View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17148_high_6 (Length: 428)
Name: NF17148_high_6
Description: NF17148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17148_high_6 |
 | |
|
| [»] chr5 (24 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
| [»] chr7 (2 HSPs) |
| |
|
| [»] scaffold0627 (2 HSPs) |
| | |
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Alignment Details
Target: chr5 (Bit Score: 414; Significance: 0; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 11 - 428
Target Start/End: Complemental strand, 8529672 - 8529255
Alignment:
| Q |
11 |
cagagatattgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtc |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8529672 |
cagagatattgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccaatagtgatctgcaacccagtc |
8529573 |
T |
|
| Q |
111 |
acgggggagttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8529572 |
acgggggagttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaat |
8529473 |
T |
|
| Q |
211 |
ataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8529472 |
ataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctg |
8529373 |
T |
|
| Q |
311 |
gagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8529372 |
gagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaa |
8529273 |
T |
|
| Q |
411 |
aggtcaatattggttttc |
428 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
8529272 |
aggtcaatattggttttc |
8529255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 12 - 428
Target Start/End: Complemental strand, 8536235 - 8535819
Alignment:
| Q |
12 |
agagatattgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtca |
111 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8536235 |
agagattttgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtca |
8536136 |
T |
|
| Q |
112 |
cgggggagttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaata |
211 |
Q |
| |
|
| |||||||| ||||||||||||||||||| | | ||| || ||| ||||||| || ||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8536135 |
ctggggagtttataagacttcctgaatctattgcggatcaaaatcgggtaagaaggctaggacaagctggttttggtttccaacctaaaactaatgaata |
8536036 |
T |
|
| Q |
212 |
taaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctgg |
311 |
Q |
| |
|
|||||| |||| | ||||| | ||||||||||||| ||||||| ||||| |||||||||| ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
8536035 |
taaggtgataaacatgtgggtgagacatgttaaacgtgccaatgtgtgggagtttgagcgtttgacccttgagataaacacacttggaaccccatcctgg |
8535936 |
T |
|
| Q |
312 |
agaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaaa |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||| |
|
|
| T |
8535935 |
agaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcactacattggctaagatttgatggtctgcaaa |
8535836 |
T |
|
| Q |
412 |
ggtcaatattggttttc |
428 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
8535835 |
ggtcaatattgattttc |
8535819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 19 - 428
Target Start/End: Original strand, 1599679 - 1600088
Alignment:
| Q |
19 |
ttgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacggggga |
118 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
1599679 |
ttgataagtttaatattgtgaattcttgcaatggtttactttgtttgtctgacccatatttcggaaacccattagtgatctgcaacccaatcactgggga |
1599778 |
T |
|
| Q |
119 |
gttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaatataaggta |
218 |
Q |
| |
|
|||||||||||||||||||||||| | |||| |||||| ||| ||| |||||| | ||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1599779 |
gttcataagacttcctgaatctaccgcgaatcaaactcgggtaggaaggcaaggacgagctgcttttggtttccaacctaaaactaatgaatataaggtg |
1599878 |
T |
|
| Q |
219 |
ataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatg |
318 |
Q |
| |
|
|||| | || || | ||| ||||||||| ||||||| || || |||| || ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1599879 |
