  Q
    ||||||    
T  26661943 ctctct 26661938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 38804483 - 38804370
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    |||||||||||||||||||||| ||||||||||| ||||   ||||| |||| ||||||||||||| ||||||||||| ||||||||||  |  | | ||    
T  38804483 ataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgtagtgtctctcttgcttgtgcgg 38804384  T
Q  198 ttgttctagcctcg 211  Q
    ||||||||||||||    
T  38804383 ttgttctagcctcg 38804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 37556144 - 37556259
Alignment:
Q  100 aaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggtt 199  Q
    |||| |||||||||||||||| |||||||||| |||||  ||||| ||||  |||||||||||| ||||||||||||||||||||||  |  | ||||||    
T  37556144 aaaatagtaaaggttgaacatcttataagtaagaggacc-ataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtggtt 37556242  T
Q  200 gttctagcctcgatgtg 216  Q
    |||| ||||||||||||    
T  37556243 gttcaagcctcgatgtg 37556259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 228
Target Start/End: Original strand, 41759512 - 41759643
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  |||||||||| | ||   ||||||||||| |||||||||||| ||||||||||||||||||||||  |    |||    
T  41759512 gataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtg 41759611  T
Q  197 gttgttctagcctcgatgtgaacggtctccga 228  Q
    ||||||||||||| |||||| |||||| ||||    
T  41759612 gttgttctagccttgatgtggacggtccccga 41759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 5575117 - 5575223
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| ||||||||||||||||||  |||||||||| ||||| |||||||||||  | |||||||||| | ||||||||||| ||    
T  5575117 tatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagtgtggcgt 5575216  T
Q  181 ctctctc 187  Q
    |||||||    
T  5575217 ctctctc 5575223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 32594861 - 32594756
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| ||| || |||||||||| |||||||||||||||  |||||||||| |||||  |||||  ||||  ||||||||||| ||||||||||||||||    
T  32594861 tatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtaagagtgtggtgt 32594762  T
Q  181 ctctct 186  Q
    ||||||    
T  32594761 ctctct 32594756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 37555749 - 37555877
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || ||||||| ||| ||||||||| | ||||||||||| ||||| | ||||||| |  |||||||||||| ||||||||||||||||||||||    
T  37555749 tcccacatcggataaaatagtgaaggttgaatacattataagtaagaggacct-taaatccttagccttaaggttttgggtaagagtgtggtgtctctct 37555847  T
Q  187 cacaagcgtggttgttctagcctcgatgtg 216  Q
      |  | |||||||||| ||||||||||||    
T  37555848 tgcttgtgtggttgttcaagcctcgatgtg 37555877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 50052168 - 50052063
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||| |||||||||| |||||  ||||| | |||  ||||| ||||| ||||||||||||||||    
T  50052168 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaagttttgggtaagagtgtggtgt 50052069  T
Q  181 ctctct 186  Q
    ||||||    
T  50052068 ctctct 50052063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 9955920 - 9956064
Alignment:
Q  81 tatatatcccacctcagataaaaga-gtaaaggttgaacatattataagtaaaaggacttataaatcca-ttaccttaaggttttaggtaagagtgtggt 178  Q
    ||||| |||||| |||||||||| | |||||||||||||| ||||||||||| |||||  || || ||| || |||||||||||| |||||||||||| |    
T  9955920 tatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaagagtgtgat 9956019  T
Q  179 gtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||  |  | | ||||| |||||||||||||||| |||||    
T  9956020 gtctctcttgcttgtgcggttgctctagcctcgatgtgagcggtc 9956064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 40082436 - 40082554
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||| | |||||| |||| |||||||||||| |||||||||||||| |||||||  |  | | |    
T  40082436 gataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaaggttttgggtaagagtgtggtatctctcttgcttgtgcg 40082534  T
Q  197 gttgttctagcctcgatgtg 216  Q
     |||||||||||||||||||    
T  40082535 tttgttctagcctcgatgtg 40082554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 34364954 - 34365044
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||||| | |||||||||||||  |||||||||| |||||  ||||| ||||  |||||||||||| |||||||||||||||||||||||    
T  34364954 gataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctc 34365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 11977028 - 11977099
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||| ||||||||||||||||||||||  |||| | ||| ||||||||||||||||| ||||||    
T  11977028 ccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtc 11977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 5528883 - 5528794
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||||||||||||||| |||||| ||| |||||| |||||  ||||  ||||||||||| |||||  |||||| ||||||||    
T  5528883 gataaaagagtaaaggttgaacatcttataaataagaggactcataaactcattttcttaaggttttgggtaaatgtgtggcgtctctct 5528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 39066345 - 39066209
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||||| |||| || |||| || |||||||||||||||  |||||| ||| | |||  |||||  ||||  ||||||||||| | ||||||||||||||    
T  39066345 tatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttggataagagtgtggtgt 39066246  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtga 217  Q
    |||||| ||    |||||||||||||||| |||||||    
T  39066245 ctctcttacttatgtggttgttctagccttgatgtga 39066209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 34364536 - 34364655
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| ||||    |||| ||||  |||||||||||| |||||||||||| |||||||||| |    | |    
T  34364536 gataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggtaagagtgtgatgtctctctcgcttatgcg 34364635  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||| |||||||||||||||    
T  34364636 gttgctctagcctcgatgtg 34364655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 31767290 - 31767164
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  || || | | | |||||||||||| ||||||||||||  |||| |||  |  | |||    
T  31767290 gataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggtaagagtgtgacgtctatcttgcttgtgtg 31767191  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||| ||||||||| ||||||    
T  31767190 gttgttctagactcgatgtggacggtc 31767164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 22077616 - 22077532
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcac 189  Q
    |||||||||||||||  |||||||||| |||||  |||||  | |  |||||||||||| ||||||||||||| |||||||||||    
T  22077616 agtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtgtggcgtctctctcac 22077532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 24132043 - 24131999
Alignment:
Q  171 agtgtggtgtctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  24132043 agtgtggtgtctctctcactagtgtggttgttctagcctcgatgt 24131999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 37850745 - 37850603
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  |||||| |||| ||||||||||  |||||||||| || ||  ||||| | | |   |||||||||  | ||||||||||||||    
T  37850745 tatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggataagagtgtggtgt 37850646  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||  | | ||||| ||||||||||||||| ||||||    
T  37850645 ctctctcacttgtgcggttgctctagcctcgatgtggacggtc 37850603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 41184554 - 41184489
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttt 162  Q
    ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||    
T  41184554 gataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 44043893 - 44043812
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| ||||||||  |||||||||| | |||  ||||| |||||  |||||| |||| ||||||||||||||||||||||    
T  44043893 agtaaatgttgaacaccttataagtaagatgacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctct 44043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 32168784 - 32168708
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||| ||||| |||| ||||||| ||||||||||||| ||||||||  |  | | |||||||||||||||||||||    
T  32168784 ataaacccattgccttgaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtg 32168708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 5320086 - 5319955
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||| ||||||||  |||||||| | |||||  |||||  |||  |||||||||||| ||||||||||| ||||||||||  |    |||||||||||    
T  5320086 agtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggtaagagtgtagtgtctctcttgcttatgtggttgttct 5319987  T
Q  205 agcctcgatgtgaacggtctccgaactccctt 236  Q
    |||||| ||||  |||||| || | |||||||    
T  5319986 agcctcaatgtagacggtccccaagctccctt 5319955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 12466367 - 12466402
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||||||||||| |||||||||||||||||||||||    
T  12466367 ccttaaggtttttggtaagagtgtggtgtctctctc 12466402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 22077231 - 22077113
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    ||||||||||||| |  |||||||||| |||||  |||||  |||| || ||||||||| | ||||||||||  ||||| |||||    | ||||||||     
T  22077231 agtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctccctcacttatgcggttgttca 22077132  T
Q  205 agcctcgatgtgaacggtc 223  Q
    |||||||||||| ||||||    
T  22077131 agcctcgatgtggacggtc 22077113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 45084395 - 45084531
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||   | |   ||||||||||| |||||||| |||||||    
T  45084395 tatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa---cgt---cttaaggttttgggtaagagagtggtgt 45084488  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | |||||||||| |||||||| | ||||||    
T  45084489 ctctcttgcttgtgcggttgttctaacctcgatgcggacggtc 45084531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 50051774 - 50051728
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||| |||||| |||||||||||  |||||||||||||||||||||    
T  50051774 ataaacccattatcttaaggttttgcgtaagagtgtggtgtctctct 50051728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 3537292 - 3537236
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggac 137  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||    
T  3537292 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 3537236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 19283529 - 19283465
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||||||| | ||||||||||| |||||||||||  | | ||||| |||||||| ||||||    
T  19283529 ccttaaggttttggataagagtgtggcgtctctctcacttgtgcggttgctctagcctggatgtg 19283465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 22077947 - 22077832
Alignment:
Q  107 taaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctag 206  Q
    |||||||||||||| |||||||||| |||||  |||||  || || | ||||||||  ||||||||||||| |||||| ||||    | |||||||| ||    
T  22077947 taaaggttgaacatcttataagtaagaggacccataaactca-tagcctaaggtttggggtaagagtgtggcgtctctttcacttatgcggttgttcaag 22077849  T
Q  207 cctcgatgtgaacggtc 223  Q
    | |||||||| ||||||    
T  22077848 catcgatgtggacggtc 22077832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 26074641 - 26074760
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||||||||||| || |||    
T  26074641 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtg 26074740  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||| |||| ||||||||||    
T  26074741 gttgctctaacctcgatgtg 26074760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 36492362 - 36492220
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  |||||||||| |||||  |||||  ||||||||| ||||||| | ||||||||||||||    
