View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17152_high_38 (Length: 387)

Name: NF17152_high_38
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17152_high_38
NF17152_high_38
[»] chr1 (36 HSPs)
chr1 (100-385)||(42848379-42848664)
chr1 (4-69)||(5190723-5190788)
chr1 (4-69)||(7180556-7180621)
chr1 (4-69)||(21265719-21265784)
chr1 (8-69)||(48638599-48638660)
chr1 (1-69)||(12048066-12048134)
chr1 (4-69)||(1570134-1570199)
chr1 (4-69)||(6438006-6438071)
chr1 (4-69)||(12502196-12502261)
chr1 (4-69)||(15819543-15819608)
chr1 (6-79)||(28564277-28564350)
chr1 (4-69)||(32594314-32594379)
chr1 (4-69)||(40519485-40519550)
chr1 (4-69)||(46965803-46965868)
chr1 (5-69)||(12650326-12650390)
chr1 (1-69)||(13773228-13773296)
chr1 (4-68)||(32589432-32589496)
chr1 (4-64)||(42848686-42848746)
chr1 (7-81)||(15390286-15390360)
chr1 (9-63)||(35605571-35605625)
chr1 (4-82)||(40375244-40375322)
chr1 (4-66)||(42490355-42490417)
chr1 (4-69)||(1151822-1151887)
chr1 (4-69)||(7166169-7166234)
chr1 (4-69)||(7191095-7191160)
chr1 (4-69)||(8984448-8984513)
chr1 (4-69)||(12374456-12374521)
chr1 (4-69)||(16526119-16526184)
chr1 (4-69)||(19063275-19063340)
chr1 (8-69)||(33033193-33033254)
chr1 (4-69)||(34058277-34058342)
chr1 (4-69)||(39346921-39346986)
chr1 (4-69)||(44732696-44732761)
chr1 (1-69)||(6213481-6213549)
chr1 (1-69)||(27234047-27234115)
chr1 (5-69)||(48897059-48897123)
[»] chr8 (45 HSPs)
chr8 (4-69)||(43085165-43085230)
chr8 (4-69)||(10568148-10568213)
chr8 (4-69)||(11875949-11876014)
chr8 (4-69)||(11890956-11891021)
chr8 (4-69)||(34413125-34413190)
chr8 (1-69)||(17698582-17698650)
chr8 (1-69)||(27077039-27077107)
chr8 (6-69)||(42801591-42801654)
chr8 (4-78)||(43186916-43186990)
chr8 (4-69)||(94453-94518)
chr8 (4-69)||(2787023-2787088)
chr8 (4-69)||(5328509-5328574)
chr8 (4-69)||(17027823-17027888)
chr8 (4-69)||(17558259-17558324)
chr8 (4-69)||(21548439-21548504)
chr8 (4-69)||(28909528-28909593)
chr8 (4-69)||(29716923-29716988)
chr8 (4-69)||(37290985-37291050)
chr8 (4-69)||(37717426-37717491)
chr8 (4-69)||(38219510-38219575)
chr8 (4-69)||(44340287-44340352)
chr8 (8-64)||(8034359-8034415)
chr8 (1-69)||(29170825-29170893)
chr8 (1-69)||(33604120-33604188)
chr8 (4-82)||(10736803-10736881)
chr8 (1-63)||(32719556-32719618)
chr8 (7-69)||(35939553-35939615)
chr8 (7-69)||(39587613-39587675)
chr8 (4-69)||(257602-257667)
chr8 (4-69)||(658253-658318)
chr8 (4-69)||(843989-844054)
chr8 (4-69)||(1337057-1337122)
chr8 (4-69)||(1632382-1632447)
chr8 (4-69)||(5570957-5571022)
chr8 (4-69)||(8265331-8265396)
chr8 (4-69)||(11787214-11787279)
chr8 (4-69)||(17072505-17072570)
chr8 (4-69)||(17575701-17575766)
chr8 (4-69)||(29514689-29514754)
chr8 (8-69)||(29729186-29729247)
chr8 (4-69)||(35818123-35818187)
chr8 (5-69)||(7763881-7763945)
chr8 (1-69)||(11900385-11900453)
chr8 (5-69)||(31450899-31450963)
chr8 (1-69)||(32258067-32258135)
[»] chr6 (32 HSPs)
chr6 (4-69)||(29284329-29284394)
chr6 (4-82)||(8297690-8297768)
chr6 (4-69)||(28222925-28222990)
chr6 (5-69)||(2816954-2817018)
chr6 (4-80)||(19618657-19618733)
chr6 (6-69)||(216271-216334)
chr6 (6-69)||(33646900-33646963)
chr6 (7-69)||(15449505-15449567)
chr6 (5-69)||(978078-978140)
chr6 (8-69)||(7177362-7177423)
chr6 (4-69)||(9888467-9888532)
chr6 (4-69)||(10934662-10934727)
chr6 (4-69)||(13116566-13116631)
chr6 (4-69)||(19953770-19953835)
chr6 (4-69)||(28148675-28148740)
chr6 (4-75)||(7207907-7207978)
chr6 (7-69)||(15963885-15963947)
chr6 (4-69)||(3794115-3794180)
chr6 (8-69)||(6210121-6210182)
chr6 (8-69)||(7328589-7328650)
chr6 (12-69)||(8857154-8857211)
chr6 (4-69)||(9246324-9246389)
chr6 (4-69)||(10517262-10517327)
chr6 (4-69)||(13732874-13732939)
chr6 (4-69)||(17441781-17441846)
chr6 (8-69)||(24618441-24618502)
chr6 (4-69)||(27218947-27219012)
chr6 (4-69)||(30705023-30705088)
chr6 (4-69)||(31802116-31802181)
chr6 (4-69)||(32611496-32611561)
chr6 (8-69)||(34040739-34040800)
chr6 (7-63)||(9372149-9372205)
[»] chr4 (44 HSPs)
chr4 (4-69)||(30057285-30057350)
chr4 (4-79)||(36132292-36132367)
chr4 (4-69)||(3035997-3036062)
chr4 (4-69)||(3847744-3847809)
chr4 (4-69)||(8965157-8965222)
chr4 (1-69)||(40994045-40994113)
chr4 (1-69)||(54029613-54029681)