ataaacatgagggtgagatatgttaaacgtgccaatgcgttggagtttaagattgtgatccttgagataaacacacttggaacaccatcctggagaaatg |
1599978 |
T |
|
| Q |
319 |
ttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaaaggtcaat |
418 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |
|
|
| T |
1599979 |
ttgaagtggatcctcaaatttctttttggatgcttaagaatcccacttgtgtgaatggtgcacttcattggataagatatgagggtgagcaaatgtcaat |
1600078 |
T |
|
| Q |
419 |
attggttttc |
428 |
Q |
| |
|
|||||||||| |
|
|
| T |
1600079 |
attggttttc |
1600088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 20 - 428
Target Start/End: Original strand, 9074118 - 9074514
Alignment:
| Q |
20 |
tgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggag |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| | ||||||||||||||||||||| |||||| |
|
|
| T |
9074118 |
tgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgaaccaactaccggaaacccttcagtgatctgcaacccagtcacaggggag |
9074217 |
T |
|
| Q |
120 |
ttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaatataaggtaa |
219 |
Q |
| |
|
|||||||||||||||||| |||| || ||||||||||| ||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9074218 |
ttcataagacttcctgaagctaccacgaatcgaactcgggtaagaatggtaggacaagttggttttggattccaacctaatactaatgaatataaggtaa |
9074317 |
T |
|
| Q |
220 |
taagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgt |
319 |
Q |
| |
|
|||| ||||||||||||||| ||||| |||||| ||| |||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
9074318 |
taagaatgtggataagacatggtaaacgtgccaa------------tgaccgtgtgatccttcagataaacacacttggaacaacaatattgagaaatgt |
9074405 |
T |
|
| Q |
320 |
tgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaaaggtcaata |
419 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
9074406 |
tgaagtggatcctcaaatttcttttttgagtctcgagtatcccacttgtgtgaatggtgcacttcattggataagatatgaaaatcagcaaaggtcaata |
9074505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 260 - 421
Target Start/End: Complemental strand, 8641866 - 8641705
Alignment:
| Q |
260 |
ggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtat |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
8641866 |
ggtgtttgagcgtgtgatccttgagataaacacacttggagcaccatcatggagaaatgttgaagtggatcctcagatttctatttcgagtcttaagtat |
8641767 |
T |
|
| Q |
360 |
cccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaaaggtcaatatt |
421 |
Q |
| |
|
||||||||||||||| ||| |||||||| || | ||||||||| |||||||||||||||| |
|
|
| T |
8641766 |
cccacttgtgtgaatagtgttcttcattgaatcaaatttgagggggagcaaaggtcaatatt |
8641705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 422
Target Start/End: Complemental strand, 9004028 - 9003787
Alignment:
| Q |
179 |
tggttttggattccaacctaaaactaatgaatataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatc |
278 |
Q |
| |
|
||||||||| | ||||||||||||||||| |||||||| |||| | |||| |||||||||| | || |||| | | ||||||||||||| |||| |
|
|
| T |
9004028 |
tggttttggttatcaacctaaaactaatgattataaggtgataaaaatatggacgagacatgttagaggtgacaataactttgtgtttgagcgtgcgatc |
9003929 |
T |
|
| Q |
279 |
cttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtg |
378 |
Q |
| |
|
||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||| | ||| ||| |||||| || ||||| |||||||||||||| | |
|
|
| T |
9003928 |
cttgagata--cacactgggaacaccatcatggagaaatgttgaagtggatcctcaactgtctatttggagtcttaattatccgacttgtgtgaatggcg |
9003831 |
T |
|
| Q |
379 |
cacttcattggataagatttgagggtcagcaaaggtcaatattg |
422 |
Q |
| |
|
||||||||||||| |||||||| || ||||| |||||||||| |
|
|
| T |
9003830 |
cacttcattggatcagatttgattttctgcaaatgtcaatattg |
9003787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 400
Target Start/End: Original strand, 2856268 - 2856647
Alignment:
| Q |
24 |
aagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggagttca |
123 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||||| ||||| ||||| | |||| ||| |||||||| ||||||||||| ||| |||| || | |