T  36492362 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttggataagagtgtggtgt 36492263  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||||||||||||| ||||||    
T  36492262 ctctcttgcttgtgtggttgttctagcctcgatgtggacggtc 36492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 6500479 - 6500605
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| ||||| | |||| ||||| |||||||||||| ||||||||||||||||||||||  |  | | |    
T  6500479 gataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcg 6500578  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  6500579 gttgttctagcctcgatgtggacggtc 6500605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 18603265 - 18603124
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| |||||||||||||  |    
T  18603265 tatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcat 18603166  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    ||||||  |  | ||||| ||||||||||||||||| |||||    
T  18603165 ctctcttgcttgtgtggtagttctagcctcgatgtggacggt 18603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 35150020 - 35150154
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||||||| |||||||||||  |||||||||| || ||  |||||||||||  ||||||||||| ||||| ||||||||||    
T  35150020 tatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaagag-acccataaatccattgtcttaaggttttgggtaaaagtgtggtgt 35150118  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||||| || |||||||||||| |||| |||||    
T  35150119 ctctctcactagtgtggttgttctaacctcaatgtg 35150154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 1028662 - 1028520
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||||| ||||||  |||||||||| |||||  ||||| | || ||||||||||||| ||||||||||||| ||    
T  1028662 tatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaagagtgtggcgt 1028563  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||  | | ||||||||||||||||||||| ||||||    
T  1028562 ctctctcacttgtgcggttgttctagcctcgatgtggacggtc 1028520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 15370112 - 15370254
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  |||||| |||||||||||||||| |||||||||| |||||  |||||||||   |||||||||||| ||||||||||||||||    
T  15370112 tatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggtaagagtgtggtgt 15370211  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | | ||||||||||||||||||| ||||||    
T  15370212 ctctcttgcttgtgggattgttctagcctcgatgtggacggtc 15370254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 25327964 - 25328090
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  |||||||||| |||||  ||||| | | | |||||||||||| ||||||||||||||||||||||  |||| |||    
T  25327964 gataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgtg 25328063  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||| ||||| ||||||    
T  25328064 gttgttctagcctcaatgtggacggtc 25328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 40296460 - 40296318
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| || ||||||||||||  |||||||||| |||||  ||||| ||||| |||| ||||||| ||||||||||||||||    
T  40296460 tatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggtaagagtgtggtgt 40296361  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||||||||| ||||||    
T  40296360 ctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 40296318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 41170647 - 41170777
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||| |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  41170647 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 41170746  T
Q  181 ctctctcacaagcgtggttgttctagcctcg 211  Q
     | |||  |  | ||||||||||||||||||    
T  41170747 ttttcttgcttgtgtggttgttctagcctcg 41170777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 624226 - 624350
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    |||||| |||||||||||||||  |||||||||| | |||  ||||| ||||  |||| ||||||| |||||||||||||||||||||||||  | | ||    
T  624226 ataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctctcacttgtgggg 624325  T
Q  198 ttgttctagcctcgatgtgaacggt 222  Q
    ||||||||||||||||||| |||||    
T  624326 ttgttctagcctcgatgtggacggt 624350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 26075291 - 26075171
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggt-aagagtgtggtgtctctctcacaagcgt 195  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||| |||||||||  ||||||||  |||| ||    
T  26075291 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtgtcgtctctcttgcaagtgt 26075192  T
Q  196 ggttgttctagcctcgatgtg 216  Q
    ||||||| |||||||||||||    
T  26075191 ggttgttttagcctcgatgtg 26075171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 26074275 - 26074156
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  | ||| |||| |||||  || || ||||| |||||||||||| ||||||||||||||||||||||||| || |||    
T  26074275 gataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactagtgtg 26074176  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||| |||| ||||||||||    
T  26074175 gttgctctaacctcgatgtg 26074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 35167979 - 35167848
Alignment:
Q  85 tatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||  | |||  ||||||| ||| |||| | ||||| |||||||||||| |||||||    
T  35167979 tatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgtgatgtctct 35167880  T
Q  185 ctcacaagcgtggttgttctagcctcgatgtg 216  Q
    | ||| || |||||||||||||| ||||||||    
T  35167879 cacactagtgtggttgttctagcatcgatgtg 35167848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 3295473 - 3295348
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  ||||| | ||| |||||||||||| |||||||||||| |||||||||  |  | |||    
T  3295473 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggtttt-ggtaagagtgtgttgtctctcttgcttgtgtg 3295375  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  3295374 gttgttctagcctcgatgtggacggtc 3295348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 6500851 - 6500977
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||| |||||||||  |||||  |||| |||||||||||| | |||||||||||||||||||| ||  | | |    
T  6500851 gataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggataagagtgtggtgtctctcttacttgtgcg 6500950  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||| |||||||||||||||| ||||||    
T  6500951 gttattctagcctcgatgtggacggtc 6500977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 13415905 - 13415774
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||  |||||||||||||||  |||||||||| |||||  ||||| | |||||||||||||||| ||||||||||||| ||    
T  13415905 tatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgggtaagagtgtggcgt 13415806  T
Q  181 ctctctcacaagcgtggttgttctagcctcga 212  Q
    ||||||  |  | | |||||||||||||||||    
T  13415805 ctctcttgcttgtgcggttgttctagcctcga 13415774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 26591031 - 26590920
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||||||| ||||   |||||| || | ||||||||||||  |||||||||||| ||||||||||| || |||||||||||    
T  26591031 agtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagtgtggcgtctctctcactagtgtggttgttct 26590932  T
Q  205 agcctcgatgtg 216  Q
    | ||||||||||    
T  26590931 aacctcgatgtg 26590920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 9498799 - 9498694
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| || ||| ||||||| || |||||||||||||||  |||||||||| |||||  ||||| ||||| ||||||| |||| ||||||||||||||||    
T  9498799 tatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgt 9498700  T
Q  181 ctctct 186  Q
    ||||||    
T  9498699 ctctct 9498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 3295160 - 3295025
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| | |||  ||||| ||||| |||| ||||||| |||| |||||||||||    
T  3295160 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgt 3295061  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||     | ||||||||| |||||||||||||    
T  3295060 ctctcttggttgtgtggttgttgtagcctcgatgtg 3295025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 42405725 - 42405638
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    ||||||| |||||||||||||||  ||| ||||||||||||| ||||| | | | |||||||||||| ||||||||||||||||||||    
T  42405725 gataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaagagtgtggtgtctct 42405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 6224209 - 6224307
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtg 179  Q
    ||||| |||||| || |||||||||||||||||||||||  |||||||||| |||||  |||||  |||  |||||||||||| |||||||||||||||    
T  6224209 tatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaagagtgtggtg 6224307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 27502165 - 27502039
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||| ||||  |||||||||| |||||  ||||| | ||| ||||||| |||| ||||| ||||||||||||||||  |  | |||    
T  27502165 gataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttttggtaaaagtgtggtgtctctcttgcttgtgtg 27502066  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||| |||||||||| ||||||    
T  27502065 gttgttctatcctcgatgtggacggtc 27502039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 36522351 - 36522274
Alignment:
Q  112 gttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcac 189  Q
    ||||||||| |||||||| | |||||  ||||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  36522351 gttgaacattttataagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctctcac 36522274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 12662797 - 12662662
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||| |||||||||| |  ||  |||||||||||  |||||| |||| |||||||||||||||     
T  12662797 tatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttgggtaagagtgtggtgc 12662698  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    || |||  |  | | |||| ||||||||||||||||    
T  12662697 ctttcttgcttgtggggttcttctagcctcgatgtg 12662662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 32487407 - 32487541
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  | |||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||  ||    
T  32487407 tatatgtcccacatcggataaaatagtaaaggttgaacacct-ataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgacgt 32487505  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
     |||||  |    |||||||||||||||||||||||    
T  32487506 atctcttgcttatgtggttgttctagcctcgatgtg 32487541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 300972 - 301118
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| ||||||||||||| |  |||||||||| ||        |||||||| ||||||| |||| ||||||||||||||||    
T  300972 tatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag--------aatccattgccttaagatttttggtaagagtgtggtgt 301063  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt-ctccgaactccc 234  Q
    ||||||  |  | |||| ||||| || ||||| ||||||||| ||||||||||||    
T  301064 ctctcttgcttgtgtggctgttcaagtctcgacgtgaacggtcctccgaactccc 301118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 34753146 - 34753029
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||| ||||||||  |||||||||| | |||  ||||| | ||| |||||||||||| ||||||||||||| ||||||||  |  | | |||||||||    
T  34753146 agtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcggttgttct 34753047  T
Q  205 agcctcgatgtgaacggt 222  Q
    |||||||||||| |||||    
T  34753046 agcctcgatgtggacggt 34753029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 26074927 - 26074807
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggt-aagagtgtggtg 179  Q
    ||||| |||||| || ||||||||||||||||||||||| | ||||||||  |||||  ||||| | |||  ||||||||||| ||| |||||||||| |    
T  26074927 tatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaaagagtgtggcg 26074828  T
