View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17149_low_18 (Length: 287)

Name: NF17149_low_18
Description: NF17149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17149_low_18
NF17149_low_18
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-261)||(39228-39489)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-261)||(29234-29495)
scaffold0076 (1-261)||(34635-34896)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-261)||(173650-173911)
[»] chr7 (23 HSPs)
chr7 (1-261)||(19617122-19617383)
chr7 (1-286)||(38828863-38829148)
chr7 (1-253)||(27565663-27565916)
chr7 (51-265)||(15214301-15214516)
chr7 (96-263)||(13744837-13745004)
chr7 (96-265)||(30820317-30820486)
chr7 (89-262)||(32772155-32772328)
chr7 (96-263)||(36685310-36685477)
chr7 (51-101)||(1856490-1856541)
chr7 (51-101)||(13917662-13917713)
chr7 (51-101)||(16107948-16107999)
chr7 (51-101)||(25926389-25926440)
chr7 (51-101)||(42374394-42374445)
chr7 (55-101)||(13648193-13648240)
chr7 (1-40)||(23443153-23443192)
chr7 (5-55)||(14580734-14580784)
chr7 (51-101)||(11662017-11662068)
chr7 (51-97)||(13256608-13256655)
chr7 (51-101)||(14188383-14188434)
chr7 (5-55)||(45186386-45186436)
chr7 (57-101)||(15727461-15727506)
chr7 (49-101)||(831722-831774)
chr7 (49-101)||(1196902-1196954)
[»] chr3 (33 HSPs)
chr3 (1-261)||(14085358-14085619)
chr3 (1-261)||(14090759-14091020)
chr3 (1-261)||(49400358-49400619)
chr3 (1-286)||(14647068-14647353)
chr3 (1-261)||(24122293-24122553)
chr3 (5-286)||(10988851-10989132)
chr3 (1-261)||(12270518-12270778)
chr3 (1-280)||(19444394-19444676)
chr3 (1-280)||(19450960-19451242)
chr3 (51-265)||(11913544-11913759)
chr3 (48-286)||(30123460-30123699)
chr3 (1-137)||(8579280-8579416)
chr3 (55-265)||(51602617-51602829)
chr3 (96-267)||(50755463-50755634)
chr3 (96-263)||(31224014-31224181)
chr3 (96-286)||(14479645-14479835)
chr3 (96-265)||(13520105-13520274)
chr3 (131-261)||(8582514-8582644)
chr3 (51-101)||(42439-42490)
chr3 (51-101)||(5224234-5224285)
chr3 (51-101)||(15466006-15466057)
chr3 (51-100)||(13437151-13437201)
chr3 (51-101)||(10833395-10833446)
chr3 (1-44)||(14288215-14288258)
chr3 (51-101)||(16324630-16324681)
chr3 (51-101)||(43549745-43549796)
chr3 (57-101)||(17547567-17547612)
chr3 (55-101)||(26054528-26054575)
chr3 (6-44)||(15934136-15934174)
chr3 (6-44)||(15954141-15954179)
chr3 (7-44)||(16822990-16823027)
chr3 (49-101)||(2247738-2247790)
chr3 (5-41)||(13054865-13054901)
[»] chr2 (15 HSPs)
chr2 (1-261)||(6743335-6743596)
chr2 (1-286)||(21132618-21132904)
chr2 (1-261)||(201448-201709)
chr2 (1-261)||(43694228-43694488)
chr2 (51-265)||(10039149-10039364)
chr2 (116-263)||(26861392-26861539)
chr2 (51-101)||(31346031-31346082)
chr2 (5-44)||(25365100-25365139)
chr2 (55-101)||(41301023-41301070)
chr2 (57-101)||(6477332-6477377)
chr2 (162-214)||(13361806-13361858)
chr2 (5-69)||(24669004-24669067)
chr2 (51-101)||(21072778-21072829)
chr2 (1-41)||(17634857-17634898)
chr2 (5-69)||(22795839-22795902)
[»] chr1 (14 HSPs)
chr1 (1-261)||(21542883-21543144)
chr1 (1-261)||(42094979-42095240)
chr1 (1-286)||(2332098-2332382)
chr1 (168-265)||(45496758-45496855)
chr1 (96-148)||(45499234-45499286)
chr1 (1-69)||(21733594-21733660)
chr1 (1-44)||(5381587-5381630)
chr1 (55-101)||(22130119-22130166)
chr1 (51-101)||(28313260-28313311)
chr1 (51-101)||(45574109-45574160)
chr1 (1-41)||(21744773-21744814)
chr1 (5-44)||(31926491-31926530)
chr1 (5-55)||(21699046-21699096)
chr1 (61-101)||(13527814-13527855)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-261)||(46068-46329)
scaffold0028 (1-261)||(51472-51733)
[»] chr8 (18 HSPs)
chr8 (1-261)||(23825967-23826228)
chr8 (1-263)||(44432686-44432949)
chr8 (1-261)||(3698429-3698691)
chr8 (51-265)||(364612-364827)
chr8 (51-265)||(42559543-42559757)
chr8 (48-170)||(21325852-21325974)
chr8 (48-177)||(21321254-21321383)
chr8 (51-170)||(20494438-20494558)
chr8 (96-261)||(26859364-26859529)
chr8 (51-101)||(8413838-8413889)
chr8 (51-101)||(11775625-11775676)
chr8 (51-101)||(14397000-14397051)
chr8 (51-101)||(19882859-19882910)
chr8 (51-101)||(20387399-20387449)
chr8 (55-101)||(25483535-25483582)
chr8 (5-41)||(33089840-33089877)
chr8 (57-101)||(15635191-15635235)
chr8 (5-69)||(21299352-21299415)
[»] chr5 (15 HSPs)
chr5 (1-261)||(1856517-1856777)
chr5 (1-286)||(43242546-43242831)
chr5 (1-261)||(21674487-21674747)
chr5 (1-265)||(22757853-22758119)
chr5 (51-265)||(36460793-36461007)
chr5 (96-265)||(21554460-21554629)
chr5 (96-265)||(21557105-21557274)
chr5 (96-267)||(24830059-24830230)
chr5 (1-80)||(18819804-18819882)
chr5 (51-101)||(18419363-18419414)
chr5 (51-101)||(27868664-27868715)
chr5 (51-101)||(33472653-33472704)
chr5 (1-46)||(10036074-10036119)
chr5 (86-122)||(19077363-19077399)
chr5 (51-101)||(21553477-21553528)
[»] chr6 (20 HSPs)
chr6 (1-286)||(7430325-7430610)
chr6 (1-261)||(14593667-14593928)
chr6 (1-263)||(8759482-8759745)
chr6 (29-286)||(8767257-8767514)
chr6 (51-265)||(1254580-1254795)
chr6 (51-265)||(34296281-34296497)
chr6 (51-193)||(1173-1316)
chr6 (96-263)||(34140687-34140855)
chr6 (96-263)||(34153303-34153471)
chr6 (51-137)||(8188-8275)
chr6 (96-184)||(7680748-7680836)
chr6 (51-101)||(13765258-13765309)
chr6 (51-101)||(23225947-23225998)
chr6 (51-101)||(23956774-23956825)
chr6 (51-101)||(23415816-23415867)
chr6 (51-100)||(27557575-27557625)
chr6 (57-101)||(1588655-1588700)
chr6 (51-98)||(31021810-31021859)
chr6 (5-69)||(14725285-14725348)
chr6 (57-101)||(15816757-15816801)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-265)||(9881-10146)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-265)||(3161-3426)
[»] chr4 (11 HSPs)
chr4 (1-261)||(11201441-11201703)
chr4 (1-261)||(11208172-11208434)
chr4 (51-265)||(56114850-56115065)
chr4 (55-265)||(24046572-24046783)
chr4 (51-101)||(45005856-45005907)
chr4 (1-45)||(35461577-35461622)
chr4 (51-97)||(18230656-18230703)
chr4 (51-101)||(28386155-28386206)
chr4 (165-199)||(16297938-16297972)
chr4 (49-101)||(15747645-15747697)
chr4 (162-214)||(20325814-20325866)
[»] scaffold0077 (2 HSPs)
scaffold0077 (51-263)||(17293-17505)
scaffold0077 (55-265)||(22197-22408)
[»] scaffold0635 (1 HSPs)
scaffold0635 (51-265)||(7706-7921)
[»] scaffold0599 (1 HSPs)
scaffold0599 (51-265)||(820-1035)
[»] scaffold0059 (1 HSPs)
scaffold0059 (96-263)||(49450-49617)
[»] scaffold0026 (3 HSPs)
scaffold0026 (117-286)||(123643-123811)
scaffold0026 (5-64)||(36502-36560)
scaffold0026 (5-84)||(143581-143661)
[»] scaffold0104 (6 HSPs)
scaffold0104 (89-265)||(26749-26925)
scaffold0104 (89-265)||(28131-28307)
scaffold0104 (96-261)||(14677-14842)
scaffold0104 (96-261)||(16697-16862)
scaffold0104 (118-261)||(8046-8189)
scaffold0104 (118-261)||(18717-18860)
[»] scaffold0577 (1 HSPs)
scaffold0577 (95-265)||(8778-8948)
[»] scaffold0379 (1 HSPs)
scaffold0379 (96-262)||(10526-10692)
[»] scaffold1276 (1 HSPs)
scaffold1276 (51-105)||(1047-1102)
[»] scaffold0453 (1 HSPs)
scaffold0453 (51-101)||(7100-7151)
[»] scaffold0278 (1 HSPs)
scaffold0278 (51-101)||(23808-23859)
[»] scaffold0200 (1 HSPs)
scaffold0200 (51-101)||(18505-18556)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-44)||(2097-2140)
[»] scaffold0117 (1 HSPs)
scaffold0117 (51-101)||(42583-42634)
[»] scaffold0058 (1 HSPs)
scaffold0058 (51-101)||(39902-39953)
[»] scaffold0001 (3 HSPs)
scaffold0001 (51-101)||(169351-169402)
scaffold0001 (51-101)||(176704-176755)
scaffold0001 (6-55)||(448848-448897)
[»] scaffold0178 (1 HSPs)
scaffold0178 (2-44)||(26391-26433)
[»] scaffold0334 (1 HSPs)
scaffold0334 (51-98)||(2039-2087)
[»] scaffold2016 (1 HSPs)
scaffold2016 (1-40)||(29-68)
[»] scaffold0422 (1 HSPs)
scaffold0422 (51-101)||(3875-3926)
[»] scaffold0326 (2 HSPs)
scaffold0326 (5-44)||(4569-4608)
scaffold0326 (5-44)||(19751-19790)
[»] scaffold0293 (1 HSPs)
scaffold0293 (51-101)||(19389-19440)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-44)||(13385-13428)
[»] scaffold0151 (1 HSPs)
scaffold0151 (51-101)||(10006-10057)
[»] scaffold0051 (1 HSPs)
scaffold0051 (56-101)||(32054-32100)
[»] scaffold0924 (1 HSPs)
scaffold0924 (6-79)||(3166-3238)
[»] scaffold0007 (1 HSPs)
scaffold0007 (6-55)||(206911-206960)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-80)||(5955-6034)
[»] scaffold0192 (1 HSPs)
scaffold0192 (5-69)||(21776-21839)
[»] scaffold0601 (1 HSPs)
scaffold0601 (162-217)||(4376-4431)
[»] scaffold0091 (2 HSPs)
scaffold0091 (5-44)||(21952-21991)
scaffold0091 (5-44)||(26149-26188)
[»] scaffold1290 (1 HSPs)
scaffold1290 (5-55)||(447-497)
[»] scaffold0555 (1 HSPs)
scaffold0555 (5-55)||(2324-2374)
[»] scaffold0266 (1 HSPs)
scaffold0266 (6-44)||(23954-23992)
[»] scaffold0050 (1 HSPs)
scaffold0050 (5-43)||(13769-13807)
[»] scaffold1783 (1 HSPs)
scaffold1783 (57-101)||(1258-1302)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-44)||(27255-27299)
[»] scaffold0008 (1 HSPs)
scaffold0008 (57-101)||(11505-11549)