|
|
| T |
2856268 |
aagtttggcattgtgaattcttgcaatggcttgctttgtttatctgaaacatctatcggaagccctttagtgatttgcaacccagtaacgagggaattta |
2856367 |
T |
|
| Q |
124 |
taagacttcctgaatctactacaaat-cgaactcgagtaagaatgcaaggt--caagctggttttggattccaacctaaaactaatgaatataaggtaat |
220 |
Q |
| |
|
|| |||||||||| |||||| | | | ||| | ||| | ||| || |||||||||||||| |||||||| |||||||||||||||||||| || |
|
|
| T |
2856368 |
caatacttcctgaacttactacgacttctgactggtttaacagtgctcgggtacaagctggttttggtttccaacccaaaactaatgaatataaggtgat |
2856467 |
T |
|
| Q |
221 |
aagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgtt |
320 |
Q |
| |
|
| |||||| | | |||||| || | ||||| | ||||||||||||||| | || |||||| |||| || |||||| |||| |||||||||||| |
|
|
| T |
2856468 |
cataatgtggaacaaatatgttagacgagacaatcgtttggtgtttgagcgtgtagtgctcgagatacacacgctcggaacatcatcatggagaaatgtt |
2856567 |
T |
|
| Q |
321 |
gaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttga |
400 |
Q |
| |
|
||||||||||||||||||||||||| || || | |||| || ||||||||||| |||||||||||||| | |||||| |
|
|
| T |
2856568 |
gaagtggatcctcaaatttcttttttgaagcttttgaatccaacatgtgtgaatggcgcacttcattggattatatttga |
2856647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 400
Target Start/End: Original strand, 2873878 - 2874257
Alignment:
| Q |
24 |
aagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggagttca |
123 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||||| ||||| ||||| | |||| ||| |||||||| ||||||||||| ||| |||| |||| |
|
|
| T |
2873878 |
aagtttggcattgtgaattcttgcaatggcttgctttgtttatctgaaacatctatcggaagccctttagtgatttgcaacccagtaacgagggaattca |
2873977 |
T |
|
| Q |
124 |
taagacttcctgaatctactacaaat-cgaactcgagtaagaatgcaaggt--caagctggttttggattccaacctaaaactaatgaatataaggtaat |
220 |
Q |
| |
|
|| |||||||||| |||||| | | | ||| | ||| | ||| || |||||||||||| | |||||||| |||||||||||||||||||| || |
|
|
| T |
2873978 |
caatacttcctgaacttactacgacttctgactggtttaacagtgctcgggtacaagctggttttagtttccaacccaaaactaatgaatataaggtgat |
2874077 |
T |
|
| Q |
221 |
aagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgtt |
320 |
Q |
| |
|
| | |||| | | |||||| || | ||||| | ||||||||||||||| | || |||||| |||| || |||||| |||| |||||||||||| |
|
|
| T |
2874078 |
cataatatggaacaaatatgttagacgagacaatcgtttggtgtttgagcgtgtagtgctcgagatacacacgctcggaacaccatcatggagaaatgtt |
2874177 |
T |
|
| Q |
321 |
gaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttga |
400 |
Q |
| |
|
||||||||||||||||||||||||| || || | |||| || ||||||||||| |||||||||||||| | |||||| |
|
|
| T |
2874178 |
gaagtggatcctcaaatttcttttttgaagcttttgaatccaacatgtgtgaatggcgcacttcattggattatatttga |
2874257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 345
Target Start/End: Original strand, 2904384 - 2904708
Alignment:
| Q |
24 |
aagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggagttca |
123 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||||| ||||| ||||| |||| ||| |||| ||| ||||||||||| ||| |||| |||| |
|
|
| T |
2904384 |
aagtttggcattgtgaattcttgcaatggcttgctttgtttatctgaaacatctaccggaagccctttagcgatttgcaacccagtaacgagggaattca |
2904483 |
T |
|
| Q |
124 |
taagacttcctgaatctactacaaat-cgaactcgagtaagaatgcaaggt--caagctggttttggattccaacctaaaactaatgaatataaggtaat |
220 |
Q |
| |
|
|| |||||||||| |||||| | | | ||| | ||| | ||| || |||||||||||||| |||||||| |||||||||||||||||||| || |
|
|
| T |
2904484 |
caatacttcctgaacttactacgacttctgactggtttaacagtgctcgggtgcaagctggttttggtttccaacccaaaactaatgaatataaggtgat |
2904583 |
T |
|
| Q |
221 |
aagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgtt |
320 |
Q |
| |
|
|| |||||| | |||||||| || ||||| | | |||||| |||||| | | ||||||||| |||| || ||||||||||| ||||||||| || |
|
|
| T |
2904584 |
aataatgtggaataaacatgttagacgggccaacgatttggtgttcgagcgtctagtgcttgagatacacacgctcggaacaacatcatggagaaatctt |
2904683 |
T |
|
| Q |
321 |
gaagtggatcctcaaatttcttttt |