Q  180 tctctctcacaagcgtggttg 200  Q
    |||||||  |||| |||||||    
T  26074827 tctctcttgcaagtgtggttg 26074807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 42435502 - 42435582
Alignment:
Q  143 aatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||| ||||||||||||||||   | |||||||| ||||||||||| ||| |||||||||||||| |||||||| ||||||    
T  42435502 aatctattaccttaaggttttgaatcagagtgtgatgtctctctcataagtgtggttgttctagcatcgatgtggacggtc 42435582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 38427585 - 38427695
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||| ||||||||| | ||||  || ||||||||  |||||||||||  |||||||||||  |||||||||||  | | |||||||||    
T  38427585 agtaaaggttgaacatcttataagtaga-ggacccattaatccattgtcttaaggttttgtgtaagagtgtgacgtctctctcacttgtgcggttgttct 38427683  T
Q  205 agcctcgatgtg 216  Q
    | ||||||||||    
T  38427684 aacctcgatgtg 38427695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 15370439 - 15370557
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||| ||||||||  |||||||||| |||||  ||||| ||||  ||||||||||||  |||||||||||| ||||||||     | | |||||||||    
T  15370439 agtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctcttgtttgtggggttgttct 15370538  T
Q  205 agcctcgatgtgaacggtc 223  Q
    |||||||||||| ||||||    
T  15370539 agcctcgatgtggacggtc 15370557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 41632819 - 41632937
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||||||| |||||  ||||| ||| | | ||||| |||| ||||||||||||||||||||||  |  | | ||||||| |    
T  41632819 agtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggtaagagtgtggtgtctctcttgcttgtgcggttgtttt 41632918  T
Q  205 agcctcgatgtgaacggtc 223  Q
    || ||||||||| ||||||    
T  41632919 agtctcgatgtggacggtc 41632937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 42508625 - 42508707
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggtttt 163  Q
    |||||||||||| || |||| || |||||||||| ||||| | |||||||| |||||| ||||| ||||| ||||||||||||    
T  42508625 tatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaaggtttt 42508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 11417106 - 11417017
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||| |||||||||||||||  |||||||||| ||||   ||||| ||||| ||||||||||||  ||||||||||| | |||||||    
T  11417106 gataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtgtgatctctctct 11417017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 29549387 - 29549295
Alignment:
Q  94 tcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||| |||||||| ||||||   ||||||||| | |||  |||||  ||||||||||||||||| | ||||||||||| ||||||||    
T  29549387 tcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttggataagagtgtggcgtctctct 29549295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 36568712 - 36568579
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||| ||||||||  |||||||| | | |||   |||| ||||| |||||||||||| ||||||||||||| ||    
T  36568712 tatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggtaagagtgtggcgt 36568613  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | |||||||||||| ||||||||||    
T  36568612 ctctct--cttgtgtggttgttctatcctcgatgtg 36568579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 299502 - 299605
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| | |||  |||||  |||  ||||||||||||  |||||||||||| ||    
T  299502 tatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgtaagagtgtggcgt 299601  T
Q  181 ctct 184  Q
    ||||    
T  299602 ctct 299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 623902 - 623965
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    ||||||||||||  ||||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  623902 ccttaaggttttgagtaagagtgtggtgtctctctcacttgtggggttgttctagcctcaatgt 623965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 186
Target Start/End: Complemental strand, 795306 - 795272
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||||||||||||||||||||||||||    
T  795306 ccttaaggttttaggtaagagtgtggtgtctctct 795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 41635323 - 41635233
Alignment:
Q  94 tcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    ||||||||||||||||| ||||||||  |||||| ||| ||||   |||||||||||  |||||  |||||||||||||||| || |||||    
T  41635323 tcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccattgtcttaaaattttaggtaagagtgtagtatctct 41635233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 33747784 - 33747889
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||| || |  |||||||||| ||||   |||||  |||| ||||||| |||| | ||||||||||||||    
T  33747784 tatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtgt 33747883  T
Q  181 ctctct 186  Q
    ||||||    
T  33747884 ctctct 33747889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 6225057 - 6225104
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataag 128  Q
    |||||||||||| |||||||||||| |||||||||||||  |||||||    
T  6225057 tatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 13042611 - 13042658
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  13042611 ataaacccattgccttaaggttttggataagagtgtggtgtctctctc 13042658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 35914878 - 35914912
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaa 131  Q
    |||||||||||||||||||||||| ||||||||||    
T  35914878 gataaaagagtaaaggttgaacattttataagtaa 35914912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 13785732 - 13785671
Alignment:
Q  126 aagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||||| ||||  |||||| |||| |||||||||||||| |||| |||||||||| ||||||    
T  13785732 aagtaataggatctataaacccataaccttaaggttttaagtaaaagtgtggtgtttctctc 13785671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 26900089 - 26900020
Alignment:
Q  154 ttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||| ||||||||||||||||||||||  |  | | | |||||||||||| |||||| ||||||    
T  26900089 ttaaggttttgggtaagagtgtggtgtctctcttgcttgtgggtttgttctagccttgatgtggacggtc 26900020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 7768863 - 7768919
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggac 137  Q
    ||||||||| || || ||||||| | |||||||||||||  ||||||||||||||||    
T  7768863 tatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggac 7768919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 6422129 - 6422258
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| |||||||||| ||||||||||||||| ||||||| ||| |||||  ||||| ||||  |||||||||||||||||||||||||||||||||||    
T  6422129 tcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctct 6422228  T
Q  187 cacaagcgtggttgttctagcctcgatgtg 216  Q
      |  | |||||||||||||||||||||||    
T  6422229 tgcttgtgtggttgttctagcctcgatgtg 6422258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 14745796 - 14745677
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||| ||||||||  |||| |||    
T  14745796 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcaagtgtg 14745697  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  14745696 gttgttctagcctcgatgtg 14745677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 36178750 - 36178615
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  36178750 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 36178651  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | ||||||||||||||||| |||||    
T  36178650 ctctcttgcttgtgtggttgttctagcctctatgtg 36178615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 6421398 - 6421540
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  |||||||||| |||||| |||||  |||| |||| ||||||| ||||||||||||||||    
T  6421398 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaagagtgtggtgt 6421497  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||| ||||||||| ||||||    
T  6421498 ctctcttgcttgtgcggttgttctagtctcgatgtggacggtc 6421540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 37632726 - 37632602
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||||||  |||| |||||||||| |||||  ||||| |||| || |||||||||| |||||||||||||||| ||||| ||||| |||    
T  37632726 gataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttgggtaagagtgtggtgtatctcttacaagtgtg 37632627  T
Q  197 gttgttctagcctcgatgtgaacgg 221  Q
     ||||||||||||||||||| ||||    
T  37632626 attgttctagcctcgatgtggacgg 37632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 37106201 - 37106343
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  37106201 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggtaagagtgtggtgt 37106300  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
     |||||  |  | | | ||||||||||||||||||| ||||||    
T  37106301 ttctcttgcttgtgcgattgttctagcctcgatgtggacggtc 37106343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 234
Target Start/End: Complemental strand, 15511624 - 15511487
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| |||||  |||||| |||| ||||||||||||||||||||||  |  | |||    
T  15511624 gataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttgcttgtgtg 15511525  T
Q  197 gttgttctagcctcgatgtgaacggtctccgaactccc 234  Q
    |||||||||| ||||||||| ||| || |||| |||||    
T  15511524 gttgttctagtctcgatgtggacgatccccgagctccc 15511487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 15880292 - 15880411
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||| ||||||||  |  | | |    
T  15880292 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcg 15880391  T
Q  197 gttgttctagcctcgatgtg 216  Q
    |||||| |||||||||||||    
T  15880392 gttgttttagcctcgatgtg 15880411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 962611 - 962765
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||||||||||||  |||||||| | |||||  ||||| |||||  ||||||||||| |||||||||||| |||    
T  962611 tatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggtaagagtgtgttgt 962710  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtct-ccgaactccc 234  Q
    | ||||  |  | ||||||||||||||||||||||| ||||||| ||||||||||    
T  962711 cactcttgcttgtgtggttgttctagcctcgatgtggacggtctcccgaactccc 962765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 28254382 - 28254276
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||||||||||||| |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||||||    
T  28254382 tatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgt 28254283  T
Q  181 ctctctc 187  Q
    |||||||    
T  28254282 ctctctc 28254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 41283604 - 41283478
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  |||||  |||| |||||||||||||||||||||||||| ||||||||     | |||    
T  41283604 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggtaagagtgtggcgtctctcttgtttgtgtg 41283505  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||||| |||||| ||||||    
T  41283504 gttgttctagccttgatgtggacggtc 41283478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 42514662 - 42514804
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| ||| || ||||||| || |||||||||||||||  |||||||||| |||||  ||||| ||||  ||||||| |||| ||||||||||||| ||    
T  42514662 tatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggtaagagtgtggcgt 42514761  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||  | | ||||||||||||||||||||| ||||||    
T  42514762 ctctcttacttgtggggttgttctagcctcgatgtggacggtc 42514804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 7598622 - 7598754
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  |||||||||| |||||        |||| ||||||| ||||| ||||||||||||||||    
T  7598622 tatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggac--------ccataaccttaacgtttttggtaagagtgtggtgt 7598713  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacgg 221  Q