Alignment Details
Target: scaffold0106 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 39489 - 39228
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39489 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 39390  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  39389 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 39290  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  39289 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 39228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 230; Significance: 1e-127; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 29234 - 29495
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29234 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 29333  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  29334 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 29433  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29434 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 29495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 34635 - 34896
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34635 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 34734  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  34735 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 34834  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  34835 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 34896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 173650 - 173911
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  173650 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 173749  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  173750 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 173849  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  173850 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 173911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 19617383 - 19617122
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19617383 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 19617284  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  19617283 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 19617184  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  19617183 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 19617122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 38829148 - 38828863
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  38829148 attgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaacc 38829049  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  38829048 atagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 38828949  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| |||  || ||||||||||||||||||| ||| ||||||||| ||||||| ||  | ||||||||||||||    
T  38828948 tggagagtttagggttaagagatggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaattccaatatgtctgatg 38828863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 27565916 - 27565663
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||| |||||| ||||||| |||||||||||    
T  27565916 attgtaattctgattttgatttaacatgtttctggtagaaattggttaatttgggattatgttttgattattgatttttgtatgaaaaagtgtagaaacc 27565817  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27565816 atagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggtttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattt 27565717  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatc 253  Q
    |||||||||||||||| |||  || ||||||||||| ||||||| ||| |||||    
T  27565716 tggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatc 27565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 15214516 - 15214301
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaag-tgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||     
T  15214516 ttgggattaggttttgattattgacttttgaatgaaaaaatgtagaaaccatataattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 15214417  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||||  | ||  | ||||||||||||||||||| ||| |    
T  15214416 ttaacgtttcaatgatagggtaatcatatggtgacgattatggatgattttggagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaa 15214317  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  15214316 aatcgcagaaaaatct 15214301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 96 - 263
Target Start/End: Original strand, 13744837 - 13745004
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||  ||||||| |    
T  13744837 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggttataattatggacg 13744936  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||||||  ||||  | ||||||||||||||||||| ||| |||||||||||||||    
T  13744937 attttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaat 13745004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 96 - 265
Target Start/End: Original strand, 30820317 - 30820486
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||| |    
T  30820317 aaccatagaattgaacggtgaaaagagtggttaaccaggtagggtagtgatggattaacgttttaatgatagggtaatcatacggtgatgattatggacg 30820416  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    ||||||||||||||| |||  ||||  | ||||||| ||||||||||| ||| |||||||||||||||||    
T  30820417 attttggagagtttaaggtcaagaaacggagccaagaaggctcccatggtagaaaatcgcagaaaaatct 30820486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 262
Target Start/End: Complemental strand, 32772328 - 32772155
Alignment:
Q  89 gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgttt 188  Q
    |||||||||||||||||||||| ||| |||||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||| ||| ||||| ||    
T  32772328 gtgtagaaaccatagaattgaacggtgaaaagagtggttaatcggataggttagtgatggattaacgttttaatgatagggtaatcagatgatgatgatt 32772229  T
Q  189 atggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaa 262  Q
    ||| ||||||||||||||||||||||  | ||  | ||||||||||||||||||| ||| |||||||| |||||    
T  32772228 atgaatgattttggagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaaaatcgcaaaaaaa 32772155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 96 - 263
Target Start/End: Original strand, 36685310 - 36685477
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    |||||||||||||||  || ||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| |    
T  36685310 aaccatagaattgaacagtgaaaagagtggttaatcaggtagggtagtgatggattaacgttttaatgatggggtaatcatatggtgatgattatggacg 36685409  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||||||  ||||  | ||||||||||||||| ||| ||| |||||| ||||||||    
T  36685410 attttggagagtttagggtcaagaaacggagccaaggaggctcctatggtagaaaatcgtagaaaaat 36685477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 1856490 - 1856541
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  1856490 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 1856541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 13917662 - 13917713
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13917662 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 13917713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 16107948 - 16107999
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  16107948 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 16107999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 25926389 - 25926440
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  25926389 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 25926440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 42374394 - 42374445
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42374394 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 42374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 13648240 - 13648193
Alignment:
Q  55 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13648240 gattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 13648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23443192 - 23443153
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaa 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23443192 attgtaattctgattttggtttaacatgtttctggtagaa 23443153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 14580734 - 14580784
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    |||||||||||||||||||||| |||| |||||||||||| ||| ||||||    
T  14580734 taattctgattttgatttaacaagtttatggtagaaattgggaattttggg 14580784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 11662068 - 11662017
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||| |||||||    
T  11662068 ttgggattatgttttgattattgatttttgaattgaaaagtgtaaaaaccat 11662017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 13256655 - 13256608
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaa 97  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||    
T  13256655 ttgggattaggttttgattatttatttttgaattgaaaagtgtagaaa 13256608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 14188383 - 14188434
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    |||||||||| |||||||||||| |||||||| ||||| |||||||||||||    
T  14188383 ttgggattagcttttgattattgatttttgaattgaaatgtgtagaaaccat 14188434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 45186436 - 45186386
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  45186436 taattctgattttggtttaacaggtttatggtagaaattgggaattttggg 45186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 15727461 - 15727506
Alignment:
Q  57 ttaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||    
T  15727461 ttaggttttgattatagatttttgaattgaaaagtgtagaaaccat 15727506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 831722 - 831774
Alignment:
Q  49 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  831722 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 831774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 1196902 - 1196954
Alignment:
Q  49 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  1196902 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 1196954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 14085619 - 14085358
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14085619 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 14085520  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  14085519 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 14085420  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14085419 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 14085358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 14091020 - 14090759
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14091020 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 14090921  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  14090920 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 14090821  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14090820 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 14090759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 49400619 - 49400358
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49400619 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 49400520  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49400519 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattt 49400420  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||| |||  || ||||||||||| ||||||| ||| |||||||||||||    
T  49400419 tggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 49400358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 14647068 - 14647353
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  14647068 attgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttggatgaaaaagtgtagaaacc 14647167  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  14647168 atagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 14647267  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| |||  || ||||||||||||||||||| ||| ||||||||| ||||||| ||  ||||||||||||||||    
T  14647268 tggagagtttagggttaagagatggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgtctgatg 14647353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 24122293 - 24122553
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  24122293 attgtaattttgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt-gaatgaaaaagtgtagaaacc 24122391  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24122392 atagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattt 24122491  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||| |||  || ||||||||||| ||||||| ||| |||||||||||||    
