View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17148_high_12 (Length: 315)
Name: NF17148_high_12
Description: NF17148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17148_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 10120960 - 10121257
Alignment:
| Q |
1 |
ccttttcttagaagtctcgtgaaaacatttattagtcggttttcacatggacttacacacnnnnnnnatccttttacttttatgaacatcatttcataac |
100 |
Q |
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| T |
10120960 |
ccttttcttagaagtctcgtgaaaacatttattagtcggttttcacatggatttacacactttttttatccttttacttttatgaacatcatttcataac |
10121059 |
T |
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| Q |
101 |
tatattttccagtgtgataacttcaagcttaaatgtgaccaattggaaatacttaaggcaataactatattttacttggattttgctaataaatgggaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10121060 |
tatattttccagtgtgataacttcaagcttaaatgtgaccaattggaaatagttaaggcaataactatattttacttggattttgctaataaatgggaat |
10121159 |
T |
|
| Q |
201 |
attaacaggttttaatcataagtcataacca-ttatcacactgttcacacaggaatctggccagaatccccaagttttagagacactgacatgccacc |
297 |
Q |
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||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10121160 |
attaacaggttttaatcataagtcataaccatttatcacactattcatacaggaatctggccagaatccccaagttttagagacactgacatgccacc |
10121257 |
T |
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