    |||||||||  | |||||||||| ||| |||||||| ||||    
T  7598714 ctctctcacttgtgtggttgttcaagcatcgatgtggacgg 7598754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 33731661 - 33731803
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||| ||| || |||||||||||||||||||| ||  |||||||||| ||||   ||||| | ||| |||||||||||| ||||||||| ||||||    
T  33731661 tatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagtatggtgt 33731760  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |    | |||||||||||||||||||| |||||||    
T  33731761 ctctcttgcttatgcggttgttctagcctcgatgtaaacggtc 33731803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 5542753 - 5542628
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    |||||| |||||||||||||||  |||||||||| |||||  ||||| | ||| |||||||||||| ||||||||||||||||||||||  |  | | ||    
T  5542753 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctcttgcttgtgcgg 5542654  T
Q  198 ttgttctagcctcgatgtgaacggtc 223  Q
    |||||| || ||||||||| ||||||    
T  5542653 ttgttcaagtctcgatgtggacggtc 5542628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 14745439 - 14745303
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  |||||| ||||| |||||||||| || ||||||  |||||  ||||| ||||| |||||||||||| ||||||||||||| ||    
T  14745439 tatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggtaagagtgtggcgt 14745340  T
Q  181 ctctctcacaag-cgtggttgttctagcctcgatgtg 216  Q
    ||||||   |||  |||||||||||||||||||||||    
T  14745339 ctctcttgtaagtggtggttgttctagcctcgatgtg 14745303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 40733530 - 40733665
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||| ||||||||  |||||||||| |||||  ||||| | |  ||||||| ||||| ||||||||||||||||    
T  40733530 tatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgt 40733629  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||| |  | ||||| |||| || |||||||||    
T  40733630 ctctctcgcttgtgtggtagttcaagtctcgatgtg 40733665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 37105937 - 37106079
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  |||||| |||||||||||||||  ||||||||||  ||||  |||||  |||| ||||||| |||| ||||||||||||||||    
T  37105937 tatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggtaagagtgtggtgt 37106036  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  |   ||||||||||||||||||||| ||||||    
T  37106037 ctctcttgcttgtacggttgttctagcctcgatgtggacggtc 37106079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 5543143 - 5543002
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| ||||   ||||| | ||| ||||||| |||| ||||||||||||||||    
T  5543143 tatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggtaagagtgtggtgt 5543044  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    |||| |  |  | | |||||||| |||||||||||| |||||    
T  5543043 ctctattgcttgtgcggttgttcaagcctcgatgtggacggt 5543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 36178310 - 36178182
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || ||||||| |||||||||||||||  ||||||||||  | ||  ||||| ||||| ||||||| |||| ||||||||||||||| ||||||    
T  36178310 tcccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctct 36178211  T
Q  187 cacaagcgtggttgttctagcctcgatgt 215  Q
      |  | ||||||||| ||||||||||||    
T  36178210 tgcttgtgtggttgttatagcctcgatgt 36178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 6421815 - 6421886
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||| |||||||||||||||||||||| ||  | ||||||||||| ||||||||||| ||||||    
T  6421815 ccttaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtc 6421886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 7598265 - 7598383
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||| ||||  |||||| ||| |||||  |||||  |||  |||||||||||| ||||||| | |||||||||||||||  | | ||||||||     
T  7598265 agtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgggtaagaatatggtgtctctctcacttgtgcggttgttca 7598364  T
Q  205 agcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||    
T  7598365 agcctcgatgtgaacggtc 7598383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 3672756 - 3672855
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacgg 221  Q
    |||||||||||||  || ||||| ||||| ||||||| |||| |||||||||||||||||||||| |   | ||||||||||||| ||||||||| ||||    
T  3672756 ttataagtaaaagatct-ataaacccattgccttaagattttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggacgg 3672854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 36006001 - 36005881
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||| ||||||||  |||||||||| |||||  |||||  |||| |||||||||||| ||||| ||||||| ||||||||  |  | | |||||||||    
T  36006001 agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaaagtgtggcgtctctcttgcttgtggggttgttct 36005902  T
Q  205 agcctcgatgtgaacggtctc 225  Q
    |||||||||||| || |||||    
T  36005901 agcctcgatgtggacagtctc 36005881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 31259745 - 31259658
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    |||||||||||||||||| ||||  |||||||||| | |||  ||||| | || ||||||||||||| |||||||||||||| |||||    
T  31259745 gataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaagagtgtggtatctct 31259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 16542468 - 16542570
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| || ||||||| |||||||||||||||  |||||| ||| ||||||||||||  |||| ||||||| ||||  |||||||||| |  |||||||    
T  16542468 tcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagattttgagtaagagtgtagcatctctct 16542567  T
Q  187 cac 189  Q
    |||    
T  16542568 cac 16542570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 35580868 - 35580727
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| | |||| ||||||||  |||||||| | |||||  ||||| ||||| |||||||||||| |||||||||| || ||    
T  35580868 tatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagaggacc-ataaacccattgccttaaggttttgggtaagagtgcggcgt 35580770  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||     | | ||||||||||||||||||||| ||||||    
T  35580769 ctctcttgtttgtggggttgttctagcctcgatgtggacggtc 35580727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 36178414 - 36178320
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgt 175  Q
    ||||| |||||| || ||||||| ||||||||| |||||  ||||||||||  ||||| ||||| |||||  ||||||||||| |||||||||||    
T  36178414 tatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaaggttttgggtaagagtgt 36178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 223
Target Start/End: Complemental strand, 40679750 - 40679632
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    ||||| |||||||||  |||||||||| || ||  ||||| ||||  ||||||| |||| ||||||||||||| |||||||| ||  | | |||||||||    
T  40679750 agtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctcttacttgtggggttgttct 40679651  T
Q  205 agcctcgatgtgaacggtc 223  Q
    || ||||||||| ||||||    
T  40679650 agtctcgatgtggacggtc 40679632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 3673154 - 3673223
Alignment:
Q  154 ttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||| |||| | |||||||||| ||||||||| || || ||||||||||||||||||||||| ||||||    
T  3673154 ttaagattttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacggtc 3673223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 1769921 - 1770044
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||| ||||||||  |||||||||| |||||| |||||  |||  | || | | |||   ||||||||||||||||||||  |  | | |    
T  1769921 gataaaagagtaaaagttgaacaccttataagtaagaggactcataaactcatagctttgaagctttgaataagagtgtggtgtctctcttgcttgtgag 1770020  T
Q  197 gttgttctagcctcgatgtgaacg 220  Q
    ||||||||||||||||||||||||    
T  1770021 gttgttctagcctcgatgtgaacg 1770044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 28531459 - 28531352
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || || ||||||||||||  |||||||||| ||| |  |||||  |||| ||||||| |||| |||||||||||||||     
T  28531459 tatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggtaagagtgtggtga 28531360  T
Q  181 ctctctca 188  Q
    ||||||||    
T  28531359 ctctctca 28531352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 6421714 - 6421780
Alignment:
Q  156 aaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    |||||||| |||||||||||||||||||||| ||  | ||||||||||  ||||||||||| |||||    
T  6421714 aaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttccggcctcgatgtggacggt 6421780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 29873676 - 29873574
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| ||||||| || |||  ||||||||||| ||||||||   |||||| |||||  |||| ||||||||||||  |||||||||||  ||||||||    
T  29873676 tcccacatcagatagaaaagtggaggttgaacattttataagtgggaggactcataaactcattgccttaaggttttgagtaagagtgtgacgtctctct 29873577  T
Q  187 cac 189  Q
    |||    
T  29873576 cac 29873574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 38796765 - 38796629
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagag--tgtggt 178  Q
    ||||| |||||| || ||||||| | |||||||||||||  |||||||||| |||||  ||||| | | | |||||||||||| ||||||||  |||||     
T  38796765 tatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtatgtggc 38796666  T
Q  179 gtctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    |||||| |  |  | |||||||||| |||||||||||    
T  38796665 gtctctattgcttgtgtggttgttcaagcctcgatgt 38796629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 6713005 - 6713132
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttagg-taagagtgtggtgtctctctcacaagcgt 195  Q
    ||||||| |||||| ||||||||  |||||||||| |||||  ||||| | ||| | |||||||||| || |||||||||| |||||||||  |    |     
T  6713005 gataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctcttgcttatgg 6713104  T
Q  196 ggttgttctagcctcgatgtgaacggtc 223  Q
    | ||||||||||||||||||| ||||||    
T  6713105 gattgttctagcctcgatgtggacggtc 6713132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 23346320 - 23346391
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||| |||||||||||| |||||||||  |  | | |||||||||||||| |||||| ||||||    
T  23346320 ccttaaggttttcggtaagagtgtgatgtctctcttgcttgtgcggttgttctagcctagatgtggacggtc 23346391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 30323506 - 30323581
Alignment:
Q  110 aggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctc 185  Q
    ||||||||||  ||| |||| | ||||| ||||||  |||| |||||||||||| ||||||||||||| |||||||    
T  30323506 aggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgggtaagagtgtggcgtctctc 30323581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 37895206 - 37895107
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || | |||| |||||| |  ||| ||||||||| ||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  37895206 tatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttgggtaagagtgtggtgt 37895107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 40733966 - 40734037
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||||| |||||||||||||||||| |||| |  | |||||||||| || ||||||||| ||||||    
T  40733966 ccttaaagttttgggtaagagtgtggtgtctgtctcgcttgtgtggttgttcaagtctcgatgtggacggtc 40734037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 12910265 - 12910335
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgt 175  Q
    |||| |||||||||   |||||||| ||| ||||||||||| ||||  ||||||||||| |||||||||||    
T  12910265 agtacaggttgaaccccttataagtgaaatgacttataaattcattgtcttaaggttttgggtaagagtgt 12910335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 28226422 - 28226456
Alignment:
Q  153 cttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||| ||||||||||||||||||||||||||||||    
T  28226422 cttagggttttaggtaagagtgtggtgtctctctc 28226456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 29676980 - 29677026