T  24122492 tggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 24122553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 286
Target Start/End: Original strand, 10988851 - 10989132
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatag 103  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  10988851 taattctgattttgatttaatatgtttctggtagaaattgggaaatttaagattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatag 10988950  T
Q  104 aattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttgga 203  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  10988951 aattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattttgga 10989050  T
Q  204 gagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||| || |  | ||||||||||||||||||| ||| |||||||| |||||||| ||  ||||||||||||||||    
T  10989051 gagtttagggttaagtaacggagccaaggaggctcccatggtagaaaatcgca-aaaaatctgtaatttcaatatgtctgatg 10989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 12270518 - 12270778
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  12270518 attgtaattctgattttgatttaacatgtttctggtagaaattggggaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaacc 12270617  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  12270618 atagaattgaatggt-aaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 12270716  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||| |||  || |||||||||||  |||||| ||| |||| ||||||||    
T  12270717 tggagagtttagggttaagagatggagccaaggaggtccccatggtagaaaattgcagaaaa 12270778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 19444676 - 19444394
Alignment:
Q  1 attgtaattctgattttg-atttaacatgtttctggtagaaattgagaaa-tttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaa 97  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  19444676 attgtaattctaattttggatttaacatgtttctggtagaaattgggaaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaa 19444577  T
Q  98 ccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgat 197  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  19444576 ccatagaattgaatggtgaaaagagtggttaattaggtaggttagtgatgggttaacgttttaatgatagggtaatcctatggtgatgattatggatgat 19444477  T
Q  198 tttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgt 280  Q
    |||||||||||||||||  |||| || ||||||||||||||||||| ||| |||||| |||||||||| ||  ||||||||||    
T  19444476 tttggagagtttagggtcaagaaatggagccaaggaggctcccatggtagaaaatcgtagaaaaatctgtaatttcaatatgt 19444394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 19451242 - 19450960
Alignment:
Q  1 attgtaattctgattttg-atttaacatgtttctggtagaaattgagaaa-tttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaa 97  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  19451242 attgtaattctaattttggatttaacatgtttctggtagaaattgggaaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaa 19451143  T
Q  98 ccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgat 197  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  19451142 ccatagaattgaatggtgaaaagagtggttaataaggtaggttagtgatgggttaacattttaatgatagggtaatcatatggtgatgattatggatgat 19451043  T
Q  198 tttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgt 280  Q
    |||||||||||||||||  |||| || ||||||||||||||||||| ||| |||||| |||||||||| ||  ||||||||||    
T  19451042 tttggagagtttagggtcaagaaatggagccaaggaggctcccatggtagaaaatcgtagaaaaatctgtaatttcaatatgt 19450960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 11913759 - 11913544
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||     
T  11913759 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 11913660  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||  | ||  | ||||||||||||||||||| ||| |    
T  11913659 ttaacgtttcaatgatagggtaatcatatggtgatgattatggatgattttagagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaa 11913560  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  11913559 aatcgcagaaaaatct 11913544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 48 - 286
Target Start/End: Original strand, 30123460 - 30123699
Alignment:
Q  48 aatttgggattaggttttgattattgg-tttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtga 145  Q
    |||||||||||| |||||||||||||  |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  30123460 aatttgggattaagttttgattattgaatttttgaatgaaaaagtgtagaaaccgtagaattgaatggtgaaaagagtggttaatcaggtaggttagtga 30123559  T
Q  146 tgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgat 245  Q
    ||| ||||  ||||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||| |||||||||||| |    
T  30123560 tggtttaattttttaatgatagtgttatcatatggtgatgattatggatgattttggagagtttagggttaagaaatggagccaatgaggctcccatggt 30123659  T
Q  246 aggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    || ||||||||| ||||||| ||  ||||||||||||||||    
T  30123660 agaaaatcgcag-aaaatctgtattttcaatatgtctgatg 30123699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 8579280 - 8579416
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaa-aagtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  8579280 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattgg-ttttgaatgaagaagtgtagaaacc 8579378  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtag 137  Q
    |||||||||||||||  |||||||||||||||||||||    
T  8579379 atagaattgaatggtggaaagagtggttaatcaggtag 8579416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 265
Target Start/End: Original strand, 51602617 - 51602829
Alignment:
Q  55 gattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaa 153  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| || ||||    
T  51602617 gattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgagggattaa 51602716  T
Q  154 cgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagttt-agggttgagaattgaagccaaggaggctcccatgataggaaat 252  Q
    ||||| | ||||||||||||||||||| || | ||||||||||||||||||||||| |||||  | ||  | ||||||||||||||||||| ||| ||||    
T  51602717 cgtttcaatgatagggtaatcatatggcgaggattatggatgattttggagagttttagggtcaaaaaacggagccaaggaggctcccatggtagaaaat 51602816  T
Q  253 cgcagaaaaatct 265  Q
    || ||||||||||    
T  51602817 cgtagaaaaatct 51602829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 50755463 - 50755634
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||| |||| || |    
T  50755463 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatggattaatgttctaatgatagggtaatcatatggtgatgattattgacg 50755562  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctat 267  Q
    |||||||||||||||||||  |||| || ||||||||||||||||||| ||| |||||||||||||||||||    
T  50755563 attttggagagtttagggtcaagaaatggagccaaggaggctcccatggtagaaaatcgcagaaaaatctat 50755634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 96 - 263
Target Start/End: Original strand, 31224014 - 31224181
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| |    
T  31224014 aaccatagaattgaacggtgaaaagagtggttaatcaggtagggtagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggacg 31224113  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||||||  ||||  | |||||| |||||||||||| ||| |||||||||||||||    
T  31224114 attttggagagtttagggtcaagaaacggagccaatgaggctcccatggtagaaaatcgcagaaaaat 31224181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 96 - 286
Target Start/End: Original strand, 14479645 - 14479835
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||||| || ||||||||||||||||||||| || |||| |||||| |||||||||||||||||||||||| ||||||| |    
T  14479645 aaccatagaattgaacggtgaaaagtgtcgttaatcaggtaggttagtgagggattaatgttttaatgatagggtaatcatatggtgatgattatggacg 14479744  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||||||| ||||  | ||||||||||||||||||| ||| ||||||||||||||||| |  |||||  ||||||||||    
T  14479745 attttggagagtttagggttaagaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaatctgtgacttcagaatgtctgatg 14479835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 96 - 265
Target Start/End: Complemental strand, 13520274 - 13520105
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||| |    
T  13520274 aaccaaagaattgaacggtgaaaagagtggttaattaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 13520175  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||||||||||||  ||||    ||||||||||||||||||| ||| |||||||||||||||||    
T  13520174 attttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaaatcgcagaaaaatct 13520105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 8582514 - 8582644
Alignment:
Q  131 caggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaa 230  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || ||||||    
T  8582514 caggtaggttagtgataggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttaagagatggagccaa 8582613  T
Q  231 ggaggctcccatgataggaaatcgcagaaaa 261  Q
    ||||| ||||||| ||| |||||||||||||    
T  8582614 ggaggttcccatggtagaaaatcgcagaaaa 8582644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 42490 - 42439
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42490 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 42439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 5224285 - 5224234
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  5224285 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 5224234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 15466057 - 15466006
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  15466057 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 15466006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 13437201 - 13437151
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaacca 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  13437201 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaacca 13437151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 10833395 - 10833446
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  10833395 ttgggattaggttttcattattgatttttgaattgaaaagtgtagaaaccat 10833446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14288215 - 14288258
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  14288215 attgtaattctgattttggtttaacatgtttctggaagaaattg 14288258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 16324630 - 16324681
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  16324630 ttgggattaggttttgattattgatttttgaattggaaagtgtagaaaccat 16324681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 43549745 - 43549796
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  43549745 ttgggattaggttttgattattgatttttaaattgaaaagtgtagaaaccat 43549796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 17547567 - 17547612
Alignment:
Q  57 ttaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  17547567 ttaggttttgattattgatttttgaattgaaaagtgtagaaaccat 17547612  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 26054528 - 26054575
Alignment:
Q  55 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  26054528 gattaggttttgattattgatttttgaattgaaaattgtagaaaccat 26054575  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 15934136 - 15934174
Alignment:
Q  6 aattctgattttgatttaacatgtttctggtagaaattg 44  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  15934136 aattctgattttgatttaacaagtttatggtagaaattg 15934174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 15954141 - 15954179
Alignment:
Q  6 aattctgattttgatttaacatgtttctggtagaaattg 44  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  15954141 aattctgattttgatttaacaagtttatggtagaaattg 15954179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 16822990 - 16823027
Alignment:
Q  7 attctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  16822990 attctgattttgatttaacaggtttatggtagaaattg 16823027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 2247738 - 2247790
Alignment:
Q  49 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  2247738 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 2247790  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 13054901 - 13054865
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaa 41  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  13054901 taattctgattttggtttaacatgttcctggtagaaa 13054865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 6743335 - 6743596
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6743335 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 6743434  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  6743435 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 6743534  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  6743535 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 6743596  T

