View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1714_low_7 (Length: 455)

Name: NF1714_low_7
Description: NF1714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1714_low_7
NF1714_low_7
[»] chr8 (32 HSPs)
chr8 (76-362)||(27521057-27521341)
chr8 (104-300)||(287321-287517)
chr8 (88-295)||(40267229-40267437)
chr8 (88-297)||(12167088-12167298)
chr8 (88-297)||(12411516-12411726)
chr8 (171-295)||(10895868-10895992)
chr8 (77-245)||(16291970-16292138)
chr8 (106-294)||(17894953-17895138)
chr8 (127-325)||(18666770-18666969)
chr8 (177-295)||(15637303-15637422)
chr8 (177-324)||(15614134-15614281)
chr8 (127-325)||(23689104-23689302)
chr8 (130-325)||(8362284-8362480)
chr8 (175-294)||(23136464-23136584)
chr8 (177-324)||(15605781-15605928)
chr8 (177-323)||(15624344-15624491)
chr8 (177-295)||(15648132-15648251)
chr8 (127-313)||(45250949-45251135)
chr8 (213-284)||(15605115-15605185)
chr8 (213-284)||(15613467-15613538)
chr8 (177-248)||(15613470-15613541)
chr8 (185-295)||(15624169-15624280)
chr8 (189-295)||(15637499-15637606)
chr8 (185-295)||(15647957-15648068)
chr8 (177-295)||(16250410-16250528)
chr8 (177-252)||(23161056-23161131)
chr8 (212-284)||(15624340-15624413)
chr8 (212-284)||(15624523-15624596)
chr8 (212-284)||(15637299-15637372)
chr8 (212-284)||(15648128-15648201)
chr8 (213-284)||(15923609-15923681)
chr8 (177-248)||(15923612-15923684)
[»] chr5 (6 HSPs)
chr5 (76-248)||(19205800-19205971)
chr5 (178-297)||(29857693-29857812)
chr5 (127-325)||(27588592-27588791)
chr5 (171-294)||(9663010-9663135)
chr5 (77-137)||(29857849-29857910)
chr5 (177-223)||(501173-501219)
[»] chr4 (9 HSPs)
chr4 (104-325)||(24003-24224)
chr4 (104-234)||(13914663-13914793)
chr4 (77-160)||(52538248-52538332)
chr4 (218-295)||(52537785-52537862)
chr4 (217-325)||(13914737-13914845)
chr4 (171-239)||(14288140-14288208)
chr4 (127-250)||(35648015-35648138)
chr4 (181-295)||(18066730-18066844)
chr4 (100-149)||(12573975-12574024)
[»] chr2 (8 HSPs)
chr2 (104-268)||(45049525-45049689)
chr2 (178-297)||(5243259-5243378)
chr2 (127-313)||(21119837-21120024)
chr2 (171-252)||(16311597-16311678)
chr2 (177-325)||(24972195-24972344)
chr2 (77-143)||(5243159-5243226)
chr2 (214-273)||(45049559-45049618)
chr2 (389-437)||(31650922-31650970)
[»] scaffold0022 (1 HSPs)
scaffold0022 (104-325)||(101071-101293)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-290)||(67168-67354)
[»] chr3 (12 HSPs)
chr3 (78-295)||(44907703-44907923)
chr3 (88-295)||(30160478-30160686)
chr3 (88-294)||(20795258-20795465)
chr3 (106-294)||(6445097-6445282)
chr3 (171-295)||(6440851-6440975)
chr3 (171-294)||(37197829-37197952)
chr3 (172-252)||(20919310-20919390)
chr3 (172-252)||(20928272-20928352)
chr3 (127-322)||(50246546-50246742)
chr3 (171-238)||(37187498-37187565)
chr3 (385-436)||(39351559-39351610)
chr3 (171-246)||(9270742-9270817)
[»] chr1 (10 HSPs)
chr1 (77-295)||(3832169-3832393)
chr1 (177-295)||(3417311-3417429)
chr1 (104-234)||(8313947-8314077)
chr1 (177-293)||(11440825-11440943)
chr1 (88-294)||(19095360-19095567)
chr1 (214-325)||(8314018-8314129)
chr1 (127-325)||(22544110-22544308)
chr1 (127-295)||(46514372-46514540)
chr1 (242-368)||(16428118-16428246)
chr1 (127-325)||(15535181-15535379)
[»] scaffold0490 (1 HSPs)
scaffold0490 (88-294)||(9160-9367)
[»] scaffold0289 (1 HSPs)
scaffold0289 (171-325)||(22111-22265)
[»] chr6 (10 HSPs)
chr6 (88-295)||(21992518-21992727)
chr6 (127-252)||(1607923-1608050)
chr6 (114-278)||(4749465-4749628)
chr6 (77-144)||(23401271-23401339)
chr6 (127-252)||(11550290-11550417)
chr6 (175-294)||(4856913-4857034)
chr6 (181-295)||(27434713-27434827)
chr6 (177-227)||(30890055-30890105)
chr6 (104-161)||(32681527-32681584)
chr6 (188-284)||(4749374-4749469)
[»] chr7 (2 HSPs)
chr7 (127-325)||(7946432-7946631)
chr7 (177-313)||(29493967-29494104)
[»] scaffold0059 (2 HSPs)
scaffold0059 (172-252)||(67180-67260)
scaffold0059 (172-252)||(75285-75365)
[»] scaffold0003 (1 HSPs)
scaffold0003 (181-295)||(52536-52650)
[»] scaffold0216 (1 HSPs)
scaffold0216 (177-245)||(18094-18162)
[»] scaffold0179 (1 HSPs)
scaffold0179 (105-157)||(32057-32109)
[»] scaffold0191 (1 HSPs)
scaffold0191 (171-293)||(17020-17139)
[»] scaffold0036 (1 HSPs)
scaffold0036 (384-437)||(35464-35517)


Alignment Details
Target: chr8 (Bit Score: 136; Significance: 9e-71; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 76 - 362
Target Start/End: Original strand, 27521057 - 27521341
Alignment:
Q  76 ggaaaagagaatgggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatg 175  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||        |||||    
T  27521057 ggaaaagagaatgggttgaaa----tgattttttatgggaggaagatgtagatgaaaataatgaaaaacaaattatctatgtataggaaaaaaaatcatg 27521152  T
Q  176 acatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaa-taaatgattcaagatccatttttattggt 274  Q
    ||||| ||||||||||||||||||||||||| | |  ||||||||||||||| |||||||| ||| |||| |||||||| || |||||||||| ||||||    
T  27521153 acatggtcaattttgattggctcatgaaaaagaaattagtcatgatccattttgattggctgataaaaaaataaatgatgcaggatccattttaattggt 27521252  T
Q  275 tgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtactataactt-ttgatgaaggcttttgtcttatataaagat 362  Q
    ||||||||||||||||||||| | ||| |||| ||| ||| ||||||||||||  ||| | |||| |||||||||| ||||||||||||    
T  27521253 tgatagaaaagcattaaatgacatgaaaaatgtgaatatgacacgtgtactattgcttatagatgtaggcttttgtattatataaagat 27521341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 104 - 300
Target Start/End: Complemental strand, 287517 - 287321
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaa 203  Q
    |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||        | ||| ||||||||||||||||||||| || ||    
T  287517 ttttttatgggaggaagaggtagatgaaaataatgaaaaacaatttgtctatatataggaaaaaaaattatgtcatgatcaattttgattggctaataaa 287418  T
Q  204 aaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaaga 300  Q
    ||||| | |||||||||||||||| |||||||||||| ||||||||||| ||| |||| ||||| ||||||||||  ||||| ||||||||| ||||    
T  287417 aaataaatgagtcatgatccattttgattggctaataaaaaataaatgagtcatgatctattttgattggttgatgaaaaagtattaaatgagaaga 287321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 88 - 295
Target Start/End: Original strand, 40267229 - 40267437
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatatag-gnnnnnnnntcatgacatgatcaat 186  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| ||| | ||||  |        ||||| ||| ||||||    
T  40267229 gggttgaaagcaatgattttttatgggaggaagatgtagatgaaaataatgaaaagcaaattgtctctgtatatagaaaaaaaatcatgtcataatcaat 40267328  T
Q  187 tttgattggctcatgaaaaatagaagagtcat-gatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaag 285  Q
    |||||||| ||||||||||||| | ||||||| ||||||||| |||||||||||| ||| |||||||||||| ||| ||||| ||||||||||| |||||    
T  40267329 tttgattgactcatgaaaaata-atgagtcattgatccattttgattggctaataaaaagtaaatgattcaatatctattttgattggttgataaaaaag 40267427  T
Q  286 cattaaatga 295  Q
    ||||||||||    
T  40267428 cattaaatga 40267437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 297
Target Start/End: Original strand, 12167088 - 12167298
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaa--cgaattatctatatataggnnnnnnnntcatgacatgatcaa 185  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||  | |||| | |||||||||         |||||  ||||||||    