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  29676980 ataaacccattgccttaaggctttaagtaagagtgtggtgtctctct 29677026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 31468891 - 31468800
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtg 176  Q
    ||||| |||||| || ||||||| ||||||||||||| || |||||||    |||||  |||||  |||| |||||||||||| ||||||||||||    
T  31468891 tatatgtcccacatcggataaaatagtaaaggttgaatatcttataag----aggacccataaactcattgccttaaggttttgggtaagagtgtg 31468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 37894796 - 37894731
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||||||||| | |||| ||||||||||| ||||||| |||| | ||| |||||||||| ||||||    
T  37894796 ttataagtaagaagactcataaatccattgccttaagattttggttaaaagtgtggtgtgtctctc 37894731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 40163444 - 40163383
Alignment:
Q  154 ttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    |||||||||| ||||| ||||||||||||||||  |  | |||||||||||| |||||||||    
T  40163444 ttaaggttttgggtaaaagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgt 40163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 3038435 - 3038280
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  ||||||||||||||||  ||||| ||||| |||||||||||| |||||||||||||  |    
T  3038435 tatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaagagtgtggcat 3038336  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt-ctccgaactccct 235  Q
    ||||||  |  | ||||||||||||||||||||||| ||||| |||||| ||||||    
T  3038335 ctctcttgcttgtgtggttgttctagcctcgatgtggacggtcctccgagctccct 3038280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 3669700 - 3669835
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  |||||||||| |||||| |||||  |||| |||||||||||| ||||||||||||||||    
T  3669700 tatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgt 3669799  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | | |||||||||||||||||||||    
T  3669800 ctctcttgcttgtgcggttgttctagcctcgatgtg 3669835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 1514060 - 1513918
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| || |||||||||||||||||||||||  |||||||||| |||||   |||| |||| ||||||||||||| ||||| |||||||| |    
T  1514060 tatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaaaagtgtggtat 1513961  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||| ||| | | |||| |||||||||||||||| ||||||    
T  1513960 ctctcttacatgtggggttattctagcctcgatgtggacggtc 1513918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 37544619 - 37544500
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||||||||||| |||||||| || |||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| ||  | | |    
T  37544619 gataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaagagtgtggtgtctttcttacttgtgcg 37544520  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  37544519 gttgttctagcctcgatgtg 37544500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 5420664 - 5420799
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||||||||||||||| |||||||||| |||||| ||||| ||||| ||||||||||||  |||||||||||  ||    
T  5420664 tatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgtaagagtgtgacgt 5420763  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||| |||||  | |||||||||| ||||||||||||    
T  5420764 ctccctcacttgtgtggttgttcaagcctcgatgtg 5420799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 9309005 - 9309136
Alignment:
Q  94 tcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaag---agtgtggtgtctctctcaca 190  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||  ||||| ||||| ||| |||||||| || |||   |||||||||||||||||||     
T  9309005 tcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttgggcaagagtagtgtggtgtctctctcact 9309104  T
Q  191 agcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |  ||||||||||||||||||||||| ||||||    
T  9309105 a-tgtggttgttctagcctcgatgtggacggtc 9309136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 9483316 - 9483191
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| |||||  ||||||||||| |||||||||||||||||||| |  |  | | |    
T  9483316 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgctcgtgcg 9483217  T
Q  197 gttgttctagcctcgatgtgaacggt 222  Q
    |||||||||||||||||||| |||||    
T  9483216 gttgttctagcctcgatgtggacggt 9483191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 30359622 - 30359727
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| || ||| ||||||||||||||||| ||||||||  |||||||||| |||||| ||||| |||| |||||||| |||| ||||||||||||||||    
T  30359622 tatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgt 30359721  T
Q  181 ctctct 186  Q
    ||||||    
T  30359722 ctctct 30359727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 34834905 - 34835024
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||| ||||  |||||||||| | |||| |||||  |||| |||||||||||| ||||||||||||||||||||||  |  | |||    
T  34834905 gataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtg 34835004  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  34835005 gttgttctagcctcgatgtg 34835024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 9309368 - 9309509
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||| ||||||||  |||||||||| |||||   ||||  |||| ||||||||| |  ||||||||||||||||    
T  9309368 tatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgt 9309467  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||  |  ||||||||||||||||||||||| ||||||    
T  9309468 ctctctcagta-tgtggttgttctagcctcgatgtggacggtc 9309509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 70419 - 70274
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||| ||||||||| |||||||||| |||||  ||||| ||| | |||||||||||||||||||||||||  ||    
T  70419 tatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtgtgacgt 70320  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    || |||  |  | |||||||||||| |||| ||| | |||||||||    
T  70319 ctatcttgcttgtgtggttgttctaacctcaatgcggacggtctcc 70274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 3670073 - 3670214
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||| ||||  |||||||||  |||||  ||||| | ||| |||||||||||| ||||||||||||||||    
T  3670073 tatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgt 3670172  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggt 222  Q
    ||||||  |  | | ||||||||||||||||||||| |||||    
T  3670173 ctctcttgcttgtgcggttgttctagcctcgatgtggacggt 3670214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 20870721 - 20870576
Alignment:
Q  78 ttatatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtgg 177  Q
    |||||||| | |||| |||||||||| |||||||||||||||| |||||||||| |||||  ||||| ||| | ||||||| |||| | |||||||||||    
T  20870721 ttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaagattttggataagagtgtgg 20870622  T
Q  178 tgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||  |  | |||||||||||| ||| ||| || ||||||    
T  20870621 tgtctctcttgcttgtgtggttgttctaaccttgatatggacggtc 20870576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 40518103 - 40518226
Alignment:
Q  100 aaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggtt 199  Q
    |||| |||||||||||||||  ||||||||||| ||||  ||||| ||| | |||||||||||| ||||||||||||| ||||||||  |  | ||||||    
T  40518103 aaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggtt 40518202  T
Q  200 gttctagcctcgatgtgaacggtc 223  Q
    |||||||||| |||||| ||||||    
T  40518203 gttctagccttgatgtggacggtc 40518226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 45122186 - 45122067
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| || ||  |||||  ||||  ||||||||||| |||||||||||||||||||||| ||  | | |    
T  45122186 gataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgggtaagagtgtggtgtctctcttacttgtggg 45122087  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  45122086 gttgttctagcctcgatgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 33113496 - 33113370
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||| | |||||||||| |||||  |||||  |||| ||||||| |||| ||||||||||||||||||||||  | || |||    
T  33113496 gataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgctagtgtg 33113397  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||| ||| ||| | ||||||    
T  33113396 gttgttctaggctcaatgcggacggtc 33113370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 34835222 - 34835356
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  |||||  |||| |||||| ||||| ||||||||||||||||    
T  34835222 tatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgt 34835321  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    | ||||  |  | |||||| |||||||||||||||    
T  34835322 cactcttgcttgtgtggttattctagcctcgatgt 34835356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 9608782 - 9608898
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||||||| | |||  ||||| |||| ||||||||||||| |||| |||||||| ||||||||  | || | |||||||||    
T  9608782 agtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggtatgagtgtggcgtctctcttgctagtgaggttgttct 9608881  T
Q  205 agcctcgatgtgaacgg 221  Q
    |||||||||||| ||||    
T  9608882 agcctcgatgtggacgg 9608898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 5915946 - 5916033
Alignment:
Q  147 cattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtctccgaactccc 234  Q
    |||| |||||||||||| ||||||||||||||||||||||  |  | | ||||||||||||||||||||| |||||| ||||||||||    
T  5915946 cattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccgaactccc 5916033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 9507819 - 9507898
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    ||||||||||||| |  |||||||||| |||||| ||||| |||||||||||||||||| ||||||||||||| ||||||    
T  9507819 agtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctct 9507898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 43274911 - 43274824
Alignment:
Q  94 tcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtc 181  Q
    |||||||||||||||||||||||| ||||||||||||| |||||  ||||| | |||  |||||||||||  ||||||||||||||||    
T  43274911 tcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttgagtaagagtgtggtgtc 43274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 1014377 - 1014255
Alignment:
Q  94 tcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagc 193  Q
    |||||||||| |||||||||||||||  |||||||||| |||||   ||||  | ||||||||| ||||| |||||||||||||||||||||   |  |     
T  1014377 tcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggtaagagtgtggtgtctctcctgcttgt 1014278  T
Q  194 gtggttgttctagcctcgatgtg 216  Q
    | |||||||||||||||||||||    
T  1014277 gcggttgttctagcctcgatgtg 1014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 30441094 - 30441233
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacat----attataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtg 176  Q
    ||||| |||||| || | ||||| |||||||||||||||     ||||||||||| ||| |  ||||| ||||| |||||||||||| ||||||||||||    
T  30441094 tatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtg 30441193  T
Q  177 gtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||||||  |  | | |||||||||||||||||||||    
T  30441194 gtgtctctcttgcttgtgcggttgttctagcctcgatgtg 30441233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 147464 - 147569
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||||||||  |||||| ||| |||||  ||||| | ||| |||||| ||||| ||||||||||||| ||    
T  147464 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaagagtgtggcgt 147563  T
Q  181 ctctct 186  Q
    ||||||    
T  147564 ctctct 147569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 9482733 - 9482608
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||  ||||| ||||| ||| ||| ||||   |||||||||||| |||||||  |  | | |    