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Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 21132618 - 21132904
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  21132618 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttcggattaggttttgattattgatttttgaatgaaaaagtgtagaaacc 21132717  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  21132718 atagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtgatcatatggtgatgattatggatgattt 21132817  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||  |  ||||||||||||||||    
T  21132818 tggagagtttagggttaagaattggagccaaggaggctcccatggtaggaaatcgcagaaaaatctgcaatttcaatatgtctgatg 21132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 201709 - 201448
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  201709 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 201610  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  201609 ataaaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 201510  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  201509 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 201448  T

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Target: chr2; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 43694488 - 43694228
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  43694488 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt-gaatgaaaaagtgtagaaacc 43694390  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43694389 atagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattt 43694290  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||| |||  || ||||||||||| ||||||| ||| |||||| ||||||    
T  43694289 tggagagtttagggttaagagatggagccaaggaggttcccatggtagaaaatcgtagaaaa 43694228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 51 - 265
Target Start/End: Original strand, 10039149 - 10039364
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||     
T  10039149 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatgga 10039248  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||  | ||||||||||||||||||| ||| |    
T  10039249 ttaacgttttaatgatagggtaatcatatggtgatgattatggattattttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaa 10039348  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  10039349 aatcgcagaaaaatct 10039364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 263
Target Start/End: Original strand, 26861392 - 26861539
Alignment:
Q  116 aaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggtt 215  Q
    |||||||||| ||||| ||||||||| ||| |  |||| ||| ||  ||||||||||| ||||||||| | ||| | |||||||||| || ||||| ||     
T  26861392 aaaagagtggataatctggtaggttaatgaagaattaatgttctaacgatagggtaataatatggtgaagattaggtatgattttggtgaatttagagta 26861491  T
Q  216 gagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    || ||  | ||||||||||||||||||| ||| |||||||||||||||    
T  26861492 gaaaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaat 26861539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 31346082 - 31346031
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  31346082 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 31346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 25365100 - 25365139
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  25365100 taattctgattttggtttaacatgtttctggtagaaattg 25365139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 41301023 - 41301070
Alignment:
Q  55 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  41301023 gattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 41301070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 6477332 - 6477377
Alignment:
Q  57 ttaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  6477332 ttaggttttgattattgatttttgaattgaaaagtgtagaaaccat 6477377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 13361858 - 13361806
Alignment:
Q  162 tgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggt 214  Q
    |||||||||||||||||||||||| ||| |||  ||||||| |||||||||||    
T  13361858 tgatagggtaatcatatggtgatgattagggacaattttggcgagtttagggt 13361806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 24669004 - 24669067
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 69  Q
    |||||||||||||| ||||||| ||||||||||||||||| | |||||||| |||| || |||||    
T  24669004 taattctgattttggtttaacaggtttctggtagaaattg-ggaatttgggtttagattatgatt 24669067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 21072778 - 21072829
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    |||||||||| |||||||||||| |||||||| ||||||||||| |||||||    
T  21072778 ttgggattagattttgattattgatttttgaattgaaaagtgtaaaaaccat 21072829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17634898 - 17634857
Alignment:
Q  1 attgtaattctgattttg-atttaacatgtttctggtagaaa 41  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  17634898 attgtaattctgattttggatttaacatgtttttggtagaaa 17634857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 22795839 - 22795902
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 69  Q
    |||||||||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  22795839 taattctgattttggtttaacctagttctggtagaaattg-ggaatttgggtctaggttttgatt 22795902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 21543144 - 21542883
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21543144 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 21543045  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  21543044 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 21542945  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21542944 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 21542883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 42094979 - 42095240
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42094979 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 42095078  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  42095079 atagaattgaatggtgaaaagagttgttaatcaggtaggtttgtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 42095178  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  42095179 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaattgcagaaaa 42095240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 2332098 - 2332382
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  2332098 attgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttt-gaatgaaaaagtgtagaaacc 2332196  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||| |||||||||||||    
T  2332197 atataattgaatggtgaaaagagtggttaatcaggtagattagtgatgggttaacgttctaatgatagggtaatcacatggtgatgattatggatgattt 2332296  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| |||  || ||||||||||||||||||| ||| ||||||||| ||||| | ||  ||||||||||||||||    
T  2332297 tggagagtttagggttaagagatggagccaaggaggctcccatggtagaaaatcgcag-aaaatatgtaatttcaatatgtctgatg 2332382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 45496855 - 45496758
Alignment:
Q  168 ggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||  ||||  | ||||||||||||| ||||  ||| |||||||||||||||||    
T  45496855 ggtaatcatatggtgatgattatggacgattttggagagtttagagtcaagaaacggagccaaggaggcttccatagtagaaaatcgcagaaaaatct 45496758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 45499286 - 45499234
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgg 148  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  45499286 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatgg 45499234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21733594 - 21733660
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 69  Q
    |||||||||||||||||| |||||||||||| |||||||||||| | |||||||| |||| ||||||||    
T  21733594 attgtaattctgattttggtttaacatgtttatggtagaaattg-ggaatttggg-ttagattttgatt 21733660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5381630 - 5381587
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  5381630 attgtaattctgattttggtttaacatgtttctggttgaaattg 5381587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 22130119 - 22130166
Alignment:
Q  55 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  22130119 gattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 22130166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 28313311 - 28313260
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  28313311 ttgggattaggttttgattattgatttttgaattgaaaagtgtaaaaaccat 28313260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 45574109 - 45574160
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  45574109 ttgggattaggttttgattattgatttttgaattgaaaagtgcagaaaccat 45574160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21744773 - 21744814
Alignment:
Q  1 attgtaattctgattttg-atttaacatgtttctggtagaaa 41  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  21744773 attgtaattctgattttggatttaacatgtttctggtagaaa 21744814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 31926491 - 31926530
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  31926491 taattctgattttgatttaacaggtttatggtagaaattg 31926530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 21699096 - 21699046
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  21699096 taattctgattttggtttaacaggtttatggtagaaattgggaattttggg 21699046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 13527814 - 13527855
Alignment:
Q  61 gttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  13527814 gttttgattattgatttttgaattgaaaagtgtagaaaccat 13527855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 222; Significance: 1e-122; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 46068 - 46329
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46068 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 46167  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  46168 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 46267  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||    
T  46268 tggagagtttagggttgagaattggagccaaggaggttcccatggtagaaaatcgcagaaaa 46329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 51472 - 51733
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51472 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 51571  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  51572 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 51671  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||||||    
T  51672 tggagagtttagggttgagaattggagccaaggaggttcccatggtagaaaatcgcagaaaa 51733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 23826228 - 23825967
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  23826228 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttaggattaggttttgattattggtttttgaatgaaaaagtgtagaaacc 23826129  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  23826128 atagaattgaatggtgaaaagagttgttaatcaggtaggttagtgatgagttaacgttttaatgatagggtaatcatacggtgatgtttatggatgattt 23826029  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  23826028 tggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaa 23825967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 44432949 - 44432686
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| || ||||||||    
T  44432949 attgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgagattaggttttgattattgatttttgaatgaaaaagtatagaaacc 44432850  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  44432849 atagaattgaatggtgaaaagagtggttaatcaagtaagttagtgatgggttaacgttttaatgatagtgtaatcatatggtgatgattatggatgattt 44432750  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||| |||| || ||||||||||||||||||| ||| |||||||||||||||    
T  44432749 tggagagtttagggttaagaaatggagccaaggaggctcccatggtagaaaatcgcagaaaaat 44432686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 3698691 - 3698429
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt-gaatgaaaa-gtgtagaaac 98  Q
    ||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  3698691 attgtaattctgattttgatttaacatgtttctggtataaattggagaatttgggattaggttttgattattgattttttgaatgaaaaagtgtagaaac 3698592  T
Q  99 catagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgatt 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  3698591 catagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtaatgattatggatgatt 3698492  T