345 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
2904684 |
gaagtggatcctcaaatttcttttt |
2904708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 165 - 341
Target Start/End: Complemental strand, 8637454 - 8637278
Alignment:
| Q |
165 |
atgcaaggtcaagctggttttggattccaacctaaaactaatgaatataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgt |
264 |
Q |
| |
|
|||| ||| |||| ||||||||| ||||||||||||||||||||||||||||| ||||| | ||| || ||||||||| | ||||| ||||||| |
|
|
| T |
8637454 |
atgcgaggacaagttggttttggtttccaacctaaaactaatgaatataaggtgataagaatatggggcagtgatgttaaacgaggcaatcgttgggtgt |
8637355 |
T |
|
| Q |
265 |
ttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttct |
341 |
Q |
| |
|
|||| ||| || ||||||||||| | |||||||||||| |||| |||||||||| |||||||||||| ||||||||| |
|
|
| T |
8637354 |
ttgatcgtatggtccttgagatatatacacttggaacaccatcatggagaaatgctgaagtggatccccaaatttct |
8637278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 400
Target Start/End: Original strand, 2844594 - 2844820
Alignment:
| Q |
174 |
caagctggttttggattccaacctaaaactaatgaatataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtg |
273 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| || | |||||| | | |||||| || ||||| | |||||||||||||| |
|
|
| T |
2844594 |
caagctggttttggtttccaacccaaaactaatgaatataaggtgatcataatgtggaacaaatatgttagacgaaacaatcgtttggtgtttgagcgtg |
2844693 |
T |
|
| Q |
274 |
tgatccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaa |
373 |
Q |
| |
|
| | || |||||| |||| ||||||||| |||| |||||||| |||||||||||||||||||||||||||| || || | |||| || |||||||| |
|
|
| T |
2844694 |
tagtgctcgagatacacacgcttggaacaccatcatggagaaaggttgaagtggatcctcaaatttcttttttgaagcttttgaatccaacatgtgtgaa |
2844793 |
T |
|
| Q |
374 |
tggtgcacttcattggataagatttga |
400 |
Q |
| |
|
||| |||||||||||||| | |||||| |
|
|
| T |
2844794 |
tggcgcacttcattggattatatttga |
2844820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 8547470 - 8547588
Alignment:
| Q |
27 |
tttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggagttcataa |
126 |
Q |
| |
|
|||||||||||||||||||||| ||| || |||||||||||||| ||| || |||||||| |||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
8547470 |
tttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataa |
8547569 |
T |
|
| Q |
127 |
gacttcctgaatctactac |
145 |
Q |
| |
|
|||||| |||| ||||||| |
|
|
| T |
8547570 |
gacttcttgaagctactac |
8547588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 277 - 402
Target Start/End: Complemental strand, 8644687 - 8644553
Alignment:
| Q |
277 |
tccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttcttt---------ttcgagtctaaagtatcccacttg |
367 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || |||||| | |||||||||| |
|
|
| T |
8644687 |
tccttgagataaacacacttggaacaccatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgagtcttcattatcccactta |
8644588 |
T |
|
| Q |
368 |
tgtgaatggtgcacttcattggataagatttgagg |
402 |
Q |
| |
|
||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
8644587 |
tgttaatggtgcgcttcattggatcagatttgagg |
8644553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 8678304 - 8678225
Alignment:
| Q |
263 |
gtttgagcgtgtgatccttgagataaacacacttggaa-caacatcctggagaaatgttgaagtggatcctcaaatttct |
341 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||||| || |||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
8678304 |
gtttgatcgtatgatccttgagataaacacaattggaaacaccatcatggagaaatgctgaagtggatcctcaaatttct |
8678225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 391
Target Start/End: Original strand, 8547750 - 8547857
Alignment:
| Q |
280 |
ttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgc |
379 |
Q |
| |
|
|||||||| ||||||| |||||| || | ||||||||| ||||||||||||||||||||| ||| ||| | ||||||||||||||||||| |||| |
|
|
| T |
8547750 |
ttgagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttcttcttcttatcttatgtatcccacttgtgtgaatcgtgc |