T  9482733 gataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttgtataagagtgtggtatctctcttgcttgtgcg 9482634  T
Q  197 gttgttctagcctcgatgtgaacggt 222  Q
    |||||||||||||||||||| |||||    
T  9482633 gttgttctagcctcgatgtggacggt 9482608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 30359300 - 30359389
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||||| ||||||||  ||||||| || |||||  ||||| ||||  |||||||||||| ||||||||||||||||||||||    
T  30359300 gataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctct 30359389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 18372122 - 18371998
Alignment:
Q  98 ataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtgg 197  Q
    |||||| |||||||||||||||  |||||||||| ||||   |||||  |||| | |||||||||| |||||||||||||||| |||||| |  | | ||    
T  18372122 ataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtggtgtttctctcgcttgtgcgg 18372023  T
Q  198 ttgttctagcctcgatgtgaacggt 222  Q
    ||| ||||||||| |||||||||||    
T  18372022 ttgctctagcctcaatgtgaacggt 18371998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 9609111 - 9609222
Alignment:
Q  94 tcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagc 193  Q
    ||||||| || |||||||||||||||| |||||||||| | |||  ||||| ||||  |||||| ||||| ||||||||||||| ||||||||  | ||     
T  9609111 tcagatagaaaagtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctcttgctagt 9609210  T
Q  194 gtggttgttcta 205  Q
    ||||||||||||    
T  9609211 gtggttgttcta 9609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 18380162 - 18380059
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| ||  |||||| |||||||||||||||  ||||||||||  || | |||||| ||| ||||||||||||||  ||||||||||||||     
T  18380162 tatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaagagtgtggtgc 18380063  T
Q  181 ctct 184  Q
    ||||    
T  18380062 ctct 18380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 40579635 - 40579548
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    ||||||| |||||||||||||||  |||||||||| |||||  |||||   ||| | |||||||||||||||||||||||||||||||    
T  40579635 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtggtgtctct 40579548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 45122653 - 45122772
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| |||||  |||||  ||||  ||||||||||| |||| |||||||| ||||||||  |  | |||    
T  45122653 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctcttgcttgtgtg 45122752  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||| ||||||||||||    
T  45122753 gttgttcaagcctcgatgtg 45122772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 34835504 - 34835622
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||| ||||  |||||||||| |||||  |||||  |||| |||||| ||||| ||||||||||||||||| ||||  |  | |||    
T  34835504 gataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtg 34835603  T
Q  197 gttgttctagcctcgatgt 215  Q
    ||| |||||||||||||||    
T  34835604 gttattctagcctcgatgt 34835622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 34835770 - 34835888
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||| ||||  |||||||||| |||||  |||||  |||| |||||| ||||| ||||||||||||||||| ||||  |  | |||    
T  34835770 gataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttgtgtg 34835869  T
Q  197 gttgttctagcctcgatgt 215  Q
    ||| |||||||||||||||    
T  34835870 gttattctagcctcgatgt 34835888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 40518595 - 40518737
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||||||| || |||||||||||||||  |||||| ||| |||||  ||||| ||| |  ||||||||||| ||||||||||||  ||    
T  40518595 tatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaagagtgtgacgt 40518694  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    | ||||  |  | ||||||||||||||||| ||||| ||||||    
T  40518695 cactcttgcttgtgtggttgttctagcctcaatgtggacggtc 40518737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 8794140 - 8794229
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||||| |||| ||||||||| |||||||||| |||||| ||||| | | || ||||||||||| ||| |||||| |||||||||||    
T  8794140 gataaaagaataaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggtgagagtgcggtgtctctct 8794229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 12283886 - 12284020
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaa-tccattaccttaaggttttaggtaagagtgtggtg 179  Q
    ||||| |||||| |||||||||| |||||| |||||| || ||| |||||||| |||  ||||| || | |  ||||||||||| | ||||||||| |||    
T  12283886 tatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagtaaaatgacacataaactcaagt--cttaaggttttggataagagtgtagtg 12283983  T
Q  180 tctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||||||  | ||||||||||||||||| |||||    
T  12283984 tctctctcacttgtgtggttgttctagcctctatgtg 12284020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 32305506 - 32305591
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtct 182  Q
    ||||||| |||||||||||||||  |||||||||| | ||| |||||| ||||||||||||| |||| | ||||||||||| ||||    
T  32305506 gataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtct 32305591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 8918903 - 8918767
Alignment:
Q  87 tcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| |||||||  |||||||||||||||||  |||||||||| |||||  ||||| | |||  ||||||||||| ||||||||||||  |||| |||    
T  8918903 tcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttgggtaagagtgtgacgtctttct 8918804  T
Q  187 cacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
      |  | ||||||||| || |||||||||| ||||||    
T  8918803 tgcgtgtgtggttgttttaacctcgatgtggacggtc 8918767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 45122055 - 45121952
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  |||||| |||||||||||||||  |||||||||| |||||| |||||  |||| ||||||| |||| ||||| ||||||| ||    
T  45122055 tatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggtaacagtgtggcgt 45121956  T
Q  181 ctct 184  Q
    ||||    
T  45121955 ctct 45121952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 32640656 - 32640535
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||||      |||| |||||  ||||| ||||| |||||||||||| ||||||||||| | ||||||||  |    |||    
T  32640656 gataaaagagtaaaggttgaacatag-----gtaagaggaccgataaacccattgccttaaggttttgggtaagagtgttgcgtctctcttgcttttgtg 32640562  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
     |||||||||||||||||||| |||||    
T  32640561 attgttctagcctcgatgtgagcggtc 32640535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 25561961 - 25561825
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggtttt-aggtaagagtgtggtg 179  Q
    ||||| |||||| || |||||||||||||| ||||||||  |||||||||| |||||  |||||  ||||  |||||||||||  ||||||||||||       
T  25561961 tatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaagagtgtgaca 25561862  T
Q  180 tctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||||  |  | ||||||| |||||||||||||||    
T  25561861 tctctcttgcttgtgtggttgctctagcctcgatgtg 25561825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 147904 - 147975
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||| |||||||||||||||||||||| ||  | |  |||||||||||||| |||||| |||||    
T  147904 ccttaaggttttgggtaagagtgtggtgtctctcttacttgtgcagttgttctagcctcaatgtgagcggtc 147975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 1014000 - 1013881
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||   ||||||||| |||||  ||||| ||||| |||||  |||||  ||||||||||| ||||||| | ||  | | |    
T  1014000 gataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctcttttacttgtgcg 1013901  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  1013900 gttgttctagcctcgatgtg 1013881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 6651566 - 6651612
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||    
T  6651566 ataaattcattgccttaaggttttgggtaagagtgtggtgtctctct 6651612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 41129073 - 41129143
Alignment:
Q  153 cttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||| |||| ||||||||||||||||| ||  | |||||||||| | |||||||||| ||||||    
T  41129073 cttaaggttttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtc 41129143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 18371785 - 18371665
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||||||||||||    ||||||| | |||  ||||| ||||  |||||||||||| |||||||||||||||| |||||||   | | |    
T  18371785 gataaaatagtaaaggttgaacat----taagtaagaagacccataaacccatg-ccttaaggttttgggtaagagtgtggtgtgtctctcatttgtgcg 18371691  T
Q  197 gttgttctagcctcgatgtgaacggt 222  Q
    |||| |||||| |||||||| |||||    
T  18371690 gttgctctagcttcgatgtggacggt 18371665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 8919218 - 8919147
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||| | |||||||||||||||||| |  |  | |||||||||||||| |||||||| ||||||    
T  8919218 ccttaaggttttggataagagtgtggtgtctcttttgcttgtgtggttgttctagcttcgatgtggacggtc 8919147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 20995496 - 20995453
Alignment:
Q  146 ccattaccttaaggttttaggtaagagtgtggtgtctctctcac 189  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||    
T  20995496 ccattgccttaaggttttgggtaagaatgtggtgtctctctcac 20995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 6731967 - 6732013
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||| |||| ||||||||||||  |||||||||||||||||||||    
T  6731967 ataaattcattgccttaaggttttgagtaagagtgtggtgtctctct 6732013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 25561789 - 25561739
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaa 131  Q
    ||||| |||||| || |||||||||||||||||||||||  ||||||||||    
T  25561789 tatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaa 25561739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 40579349 - 40579279
Alignment:
Q  146 ccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||| ||||| | |||| ||||||||||||||||||||||  |  | | |||||||||||||||||||||    
T  40579349 ccattgccttaggattttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 40579279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 18372731 - 18372656
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtg 176  Q
    ||||||| |||||||||||||||  |||||||||| |||||| ||||| ||||| ||   ||||||| ||||||||||||    
T  18372731 gataaaatagtaaaggttgaaca-cttataagtaagaggactcataaacccattgcc---aggttttgggtaagagtgtg 18372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 4154811 - 4154707
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||| || |||  ||||||||||  |||||||| |||||||  |||||  |||| ||  |||||||| ||||||||||||| ||    
T  4154811 tatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgggtaagagtgtggcgt 4154712  T
Q  181 ctctc 185  Q
    |||||    
T  4154711 ctctc 4154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 53118103 - 53117978
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||| | |||| | | ||| ||||| ||||||| |||| ||||||||||| |||||||||||||||| |||    
T  53118103 gataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgggtaagagtgtagtgtctctctcacaagtgtg 53118005  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||| |||||||||||||||    
T  53118004 gttgttctagcatcgatgtgaacggtc 53117978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 12114707 - 12114572
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| || |||| || |||||||||||||||  |||||||||| |||||  ||||| |||||  ||||||||||| ||||||||||||||||    
T  12114707 tatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgt 12114608  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    |||||| ||  | | ||||||||||||| |||||||    