T  12167088 gggttgaaagcaatgattttttatgggaggaagagatagatgaaaataataaaaaaaccaaattgtttatatatag-tgaaaaaatcatgttatgatcaa 12167186  T
Q  186 ttttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaag 285  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||  ||| | ||||||| |||||| |||||||||| || ||     
T  12167187 ttttgattggctcatgaaaaataaatgagtcatgatccattttgattggataatagaaaaggaataagtcaagattcattttcattggttgatggagaaa 12167286  T
Q  286 cattaaatgaaa 297  Q
    ||||||||||||    
T  12167287 cattaaatgaaa 12167298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 297
Target Start/End: Original strand, 12411516 - 12411726
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaa--cgaattatctatatataggnnnnnnnntcatgacatgatcaa 185  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||  | |||| | |||||||||         |||||  ||||||||    
T  12411516 gggttgaaagcaatgattttttatgggaggaagagatagatgaaaataataaaaaaaccaaattgtttatatatag-tgaaaaaatcatgttatgatcaa 12411614  T
Q  186 ttttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaag 285  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||  ||| | ||||||| |||||| |||||||||| || ||     
T  12411615 ttttgattggctcatgaaaaataaatgagtcatgatccattttgattggataatagaaaaggaataagtcaagattcattttcattggttgatggagaaa 12411714  T
Q  286 cattaaatgaaa 297  Q
    ||||||||||||    
T  12411715 cattaaatgaaa 12411726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 10895992 - 10895868
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttat 270  Q
    ||||| ||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||| |||||| ||||||||||| ||| ||||||| || ||    
T  10895992 tcatgtcatgatcaattttgattggctaatgaaaaataaatgagtcatgatccattttgattgactaataaaaaataaatgagtcatgatccatattgat 10895893  T
Q  271 tggttgatagaaaagcattaaatga 295  Q
    ||||||||| |||| ||||||||||    
T  10895892 tggttgataaaaaaacattaaatga 10895868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 245
Target Start/End: Complemental strand, 16292138 - 16291970
Alignment:
Q  77 gaaaagagaatgg-gttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaa-cgaattatctatatataggnnnnnnnntcat 174  Q
    ||||| ||||||| ||||||||   ||||||||||||||||||||| ||||||||||||||| ||||| | |||| | |||||||||         ||||    
T  16292138 gaaaatagaatggagttgaaagtagtgattttttatgggaggaagaggtagatgaaaataataaaaaatcaaattgtttatatatag--tgaaaaatcat 16292041  T
Q  175 gacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaa 245  Q
    |  ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| ||||| ||||    
T  16292040 gttatgatcaattttgattgactcatgaaaaataaatgagtcatgatccattttgattggataataaaaaa 16291970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 294
Target Start/End: Original strand, 17894953 - 17895138
Alignment:
Q  106 ttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaa 205  Q
    ||||||| |||||||| ||||||| | |||||||||||| |||| | |||||||||          |||| |||||||||||||||||||||||| ||||    
T  17894953 ttttatgagaggaagaggtagatggagataatgaaaaacaaattgtttatatatagaaaaaaag--catgtcatgatcaattttgattggctcataaaaa 17895050  T
Q  206 atagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatg 294  Q
    ||| | |||||||||||  ||| |||||||||| | ||||   |||| ||| |||||||| | ||||||||||| |||| |||||||||    
T  17895051 ataaatgagtcatgatctcttttgattggctaagaaaaaaattatgagtcatgatccattctgattggttgata-aaaaacattaaatg 17895138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 18666969 - 18666770
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| ||||  |||||||||||        ||| | ||||||| ||||||||||| | ||||||| || | |||||||| | |||     
T  18666969 atgaaaataatgaaaaacaaattgcctatatatagggaaaaaaatcaaggcatgatccattttgattggttgatgaaaactaaatgagtcatggttcatc 18666870  T
Q  227 tagattggctaatataaaa-taaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    | |||||||||||| |||| | ||||| |||  || || ||| ||||| ||||| ||||||||||||||| | |||||||| ||||||| ||| ||||||    
T  18666869 ttgattggctaataaaaaaatgaatgagtcataattcaatttgattggatgataaaaaagcattaaatgagatgaagaatgtgaagatgccacatgtact 18666770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 15637303 - 15637422
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatcca-tttagattggctaatataaaataaatgattcaagatccatttttattggtt 275  Q
    ||||||| ||| |||||||||||||||||| | | ||||||||||||| |||  ||||| | ||||||||||||||  |||| ||||||| | ||||| |    
T  15637303 catgatccattatgattggctcatgaaaaacaaatgagtcatgatccattttttattggttgatataaaataaatgtgtcaaaatccattgtcattggat 15637402  T
Q  276 gatagaaaagcattaaatga 295  Q
    ||||| ||| ||||||||||    
T  15637403 gataggaaaacattaaatga 15637422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 324
Target Start/End: Original strand, 15614134 - 15614281
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttg 276  Q
    ||||||| ||| |||||||||||| ||||| | | | |||||||||  |||  ||||| | ||||||||||||||  |||| ||||||| | ||||| ||    
T  15614134 catgatctattatgattggctcataaaaaacaaatgggtcatgatctttttttattggttgatataaaataaatgtgtcaaaatccattctgattggatg 15614233  T
Q  277 atagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtac 324  Q
    ||| |||| |||||||||| | ||  |||  |||||||||||||||||    
T  15614234 ataaaaaaacattaaatgagatgagaaatatgaagatgtcacgtgtac 15614281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 23689104 - 23689302
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| | ||||||||||        ||| | ||||||||||||||||||| | ||||||| || | |||||||  | |||     
T  23689104 atgaaaataatgaaaaacaaattgtttatatataggaaaaaaa-tcaaggcatgatcaattttgattggttgatgaaaactaaatgagtcatagttcatc 23689202  T
Q  227 tagattggctaatataaaa-taaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    | ||||| |||||| |||| | ||||| |||  || || ||| ||||| |||||  |||||||||||||| | |||||||| ||||||||||| ||||||    
T  23689203 ttgattgactaataaaaaaatgaatgagtcataattcaatttgattggatgataagaaagcattaaatgagatgaagaatgtgaagatgtcacatgtact 23689302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 325
Target Start/End: Complemental strand, 8362480 - 8362284
Alignment:
Q  130 aaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttag 229  Q
    ||||||||||||||| |||| |||||||||| |        ||| | ||||||||||||||||||| | ||||||| || | |||||||| | ||| | |    
T  8362480 aaaataatgaaaaacaaattgtctatatataaggaaaaaaatcaaggcatgatcaattttgattggttgatgaaaactaaatgagtcatggttcatcttg 8362381  T
Q  230 attggctaat-ataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    |||||||||| | ||||| || || |||  || || ||| ||||| |||||  ||| |||||||||| | |||||||| ||||||| ||| ||||||    
T  8362380 attggctaataaaaaaatgaaagagtcataattcaatttgattggatgataagaaaacattaaatgagatgaagaatgtgaagatgccacatgtact 8362284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 23136584 - 23136464
Alignment:
Q  175 gacatgatcaattttgattggctcatgaaaaatagaa-gagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattgg 273  Q
    ||||||||||||||||| ||||| ||||||| || || | |||||||  ||||| |||||||||||| ||||||||||| |||  || || ||| |||||    
T  23136584 gacatgatcaattttgactggctgatgaaaactataaagtgtcatgaatcattttgattggctaataaaaaataaatgagtcataattcaatttgattgg 23136485  T
Q  274 ttgatagaaaagcattaaatg 294  Q
     |||||  ||| |||||||||    
T  23136484 atgataagaaaacattaaatg 23136464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 324
Target Start/End: Original strand, 15605781 - 15605928
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttg 276  Q