8547845 |
T |
|
| Q |
380 |
acttcattggat |
391 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8547846 |
acttcattggat |
8547857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 2844435 - 2844548
Alignment:
| Q |
24 |
aagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggagttca |
123 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||||| ||||| ||||| | |||| ||| |||||||| ||||||||||| ||| |||| |||| |
|
|
| T |
2844435 |
aagtttggcattgtgaattcttgcaatggcttgctttgtttatctgaaacatctatcggaagccctttagtgatttgcaacccagtaacgagggaattca |
2844534 |
T |
|
| Q |
124 |
taagacttcctgaa |
137 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
2844535 |
caatacttcctgaa |
2844548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 400
Target Start/End: Complemental strand, 3380943 - 3380803
Alignment:
| Q |
260 |
ggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtat |
359 |
Q |
| |
|
|||||| |||||||| | ||||||||| |||| | ||||||||||| | ||||||| ||||||||||||||||||||||||||| || || | || |
|
|
| T |
3380943 |
ggtgttcgagcgtgtagtgcttgagatacacacgttcggaacaacatcatagagaaatcttgaagtggatcctcaaatttcttttttgaagcttttgaat |
3380844 |
T |
|
| Q |
360 |
cccacttgtgtgaatggtgcacttcattggataagatttga |
400 |
Q |
| |
|
||||| |||||||| || | |||||||||||| | |||||| |
|
|
| T |
3380843 |
cccacatgtgtgaacggcggacttcattggatcatatttga |
3380803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 8644956 - 8644833
Alignment:
| Q |
20 |
tgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggag |
119 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| || ||||||||| | | |||| | |||| |||||||| || ||||| |||||||| |||||| |
|
|
| T |
8644956 |
tgataagtttggtgttgtgaattcttgcaatggcttgctttgtttgcgtcatccatttgaaggaagaccattagtaatttgcaatccagtcactggggag |
8644857 |
T |
|
| Q |
120 |
ttcataagacttcctgaatctact |
143 |
Q |
| |
|
|| |||||||||||| || ||||| |
|
|
| T |
8644856 |
tttataagacttcctaaagctact |
8644833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 422
Target Start/End: Complemental strand, 8637253 - 8637188
Alignment:
| Q |
357 |
tatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaaaggtcaatattg |
422 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| |||||| ||||||| ||||||| |||||| |
|
|
| T |
8637253 |
tatcccacttgtgtgaatggtacgattcattggatcagatttaagggtcaagaaaggtctatattg |
8637188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 8644787 - 8644747
Alignment:
| Q |
177 |
gctggttttggattccaacctaaaactaatgaatataaggt |
217 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8644787 |
gctgcttttggcttccaacctaaaactaatgaatataaggt |
8644747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 11354043 - 11354082
Alignment:
| Q |
184 |
ttggattccaacctaaaactaatgaatataaggtaataag |
223 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11354043 |
ttggcttccaacctaaaactaatgaatataaggtgataag |
11354082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 11373350 - 11373311
Alignment:
| Q |
184 |
ttggattccaacctaaaactaatgaatataaggtaataag |
223 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11373350 |
ttggcttccaacctaaaactaatgaatataaggtgataag |
11373311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 8678200 - 8678151
Alignment:
| Q |
357 |
tatcccacttgtgtgaatggtgcacttcattggataagatttgagggtca |
406 |
Q |
| |
|
|||||||||||| | |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
8678200 |
tatcccacttgtattaatggtgcgcttcattggatcggatttgagggtca |
8678151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 9004132 - 9004088
Alignment:
| Q |
90 |
ttagtgatctgcaacccagtcacgggggagttcataagacttcct |
134 |
Q |
| |
|
|||||| | |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
9004132 |
ttagtggtatgcaacccagtcactggggaattcataagacttcct |
9004088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 11 - 428
Target Start/End: Complemental strand, 9443833 - 9443416