T  12114607 ctctcttacttgtgcggttgttctagccacgatgtg 12114572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 54017945 - 54017826
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| |||||| ||||| | |   |||||||||||| |||||||||||||||||||||| ||  | |||    
T  54017945 gataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcttacttgtgtg 54017846  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||| ||||||||    
T  54017845 gttgttctagcttcgatgtg 54017826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 37990768 - 37990642
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||| ||||||||  |||||||||| |||||| |||||  |||| |||||||||||| ||||||||||||||||||||||  |  | |||    
T  37990768 gataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttgtgtg 37990669  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
     ||||||||||||||||||| ||||||    
T  37990668 attgttctagcctcgatgtggacggtc 37990642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 37991106 - 37990980
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||  |||||||||| ||||| ||||||  |||  |||||||||||| ||||||||||||||||||||||  |    |||    
T  37991106 gataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctctcttgcttatgtg 37991007  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    |||||||||||||||||||| ||||||    
T  37991006 gttgttctagcctcgatgtggacggtc 37990980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 43346936 - 43346794
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| |||||||||| |||||||||||||||  |||||||||| || ||  |||||  |||| |||||||||||| ||||||||||||||||    
T  43346936 tatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgt 43346837  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||| ||||| ||||||    
T  43346836 ctctcttgcttgtgcggttgttctagcctctatgtggacggtc 43346794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 45395798 - 45395653
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    |||||||||||| ||  ||||||||||||||||| ||||  |||||||||| ||||   ||||| |||||  ||||| ||||| ||||||||||||||||    
T  45395798 tatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttgggtaagagtgtggtgt 45395699  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtctcc 226  Q
    |||||||||  | | ||||| ||||||||||||||| | |||||||    
T  45395698 ctctctcacttgtggggttgctctagcctcgatgtggagggtctcc 45395653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 41359906 - 41359775
Alignment:
Q  85 tatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    |||||||| || |||| || ||||||||||||| |  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||| ||||| ||||||    
T  41359906 tatcccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctct 41359807  T
Q  185 ctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||| |  | |||||||||||||||||||||||    
T  41359806 ctcgcttgtgtggttgttctagcctcgatgtg 41359775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 32589716 - 32589858
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| | |||||||| | |||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| |||||||||| | |||    
T  32589716 tatatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgt 32589815  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||| ||||||||| ||||||    
T  32589816 ctctcttgcttgtgtggttgttctaggctcgatgtggacggtc 32589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 33803397 - 33803255
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||   ||||||||| |||||  ||||| ||||| | ||||||| || ||||||||||||| ||    
T  33803397 tatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggtaagagtgtggcgt 33803298  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||| ||| |  | ||||||||||||||||||||||| ||||||    
T  33803297 ctccctctcttgtgtggttgttctagcctcgatgtggacggtc 33803255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 42342533 - 42342391
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||| ||||  |||||||||| |||||  |||||||||||  ||||||||||| ||||||||||||  ||    
T  42342533 tatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtgacgt 42342434  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||||||||||||||| ||||| ||||||    
T  42342433 ctctcttgcttgtgcggttgttctagcctcaatgtggacggtc 42342391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 32463046 - 32462902
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaa-ggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtg 179  Q
    ||||| |||||| || |||| ||||||||| ||||||| |  |||||||||| | |||| ||||| ||||| ||||||||||||  ||||||||||||||    
T  32463046 tatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagtaagagtgtggtg 32462947  T
Q  180 tctctctcacaagcgtggttgttctagcctcgatgtgaacggtct 224  Q
    |||||||  |  | | ||||||||||||||||||||| |||||||    
T  32462946 tctctcttgcttgtgcggttgttctagcctcgatgtgtacggtct 32462902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 22304582 - 22304717
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| ||||||||||||| |  |||||||||| |||||  |||||  |||| |||||||||||| ||||||||||||||||    
T  22304582 tatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgt 22304681  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | | ||||||||||| |||||||||    
T  22304682 ctctcttgcttgtgcggttgttctagtctcgatgtg 22304717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 39935084 - 39934965
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  |||||||||| ||||   ||||| ||||| |||||| |||||  ||||||||||| |||||||||  |  | |||    
T  39935084 gataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtgatgtctctcttgcttgtgtg 39934985  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  39934984 gttgttctagcctcgatgtg 39934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 42342219 - 42342080
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||| ||| ||    |||||||||| |||||| |||||  |||| |||||||||||| ||||||||||||| ||||||||  |  | | |    
T  42342219 gataaaagagtaaatgttcaatgccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgcg 42342120  T
Q  197 gttgttctagcctcgatgtgaacggt-ctccgaactccct 235  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  42342119 gttgttctagcctcgatgtggacggtcctccgaactccct 42342080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 8327917 - 8328056
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||| |||| || |||||||||| || ||  |||||   | | |||||||||||| ||||||||||||||||    
T  8327917 tatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgt 8328016  T
Q  181 ctctctcacaagcgtg----gttgttctagcctcgatgtg 216  Q
    |||||||||||| | |    ||||||||||||||||||||    
T  8328017 ctctctcacaagtgagtgcagttgttctagcctcgatgtg 8328056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 15772883 - 15773009
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||| ||||||||  |||||||||| |||||  |||||  |||| | |||||||||| | ||||||||||||||||||||  |  | |||    
T  15772883 gataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggataagagtgtggtgtctctcttgcttgtgtg 15772982  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||| |||||||||| ||||||    
T  15772983 gttgttctaacctcgatgtggacggtc 15773009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 29645047 - 29644905
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || |||||||||||||||||| ||||  |||||||||| |||||  ||||| |||||  ||||||||||| ||||||||||||| ||    
T  29645047 tatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggcgt 29644948  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |    | ||||||| ||||||||||||| ||||||    
T  29644947 ctctcttgcttatgcggttgttttagcctcgatgtggacggtc 29644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 35946535 - 35946677
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| || || |||||||||||| ||||| ||||||||||    
T  35946535 tatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgt 35946634  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | |   ||||||||||||||||||| ||||||    
T  35946635 ctctcttgcttgtgcaattgttctagcctcgatgtggacggtc 35946677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 3135606 - 3135457
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaaca---tattata--agtaaaaggactt--ataaatccattaccttaaggttttaggtaagagt 173  Q
    ||||| |||||||||||||||||||||||| ||||||||   |||||||  ||||| |||||    ||||| ||||| |||||||||||||| |||||||    
T  3135606 tatatgtcccacctcagataaaagagtaaaagttgaacaccttattatattagtaagaggacccccataaacccattgccttaaggttttagataagagt 3135507  T
Q  174 gtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||||| |  |  | | ||||||||||||||||||||| ||||||    
T  3135506 gtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtc 3135457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 1634432 - 1634318
Alignment:
Q  108 aaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagc 207  Q
    ||||||| |||| ||||||||||| |||||  ||||| |||||  ||||||||||| |||||||||| ||| |||||||||| |   |||||||||||||    
T  1634432 aaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttgggtaagagtgcggtatctctctcacta-tatggttgttctagc 1634334  T
Q  208 ctcgatgtgaacggtc 223  Q
    ||||||||| ||||||    
T  1634333 ctcgatgtggacggtc 1634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 11661980 - 11662102
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaagg-ttttaggtaagagtgtggtgtctctctcacaagcgt 195  Q
    |||||||||||||||||||||||  ||| |||| | ||| || ||||| | ||| |||||||| |||| |||||||||| |||||||||||||   | ||    
T  11661980 gataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaagagtgaggtgtctctctca-ttgtgt 11662078  T
Q  196 ggttgttctagcctcgatgtgaac 219  Q
    ||||||||||||||||||||||||    
T  11662079 ggttgttctagcctcgatgtgaac 11662102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 25755407 - 25755542
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| || ||| |||||||||||||||||||||||| |  |||||||||| |||||| |||||||||||  | ||| ||| | ||||| ||||||| ||    
T  25755407 tatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaagtgtggcgt 25755506  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||  |  | | |||||||||||||||||||||    
T  25755507 ctctcttgcttgtgcggttgttctagcctcgatgtg 25755542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 54018327 - 54018208
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||||||||||| |||||||  |||||||||| |||||  ||||| | |   |||||||||||| |||||||||||||||||||||   |  | |||    
T  54018327 gataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcatgcttgtgtg 54018228  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||||||||    
T  54018227 gttgttctagcctcgatgtg 54018208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 29644726 - 29644621
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||| |||||||||||||||||||  |||||||||| || ||  ||||| |||||  ||||||||||| ||||||||||||| ||    
T  29644726 tatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtgtggcgt 29644627  T
Q  181 ctctct 186  Q
    ||||||    
T  29644626 ctctct 29644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 9240186 - 9240297
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||| | ||||||  |||||||||| |||||  ||||||||||||||||||| |||  | ||||| ||||||||||||||||  || | |||| ||||    
T  9240186 agtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagatttcggataagaatgtggtgtctctctcaatagtgcggttattct 9240285  T
Q  205 agcctcgatgtg 216  Q
    ||||||||||||    
T  9240286 agcctcgatgtg 9240297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 15773205 - 15773308
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| ||  ||||||||||||| ||||||||| |||||||||| |||||| ||||   |||| |||||| ||||| |||||||||||| |||    
T  15773205 tatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagttttgggtaagagtgtgatgt 15773304  T
Q  181 ctct 184  Q
    ||||    
T  15773305 ctct 15773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 53577393 - 53577512