chr4 (1-69)||(56087896-56087964)
chr4 (4-82)||(43147313-43147391)
chr4 (4-69)||(626924-626989)
chr4 (4-69)||(1457960-1458025)
chr4 (4-65)||(2222602-2222663)
chr4 (4-69)||(10141046-10141111)
chr4 (4-69)||(18360556-18360621)
chr4 (8-69)||(25235739-25235800)
chr4 (4-69)||(27743657-27743722)
chr4 (4-69)||(34353842-34353907)
chr4 (4-69)||(36602308-36602373)
chr4 (4-69)||(42231575-42231640)
chr4 (4-69)||(43596958-43597023)
chr4 (4-69)||(46774972-46775037)
chr4 (4-69)||(48615414-48615479)
chr4 (4-69)||(48950847-48950912)
chr4 (4-69)||(49901545-49901610)
chr4 (4-69)||(53634193-53634258)
chr4 (4-72)||(9761178-9761246)
chr4 (5-69)||(46562707-46562771)
chr4 (7-69)||(39023241-39023303)
chr4 (7-69)||(48744273-48744335)
chr4 (4-69)||(4700880-4700945)
chr4 (4-69)||(5304952-5305017)
chr4 (4-69)||(6371177-6371242)
chr4 (4-69)||(10402504-10402569)
chr4 (4-69)||(12581970-12582035)
chr4 (4-69)||(17709402-17709467)
chr4 (4-69)||(26868411-26868476)
chr4 (8-69)||(40051689-40051750)
chr4 (8-69)||(43271659-43271720)
chr4 (4-69)||(45112054-45112118)
chr4 (4-69)||(53376621-53376686)
chr4 (4-69)||(55251293-55251358)
chr4 (1-69)||(2688156-2688223)
chr4 (7-47)||(37318100-37318140)
chr4 (1-69)||(48949689-48949757)
[»] scaffold0088 (1 HSPs)
scaffold0088 (4-69)||(10768-10833)
[»] scaffold0085 (1 HSPs)
scaffold0085 (4-69)||(27872-27937)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-69)||(23423-23488)
[»] chr7 (40 HSPs)
chr7 (4-69)||(3766874-3766939)
chr7 (4-69)||(9877209-9877274)
chr7 (4-69)||(10244831-10244896)
chr7 (4-69)||(23102500-23102565)
chr7 (4-69)||(32074337-32074402)
chr7 (7-69)||(43119374-43119436)
chr7 (4-69)||(3062837-3062902)
chr7 (4-69)||(26122093-26122158)
chr7 (4-69)||(29617468-29617533)
chr7 (4-69)||(35950191-35950256)
chr7 (4-69)||(44616665-44616730)
chr7 (5-69)||(12615815-12615879)
chr7 (1-69)||(42443749-42443817)
chr7 (5-69)||(45640034-45640098)
chr7 (1-69)||(47999840-47999908)
chr7 (4-63)||(1563687-1563746)
chr7 (6-69)||(42547970-42548033)
chr7 (7-69)||(19752910-19752972)
chr7 (7-69)||(35645665-35645727)
chr7 (6-76)||(47463996-47464066)
chr7 (8-69)||(12640531-12640592)
chr7 (4-69)||(19331442-19331507)
chr7 (4-69)||(24781093-24781158)
chr7 (4-69)||(26801671-26801736)
chr7 (4-69)||(28805363-28805428)
chr7 (4-69)||(31026282-31026347)
chr7 (4-69)||(31077845-31077910)
chr7 (4-69)||(32619413-32619478)
chr7 (4-69)||(32676884-32676949)
chr7 (4-69)||(34267493-34267558)
chr7 (4-69)||(36391846-36391911)
chr7 (4-69)||(40705897-40705962)
chr7 (4-69)||(45669715-45669780)
chr7 (4-69)||(48119533-48119598)
chr7 (4-69)||(48674504-48674569)
chr7 (5-69)||(9906059-9906123)
chr7 (2-54)||(27678967-27679019)
chr7 (9-69)||(28501225-28501285)
chr7 (9-69)||(34051817-34051877)
chr7 (1-69)||(43633032-43633100)
[»] chr3 (43 HSPs)
chr3 (8-69)||(32429814-32429875)
chr3 (4-69)||(41936349-41936414)
chr3 (8-69)||(51155034-51155095)
chr3 (4-69)||(53432679-53432744)
chr3 (4-67)||(39719998-39720061)
chr3 (4-82)||(4139063-4139141)
chr3 (4-69)||(2522989-2523054)
chr3 (4-69)||(15975350-15975415)
chr3 (4-69)||(18194401-18194466)
chr3 (4-69)||(30555169-30555234)
chr3 (4-69)||(33706669-33706734)
chr3 (4-69)||(34102553-34102618)
chr3 (4-69)||(37800553-37800618)
chr3 (4-69)||(40933773-40933838)
chr3 (4-69)||(50496756-50496821)
chr3 (4-69)||(53163657-53163722)
chr3 (5-69)||(7270019-7270083)
chr3 (5-69)||(10482795-10482859)
chr3 (8-67)||(4860228-4860287)
chr3 (8-67)||(4880236-4880295)
chr3 (6-69)||(10349465-10349528)
chr3 (7-69)||(5636741-5636803)
chr3 (7-61)||(11436570-11436624)
chr3 (7-69)||(17608261-17608323)
chr3 (4-66)||(37488405-37488467)
chr3 (4-82)||(42108111-42108189)
chr3 (7-69)||(48251638-48251700)
chr3 (7-69)||(50675684-50675746)
chr3 (4-69)||(2007025-2007090)
chr3 (4-69)||(6919905-6919970)
chr3 (4-69)||(14795174-14795239)
chr3 (4-69)||(31327443-31327508)
chr3 (1-38)||(31587007-31587044)
chr3 (4-69)||(32144647-32144712)
chr3 (4-69)||(33606882-33606947)
chr3 (4-69)||(40548366-40548431)
chr3 (4-69)||(45551751-45551816)
chr3 (4-69)||(52973995-52974060)
chr3 (9-69)||(4640422-4640482)
chr3 (1-69)||(11206050-11206118)
chr3 (8-76)||(34898702-34898770)
chr3 (9-69)||(43997584-43997644)