    ||||||| ||| | |||||||||| ||||| | | | |||||||||  |||  ||||| | ||||||||||||||  |||| ||||||| | ||||| ||    
T  15605781 catgatctattataattggctcataaaaaacaaatgggtcatgatctttttttattggttgatataaaataaatgtgtcaaaatccattctgattggatg 15605880  T
Q  277 atagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtac 324  Q
    ||| |||| |||||||||| | ||  |||  |||||||||||||||||    
T  15605881 ataaaaaaacattaaatgagatgagaaatatgaagatgtcacgtgtac 15605928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 323
Target Start/End: Original strand, 15624344 - 15624491
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggtt 275  Q
    ||||||| ||||||||||||| |||||||| | | ||||||||||||  |||  ||||| | ||||||||||||||  |||| |||  |||| ||||| |    
T  15624344 catgatccattttgattggctgatgaaaaacaaatgagtcatgatcctttttctattggttgatataaaataaatgtgtcaaaatcttttttgattggat 15624443  T
Q  276 gatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgta 323  Q
    ||||  ||| |||||||||| | ||  |||  ||||||||||||||||    
T  15624444 gataagaaaacattaaatgagatgagaaatatgaagatgtcacgtgta 15624491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 15648132 - 15648251
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggtt 275  Q
    ||||||| |||||||||||||||||||||| | | ||||||||||||  |||  ||||| | ||||||||||||||  |||| |||  |||| ||||| |    
T  15648132 catgatccattttgattggctcatgaaaaacaaatgagtcatgatcctttttctattggttgatataaaataaatgtgtcaaaatcttttttgattggat 15648231  T
Q  276 gatagaaaagcattaaatga 295  Q
    ||||  ||| ||||||||||    
T  15648232 gataagaaaacattaaatga 15648251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 45250949 - 45251135
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| ||||||||||||        ||| | ||||||||||||||||||| | ||||||| || | |||||||| | |||     
T  45250949 atgaaaataatgaaaaacaaattgtctatatataggaaaaaaa-tcaaggcatgatcaattttgattggttgatgaaaactaaatgagtcatggttcatc 45251047  T
Q  227 tagattggctaat-ataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagat 313  Q
    | ||| ||||||| | ||||| ||||| |||  || || ||| ||||| |||||  |||||||||||||| | ||||| || ||||||    
T  45251048 ttgatcggctaataaaaaaatgaatgagtcataattcaatttgattggatgataagaaagcattaaatgagatgaagattgtgaagat 45251135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 15605115 - 15605185
Alignment:
Q  213 agtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaa 284  Q
    ||||||||||||||| |||||||| ||| |||| |||||| ||| ||||  |||||||||||||||| ||||    
T  15605115 agtcatgatccattttgattggctcata-aaaaaaaatgagtcatgatctttttttattggttgatataaaa 15605185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 15613467 - 15613538
Alignment:
Q  213 agtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaa 284  Q
    ||||||||||||||| |||||||| ||  |||| |||||| ||| ||||  |||||||||||||||| ||||    
T  15613467 agtcatgatccattttgattggctcatgaaaaaaaaatgagtcatgatctttttttattggttgatataaaa 15613538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 15613470 - 15613541
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataa 248  Q
    ||||||| |||||||||||||||||||||| | | |||||||||||  |||  ||||| | |||||||||||    
T  15613470 catgatccattttgattggctcatgaaaaaaaaatgagtcatgatctttttttattggttgatataaaataa 15613541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 295
Target Start/End: Original strand, 15624169 - 15624280
Alignment:
Q  185 attttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaa 283  Q
    ||||| |||||||||| ||||| | | |||||||||||| ||||  ||||| | |||||||||||| |  |||| ||||||||| ||||| |||||  ||    
T  15624169 attttaattggctcattaaaaacaaatgagtcatgatcctatttttattggttgatataaaataaacgtgtcaaaatccattttgattggatgataagaa 15624268  T
Q  284 agcattaaatga 295  Q
    | ||||||||||    
T  15624269 aacattaaatga 15624280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 15637499 - 15637606
Alignment:
Q  189 tgattggctcatgaaaaatagaagagtcatgatcca-tttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagca 287  Q
    ||||||| |||||||||| | | ||||||||||||  |||  ||||| | ||||||||||||||  |||| ||||||| | ||||| |||||| ||| ||    
T  15637499 tgattggatcatgaaaaacaaatgagtcatgatcctctttttattggttgatataaaataaatgtgtcaaaatccattctgattggatgataggaaaaca 15637598  T
Q  288 ttaaatga 295  Q
    ||||||||    
T  15637599 ttaaatga 15637606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 295
Target Start/End: Original strand, 15647957 - 15648068
Alignment:
Q  185 attttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaa 283  Q
    |||||||||||||||| ||||| | | |||||||||||| ||||  ||||| | |||||||||||| |   ||| ||||||||| ||||| |||||  ||    
T  15647957 attttgattggctcattaaaaacaaatgagtcatgatcctatttttattggttgatataaaataaacgtgccaaaatccattttgattggatgataagaa 15648056  T
Q  284 agcattaaatga 295  Q
    | ||||||||||    
T  15648057 aacattaaatga 15648068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 16250528 - 16250410
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggtt 275  Q
    ||||||| |||||||||||||||||||||||| | |||||||| |||  ||| |||||| | |||||||| |||||  |||  ||| ||||| ||||| |    
T  16250528 catgatccattttgattggctcatgaaaaata-atgagtcatgctccttttttgattggttgatataaaacaaatgtgtcataatctattttgattggat 16250430  T
Q  276 gatagaaaagcattaaatga 295  Q
    ||||  ||| ||||||||||    
T  16250429 gataagaaaacattaaatga 16250410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 23161056 - 23161131
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatga 252  Q
    ||||||||||||||||||||  ||||||| || | | |||||||| ||||| ||||| |||||| |||| ||||||    
T  23161056 catgatcaattttgattggcctatgaaaactaaatgtgtcatgattcattttgattgactaataaaaaagaaatga 23161131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 15624340 - 15624413
Alignment:
Q  212 gagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttt-tattggttgatagaaaa 284  Q
    |||||||||||||||| |||||||| ||  |||| |||||| ||| ||||| |||| |||||||||||| ||||    
T  15624340 gagtcatgatccattttgattggctgatgaaaaacaaatgagtcatgatcctttttctattggttgatataaaa 15624413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 15624523 - 15624596
Alignment:
Q  212 gagtcatgatccatttagattggctaatataaaataaatgattcaagatcc-atttttattggttgatagaaaa 284  Q
    |||||||||||||||  |||||||| ||| |||| |||||| ||| |||||  |||||||||||||||| ||||    
T  15624523 gagtcatgatccattatgattggctcataaaaaacaaatgagtcatgatcctttttttattggttgatataaaa 15624596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 15637299 - 15637372
Alignment:
Q  212 gagtcatgatccatttagattggctaatataaaataaatgattcaagatcca-tttttattggttgatagaaaa 284  Q
    |||||||||||||||  |||||||| ||  |||| |||||| ||| |||||| |||||||||||||||| ||||    
T  15637299 gagtcatgatccattatgattggctcatgaaaaacaaatgagtcatgatccattttttattggttgatataaaa 15637372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 15648128 - 15648201
Alignment:
Q  212 gagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttt-tattggttgatagaaaa 284  Q
    |||||||||||||||| |||||||| ||  |||| |||||| ||| ||||| |||| |||||||||||| ||||    
T  15648128 gagtcatgatccattttgattggctcatgaaaaacaaatgagtcatgatcctttttctattggttgatataaaa 15648201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 15923609 - 15923681
Alignment:
Q  213 agtcatgatccatttagattggctaat-ataaaataaatgattcaagatccatttttattggttgatagaaaa 284  Q
    ||||||||||||||| |||||||| || | |||| |||||| ||| ||||  |||||||||||||||| ||||    
T  15923609 agtcatgatccattttgattggctcatgaaaaaaaaaatgagtcatgatctttttttattggttgatataaaa 15923681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 15923612 - 15923684