Q  199 ttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    ||||||||||||||||| |||  || ||||||||||| ||| ||| ||| |||||||||||||    
T  3698491 ttggagagtttagggttaagagatggagccaaggaggttccaatggtagaaaatcgcagaaaa 3698429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 364827 - 364612
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||     
T  364827 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatgga 364728  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| || |||||| |||||||||||| ||| |    
T  364727 ttaacgttttaatgatagggtaatcatatcgtgatgattatggatgattttggagagtttagggttaagaaatggagccaaagaggctcccatggtagaa 364628  T
Q  250 aatcgcagaaaaatct 265  Q
    |||| |||||||||||    
T  364627 aatcacagaaaaatct 364612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 51 - 265
Target Start/End: Original strand, 42559543 - 42559757
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||     
T  42559543 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatataattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 42559642  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||  | ||  | ||||||||||||||||||| || ||    
T  42559643 ttaacgtttcaatgatagggtaatcgtatggtgatgattatggatgattttggagagtttagggtcaaaaaacggagccaaggaggctcccatggta-ga 42559741  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  42559742 aatcgcagaaaaatct 42559757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 21325852 - 21325974
Alignment:
Q  48 aatttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatg 147  Q
    |||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  21325852 aattagggtttaggttttgaatattgatttttgaatgaaaagtgtagaaaccatagaattgaatggtgaaaagagtggttaatcaggtaggttggtgatg 21325951  T
Q  148 ggttaacgttttattgatagggt 170  Q
    | ||||| ||||| |||||||||    
T  21325952 gattaacattttaatgatagggt 21325974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 21321254 - 21321383
Alignment:
Q  48 aatttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatg 147  Q
    |||| ||| |||| |||||| ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  21321254 aattagggtttagattttgaatattgatttttgaatgaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgatg 21321353  T
Q  148 ggttaacgttttattgatagggtaatcata 177  Q
    | ||||| ||||| ||||||||| ||||||    
T  21321354 gattaacattttaatgatagggtgatcata 21321383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 170
Target Start/End: Original strand, 20494438 - 20494558
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||     
T  20494438 ttgggattaggttttaattattgatttttgaatgaaaaagtgtagaaactatagaattgaacggtgaaaagagtggttaatcatgtaggttagtgatgga 20494537  T
Q  150 ttaacgttttattgatagggt 170  Q
    ||||||||||| |||||||||    
T  20494538 ttaacgttttaatgatagggt 20494558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 261
Target Start/End: Original strand, 26859364 - 26859529
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    |||||||||| |||| ||| |||||||||| ||||| ||||||||| ||| |  ||   ||| || |||||||| ||||||||||||||| ||| ||| |    
T  26859364 aaccatagaactgaacggtgaaaagagtggataatcgggtaggttaatgaagaattggtgttctaatgatagggaaatcatatggtgatgattagggacg 26859463  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    ||||||| |||||||||||  ||||  | ||| ||||||||||||||| | | |||| ||||||||    
T  26859464 attttggtgagtttagggtccagaaacggagcaaaggaggctcccatggtggaaaattgcagaaaa 26859529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 8413838 - 8413889
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8413838 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 8413889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 11775676 - 11775625
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  11775676 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 11775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 14397000 - 14397051
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  14397000 ttgggattaggttttgattattgattttttaattgaaaagtgtagaaaccat 14397051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 19882910 - 19882859
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  19882910 ttgggattaggttttaattattgatttttgaattgaaaagtgtagaaaccat 19882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 20387449 - 20387399
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaat-gaaaagtgtagaaaccat 101  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  20387449 ttgggattaggttttg-ttattgatttttgaattgaaaagtgtagaaaccat 20387399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 25483535 - 25483582
Alignment:
Q  55 gattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  25483535 gattatgttttgattattgatttttgaattgaaaagtgtagaaaccat 25483582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 33089877 - 33089840
Alignment:
Q  5 taattctgattttg-atttaacatgtttctggtagaaa 41  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33089877 taattctgattttggatttaacatgtttctggtagaaa 33089840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 15635191 - 15635235
Alignment:
Q  57 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  15635191 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 15635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 21299352 - 21299415
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 69  Q
    |||||||||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  21299352 taattctgattttggtttaacctagttctggtagaaattg-ggaatttgggtctaggttttgatt 21299415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1856517 - 1856777
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1856517 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt-gaatgaaaaagtgtagaaacc 1856615  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1856616 atagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattt 1856715  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    ||||||||||||||||||||  || ||||||||||| ||||||| ||| |||||||||||||    
T  1856716 tggagagtttagggttgagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 1856777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 43242546 - 43242831
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  43242546 attgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaacc 43242645  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  43242646 atataattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagagtaatcatatggtgatgattatggatgattt 43242745  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| ||||  | ||||||||||||||||||| ||| ||||||||| ||||||| ||  ||||||||||||||||    
T  43242746 tggagagtttagggttaagaaacggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgtctgatg 43242831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 21674487 - 21674747
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  21674487 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttt-gaatgaaaaagtgtagaaacc 21674585  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21674586 atagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgattt 21674685  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||  |||  || ||||||||||| ||||||| ||| |||||||||||||    
T  21674686 tggagagtttagggtaaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaa 21674747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 22757853 - 22758119
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt-gaatgaaaa-gtgtagaaac 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  22757853 attgtaattctgattttgatttaacatgtttctggtagaaattgaaaaatttgggattaggttttgattattgattttttgaatgaaaaagtgtagaaac 22757952  T
Q  99 catagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgatt 198  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  22757953 catagaattgaatggtgaaaagagtggttaatcaggtaagttagtgatgggttaacgttttaatgatagggtaatcatagggtgatgattatggatgatt 22758052  T
Q  199 ttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||| |||||| |||  || ||||||||||| ||||||| ||| |||||||||||||||||    
T  22758053 ttggagagttgagggttaagagatggagccaaggaggttcccatggtagaaaatcgcagaaaaatct 22758119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 36461007 - 36460793
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggt 150  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||| |||||||||||||||| |    
T  36461007 ttgggattaggttttgattattgacttttgaatgaaaagtgtagaaaccatataatggaacggtgaaaagagtggttaatcgggtaggttagtgatggat 36460908  T
Q  151 taacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaa 250  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||  | || |||||||||||||||| ||| ||    
T  36460907 taacgtttcaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggttaaaaaacggagtcaaggaggctcccatggtagaaa 36460808  T
Q  251 atcgcagaaaaatct 265  Q
    |||||||||||||||    
T  36460807 atcgcagaaaaatct 36460793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 265
Target Start/End: Original strand, 21554460 - 21554629
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| |    
T  21554460 aaccatagaattgaaaggtgaaaagagtggttaatcaggtagggtagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggacg 21554559  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||||||||| ||  ||||    ||||||||||||||||||| ||| |||||||||||||||||    
T  21554560 attttggagagtttagagtcaagaaacagagccaaggaggctcccatggtagaaaatcgcagaaaaatct 21554629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 96 - 265
Target Start/End: Original strand, 21557105 - 21557274
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||| || |||||||| |||||||||||||||||||||||| ||||||| |    
T  21557105 aaccatagaattgaacggtgaaaagagtgtttaatcaggtagggtagtgatggattgacgttttaatgatagggtaatcatatggtgatgattatggacg 21557204  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||||||||||||  ||||  | ||||||||||||||||||| ||| |||||||||||||||||    
T  21557205 attttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaatct 21557274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 24830059 - 24830230
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||| ||||||| | | |||||||||||||||||||||||||||||| || |||| ||| || |||||||||||||||||||||||| ||||||| |    
T  24830059 aaccatataattgaacgttgaaaagagtggttaatcaggtaggttagtgagggattaatgttctaatgatagggtaatcatatggtgatgattatggacg 24830158  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctat 267  Q
    |||||||||| ||||||||  ||||  | ||||||||||||||||||| ||| |||| ||||||||||||||    
T  24830159 attttggagattttagggtcaagaaacggagccaaggaggctcccatggtagaaaattgcagaaaaatctat 24830230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18819882 - 18819804
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt-attggtttttg 80  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| ||||||  || |||| |||||||| |||||||||||    
T  18819882 attgtaattctgaatttggtttaacatgtttctggtagaaattgggaaatt--gggttagattttgattcattggtttttg 18819804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 18419414 - 18419363
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  18419414 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 18419363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 27868664 - 27868715
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27868664 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 27868715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 33472653 - 33472704
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  33472653 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 33472704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10036119 - 10036074
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgag 46  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||    
T  10036119 attgtaattctgattttggtttaacaggtttatggtagaaattgag 10036074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 19077399 - 19077363
Alignment:
Q  86 aaagtgtagaaaccatagaattgaatggttaaaagag 122  Q
    ||||||||||||||||||||||||||||| |||||||    
T  19077399 aaagtgtagaaaccatagaattgaatggtgaaaagag 19077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 21553477 - 21553528
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||    
T  21553477 ttgggtttaggttttgatcattgatttttgaattgaaaagtgtagaaaccat 21553528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 7430610 - 7430325