chr3 (8-72)||(52410180-52410244)
[»] chr2 (28 HSPs)
chr2 (4-69)||(5613017-5613082)
chr2 (4-69)||(36182705-36182770)
chr2 (4-76)||(6331624-6331696)
chr2 (1-69)||(18073803-18073871)
chr2 (7-69)||(38400380-38400442)
chr2 (1-46)||(1232252-1232297)
chr2 (4-69)||(1260247-1260312)
chr2 (4-69)||(1309068-1309133)
chr2 (4-69)||(13773463-13773528)
chr2 (4-65)||(33228879-33228940)
chr2 (4-69)||(41509579-41509644)
chr2 (1-69)||(18278359-18278427)
chr2 (1-69)||(18694845-18694913)
chr2 (6-69)||(1844882-1844945)
chr2 (6-69)||(17499014-17499077)
chr2 (1-75)||(41566822-41566896)
chr2 (4-69)||(1071533-1071598)
chr2 (4-65)||(20296481-20296542)
chr2 (8-69)||(27913412-27913473)
chr2 (4-69)||(28153084-28153149)
chr2 (4-69)||(28194695-28194760)
chr2 (4-65)||(40535395-40535456)
chr2 (13-69)||(5112793-5112849)
chr2 (5-69)||(11050699-11050763)
chr2 (1-69)||(17034795-17034863)
chr2 (1-69)||(17089303-17089371)
chr2 (6-38)||(33222127-33222159)
chr2 (4-64)||(44857181-44857241)
[»] chr5 (28 HSPs)
chr5 (5-69)||(6558865-6558929)
chr5 (7-69)||(21918118-21918180)
chr5 (4-69)||(4745818-4745883)
chr5 (4-69)||(8968812-8968877)
chr5 (4-69)||(11795556-11795621)
chr5 (4-69)||(12463819-12463884)
chr5 (4-69)||(25400309-25400374)
chr5 (1-69)||(36124459-36124527)
chr5 (5-69)||(41156392-41156456)
chr5 (7-69)||(13799366-13799428)
chr5 (7-69)||(18477413-18477475)
chr5 (11-69)||(24133026-24133084)
chr5 (4-82)||(27765320-27765398)
chr5 (7-69)||(29691423-29691485)
chr5 (4-69)||(2301513-2301578)
chr5 (4-69)||(4417627-4417692)
chr5 (4-69)||(9835096-9835161)
chr5 (4-69)||(11774401-11774466)
chr5 (4-69)||(11897311-11897376)
chr5 (4-69)||(14641051-14641116)
chr5 (4-69)||(17064801-17064865)
chr5 (4-69)||(21749320-21749385)
chr5 (4-69)||(24033140-24033205)
chr5 (4-69)||(29154905-29154970)
chr5 (4-69)||(32706385-32706450)
chr5 (4-69)||(39886154-39886219)
chr5 (1-69)||(28871266-28871334)
chr5 (1-69)||(43580938-43581006)
[»] scaffold0117 (1 HSPs)
scaffold0117 (4-78)||(18412-18486)
[»] scaffold0128 (1 HSPs)
scaffold0128 (4-69)||(17683-17748)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-69)||(65729-65797)
[»] scaffold0690 (1 HSPs)
scaffold0690 (4-69)||(3729-3794)
[»] scaffold0366 (1 HSPs)
scaffold0366 (4-69)||(802-867)
[»] scaffold0187 (2 HSPs)
scaffold0187 (4-69)||(11062-11127)
scaffold0187 (4-69)||(21390-21455)
[»] scaffold0034 (1 HSPs)
scaffold0034 (4-69)||(94714-94779)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-69)||(59846-59911)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-69)||(112168-112236)


Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 100 - 385
Target Start/End: Complemental strand, 42848664 - 42848379
Alignment:
Q  100 gtgtatattaattaaattcttcatctaaatttttgcttaatcttttttcgtgtgtaaacataattcgatggtacataagtactaaactactcaggcatcg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42848664 gtgtatattaattaaattcttcatctaaatttttgcttaatcttttttcgtgtgtaaacataattcgatggtacataagtactaaactactcgggcatcg 42848565  T
Q  200 gaaattaggatgtacaatatctttgatttgcatttgctcaaatcataagcaacaatgataagatggtacatatttaactttagtctaattttttcaggtt 299  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42848564 gaaattaggatttacaatatctttgatttgcatttgctcaaatcataagcaacaatgataagatggtacatatttaactttagtctaattttttcaggtt 42848465  T
Q  300 gtactatgtacataatctgccgtggttctttgcctaattttttcggtttgtactttgtacataatctgccgtggttctctgctcct 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  42848464 gtactatgtacataatctgccgtggttctttgcctaattttttcggtttgtacttcgtacataatctgccgtggttctttgctcct 42848379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 5190788 - 5190723
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||| | |||||||||||||   ||||||||||||||||||||    
T  5190788 cccggacaccccacttctccacaattatattgtgtaagttctagccactaggctacttgaccaaaa 5190723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 7180621 - 7180556
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || |||| | ||||||||||||||| ||||    
T  7180621 cccggacaccccacttctccacaattaaattgtgtgagctctagtcactaggctacttgacaaaaa 7180556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 21265719 - 21265784