Alignment:
| Q |
11 |
cagagatattgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtc |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9443833 |
cagagatattgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccaatagtgatctgcaacccagtc |
9443734 |
T |
|
| Q |
111 |
acgggggagttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9443733 |
acgggggagttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaat |
9443634 |
T |
|
| Q |
211 |
ataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctg |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9443633 |
ataaggtaataagcgtgtggataagacatgttaaacaagccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctg |
9443534 |
T |
|
| Q |
311 |
gagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
9443533 |
gagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgaggatgagcaa |
9443434 |
T |
|
| Q |
411 |
aggtcaatattggttttc |
428 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
9443433 |
aggtcaatattggttttc |
9443416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 11 - 428
Target Start/End: Original strand, 48361223 - 48361640
Alignment:
| Q |
11 |
cagagatattgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtc |
110 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
48361223 |
cagagattttgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgatccatctttgggaaacccgttagtgatctgcaacccagtc |
48361322 |
T |
|
| Q |
111 |
acgggggagttcataagacttcctgaatctactacaaatcgaactcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaat |
210 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48361323 |
acaggggagttcataagacttcctgaatctactgcgtatcgaactcgggtaagaatgcaaggacaagctggttttggtttccaacctaaaactaatgaat |
48361422 |
T |
|
| Q |
211 |
ataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctg |
310 |
Q |
| |
|
||||||| |||| | ||||| | ||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
48361423 |
ataaggtgataaacatgtgggtgagacatgttaaacgtgccaatgcgtgggagtttgagcgtgtgatccttgagataaacacacttggaacaccatcctg |
48361522 |
T |
|
| Q |
311 |
gagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaa |
410 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48361523 |
gaggaatgttgaagtggatcctcacatttctttttcgagtctcgagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaa |
48361622 |
T |
|
| Q |
411 |
aggtcaatattggttttc |
428 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
48361623 |
aggtcaatattgtttttc |
48361640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 31 - 421
Target Start/End: Complemental strand, 35780544 - 35780138
Alignment:
| Q |
31 |
atattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaa-cccattagtgatctgcaacccagtcacgggggagttcataagac |
129 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||| | |||| | | ||| ||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
35780544 |
atattgtcaattcttgcaatggtttgctttgtttgtctaatccatataccgaaaaaccctttagtgatttgcaacccagtcacgggggagttcataagac |
35780445 |
T |
|
| Q |
130 |
ttcctgaatctactacaaatc------ga------ac---tcgagtaagaatgcaaggtcaagctggttttggattccaacctaaaactaatgaatataa |
214 |
Q |
| |
|
|||||||| ||||||| | || || || |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
35780444 |
ttcctgaagctactacgactcctttaagattaaatacggatcgagtaagaatgcaaggacaagctggttttggtttccaacctaaaactaatgaatataa |
35780345 |
T |
|
| Q |
215 |
ggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggaga |
314 |
Q |
| |
|
||| |||| | ||||||||||||||| ||| ||||||| | ||||||||||| ||||| ||||| || ||||||||||||||| || |||| |||||| |
|
|
| T |
35780344 |
ggtgataaaaatatggataagacatgttcaacgtgccaatgattgggtgtttgatcgtgttatcctcgaaataaacacacttggagcaccatcatggaga |
35780245 |
T |
|
| Q |
315 |
aatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggataagatttgagggtcagcaaaggt |
414 |
Q |
| |
|
| ||||||||||||||||| |||||| |||| || || ||||||||||||||||||||||||| ||||| ||||| | ||||||||| || |||| || |