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  7430610 attgtaatcctgattttgatttaacatgtttctggtagaaattgggaaatttgtgattaagttttgattattgatttttgaatgaaaaagtgtagaaacc 7430511  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  7430510 atagaattgaatggtggaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 7430411  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| ||||  | ||||||||||||||||||| ||| ||||||||| ||||||| ||| |||| |||||||||||    
T  7430410 tggagagtttagggttaagaaacggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtactttcagtatgtctgatg 7430325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 14593667 - 14593928
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  14593667 attgtaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaagttttgattattgatttttgaatgaaaaagtgtagaaacc 14593766  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  14593767 atataattgaatggtgtaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 14593866  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||| |||| || ||||||||||| ||||||| ||| |||||||||||||    
T  14593867 tggagagtttagggttaagaaatggagccaaggaggttcccatggtagaaaatcgcagaaaa 14593928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 8759482 - 8759745
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8759482 attgaaattctgattttgatttaacatgtttctggtagaaattgggaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaacc 8759581  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||    
T  8759582 atataattgaatggtgaaaagagtggttaatcaggtatgttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatcaatgattt 8759681  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||| | ||  | ||||||||||||||||||| ||| |||||||||||||||    
T  8759682 tggagagtttagggttaacaaacggagccaaggaggctcccatggtagaaaatcgcagaaaaat 8759745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 29 - 286
Target Start/End: Original strand, 8767257 - 8767514
Alignment:
Q  29 tttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggtt 127  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  8767257 tttctagtagaaattgggaaatttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaatggtgaaaagagtggtt 8767356  T
Q  128 aatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagc 227  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||  | |||    
T  8767357 aatcaggtatgttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattttagagagtttagggttaagaaacggagc 8767456  T
Q  228 caaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    |||||||||||||||| ||| ||||||||| ||||||| ||  ||||||||||||||||    
T  8767457 caaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgtctgatg 8767514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 1254795 - 1254580
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||     
T  1254795 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 1254696  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    |||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||  | ||||||||| ||||||||| ||| |    
T  1254695 ttaatgtttcaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtcaaaaaacggagccaaggatgctcccatggtagaa 1254596  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  1254595 aatcgcagaaaaatct 1254580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 265
Target Start/End: Original strand, 34296281 - 34296497
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||     
T  34296281 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 34296380  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggt-tgagaattgaagccaaggaggctcccatgatagg 248  Q
    ||||| ||| | |||||||||||||||||||| | | ||||||||||||||||||| |||| |||   | ||  | ||||||||||||||||||| |||     
T  34296381 ttaacatttcaatgatagggtaatcatatggtaaggattatggatgattttggagaatttaaggtcaaaaaaacgcagccaaggaggctcccatggtaga 34296480  T
Q  249 aaatcgcagaaaaatct 265  Q
    |||||||||||||||||    
T  34296481 aaatcgcagaaaaatct 34296497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 1316 - 1173
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||     
T  1316 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtagcttagtgatgga 1217  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatgga 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||    
T  1216 ttaacgttttaatgatagggtaatcatatggtgatgattatgga 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 96 - 263
Target Start/End: Original strand, 34140687 - 34140855
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||||||||| || |||||||| || |||||||||||||||||||||||  ||||||| |    
T  34140687 aaccatagaattgaacggtgaaatgagtggttaattaggtaggttagtgagggattaacgttctaatgatagggtaatcatatggtgataattatggacg 34140786  T
Q  196 attttggagagtttaggg-ttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||||| |  ||||  | ||||||||||||||||||| ||| |||||||| ||||||    
T  34140787 attttggagagtttagggctcaagaaacggagccaaggaggctcccatggtagaaaatcgcaaaaaaat 34140855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 96 - 263
Target Start/End: Original strand, 34153303 - 34153471
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||||||||| || |||||||| || |||||||||||||||||||||||  ||||||| |    
T  34153303 aaccatagaattgaacggtgaaatgagtggttaattaggtaggttagtgagggattaacgttctaatgatagggtaatcatatggtgataattatggacg 34153402  T
Q  196 attttggagagtttaggg-ttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||||| |  ||||  | ||||||||||||||||||| ||| |||||||| ||||||    
T  34153403 attttggagagtttagggctcaagaaacggagccaaggaggctcccatggtagaaaatcgcaaaaaaat 34153471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 8275 - 8188
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtag 137  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  8275 ttgggattaggttttgattattgacttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtag 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 7680748 - 7680836
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgat 184  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||| || |||| ||| || |||||||||||||||||||||||    
T  7680748 aaccatagaattgaacagtgaaaagagtggttaatcaggtaggttagtgagggattaatgttctaatgatagggtaatcatatggtgat 7680836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 13765309 - 13765258
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13765309 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 13765258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 23225947 - 23225998
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23225947 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 23225998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 23956825 - 23956774
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23956825 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 23956774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 23415867 - 23415816
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  23415867 ttgggattaggttttgattattgatttttgaattgaaaagcgtagaaaccat 23415816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 27557625 - 27557575
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaacca 100  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  27557625 ttgggattatgttttgattattgatttttgaattgaaaagtgtagaaacca 27557575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 1588700 - 1588655
Alignment:
Q  57 ttaggttttgattattggtttttgaat-gaaaagtgtagaaaccat 101  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  1588700 ttaggttttgattatagatttttgaattgaaaagtgtagaaaccat 1588655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 31021810 - 31021859
Alignment:
Q  51 ttgggattaggttttgattattg-gtttttgaa-tgaaaagtgtagaaac 98  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  31021810 ttgggattaggttttgattattgattttttgaattgaaaagtgtagaaac 31021859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 14725348 - 14725285
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 69  Q
    |||||||||||||| |||||| |  ||||||||||||||| | ||||||||  ||||||||||||    
T  14725348 taattctgattttggtttaacctagttctggtagaaattgtg-aatttgggtctaggttttgatt 14725285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 15816757 - 15816801
Alignment:
Q  57 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  15816757 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 15816801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 9881 - 10146
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||||||||| |    
T  9881 attgtaattctgattttgatttaacatgtttctagtagaaattgggaaatttggaattaggttttgattattgatttttgaatgaaaaagtgtagaaaac 9980  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  9981 atagaattgaacggtgaaaagagtggttgatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 10080  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||||||||| |||| |  ||||||||||||||||||| ||| |||||||||||||||||    
T  10081 tggagagtttagggttaagaaatcgagccaaggaggctcccatggtagaaaatcgcagaaaaatct 10146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 3426 - 3161
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaacc 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||||||||| |    
T  3426 attgtaattctgattttgatttaacatgtttctagtagaaattgggaaatttggaattaggttttgattattgatttttgaatgaaaaagtgtagaaaac 3327  T
Q  100 atagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattt 199  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  3326 atagaattgaacggtgaaaagagtggttgatcaggtaggttagtgatggattaacgttttaatgatagggtaatcatatggtgatgattatggatgattt 3227  T
Q  200 tggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    |||||||||||||||| |||| |  ||||||||||||||||||| ||| |||||||||||||||||    
T  3226 tggagagtttagggttaagaaatcgagccaaggaggctcccatggtagaaaatcgcagaaaaatct 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 5e-99; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 11201441 - 11201703
Alignment:
Q  1 attgtaattctgattttg-atttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaac 98  Q
    |||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  11201441 attgtaattctgattttggatttaacatgtttctggtagaaattggagaatttgggattaagttttgattattgatttttggatgaaaaagtgtagaaac 11201540  T
Q  99 catagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgatt 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11201541 catagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgatt 11201640  T
Q  199 ttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    ||||||||||||||||| |||  || ||| ||||||| ||||||| ||| |||||||||||||    
T  11201641 ttggagagtttagggttaagagatggagcaaaggaggttcccatggtagaaaatcgcagaaaa 11201703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 11208172 - 11208434
Alignment:
Q  1 attgtaattctgattttg-atttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaac 98  Q
    |||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  11208172 attgtaattctgattttggatttaacatgtttctggtagaaattggagaatttgggattaagttttgattattgatttttggatgaaaaagtgtagaaac 11208271  T
Q  99 catagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgatt 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11208272 catagaattgaatggtgaaaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgtttatggatgatt 11208371  T
Q  199 ttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    ||||||||||||||||| |||  || ||| ||||||| ||||||| ||| |||||||||||||    
T  11208372 ttggagagtttagggttaagagatggagcaaaggaggttcccatggtagaaaatcgcagaaaa 11208434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 51 - 265
Target Start/End: Original strand, 56114850 - 56115065
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||||     
T  56114850 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtggaaagagtggttaatcagttaggttagtgatgga 56114949  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||| |    
T  56114950 ttaacgttttaatgatagagtaatcatatggtgatgattatggatgattttggagagtttagggttaagaaatggagccaaggaggctcccatggtagaa 56115049  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  56115050 aatcgcagaaaaatct 56115065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 55 - 265
Target Start/End: Original strand, 24046572 - 24046783
Alignment:
Q  55 gattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaa 153  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||    
T  24046572 gattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagagatggattaa 24046671  T