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  21265719 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 21265784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 48638599 - 48638660
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||| ||||||||||||| || ||||   ||||||||||||||||||||    
T  48638599 gacaccccacttctccacaattaaactgtgtgagctctagccactaggctacttgaccaaaa 48638660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12048134 - 12048066
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  12048134 aatcccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 12048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1570199 - 1570134
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  1570199 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 1570134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 6438071 - 6438006
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  6438071 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 6438006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 12502261 - 12502196
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  12502261 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 12502196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 15819608 - 15819543
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  15819608 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 15819543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 28564350 - 28564277
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaa 79  Q
    ||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| |||| || ||||||    
T  28564350 cggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaaaaaaaaagaa 28564277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 32594314 - 32594379
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  32594314 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 32594379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 40519550 - 40519485
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  40519550 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 40519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 46965803 - 46965868
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  46965803 cccggacactccacttctccataattaaattgtgtgagctctagccactaggctacttgaccaaaa 46965868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 12650390 - 12650326
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  12650390 ccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 12650326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13773228 - 13773296
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  13773228 aatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 13773296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 32589496 - 32589432
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaa 68  Q
    ||||| ||| ||||||||||| ||||||| ||||| || |||||  |||||||||||||||||||    
T  32589496 cccggtcactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaa 32589432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 42848746 - 42848686
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgac 64  Q
    ||||||||||||||||||||  ||||||| ||||| ||||||||  ||||| |||||||||    
T  42848746 cccggacaccccacttctccgcaattaaattgtgtgagttctaaccactagactacttgac 42848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 15390286 - 15390360
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaa 81  Q
    |||||| ||||||||||| |||| || ||||| |||||||   ||||||||||||||| |||| |||||| ||||    
T  15390286 ggacactccacttctccacaatttaattgtgtgagttctagccactaggctacttgacaaaaaaaagaaaaaaaa 15390360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 35605625 - 35605571
Alignment:
Q  9 acaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttga 63  Q
    |||||||||||||||| ||||||| ||||| || ||||  |||||||||||||||    
T  35605625 acaccccacttctccacaattaaattgtgtgagctctagctactaggctacttga 35605571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 40375322 - 40375244
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    ||||||||| | ||||||||| ||||||| ||||| || |||||  ||||||||||||||| |||| || ||| |||||    
T  40375322 cccggacactctacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaaaaaaaaaaaaaat 40375244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 42490417 - 42490355
