View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17151_low_5 (Length: 245)
Name: NF17151_low_5
Description: NF17151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17151_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 17196462 - 17196703
Alignment:
| Q |
1 |
ccaatcataaagaacaggaacaagagatttccattgagagtacttctcatcaacagaagcttgttgttgctgctgctgatgaagctgttgctgttgcttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17196462 |
ccaatcataaagaacaggaacaagagatttccattgagagtacttctcatcaacagaagcttgttgttgctgctgctgatgaagctgttgctgttgcttt |
17196561 |
T |
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| Q |
101 |
tccttcttcgattctctcggtgtcttcacttgtgatggttcttctctcttgtcttccttgggtttaggtttgcgtcctcttgtctccttcttcttcacgg |
200 |
Q |
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|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17196562 |
tccttcttcgattctctcggtgacttcacttgtgatggttcttctctcttgtcttccttgggtttaggtttgcgtcctcttgtctccttcttcttcacgg |
17196661 |
T |
|
| Q |
201 |
cgccggttgagggtggtgtctccatttctcacgctctgtgct |
242 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||| |
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| T |
17196662 |
cgccggttgagggtggtgtctccatttctcactctctgtgct |
17196703 |
T |
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