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaa-gagtcatgatccatttagattggctaatataaaataa 248  Q
    ||||||| |||||||||||||||||||||| | || |||||||||||  |||  ||||| | |||||||||||    
T  15923612 catgatccattttgattggctcatgaaaaaaaaaatgagtcatgatctttttttattggttgatataaaataa 15923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 76 - 248
Target Start/End: Original strand, 19205800 - 19205971
Alignment:
Q  76 ggaaaagagaatgggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatg 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||    
T  19205800 ggaaaagagaatgggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacaaattatctatatatagg-aaaaaaatcatg 19205898  T
Q  176 acatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataa 248  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19205899 atatgatcaattttgattggctcatgaaaaatagatgagtcatgatccatttagattggctaatataaaataa 19205971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 29857812 - 29857693
Alignment:
Q  178 atgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttga 277  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| ||||| ||||  |||   ||||||| |||||| |||||||||    
T  29857812 atgatcaattttgattgactcatgaaaaataaatgagtcatgatccattttgattggataatagaaaaggaatacgtcaagattcattttcattggttga 29857713  T
Q  278 tagaaaagcattaaatgaaa 297  Q
    | || || ||||||||||||    
T  29857712 tggagaaacattaaatgaaa 29857693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 325
Target Start/End: Complemental strand, 27588791 - 27588592
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| ||||||||| ||        ||| | ||||||||||||||||||| | ||||||| || | |||||||| | |||     
T  27588791 atgaaaataatgaaaaacaaattgtctatatattggaaaaaaaatcaaggcatgatcaattttgattggttgatgaaaactaaatgagtcatggttcatc 27588692  T
Q  227 tagattggctaat-ataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    | ||||||||||| | ||||||||||| |||  || || ||| ||||| |||||  |||  ||||||||| | |||||||| ||||||| ||| ||||||    
T  27588691 ttgattggctaataaaaaaataaatgagtcataattcaatttgattggatgataagaaaatattaaatgagatgaagaatgtgaagatgccacatgtact 27588592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 9663010 - 9663135
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaa--gagtcatgatccatttagattggctaatataaaataaatgattcaagatccattttt 268  Q
    ||||||||||| ||||||||||||||| ||||||| |||||  | || ||||  ||||| |||||||||||| ||||||||||| |||  || || |||     
T  9663010 tcatgacatgaacaattttgattggctgatgaaaactagaaatgtgttatgaatcattttgattggctaataaaaaataaatgagtcataattcaatttg 9663109  T
Q  269 attggttgatagaaaagcattaaatg 294  Q
    ||||| |||||  ||| |||||||||    
T  9663110 attggatgataagaaaacattaaatg 9663135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 29857910 - 29857849
Alignment:
Q  77 gaaaagagaatgg-gttgaaagcgatgattttttatgggaggaagatgtagatgaaaataat 137  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||||| |||||||||||||||    
T  29857910 gaaaatagaatggcgttgaaagcagtgattttttatgggaggaagaggtagatgaaaataat 29857849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 501219 - 501173
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatcc 223  Q
    ||||||| |||||||||||||||||||||| | | ||||||||||||    
T  501219 catgatctattttgattggctcatgaaaaacaaatgagtcatgatcc 501173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 104 - 325
Target Start/End: Original strand, 24003 - 24224
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaa 203  Q
    |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||        ||||| ||||||||||||||||||||| |||||    
T  24003 ttttttatgggaggaagaggtagatgaaaataatgaaaaacaatttgtctatatataggaaaaaaaatcatgtcatgatcaattttgattggctaatgaa 24102  T
Q  204 aaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaaga 303  Q
    ||||| | ||||||| |||||||| |||||||||||| ||||||||||| ||| |||| ||||| ||||||||||  |||| |||||||||| ||||  |    
T  24103 aaataaatgagtcattatccattttgattggctaataaaaaataaatgagtcatgatctattttgattggttgatgaaaaatcattaaatgagaagagaa 24202  T
Q  304 atgcgaagatgtcacgtgtact 325  Q
    ||  ||||||| || |||||||    
T  24203 atttgaagatgccatgtgtact 24224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 104 - 234
Target Start/End: Original strand, 13914663 - 13914793
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaa 203  Q
    |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||        |||||  |||||||||||||||||||| || ||    
T  13914663 ttttttatgggaggaagaggtagatgaaaataatgaaaaacaatttgtctatatataggaaaaaaaatcatgtaatgatcaattttgattggctaataaa 13914762  T
Q  204 aaatagaagagtcatgatccatttagattgg 234  Q
    ||||| | ||||||||||| |||| ||||||    
T  13914763 aaataaatgagtcatgatctattttgattgg 13914793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 52538332 - 52538248
Alignment:
Q  77 gaaaagagaat-gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatata 160  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||    
T  52538332 gaaaagagaatagggttgaaagctatgaatttttatgggaggaagatgtagatgaaaataatgaaaagcaaattgtctctatata 52538248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 52537862 - 52537785
Alignment:
Q  218 tgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatga 295  Q
    |||||||||| |||| ||||||| ||| ||||||||| || ||| ||||| |||||||||||||||||||||||||||    
T  52537862 tgatccattttgatttgctaataaaaagtaaatgatttaatatctattttgattggttgatagaaaagcattaaatga 52537785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 325
Target Start/End: Original strand, 13914737 - 13914845
Alignment:
Q  217 atgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtc 316  Q
    |||||| |||| |||||||||||| ||||||||||| ||| |||| ||||| ||||||||||  ||||||||||||||| ||||  |||  ||||||| |    
T  13914737 atgatcaattttgattggctaataaaaaataaatgagtcatgatctattttgattggttgatgaaaaagcattaaatgagaagataaatttgaagatgcc 13914836  T
Q  317 acgtgtact 325  Q
    | |||||||    
T  13914837 atgtgtact 13914845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 14288140 - 14288208
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaat 239  Q
    ||||| ||||||||||||||||||||| |||||||||| | |||||||||| ||||| |||||||||||    
T  14288140 tcatgtcatgatcaattttgattggctaatgaaaaataaatgagtcatgattcattttgattggctaat 14288208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 250
Target Start/End: Complemental strand, 35648138 - 35648015
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| || |||||||||        ||||||||||| |||||||||||||||  |||||| || | | || ||||  ||||    
T  35648138 atgaaaataatgaaaaacaaattgtcaatatataggaaaaaaaatcatgacatgaacaattttgattggctagtgaaaactaaatgtgttatgaatcatt 35648039  T
Q  227 tagattggctaatataaaataaat 250  Q
    | |||||||||||| |||||||||    
T  35648038 ttgattggctaataaaaaataaat 35648015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 18066730 - 18066844
Alignment:
Q  181 atcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatag 280  Q
    ||||||||||||||| |  |||||| || | |||||||| ||||| | |||||||||||| ||||||||||| |||  || || ||| ||||| |||||     
T  18066730 atcaattttgattggttggtgaaaactaaatgagtcatggtccatcttgattggctaataaaaaataaatgagtcataattcaatttaattggatgataa 18066829  T
Q  281 aaaagcattaaatga 295  Q
     ||| ||||||||||    
T  18066830 gaaaacattaaatga 18066844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 12574024 - 12573975
Alignment:
Q  100 atgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaatt 149  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||| ||||    
T  12574024 atgatcttttatgggaggaagaggtagatggaaataatgaaaaacaaatt 12573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 45049689 - 45049525
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaa 203  Q
    |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||        ||||| ||||||||||||||||||||| |||||    
T  45049689 ttttttatgggaggaagaggtagatgaaaataatgaaaaacaatttgtctatatataggaaaaaaaatcatgtcatgatcaattttgattggctaatgaa 45049590  T
Q  204 aaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccattttt 268  Q
    ||||| | |||||||||||||||| |||||||||||| ||| ||||||| ||| |||| ||||||    
T  45049589 aaataaatgagtcatgatccattttgattggctaataaaaattaaatgagtcatgatctattttt 45049525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 5243259 - 5243378
Alignment:
Q  178 atgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttga 277  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||  |||   ||||||| |||||| |||||||||    
T  5243259 atgatcaattttgattggctcatgaaaaataaatgagtcatgatccattttgattggataatagaaaaggaatacgtcaagattcattttcattggttga 5243358  T
Q  278 tagaaaagcattaaatgaaa 297  Q
    | || || ||||||||||||    
T  5243359 tggagaaacattaaatgaaa 5243378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 313
Target Start/End: Complemental strand, 21120024 - 21119837
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| ||||||||||||        |||   ||||||||||||| ||||| | || |||| || | |||||||| | |||     
T  21120024 atgaaaataatgaaaaacaaattgtctatatataggaaaaaaaatcaaagcatgatcaattttaattggttgataaaaactaaatgagtcatggttcatc 21119925  T
Q  227 tagattggctaata-taaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagat 313  Q
    | |||||||||||| |||||| ||||| |||  || || ||| ||||| |||||  |||||||||||||| | |||||||||||||||    
T  21119924 ttgattggctaataataaaatgaatgagtcataattcaatttgattggatgataagaaagcattaaatgagatgaagaatgcgaagat 21119837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 16311597 - 16311678
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatga 252  Q
    ||||| |||||| |||||||||||||| || |||| || | |||||||||||||||| ||||  |||||| |||||||||||    
T  16311597 tcatggcatgataaattttgattggctgataaaaattaaatgagtcatgatccattttgattaactaataaaaaataaatga 16311678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 24972195 - 24972344
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaa-taaatgattcaagatccatttttattggtt 275  Q
    ||||||||||||||||||| | ||||||| || | |||||||| | ||| | ||||| |||||| |||| | || || |||  || || ||| ||||| |    
T  24972195 catgatcaattttgattggttgatgaaaactaaatgagtcatggttcatcttgattgactaataaaaaaatgaacgagtcataattcaatttgattggat 24972294  T
Q  276 gatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    ||||  |||||||||||||| | |||||||| ||||||| ||| ||||||    
T  24972295 gataagaaagcattaaatgagatgaagaatgtgaagatgccacatgtact 24972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 5243159 - 5243226
Alignment:
Q  77 gaaaagagaatgg-gttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaa 143  Q
    ||||| ||||||| |||||||||  |||||||||||| |||||||| ||||| ||||||||| |||||    
T  5243159 gaaaatagaatggcgttgaaagcagtgattttttatgagaggaagaggtagacgaaaataataaaaaa 5243226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 45049618 - 45049559
Alignment:
Q  214 gtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattgg 273  Q
    ||||||||| |||| |||||||||||  ||||||||||| ||| |||||||||| |||||    
T  45049618 gtcatgatcaattttgattggctaatgaaaaataaatgagtcatgatccattttgattgg 45049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 31650922 - 31650970
Alignment:
Q  389 aaaatgcttaaatgcacgagaacaatattcgtacaaagcacacgaatga 437  Q
    |||||| ||||||| |||| |||||| |||||||||| |||||||||||    
T  31650922 aaaatgtttaaatgtacgacaacaatgttcgtacaaaacacacgaatga 31650970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 104 - 325
Target Start/End: Complemental strand, 101293 - 101071
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnn-tcatgacatgatcaattttgattggctcatga 202  Q
    ||||||||||||| |||| |||||||||||||||| ||||| | || |||||||||||          |||||  ||| |||||||||||||||| ||||    
T  101293 ttttttatgggagaaagaggtagatgaaaataatgtaaaacaatttgtctatatatagaaaaaaaaaatcatgtaatgctcaattttgattggcttatga 101194  T
Q  203 aaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaag 302  Q
    |||||| | |||||||||||||||| |||||||||||| ||||||||||| ||| |||| ||||| ||||||||||  ||||||||||||||| |||||     
T  101193 aaaataaatgagtcatgatccattttgattggctaataaaaaataaatgagtcatgatctattttgattggttgatgaaaaagcattaaatgagaagaaa 101094  T
Q  303 aatgcgaagatgtcacgtgtact 325  Q
    |||  ||||||| || |||||||    
T  101093 aatttgaagatgccatgtgtact 101071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 104 - 290
Target Start/End: Original strand, 67168 - 67354
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaa 203  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||| | ||||||||||         |||  |||||| |||||||||||||| |||||    
T  67168 ttttttaagggaggaagaggtagatgaaaataatgaaaaacaaattgtgtatatataggaaaaaaaaccatttcatgataaattttgattggctaatgaa 67267  T
Q  204 aaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcatta 290  Q
    ||||| | |||| ||||||||||| |||| ||||||| ||||||||||| ||| |||||||||| ||||||||||| |||| |||||    
T  67268 aaataaatgagttatgatccattttgatttgctaataaaaaataaatgagtcatgatccattttaattggttgataaaaaaacatta 67354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 78 - 295
Target Start/End: Original strand, 44907703 - 44907923
Alignment:
Q  78 aaaagagaat-gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaat--tatctatatatag-gnnnnnnnntca 173  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||  | |||||||||||          |||    
T  44907703 aaaagagaatagggttgaaagcaatgattttttatgggaggaagatgtagatgaaaataatgaaaagcaaattgtctctatatatagaaaaaaaaaatca 44907802  T
Q  174 tgacatgatcaattttgattggctcatgaaaaatagaagagtca-tgatccatttagattggctaatataaaataaatgattcaagatccatttttattg 272  Q
    || ||| |||||||||||||  |||||| |||||| | |||||| |||||||||| |||||||||| | ||| |||||||||||| ||| ||||| ||||    
T  44907803 tgtcataatcaattttgattaactcatg-aaaataaatgagtcattgatccattttgattggctaa-aaaaagtaaatgattcaatatctattttgattg 44907900  T
Q  273 gttgatagaaaagcattaaatga 295  Q
    |||||||||||| ||||||||||    
T  44907901 gttgatagaaaaacattaaatga 44907923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 295
Target Start/End: Complemental strand, 30160686 - 30160478
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaatt 187  Q
    ||||||||| | |||| ||||| |||||||||||  ||||||||||||||||||||  |||| |||||||||||         ||||  ||||||| |||    
T  30160686 gggttgaaatcaatgagtttttgtgggaggaagagatagatgaaaataatgaaaaataaattgtctatatatagaaaaaaaaatcatatcatgatccatt 30160587  T
Q  188 ttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagc 286  Q
    ||||||||||||||||||| | | ||||||||||||  |||  ||||| | ||||||||||||||  |||  ||||||||| ||||| |||||  ||| |    
T  30160586 ttgattggctcatgaaaaacaaatgagtcatgatcctctttttattggttgatataaaataaatgtgtcataatccattttgattggatgataagaaaac 30160487  T
Q  287 attaaatga 295  Q
    |||||||||    
T  30160486 attaaatga 30160478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 88 - 294
Target Start/End: Original strand, 20795258 - 20795465
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaatt 187  Q