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| |||||||||||||||| ||| || |||  |||   |||||   ||| ||||||||| || ||||||||||||||||||||||  |||| |||    
T  53577393 gataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgggtaagagtgtggtgtctctcttgcaagtgtg 53577492  T
Q  197 gttgttctagcctcgatgtg 216  Q
    ||||||||||||||| ||||    
T  53577493 gttgttctagcctcggtgtg 53577512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 22304059 - 22303965
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    ||||||||||  ||||  ||||| ||||| |||||||||||| | ||||||||||||||||||||  |  | |||||||||||||||||||||||    
T  22304059 ttataagtaagcggacccataaacccattgccttaaggttttggataagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtg 22303965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 3135218 - 3135113
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||| ||||||||  ||||||||||||| ||  ||||| ||| | || |||||||||  |||||||||||||||    
T  3135218 tatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtgtggtgt 3135119  T
Q  181 ctctct 186  Q
    ||||||    
T  3135118 ctctct 3135113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 22303759 - 22303659
Alignment:
Q  126 aagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgtgaacggtctc 225  Q
    |||||| |||||  ||||| ||||| |||||||||||| |||||||||||||||| ||||| ||  | | | ||||||||||||||||||  ||||||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttctcttacttgtgcgattgttctagcctcgatgtagacggtctc 22303660  T
Q  226 c 226  Q
    |    
T  22303659 c 22303659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 39389099 - 39389186
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    ||||||| |||||||||||||||  ||| || ||| |||||  ||||| |||||  ||||||||||| ||||||||||||||||||||    
T  39389099 gataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 39389186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 25739570 - 25739428
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||| |||||||||  ||||||||| |||||  |||||  |||| | || ||||||| ||||||||||||  ||    
T  25739570 tatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgggtaagagtgtgacgt 25739471  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | | ||| ||||||||||||||||| ||||||    
T  25739470 ctctctagcttgtgcggtagttctagcctcgatgtggacggtc 25739428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 39914265 - 39914399
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| || ||| |||||||||| |||| ||||||||||  |||||| ||| |||||  ||||| | | | ||||||  |||| | ||||||||||||||    
T  39914265 tatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatattttggataagagtgtggtgt 39914364  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    |||||||||    | ||||||||||||||||||||    
T  39914365 ctctctcacttatgcggttgttctagcctcgatgt 39914399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 52634689 - 52634793
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| ||||||||||||||   |||||||||| || ||  ||||| ||||| |||||||||||| ||||||||||||  ||    
T  52634689 tatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaagag-acccataaacccattgccttaaggttttgggtaagagtgtgacgt 52634787  T
Q  181 ctctct 186  Q
    ||||||    
T  52634788 ctctct 52634793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 216
Target Start/End: Complemental strand, 21832464 - 21832355
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||||||||  |||||||||| |||||| |||||  |||  |||||||||||| |||||||  |||| ||||||||  |  |  ||||||||||    
T  21832464 agtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggtaaga--gtggcgtctctcttgcttgtctggttgttct 21832367  T
Q  205 agcctcgatgtg 216  Q
    ||||||||||||    
T  21832366 agcctcgatgtg 21832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 53596032 - 53596080
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctca 188  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  53596032 ataaacccgttaccttaaggttttgggtaagagtgtggtgtctctctca 53596080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 53596347 - 53596395
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctca 188  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  53596347 ataaacccgttaccttaaggttttgggtaagagtgtggtgtctctctca 53596395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 31190031 - 31190127
Alignment:
Q  82 atatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtc 181  Q
    |||| |||||| || |||||||||||||||||||||||  |||||||| | |||||        ||||  |||||||||||| |||||||||||||||||    
T  31190031 atatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggac--------ccatagccttaaggttttgggtaagagtgtggtgtc 31190122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 45901754 - 45901832
Alignment:
Q  108 aaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    ||||||||||||  |||||||||| |||||  |||||  |||  |||||| ||||| ||||||||||||||||||||||    
T  45901754 aaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttttggtaagagtgtggtgtctctct 45901832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 39336086 - 39336009
Alignment:
Q  110 aggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    ||||||||||  |||||| | | | |||| |||||  |||| |||||||||||| |||||||||||||||||||||||    
T  39336086 aggttgaacactttataaatgataagactcataaaatcattgccttaaggttttgggtaagagtgtggtgtctctctc 39336009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 53596547 - 53596595
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctctctca 188  Q
    ||||| |||||  |||||| |||||||||||||||||||||||||||||    
T  53596547 ataaacccattgacttaagattttaggtaagagtgtggtgtctctctca 53596595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 54017634 - 54017590
Alignment:
Q  140 ataaatccattaccttaaggttttaggtaagagtgtggtgtctct 184  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  54017634 ataaacccattgccttaaggttttgggtaagagtgtggtgtctct 54017590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 11661604 - 11661639
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||||||||||| |||||||||||||||||||||||    
T  11661604 ccttaaggttttgggtaagagtgtggtgtctctctc 11661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 47964621 - 47964555
Alignment:
Q  123 tataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcac 189  Q
    ||||||| | |||||  ||||| | ||| |||||||||||| ||||||||||||| |||||||||||    
T  47964621 tataagtgagaggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctctcac 47964555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 4823684 - 4823769
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtct 182  Q
    ||||||| |||||| ||| ||||  |||||||||  |||||  |||||  |||| ||||||| |||| ||||||||||||||||||    
T  4823684 gataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattgccttaagattttgggtaagagtgtggtgtct 4823769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 49336808 - 49336727
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||| ||  |||||||||| |||||  ||||| ||||   ||||| ||| | ||||||||||||||||||||||    
T  49336808 agtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaagagtgtggtgtctctct 49336727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 7766855 - 7766794
Alignment:
Q  152 ccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttctagcctcgatgt 215  Q
    |||||||||||||||||||| ||||| |||||||  ||  |  |||||||||||||||||||||    
T  7766855 ccttaaggttttaggtaagattgtggcgtctctc--acttgtatggttgttctagcctcgatgt 7766794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 48127681 - 48127641
Alignment:
Q  147 cattaccttaaggttttaggtaagagtgtggtgtctctctc 187  Q
    |||||||||||| |||| |||||| ||||||||||||||||    
T  48127681 cattaccttaagattttgggtaagtgtgtggtgtctctctc 48127641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 1235 - 1110
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    |||||||||||||||||||||||  ||||||| ||||||||| ||||| ||||| |||||||||||| ||||||||| ||||||||||||       |||    
T  1235 gataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagtatggtgtctctcttgtttatgtg 1136  T
Q  197 gttgttctagcctcgatgtgaacggt 222  Q
    |||||||||||||||||||| |||||    
T  1135 gttgttctagcctcgatgtggacggt 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 1795 - 1693
Alignment:
Q  122 ttataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct--------cacaagcgtggttgttctagcctcgat 213  Q
    |||||||| | |||||  ||||| ||||| |||||||||||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||    
T  1795 ttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctctctctctcacacaagtgtggttgttctagcctcgat 1696  T
Q  214 gtg 216  Q
    |||    
T  1695 gtg 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 659 - 524
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || | |||||||||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| ||||||||||||||||    
T  659 tatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 560  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtg 216  Q
    || |||  |  | |||||| ||||||||||||||||    
T  559 ctttcttgcttgagtggtttttctagcctcgatgtg 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 287 - 150
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgt 180  Q
    ||||| |||||| || ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||   ||| |||||| |||||||| ||||||||    
T  287 tatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc-ataaa-ccata--ctttaggttt-aggtaagaatgtggtgt 193  T
Q  181 ctctctcacaagcgtggttgttctagcctcgatgtgaacggtc 223  Q
    ||||||  |  | ||||||||||||||||||||||| ||||||    
T  192 ctctcttgcttgagtggttgttctagcctcgatgtggacggtc 150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 5394 - 5475
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctct 186  Q
    |||||||||||||||  |||||||||| |||||  ||||| ||||| ||||||| |||| | ||||||||||||||||||||    
T  5394 agtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctct 5475  T

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Target: scaffold0078; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 5019 - 5130
Alignment:
Q  105 agtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtggttgttct 204  Q
    |||||||||| || || |||||||||||| |||  |||||  |||| ||||| |||||| ||||||||||||||||||||||| |    | ||||| |||    
T  5019 agtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatggttttgggtaagagtgtggtgtctctctcgcttatgcggttgctct 5118  T
Q  205 agcctcgatgtg 216  Q
    ||||||||||||    
T  5119 agcctcgatgtg 5130  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 223
Target Start/End: Original strand, 47389 - 47515
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaaggttttaggtaagagtgtggtgtctctctcacaagcgtg 196  Q
    ||||||| ||||||| |||||||  |||||||||| || |   ||||| ||||| |||||| ||||| ||||| | ||||||||||||||  |  ||| |    
T  47389 gataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgggtaaaaatgtggtgtctctcttgcttgcgcg 47488  T
Q  197 gttgttctagcctcgatgtgaacggtc 223  Q
    ||||||||| |||||||||| ||||||    
T  47489 gttgttctaacctcgatgtggacggtc 47515  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 17601 - 17496
Alignment:
Q  81 tatatatcccacctcagataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaagg--ttttaggtaagagtgtggt 178  Q
    ||||| || ||| |||||||||| |||||||||||||||  || ||||||| |||||  ||||| ||||  ||||||||  |||| ||||||||| ||||    
T  17601 tatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagccttaaggttttttgggtaagagtatggt 17502  T
Q  179 gtctct 184  Q
    ||||||    
T  17501 gtctct 17496  T

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Target: scaffold0734 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 5806 - 5867
Alignment:
Q  97 gataaaagagtaaaggttgaacatattataagtaaaaggacttataaatccattaccttaag 158  Q
    ||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||    
T  5806 gataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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