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgacca 66  Q
    ||||||||||||||||||||| ||||||| ||||| |  |||||  ||||||||||| |||||    
T  42490417 cccggacaccccacttctccacaattaaattgtgtgaactctaaccactaggctactcgacca 42490355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 1151822 - 1151887
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| |||||||| || ||||||| ||||| || |||| | ||||||||||||||| ||||    
T  1151822 cccggacactccacttcttcacaattaaattgtgtgagctctagtcactaggctacttgacaaaaa 1151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 7166234 - 7166169
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| |||| || ||||| || ||||   ||||||||||||||||||||    
T  7166234 cccggacactccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaa 7166169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 7191095 - 7191160
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||| |||||||||| ||||||| ||||| || ||||   ||||| ||||||||||||||    
T  7191095 cccggacacctcacttctccacaattaaattgtgtgagctctagccactagcctacttgaccaaaa 7191160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 8984513 - 8984448
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  8984513 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 8984448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 12374521 - 12374456
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||| || ||||||| ||||| || |||| | |||| |||||||||| ||||    
T  12374521 cccggacaccccacttcttcacaattaaattgtgtgagctctagtcactatgctacttgacaaaaa 12374456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 16526184 - 16526119
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  16526184 cccgtacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 16526119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19063340 - 19063275
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| |||| || ||||| || ||||| |||||  ||||||||| ||||    
T  19063340 cccggacaccccacttctccacaatttaattgtgtgagctctaactactaaactacttgacaaaaa 19063275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 33033193 - 33033254
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||| ||||||| ||||| || |||||  ||||| ||||||||||||||    
T  33033193 gacaccccatttctccacaattaaaatgtgtgagctctaaccactagactacttgaccaaaa 33033254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 34058277 - 34058342
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   | ||||||||||||||||||    
T  34058277 cccggacactccacttctccacaattaaattgtgtgagctctagccattaggctacttgaccaaaa 34058342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 39346986 - 39346921
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| |||||||   ||||||||| ||||| ||||    
T  39346986 cccggacactccacttctccacaattaaattgtgtgagttctagccactaggctatttgacaaaaa 39346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 44732696 - 44732761
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| |  ||||   ||||| ||||||||||||||    
T  44732696 cccggacaccccacttctccacaattaaattgtgtgaactctagccactagactacttgaccaaaa 44732761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6213481 - 6213549
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| || ||||||| ||||| |||||||   ||||| ||||||||| ||||    
T  6213481 aatcccggataccccacttcttcacaattaaattgtgtgagttctagccactagactacttgacaaaaa 6213549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27234047 - 27234115
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||| |||| ||||||||||| ||||||| ||||| || ||||  | |||| ||||||||||||||    
T  27234047 aatcccgaacactccacttctccacaattaaattgtgtgagctctagctgctagactacttgaccaaaa 27234115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 48897123 - 48897059
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| ||||||||||| |||| || ||||| || |||||  ||||||||||||||| ||||    
T  48897123 ccggacactccacttctccataatttaattgtgtgagctctaaccactaggctacttgacaaaaa 48897059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 43085230 - 43085165
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| |||||||| |||||  ||||||||||||||||||||    
T  43085230 cccggacactccacttctccacaattaaattgtgtaagctctaaccactaggctacttgaccaaaa 43085165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10568148 - 10568213