    ||||||||| | |||| ||||| |||||||||||  ||||||||||||||||||||| |||| |||||||||||         ||||  ||||||  |||    
T  20795258 gggttgaaatcaatgagtttttgtgggaggaagagatagatgaaaataatgaaaaacaaattgtctatatatagaaaaaaaaatcatatcatgattcatt 20795357  T
Q  188 ttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagc 286  Q
    ||||||||||||||||||| | | ||||||||||||  |||  ||||| | ||||||||||||||  |||  ||||||||| ||||| |||||  ||| |    
T  20795358 ttgattggctcatgaaaaacaaatgagtcatgatcctctttttattggttgatataaaataaatgtgtcataatccattttgattggatgatatgaaaac 20795457  T
Q  287 attaaatg 294  Q
    ||||||||    
T  20795458 attaaatg 20795465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 294
Target Start/End: Original strand, 6445097 - 6445282
Alignment:
Q  106 ttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaa 205  Q
    ||||||| |||||||| ||||||| | |||||||||||| |||| | |||||||||          |||| |||||||||||||||||||||||| ||||    
T  6445097 ttttatgagaggaagaggtagatggagataatgaaaaacaaattgtttatatatagaaaaaaag--catgtcatgatcaattttgattggctcataaaaa 6445194  T
Q  206 atagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatg 294  Q
    ||| | |||||||||||  ||| |||||||||| | ||||   |||| ||| |||||||| | ||||||||||| |||| |||||||||    
T  6445195 ataaatgagtcatgatctcttttgattggctaagaaaaaaattatgagtcatgatccattctgattggttgata-aaaaacattaaatg 6445282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 6440851 - 6440975
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttat 270  Q
    ||||| ||||||||||||| |||| || |||||||||| | |||||||||| ||||| ||||||| |||| ||||||| ||| ||| | |  ||||| ||    
T  6440851 tcatgtcatgatcaattttaattgactaatgaaaaataaatgagtcatgattcattttgattggcaaataaaaaataattgagtcatggtatattttgat 6440950  T
Q  271 tggttgatagaaaagcattaaatga 295  Q
    ||||||||  |||| ||||||||||    
T  6440951 tggttgatgaaaaaacattaaatga 6440975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 37197952 - 37197829
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttat 270  Q
    ||||||||||||||||||||||||||| ||||||| || | | |||||||  ||||| |||||| ||||| ||||||||||| |||  || || ||| ||    
T  37197952 tcatgacatgatcaattttgattggctgatgaaaactaaatgtgtcatgaatcattttgattggttaataaaaaataaatgagtcataattcaatttgat 37197853  T
Q  271 tggttgatagaaaagcattaaatg 294  Q
    ||| |||||  ||| |||||||||    
T  37197852 tggatgataagaaaacattaaatg 37197829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 20919390 - 20919310
Alignment:
Q  172 catgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatga 252  Q
    ||||||||||||||||||||||||||  |||||| || | | |||||||  ||||| |||||||||||| |||||||||||    
T  20919390 catgacatgatcaattttgattggctggtgaaaactaaatgtgtcatgaatcattttgattggctaataaaaaataaatga 20919310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 20928352 - 20928272
Alignment:
Q  172 catgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatga 252  Q
    ||||||||||||||||||||||||||  |||||| || | | |||||||  ||||| |||||||||||| |||||||||||    
T  20928352 catgacatgatcaattttgattggctggtgaaaactaaatgtgtcatgaatcattttgattggctaataaaaaataaatga 20928272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 322
Target Start/End: Original strand, 50246546 - 50246742
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| ||||||||||||        ||| | |||||||| |||||||||| | ||||||| || | |||||||| | |||     
T  50246546 atgaaaataatgaaaaacaaattgtctatatataggaaaaaaa-tcaaggcatgatcacttttgattggttgatgaaaactaaatgagtcatggttcatc 50246644  T
Q  227 tagattggctaatataaaata--aatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgt 322  Q
    | |||||||||||| |||| |  ||||| |||  || || ||| |||||  ||||  |||||||||||||| | |||||||| ||||||| |||||||    
T  50246645 ttgattggctaataaaaaaaatgaatgagtcataattcaatttgattggacgataagaaagcattaaatgagatgaagaatgtgaagatgccacgtgt 50246742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 37187565 - 37187498
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaa 238  Q
    ||||| |||||||||||||||||||||||| ||||||| | ||||| |||||  ||| ||||||||||    
T  37187565 tcatgtcatgatcaattttgattggctcataaaaaataaatgagtcgtgatctcttttgattggctaa 37187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 39351610 - 39351559
Alignment:
Q  385 aaggaaaatgcttaaatgcacgagaacaatattcgtacaaagcacacgaatg 436  Q
    |||||||||||||||||| |||| |||| | |||||||||||||||||||||    
T  39351610 aaggaaaatgcttaaatgtacgacaacattgttcgtacaaagcacacgaatg 39351559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 9270742 - 9270817
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaat 246  Q
    ||||| ||||||||||||| ||||||| |||||||||| | ||||||||||  ||||  |||||| |||| |||||    
T  9270742 tcatgtcatgatcaattttaattggctaatgaaaaataaatgagtcatgatttattttaattggcaaataaaaaat 9270817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 77 - 295
Target Start/End: Complemental strand, 3832393 - 3832169
Alignment:
Q  77 gaaaagagaat-gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatct----atatataggnnnnnnnnt 171  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||  | |||| |||    |||||||||        |    
T  3832393 gaaaagagaatagggttgaaagcaatgtttttttatgggaggatgatgtagatgaaaataatgaaag-caaattgtctctatatatataggaaaaaaa-t 3832296  T
Q  172 catgacatgatcaattttgatt--ggctcatgaaaaatagaagagtcat-gatccatttagattggctaatataaaataaatgattcaagatccattttt 268  Q
    |||| | | |||||||||||||  | ||||||||||||| | ||||||| |||||| || |||||||||||| ||| |||||||||||| ||| |||||     
T  3832295 catgtcgtaatcaattttgattttgactcatgaaaaataaatgagtcattgatccaatttgattggctaataaaaagtaaatgattcaatatctattttg 3832196  T
Q  269 attggttgatagaaaagcattaaatga 295  Q
    |||||||||||||||| ||||||||||    
T  3832195 attggttgatagaaaaacattaaatga 3832169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 177 - 295
Target Start/End: Complemental strand, 3417429 - 3417311
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttg 276  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||| |||||| |||||  |||| |||| |  |||||| ||||||||    
T  3417429 catgatcaattttgattggctgatgaaaaataaatgagtcatgatccattttgattgactaatagaaaatggatgagtcaataaacattttgattggttg 3417330  T
Q  277 atagaaaagcattaaatga 295  Q
    ||| ||| |||||||||||    
T  3417329 ataaaaatgcattaaatga 3417311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 234
Target Start/End: Original strand, 8313947 - 8314077
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaa 203  Q
    |||||||||||||||| | |||||||||||||||||||||  | || ||||||||||||        ||||| ||||||||||||||||||||| || ||    
T  8313947 ttttttatgggaggaataggtagatgaaaataatgaaaaataatttgtctatatataggaaaaaaaatcatgtcatgatcaattttgattggctaataaa 8314046  T
Q  204 aaatagaagagtcatgatccatttagattgg 234  Q
    ||||| | ||||||||||| |||| ||||||    
T  8314047 aaataaatgagtcatgatctattttgattgg 8314077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 11440943 - 11440825
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaa--gagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggt 274  Q
    ||||||||||||||||| | | |||||||| | ||  |||||||||||||||| ||||| |||||| ||||||||||| | |||||||||||| ||||||    
T  11440943 catgatcaattttgattagttaatgaaaaaaataaatgagtcatgatccattttgattgactaataaaaaataaatgagttaagatccattttgattggt 11440844  T
Q  275 tgatagaaaagcattaaat 293  Q
    | ||| ||| |||||||||    
T  11440843 taataaaaatgcattaaat 11440825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 294
