View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17149_high_21 (Length: 239)
Name: NF17149_high_21
Description: NF17149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17149_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31102336 - 31102557
Alignment:
| Q |
1 |
cattggttctacacatgtggaatcgttgttttcaatactaattgaacaatcatcggtatctgatgcagcatcaacatccttatcatcatgacttccattc |
100 |
Q |
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| T |
31102336 |
cattggttctacacatgtggaatcgttgttttcaatactaattgaacaatcatcggtatctgatgcagcatcatcatccttatcatcatgacttccattc |
31102435 |
T |
|
| Q |
101 |
gacattaannnnnnnngtatggacaaatcagcctcctcatgatcatctaaatggggcccttcactgttagaatctccttgttgactcaatttactaattt |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31102436 |
gacattaattttttttgtatggacaaatcagcctcctcatgatcatctaaatggggcccttcactgttagaatctccttgttgactcaatttactaattt |
31102535 |
T |
|
| Q |
201 |
caagatttgcaaatctaacatt |
222 |
Q |
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|||||||||||| ||||||||| |
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| T |
31102536 |
caagatttgcaagtctaacatt |
31102557 |
T |
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