|
|
| T |
35780244 |
actgttgaagtggatcctcgtatttctatttcaagccttaagtatcccacttgtgtgaatggtgtgcttcactggatcaaatttgaggggcaacaaaagt |
35780145 |
T |
|
| Q |
415 |
caatatt |
421 |
Q |
| |
|
||||||| |
|
|
| T |
35780144 |
caatatt |
35780138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 391
Target Start/End: Complemental strand, 5131316 - 5131122
Alignment:
| Q |
197 |
taaaactaatgaatataaggtaataagcgtgtggataagacatgttaaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacactt |
296 |
Q |
| |
|
||||||||||||||||||||| |||| | ||| |||| |||||||||| |||| || |||| ||||||||||||||||||||||||| |||| ||| |
|
|
| T |
5131316 |
taaaactaatgaatataaggtgataaaaatatgggtaaggcatgttaaacgtgccgttcgttgggagtttgagcgtgtgatccttgagatacacactctt |
5131217 |
T |
|
| Q |
297 |
ggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcacttcattggat |
391 |
Q |
| |
|
|||||| || |||||||||||||||||||||| ||| |||||| ||||||| || ||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
5131216 |
ggaacattgtcatggagaaatgttgaagtggatcttcagatttctatttcgaggcttgagtgtcctacttgtgtgaatgacacacttcattggat |
5131122 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 26324109 - 26324187
Alignment:
| Q |
242 |
taaacatgccaatcagtgggtgtttgagcgtgtgatccttgagataaacacacttggaacaacatcctggagaaatgtt |
320 |
Q |
| |
|
||||| ||| ||||| ||||| ||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||| |
|
|
| T |
26324109 |
taaacgtgctaatcaatgggtttttgagcgtgtgatccttgggatgaacacacttggaacaccgtcctggagaaatgtt |
26324187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 16717108 - 16716982
Alignment:
| Q |
20 |
tgataagtttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggag |
119 |
Q |
| |
|
|||||||||| ||||||||||||| || ||||| || || ||||||||||| ||| || ||||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
16717108 |
tgataagtttaatattgtgaattcatgtaatggcttgctatgtttgtctgaaccaactactggaaaccctatagtgatctgcaacccattcatgggggaa |
16717009 |
T |
|
| Q |
120 |
ttcataagacttcctgaatctactaca |
146 |
Q |
| |
|
|||||||||||||||||| |||||||| |
|
|
| T |
16717008 |
ttcataagacttcctgaaactactaca |
16716982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 403
Target Start/End: Complemental strand, 16716833 - 16716710
Alignment:
| Q |
280 |
ttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgc |
379 |
Q |
| |
|
|||||||| ||||||| |||||| || | ||||||||| | | ||||||||||||||||| ||||| |||| | | |||||||||||||||||||||| |
|
|
| T |
16716833 |
ttgagatacacacactcggaacaccaacatggagaaatatcaatgtggatcctcaaatttcattttcatgtcttatgaatcccacttgtgtgaatggtgc |
16716734 |
T |
|
| Q |
380 |
acttcattggataagatttgaggg |
403 |
Q |
| |
|
|||||||||| | | ||||||||| |
|
|
| T |
16716733 |
acttcattggttcacatttgaggg |
16716710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 5130 - 5009
Alignment:
| Q |
282 |
gagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggtgcac |
381 |
Q |
| |
|
|||||| ||||||| |||||| || | ||||||||| | | ||||||||||||||||| ||||| |||| | | |||||||||||||||||||||||| |
|
|
| T |
5130 |
gagatacacacactcggaacatcaacatggagaaatatcaatgtggatcctcaaatttcattttcatgtcttatgaatcccacttgtgtgaatggtgcac |
5031 |
T |
|
| Q |
382 |
ttcattggataagatttgaggg |
403 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
5030 |
ttcattggatcagatttgaggg |
5009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 5398 - 5293
Alignment:
| Q |
32 |
tattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcacgggggagttcataagactt |
131 |
Q |
| |
|
|||||||||||| || ||||| || || ||||||||| | ||| || |||||||| |||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
5398 |
tattgtgaattcctgtaatggcttgctatgtttgtctcaaccaactaccggaaaccctttagtgatctgcaacccattcatgggggagttcataagactt |
5299 |
T |
|
| Q |
132 |
cctgaa |
137 |
Q |
| |
|
|||||| |
|
|
| T |
5298 |
cctgaa |
5293 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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