Target Start/End: Complemental strand, 19095567 - 19095360
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaatt 187  Q
    ||||||||| | |||| ||||  |||||||||||  ||||||||||||||||||||| |||| |||||||||||         ||||  | ||||| |||    
T  19095567 gggttgaaatcaatgagttttagtgggaggaagagatagatgaaaataatgaaaaacaaattgtctatatatagaaaaaaaaatcatatcgtgatccatt 19095468  T
Q  188 ttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagc 286  Q
    ||||||||||||||||||| | | ||||||||||||  |||  ||||| | ||||||||||||||  |||  ||||||||||||||  |||||  ||| |    
T  19095467 ttgattggctcatgaaaaacaaatgagtcatgatcctctttttattggttgatataaaataaatgtgtcataatccatttttattgaatgataagaaaac 19095368  T
Q  287 attaaatg 294  Q
    ||||||||    
T  19095367 attaaatg 19095360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 325
Target Start/End: Original strand, 8314018 - 8314129
Alignment:
Q  214 gtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagat 313  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||| |||| ||||| ||||||||||| |||| |||||||||| || |  |||  ||||||    
T  8314018 gtcatgatcaattttgattggctaataaaaaataaatgagtcatgatctattttgattggttgataaaaaaacattaaatgagaaaagaaatttgaagat 8314117  T
Q  314 gtcacgtgtact 325  Q
    |||| |||||||    
T  8314118 gtcatgtgtact 8314129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 22544110 - 22544308
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| | ||||||||||        ||| | ||||||||||||||||||| | ||||||| || | |||||||| | |||     
T  22544110 atgaaaataatgaaaaacaaattgtttatatataggaaaaaaa-tcaaggcatgatcaattttgattggttgatgaaaactaaatgagtcatggttcatc 22544208  T
Q  227 tagattggctaat-ataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    | ||||||||||| | ||||| ||||| |||  || || ||| ||||| |||||  |||||||||||||| | |||||||| ||||||||||| ||||||    
T  22544209 ttgattggctaataaaaaaatgaatgagtcataattcaatttgattggatgataagaaagcattaaatgagatgaagaatgtgaagatgtcacatgtact 22544308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 295
Target Start/End: Complemental strand, 46514540 - 46514372
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||| | | || ||||||||||||        ||||| ||||||||||||| ||||||| |||||||||| | || |||| || ||||    
T  46514540 atgaaaataatgaaaagcaagttgtctatatataggggaaaaaatcatgtcatgatcaattttaattggctaatgaaaaataaatgaatcatcattcatt 46514441  T
Q  227 tagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatga 295  Q
    | ||||||  |||| ||| ||||||| ||  |||  ||||| ||||||||||  |||| ||||||||||    
T  46514440 ttgattggtaaataaaaagtaaatgagtcgtgatatattttgattggttgatgaaaaaacattaaatga 46514372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 368
Target Start/End: Complemental strand, 16428246 - 16428118
Alignment:
Q  242 aaaataaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcac--gtgtactataacttttgatga 339  Q
    |||||||||||||||| ||| ||||| |||| || |||||||| |||||||||||| | |||||   ||||||||||   |||||||| | |||| | ||    
T  16428246 aaaataaatgattcaaaatctattttaattgattcatagaaaaacattaaatgaaatggagaatataaagatgtcacatatgtactatcaattttaagga 16428147  T
Q  340 aggcttttgtcttatataaagataaagat 368  Q
    |||| ||||| |||||||  |||||||||    
T  16428146 aggcatttgtattatatatggataaagat 16428118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 15535181 - 15535379
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| | ||||||||||        ||| | ||||||||||||||||||| | ||||||| || | |||||||  | |||     
T  15535181 atgaaaataatgaaaaacaaattgtttatatataggaaaaaaa-tcaaggcatgatcaattttgattggttgatgaaaactaaatgagtcatagttcatc 15535279  T
Q  227 tagattggctaatataaaa-taaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    | ||||| |||||| |||| | ||||| |||  || || ||| ||||| |||||  ||| |||||||||||| |||||||| ||||||| ||| ||||||    
T  15535280 ttgattgactaataaaaaaatgaatgagtcataattcaatttgattggatgataagaaaacattaaatgaaatgaagaatgtgaagatgccacatgtact 15535379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 294
Target Start/End: Complemental strand, 9367 - 9160
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaatt 187  Q
    ||||||||| | |||| ||||| |||||||||||  ||||||||||||||||||||| |||| |||||||||||         ||||  ||||||| |||    
T  9367 gggttgaaatcaatgagtttttgtgggaggaagagatagatgaaaataatgaaaaacaaattgtctatatatagaaaaaaaaatcatatcatgatccatt 9268  T
Q  188 ttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaagc 286  Q
    ||||||||||||||||||||| | ||||||||||||  |||  ||||| | ||||||||||||||  | |  ||||||||| ||||| |||||  ||| |    
T  9267 ttgattggctcatgaaaaataaatgagtcatgatcctctttttattggttgatataaaataaatgtgttataatccattttgattggatgataagaaaac 9168  T
Q  287 attaaatg 294  Q
    ||||||||    
T  9167 attaaatg 9160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 325
Target Start/End: Original strand, 22111 - 22265
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttat 270  Q
    ||||| ||||||||||||| ||||||| |||||||||| | ||||||||||  |||| ||||| | |||| ||||||||||| ||| |||  ||||| ||    
T  22111 tcatgtcatgatcaattttaattggctaatgaaaaataaatgagtcatgatttattttgattgacaaataaaaaataaatgagtcatgatatattttgat 22210  T
Q  271 tggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    ||||||||  ||||||||||||||| | ||  |||  |||||||||| |||||||    
T  22211 tggttgatgaaaaagcattaaatgagatgagaaattagaagatgtcatgtgtact 22265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 88 - 295
Target Start/End: Original strand, 21992518 - 21992727
Alignment:
Q  88 gggttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatatag-gnnnnnnnntcatgacatgatcaat 186  Q
    ||||||||| | |||| ||||| |||||||||||  ||||||||||||||||||||| |||| |||||||||||          ||||  ||||||| ||    
T  21992518 gggttgaaatcaatgagtttttgtgggaggaagagatagatgaaaataatgaaaaacaaattgtctatatatagaaaaaaaaaatcatatcatgatccat 21992617  T
Q  187 tttgattggctcatgaaaaatagaagagtcatgatcc-atttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaag 285  Q
    ||||||||||||| |||||| | | ||||||||||||  ||| |||||| | ||||||||||||||  |||  ||||||||| ||||| |||||  |||     
T  21992618 tttgattggctcaagaaaaacaaatgagtcatgatcctcttttgattggttgatataaaataaatgtgtcataatccattttgattggatgataagaaaa 21992717  T
Q  286 cattaaatga 295  Q
    ||||||||||    
T  21992718 cattaaatga 21992727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 252
Target Start/End: Original strand, 1607923 - 1608050
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaa--atagaagagtcatgatcca 224  Q
    ||||||| |||||||||| |||| || |||||||||        ||||||||||||||||||||||||||| |||||||  ||| | | |||||||  ||    
T  1607923 atgaaaacaatgaaaaacaaattgtcaatatatagggaaaaaaatcatgacatgatcaattttgattggctgatgaaaactataaatgtgtcatgaatca 1608022  T
Q  225 tttagattggctaatataaaataaatga 252  Q
    ||| |||||||||||| |||||||||||    
T  1608023 ttttgattggctaataaaaaataaatga 1608050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 278
Target Start/End: Complemental strand, 4749628 - 4749465
Alignment:
Q  114 gaggaagatgtagatgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaaga 213  Q
    |||||||| ||||||||| |||||||||||| |||| | ||||||||          ||||| |||||||||||||||||||||||| ||||||| | ||    
T  4749628 gaggaagaggtagatgaagataatgaaaaacaaattgtttatatatatagaaaaaaatcatgtcatgatcaattttgattggctcataaaaaataaatga 4749529  T
Q  214 gtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgat 278  Q
    |||||||||  ||| ||||| |||| | |||||  |||| ||| |||||||| | ||||||||||    