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  10568148 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 10568213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11875949 - 11876014
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  11875949 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 11876014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11890956 - 11891021
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  11890956 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 11891021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 34413125 - 34413190
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  34413125 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 34413190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17698582 - 17698650
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  17698582 aatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 17698650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27077107 - 27077039
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||||||| ||||||| ||||| || || ||  | ||||||||||||||||||    
T  27077107 aatcccggacaccccacttctccacaattaaattgtgtgagctcgaaccattaggctacttgaccaaaa 27077039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 42801654 - 42801591
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||  ||||| ||||||||| ||||    
T  42801654 cggacaccccacttctccataattaaattgtgtgagttctaaccactagactacttgacaaaaa 42801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 43186916 - 43186990
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaaga 78  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||||||| || |||||    
T  43186916 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaaaaaaaaaga 43186990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 94518 - 94453
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  94518 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 94453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 2787088 - 2787023
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  2787088 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 2787023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 5328574 - 5328509
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||| |||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  5328574 cccggacacctcacttctccacaattaaaatgtgtgagctctagccactaggctacttgaccaaaa 5328509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17027888 - 17027823
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  17027888 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 17027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17558324 - 17558259
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  17558324 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 17558259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21548504 - 21548439
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  21548504 cccgaacaccccacttctccacaattaaaatgtgtgagctctagccactaggctacttgaccaaaa 21548439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28909528 - 28909593
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  28909528 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 28909593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 29716923 - 29716988
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  || |||||||||||||||||    
T  29716923 cccggacactccacttctccacaattaaattgtgtgagctctaaccacgaggctacttgaccaaaa 29716988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 37290985 - 37291050
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   |||||||||||| |||||||    
T  37290985 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttaaccaaaa 37291050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 37717426 - 37717491
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  37717426 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 37717491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 38219575 - 38219510
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  38219575 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 38219510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 44340352 - 44340287