Q  154 cgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatc 253  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||    ||||||||||||||||||| ||| |||||    
T  24046672 cgttttaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaaatc 24046771  T
Q  254 gcagaaaaatct 265  Q
    ||||||||||||    
T  24046772 gcagaaaaatct 24046783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 45005907 - 45005856
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  45005907 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 45005856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35461577 - 35461622
Alignment:
Q  1 attgtaattctgatttt-gatttaacatgtttctggtagaaattga 45  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  35461577 attgtaattctgatttttgatttaacatgtttctggtagaaattga 35461622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 18230703 - 18230656
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaa 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  18230703 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaa 18230656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 28386206 - 28386155
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  28386206 ttgggattatgttttgattattgatttttgaattgaaaagtgtagaaaccat 28386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 16297938 - 16297972
Alignment:
Q  165 tagggtaatcatatggtgatgtttatggatgattt 199  Q
    |||||||||| ||||||||||||||||||||||||    
T  16297938 tagggtaatcttatggtgatgtttatggatgattt 16297972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 15747645 - 15747697
Alignment:
Q  49 atttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||| |||||||||||| ||| | ||||||||  ||||||||||||||||    
T  15747645 atttggggttaggttttgatcattagattttgaattgaaagtgtagaaaccat 15747697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 20325866 - 20325814
Alignment:
Q  162 tgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggt 214  Q
    ||||||||||| | ||||||||||||||||||| |||| || |||||| ||||    
T  20325866 tgatagggtaaccttatggtgatgtttatggataatttgggtgagtttggggt 20325814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 51 - 263
Target Start/End: Original strand, 17293 - 17505
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaagtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggt 150  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |    
T  17293 ttgggattaggttttgattattgatttttgaatgaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagagatggat 17392  T
Q  151 taacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaa 250  Q
    ||| |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||  | ||||||||||||||||||| ||| ||    
T  17393 taaagttttaatgatagggtaatcatatggtgatgattatgaatgattttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaaa 17492  T
Q  251 atcgcagaaaaat 263  Q
    |||||||||||||    
T  17493 atcgcagaaaaat 17505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 55 - 265
Target Start/End: Original strand, 22197 - 22408
Alignment:
Q  55 gattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaa 153  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||| ||||    
T  22197 gattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaaaggtgaaaagagtggttaatcaggtaggatagagatggattaa 22296  T
Q  154 cgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatc 253  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||    ||||||||||||||||||| ||  |||||    
T  22297 cgttttaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtcaagaaacagagccaaggaggctcccatggtataaaatc 22396  T
Q  254 gcagaaaaatct 265  Q
    ||||||||||||    
T  22397 gcagaaaaatct 22408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 7921 - 7706
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||     
T  7921 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatgga 7822  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||  | ||||||||||||||||||| ||| |    
T  7821 ttaacgttttaatgatagggtaatcatatggtgatgattatggattattttggagagtttagggtcaagaaacggagccaaggaggctcccatggtagaa 7722  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  7721 aatcgcagaaaaatct 7706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 51 - 265
Target Start/End: Complemental strand, 1035 - 820
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaatgaaaa-gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatggg 149  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||     
T  1035 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatgga 936  T
Q  150 ttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgatagga 249  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||  | ||  | ||||||||||||||||||| ||| |    
T  935 ttaacgtttcaatgatagggtaatcatatggtgatgattatggatgattttagagagtttagggtcaaaaaacggagccaaggaggctcccatggtagaa 836  T
Q  250 aatcgcagaaaaatct 265  Q
    ||||||||||||||||    
T  835 aatcgcagaaaaatct 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 96 - 263
Target Start/End: Complemental strand, 49617 - 49450
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||| ||||||| |    
T  49617 aaccatagaattgaacggtgaaaagagtggttaatcaggtaggttagtgagggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 49518  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaat 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  49517 attttggagagtttagggttgagaattgaagccaaggaggctcccatggtagaaaatcgcagaaaaat 49450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 117 - 286
Target Start/End: Original strand, 123643 - 123811
Alignment:
Q  117 aaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttg 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  123643 aaagagtggttaatcaggtaggttagtgatgggttaacgttttaatgatagggtaatcatatggtgatgattatggatgattttggagagtttagggtta 123742  T
Q  217 agaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatctataccttcaatatgtctgatg 286  Q
    ||||  | ||||||||||||||||||| ||| ||||||||| ||||||| ||  ||||||||||||||||    
T  123743 agaaacggagccaaggaggctcccatggtagaaaatcgcag-aaaatctgtaatttcaatatgtctgatg 123811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 36560 - 36502
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttt 64  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||    
T  36560 taattctgattttggtttaacatgtttctggtagaaattg-ggaatttgggtttaggttt 36502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 143661 - 143581
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattgg-tttttgaatg 84  Q
    |||||||||||||| ||||||||| |||||||||||| |  | ||||| ||  |||||||||||| |||| ||||||||||    
T  143661 taattctgattttggtttaacatggttctggtagaaaattgggaatttaggtctaggttttgattcttggatttttgaatg 143581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 105; Significance: 2e-52; HSPs: 6)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 89 - 265
Target Start/End: Complemental strand, 26925 - 26749
Alignment:
Q  89 gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgttt 188  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||| ||||| ||    
T  26925 gtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatggattaacgttttaatgatagggtaatcagatgatgatgatt 26826  T
Q  189 atggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    ||||||||||||||||||||||||||  ||||    |||||||||||||| |||| ||| |||||||||||| ||||    
T  26825 atggatgattttggagagtttagggtcaagaaacagagccaaggaggctctcatggtagaaaatcgcagaaatatct 26749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 89 - 265
Target Start/End: Complemental strand, 28307 - 28131
Alignment:
Q  89 gtgtagaaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgttt 188  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||| ||||| ||    
T  28307 gtgtagaaaccatagaattgaacggtgaaaagagtggttaatcgggtaggttagtgatggattaacgttttaatgatagggtaatcagatgatgatgatt 28208  T
Q  189 atggatgattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    ||||||||||||||||||||||||||  ||||    |||||||||||||| |||| ||| |||||||||||| ||||    
T  28207 atggatgattttggagagtttagggtcaagaaacagagccaaggaggctctcatggtagaaaatcgcagaaatatct 28131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 14842 - 14677
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||| |    
T  14842 aaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 14743  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||  ||||    ||||||||||||||||||| ||| || ||||||||||    
T  14742 attttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaattcgcagaaaa 14677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 96 - 261
Target Start/End: Complemental strand, 16862 - 16697
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||||| |    
T  16862 aaccatagaattgaacggggaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggacg 16763  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||||||||||||||||||  ||||    ||||||||||||||||||| ||| || ||||||||||    
T  16762 attttggagagtttagggtcaagaaacagagccaaggaggctcccatggtagaaattcgcagaaaa 16697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 8189 - 8046
Alignment:
Q  118 aagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttga 217  Q
    ||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |    
T  8189 aagagtgattaatcaggtaggttagtgatggattaacattctaatgatagggtaatcatatggtgatgattatggacgattttggagagtttagggtcaa 8090  T
Q  218 gaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||    ||||||||||||||||||| ||| |||||||||||||    
T  8089 gaaacagagccaaggaggctcccatggtagaaaatcgcagaaaa 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 261
Target Start/End: Complemental strand, 18860 - 18717
Alignment:
Q  118 aagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttga 217  Q
    ||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |    
T  18860 aagagtgattaatcaggtaggttagtgatggattaacattctaatgatagggtaatcatatggtgatgattatggacgattttggagagtttagggtcaa 18761  T
Q  218 gaattgaagccaaggaggctcccatgataggaaatcgcagaaaa 261  Q
    |||    ||||||||||||||||||| ||| || ||||||||||    
T  18760 gaaacagagccaaggaggctcccatggtagaaattcgcagaaaa 18717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 95 - 265
Target Start/End: Complemental strand, 8948 - 8778
Alignment:
Q  95 aaaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggat 194  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||| ||||||||| | |||||||||||||||||||||||| |||||||     
T  8948 aaaccatagaattgaacggtgaaaagagtggttaatcaggtagggtagcgatggattaacgtttaaatgatagggtaatcatatggtgatgattatggac 8849  T
Q  195 gattttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaatct 265  Q
    ||||||||||||||||||||  ||||  | ||||||||||||||||||  ||| |||||||||||||||||    
T  8848 gattttggagagtttagggtcaagaaacggagccaaggaggctcccatcgtagaaaatcgcagaaaaatct 8778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 10692 - 10526
Alignment:
Q  96 aaccatagaattgaatggttaaaagagtggttaatcaggtaggttagtgatgggttaacgttttattgatagggtaatcatatggtgatgtttatggatg 195  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||      
T  10692 aaccatagaatttaacggtgaaaagagtggttaatcaggtaggttagtgatggattaacgttctaatgatagggtaatcatatggtgatgattatggaca 10593  T
Q  196 attttggagagtttagggttgagaattgaagccaaggaggctcccatgataggaaatcgcagaaaaa 262  Q
    |||||||||||||||||||  ||||  | |||||||||| |||||||| ||| ||||||||||||||    
T  10592 attttggagagtttagggtcaagaaacggagccaaggagactcccatggtagaaaatcgcagaaaaa 10526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 1102 - 1047
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccatagaa 105  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  1102 ttgggattaggttttgatttttgatttttgaattgaaaagtgtagaaaccatagaa 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 7100 - 7151
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  7100 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 23808 - 23859
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23808 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 23859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 18556 - 18505
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  18556 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 18505  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2097 - 2140
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  2097 attgtaattctgattttggtttaacatgtttctggtagaaattg 2140  T