T  4749528 gtcatgatctcttttgattgactaagaaaaaat-tatgagtcatgatccattctgattggttgat 4749465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 23401339 - 23401271
Alignment:
Q  77 gaaaagagaatgg-gttgaaagcgatgattttttatgggaggaagatgtagatgaaaataatgaaaaac 144  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||| ||||||    
T  23401339 gaaaatagaatggcgttgaaagcagtgattttttatgggaggaagaggtagatgaaaataataaaaaac 23401271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 11550417 - 11550290
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaa--atagaagagtcatgatcca 224  Q
    ||||||| |||||||||| |||| || |||||||||        ||| ||||||||||||||||||||||| |||||||  ||| | | |||||||  ||    
T  11550417 atgaaaacaatgaaaaacaaattgtcaatatatagggaaaaaaatcaagacatgatcaattttgattggctgatgaaaactataaatgtgtcatgaatca 11550318  T
Q  225 tttagattggctaatataaaataaatga 252  Q
    ||| |||||| ||||| |||||||||||    
T  11550317 ttttgattggttaataaaaaataaatga 11550290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 294
Target Start/End: Original strand, 4856913 - 4857034
Alignment:
Q  175 gacatgatcaattttgattggctcatgaaaa--atagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattg 272  Q
    ||||||||||||||||||||||| |||||||  ||| | | |||||||  ||||| |||||| ||||| ||||||||||| |||  || || ||| ||||    
T  4856913 gacatgatcaattttgattggctgatgaaaactataaatgtgtcatgaatcattttgattggttaataaaaaataaatgagtcataattcaatttgattg 4857012  T
Q  273 gttgatagaaaagcattaaatg 294  Q
    | |||||  ||| |||||||||    
T  4857013 gatgataagaaaacattaaatg 4857034  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 27434827 - 27434713
Alignment:
Q  181 atcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatag 280  Q
    ||||||||||||||| |  |||||| || | |||||||| ||||| | |||||||||||| ||||||||||| |||  || || ||| ||||| |||||     
T  27434827 atcaattttgattggttggtgaaaactaaatgagtcatggtccatcttgattggctaataaaaaataaatgagtcataattcaatttaattggatgataa 27434728  T
Q  281 aaaagcattaaatga 295  Q
     ||| ||||||||||    
T  27434727 gaaaacattaaatga 27434713  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 30890055 - 30890105
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccattt 227  Q
    ||||||||||||||||||| ||||| |||||| | ||||||||||| ||||    
T  30890055 catgatcaattttgattggatcatgtaaaataaatgagtcatgatcaattt 30890105  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 32681584 - 32681527
Alignment:
Q  104 ttttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatatatag 161  Q
    ||||||||||||||||||   | |||||||||||||||||  |||| |||||||||||    
T  32681584 ttttttatgggaggaagaaacacatgaaaataatgaaaaataaattgtctatatatag 32681527  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 4749469 - 4749374
Alignment:
Q  188 ttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatagaaaa 284  Q
    ||||||| ||||| ||||||| | |||||||||||  ||| |||||||||| | |||||  |||| ||| |||||||| | ||||||||||| ||||    
T  4749469 ttgattgactcataaaaaataaatgagtcatgatctcttttgattggctaagaaaaaat-tatgagtcatgatccattctgattggttgataaaaaa 4749374  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 325
Target Start/End: Original strand, 7946432 - 7946631
Alignment:
Q  127 atgaaaataatgaaaaacgaattatctatatataggnnnnnnnntcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatt 226  Q
    |||||||||||||||||| |||| ||||||||||||        |||  |||||||| ||||||||||| | ||||||| || | |||||||| | |||     
T  7946432 atgaaaataatgaaaaacaaattgtctatatatagggaaaaaaatcaaaacatgatccattttgattggttgatgaaaactaaatgagtcatggttcatc 7946531  T
Q  227 tagattggctaatataaaa-taaatgattcaagatccatttttattggttgatagaaaagcattaaatgaaaagaagaatgcgaagatgtcacgtgtact 325  Q
    | |||||||||||| |||| | ||||| |||  ||  | ||| ||||| |||||  ||| |||||||||| | |||||||  ||||||||||| ||||||    
T  7946532 ttgattggctaataaaaaaatgaatgagtcataatttaatttgattggatgataagaaaacattaaatgagatgaagaatatgaagatgtcacatgtact 7946631  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 313
Target Start/End: Complemental strand, 29494104 - 29493967
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaat-ataaaataaatgattcaagatccatttttattggtt 275  Q
    ||||||||||||||||||| | ||||||| || | |||||||||| ||| | ||||||||||| | ||||| ||||| |||  || || ||| ||||| |    
T  29494104 catgatcaattttgattggttgatgaaaactaaatgagtcatgattcatcttgattggctaataaaaaaatgaatgagtcataattcaatttgattggat 29494005  T
Q  276 gatagaaaagcattaaatgaaaagaagaatgcgaagat 313  Q
    ||||  |||||||||||| | | |||||||| ||||||    
T  29494004 gataagaaagcattaaataagatgaagaatgtgaagat 29493967  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 67180 - 67260
Alignment:
Q  172 catgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatga 252  Q
    ||||||||||||||||||||||||||  |||||| || | | ||||| |  ||||| |||||||||||| |||||||||||    
T  67180 catgacatgatcaattttgattggctggtgaaaactaaatgtgtcataaatcattttgattggctaataaaaaataaatga 67260  T

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Target: scaffold0059; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 75285 - 75365
Alignment:
Q  172 catgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatga 252  Q
    ||||||||||||||||||||||||||  |||||| || | | ||||| |  ||||| |||||||||||| |||||||||||    
T  75285 catgacatgatcaattttgattggctggtgaaaactaaatgtgtcataaatcattttgattggctaataaaaaataaatga 75365  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 52536 - 52650
Alignment:
Q  181 atcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttattggttgatag 280  Q
    ||||||||||||||| |  |||||| || | |||||||| ||||| | |||||||||||| ||||||||||| |||  || || ||| ||||| |||||     
T  52536 atcaattttgattggttggtgaaaactaaatgagtcatggtccatcttgattggctaataaaaaataaatgagtcataattcaatttaattggatgataa 52635  T
Q  281 aaaagcattaaatga 295  Q
     ||| ||||||||||    
T  52636 gaaaacattaaatga 52650  T

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Target: scaffold0216 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 18162 - 18094
Alignment:
Q  177 catgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaa 245  Q
    ||||||||||||||||||| | ||||||| || | |||||||| | ||| | |||||||||||||||||    
T  18162 catgatcaattttgattggttgatgaaaactaaatgagtcatggttcatcttgattggctaatataaaa 18094  T

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Target: scaffold0179 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 32057 - 32109
Alignment:
Q  105 tttttatgggaggaagatgtagatgaaaataatgaaaaacgaattatctatat 157  Q
    |||| ||||||||||||||||||||||| ||||||||||  |||| |||||||    
T  32057 ttttcatgggaggaagatgtagatgaaagtaatgaaaaaaaaattgtctatat 32109  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 17020 - 17139
Alignment:
Q  171 tcatgacatgatcaattttgattggctcatgaaaaatagaagagtcatgatccatttagattggctaatataaaataaatgattcaagatccatttttat 270  Q
    ||||| |||||||||||||||||| || || ||| ||| |  |||||||||| ||||  ||||| ||||| ||||||||||| |||  ||| ||||| ||    
T  17020 tcatgtcatgatcaattttgattg-ctaataaaatataaataagtcatgatctattttaattggttaataaaaaataaatgagtca--atctattttgat 17116  T
Q  271 tggttgatagaaaagcattaaat 293  Q
    ||||||||  |||| ||||||||    
T  17117 tggttgatgaaaaaacattaaat 17139  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 35517 - 35464
Alignment:
Q  384 taaggaaaatgcttaaatgcacgagaacaatattcgtacaaagcacacgaatga 437  Q
    |||||||||||| |||||| || | || ||| ||||||||||||||||||||||    
T  35517 taaggaaaatgcgtaaatgtacaacaaaaatgttcgtacaaagcacacgaatga 35464  T

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