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || | || | ||||||||||||||||||||    
T  44340352 cccggacactccacttctccacaattaaattgtgtgagctatagtcactaggctacttgaccaaaa 44340287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 8034415 - 8034359
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgac 64  Q
    ||||||||||||||||| ||||||| ||||| |||||||   |||||||||||||||    
T  8034415 gacaccccacttctccacaattaaattgtgtgagttctagccactaggctacttgac 8034359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29170825 - 29170893
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| |||||||||||||| ||||||| ||||| |||||||   ||||| ||||||||| ||||    
T  29170825 aatcccggataccccacttctccacaattaaattgtgtgagttctagccactagactacttgacaaaaa 29170893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33604188 - 33604120
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| |||||||   ||||| | ||||||||||||    
T  33604188 aatcccggacactccacttctccacaattaaattgtgtgagttctagccactagacaacttgaccaaaa 33604120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 10736881 - 10736803
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||| ||| || ||| |||||    
T  10736881 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacccaaaaaaaaaaaaaaat 10736803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32719618 - 32719556
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttga 63  Q
    |||||||||||| |||||| |||| ||||||| ||||| || |||||  ||||||||||||||    
T  32719618 aatcccggacactccacttttccacaattaaattgtgtgagctctaaccactaggctacttga 32719556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 35939553 - 35939615
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||| ||| ||||||| ||||| |||||||   |||| |||||||||||||||    
T  35939553 ggacaccccacttcaccacaattaaattgtgtgagttctagccactaagctacttgaccaaaa 35939615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 39587613 - 39587675
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  39587613 ggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 39587675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 257602 - 257667
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||  ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  257602 cccggacattccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 257667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 658318 - 658253
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||  ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  658318 cccggacattccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 658253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 844054 - 843989
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||  ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  844054 cccggacattccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 843989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1337122 - 1337057
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||| ||||||||||    
T  1337122 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctatttgaccaaaa 1337057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1632447 - 1632382
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| | ||||||||| ||||||| ||||| || |||||  |||||| |||||||||||||    
T  1632447 cccggacactctacttctccacaattaaattgtgtgagctctaaccactaggttacttgaccaaaa 1632382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 5570957 - 5571022
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| | ||| || ||||   ||||| ||||||||||||||    
T  5570957 cccggacaccccacttctccacaattaaattatgtgagctctagccactagactacttgaccaaaa 5571022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8265331 - 8265396
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| |||| || ||||| || ||||   ||||||||||||||||||||    
T  8265331 cccggacactccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaa 8265396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11787214 - 11787279
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| | ||| || |||||  ||||||||||||||| ||||    
T  11787214 cccggacactccacttctccacaattaaattatgtgagctctaaccactaggctacttgactaaaa 11787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17072570 - 17072505