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Target: scaffold0117 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 42634 - 42583
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42634 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 42583  T

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Target: scaffold0058 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 39902 - 39953
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  39902 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 39953  T

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Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 169402 - 169351
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  169402 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 169351  T

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Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 176755 - 176704
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  176755 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccat 176704  T

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Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 448848 - 448897
Alignment:
Q  6 aattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    ||||||||||||||||||||| |||  |||||||||||| ||| ||||||    
T  448848 aattctgattttgatttaacaggttattggtagaaattgggaattttggg 448897  T

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Target: scaffold0178 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 26433 - 26391
Alignment:
Q  2 ttgtaattctgattttgatttaacatgtttctggtagaaattg 44  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  26433 ttgtaattctgattttggtttaacatgtttctggtagaaattg 26391  T

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Target: scaffold0334 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 2087 - 2039
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaac 98  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  2087 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 2039  T

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Target: scaffold2016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29 - 68
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaa 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29 attgtaattctgattttggtttaacatgtttctggtagaa 68  T

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Target: scaffold0422 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 3926 - 3875
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  3926 ttgggattaggttttggttattgatttttgaattgaaaagtgtagaaaccat 3875  T

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Target: scaffold0326 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 4569 - 4608
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattg 44  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  4569 taattctgattttgatttaacatgtttatggtagaaattg 4608  T

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Target: scaffold0326; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 19751 - 19790
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattg 44  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  19751 taattctgattttgatttaacatgtttatggtagaaattg 19790  T

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Target: scaffold0293 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 19389 - 19440
Alignment:
Q  51 ttgggattaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  19389 ttgggattaagttttgattattgatttttgaattgaaaagtgtagaaaccat 19440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13428 - 13385
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||||||||||| |||| ||||||||||||    
T  13428 attgtaattctgattttgatttaacaggtttatggtagaaattg 13385  T

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Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 10057 - 10006
Alignment:
Q  51 ttgggattaggttttgattattggtttttga-atgaaaagtgtagaaaccat 101  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  10057 ttgggattaggttttgattattgatttttgagttgaaaagtgtagaaaccat 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 32100 - 32054
Alignment:
Q  56 attaggttttgattattggtttttgaa-tgaaaagtgtagaaaccat 101  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||    
T  32100 attaggttttgattattgatttttgaattgaaaagtgtagaaaccat 32054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 3238 - 3166
Alignment:
Q  6 aattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgattattggttttt 79  Q
    ||||||||||||||||||||| |||  |||||||||||| ||| |||||| ||| | || ||||||||||||||    
T  3238 aattctgattttgatttaacaggttattggtagaaattgggaattttgggtttatg-ttggattattggttttt 3166  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 206911 - 206960
Alignment:
Q  6 aattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    |||||||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  206911 aattctgattttgatttaacatgtttatggtaggaattgggaattttggg 206960  T

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Target: scaffold0249 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5955 - 6034
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctgg-tagaaattgagaaatttgggattaggttttgattattggtttttg 80  Q
    ||||||||| |||||||| |||||||||||| ||| ||||||||| | |||||||| ||||||| ||||| || |||||||    
T  5955 attgtaattttgattttggtttaacatgtttttggttagaaattg-ggaatttgggtttaggttatgattctttgtttttg 6034  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 21839 - 21776
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttgggattaggttttgatt 69  Q
    |||||||||||||  ||||||||  |||||||||||||||||  ||||||| |||||||||||||    
T  21839 taattctgatttttgtttaacatagttctggtagaaattgag-gatttgggtttaggttttgatt 21776  T

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Target: scaffold0601 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 4376 - 4431
Alignment:
Q  162 tgatagggtaatcatatggtgatgtttatggatgattttggagagtttagggttga 217  Q
    ||||||| |||||||| ||||||| ||| ||| |||||||| ||||||||||||||    
T  4376 tgataggttaatcatacggtgatgattagggacgattttggtgagtttagggttga 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 21952 - 21991
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  21952 taattctgattttgatttaacaggtttatggtagaaattg 21991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 26149 - 26188
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattg 44  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  26149 taattctgattttgatttaacaggtttatggtagaaattg 26188  T

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Target: scaffold1290 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 447 - 497
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  447 taattctgattttggtttaacaggtttatggtagaaattgggaattttggg 497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 2374 - 2324
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaattgagaaatttggg 55  Q
    |||||||||||||| ||||||| |||| |||||||||||||| | ||||||    
T  2374 taattctgattttggtttaacaggtttatggtagaaattgaggattttggg 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 23992 - 23954
Alignment:
Q  6 aattctgattttgatttaacatgtttctggtagaaattg 44  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  23992 aattctgattttggtttaacatgtttctggtaggaattg 23954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 13807 - 13769
Alignment:
Q  5 taattctgattttgatttaacatgtttctggtagaaatt 43  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  13807 taattctgattttgatttaacaggtttatggtagaaatt 13769  T

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Target: scaffold1783 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 1302 - 1258
Alignment:
Q  57 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  1302 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 1258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27299 - 27255
Alignment:
Q  1 attgtaattctgattttgatttaacatgtttctgg-tagaaattg 44  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||    
T  27299 attgtaattctgattttggtttaacatgtttttggttagaaattg 27255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 11505 - 11549
Alignment:
Q  57 ttaggttttgattattggtttttgaatgaaaagtgtagaaaccat 101  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||    
T  11505 ttaggttttgattatagatttttgaattgaaagtgtagaaaccat 11549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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