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  17072570 cccgaacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 17072505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 17575701 - 17575766
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  17575701 cccgaacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 17575766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 29514689 - 29514754
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  29514689 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 29514754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 29729186 - 29729247
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| ||||||||||| |||| || ||||| || |||| | ||||||||||||||||||||    
T  29729186 gacactccacttctccacaatttaattgtgtgagctctagtcactaggctacttgaccaaaa 29729247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 35818123 - 35818187
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||| ||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  35818123 cccggacactccact-ctccataattaaattgtgtgagctctaaccactaggctacttgaccaaaa 35818187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 7763945 - 7763881
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| ||||||| ||||| || ||||   |||| |||||||||| ||||    
T  7763945 ccggacaccccacttctccacaattaaattgtgtgagctctagccactaagctacttgacaaaaa 7763881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11900453 - 11900385
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||| ||||| |||||| ||||||| |||||   ||||| | ||||||||||||||| ||||    
T  11900453 aatcccggacatcccacctctccacaattaaattgtgtgcattctagtcactaggctacttgacaaaaa 11900385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 31450963 - 31450899
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  31450963 ccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 31450899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32258067 - 32258135
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| |||||||||||||||||| ||||||| ||||| || |||||  ||||  ||||||||| ||||    
T  32258067 aatcctggacaccccacttctccacaattaaattgtgtgagctctaaccactaaactacttgacaaaaa 32258135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 29284329 - 29284394
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| |||||||||||||   ||||||||||||||| ||||    
T  29284329 cccggacaccccacttctccacaattaaattgtgtaagttctagccactaggctacttgacaaaaa 29284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 8297690 - 8297768
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    ||||||||||||||||||||| ||||||| ||||| || |||||  ||||||| |||||||||||| || ||| |||||    
T  8297690 cccggacaccccacttctccacaattaaattgtgtgagctctaaccactaggccacttgaccaaaacaaaaaaaaaaat 8297768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28222925 - 28222990
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  28222925 cccggacactccacttctccataattaaattgtgtgagctctaaccactaggctacttgaccaaaa 28222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 2816954 - 2817018
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  2816954 ccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 2817018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 19618733 - 19618657
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaa 80  Q
    ||||||||||||||||||||| ||||||| ||| | || || ||  |||||||||||||||||||| || |||||||    
T  19618733 cccggacaccccacttctccacaattaaattgtatgagctcgaaccactaggctacttgaccaaaaaaaaaaagaaa 19618657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 216271 - 216334
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  216271 cggacaccccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 216334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 33646900 - 33646963
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  33646900 cggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 33646963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 15449567 - 15449505
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| ||| ||| ||||| || ||||| |||||||||||||||||||||    
T  15449567 ggacactccacttctccacaatgaaattgtgtgagctctaactactaggctacttgaccaaaa 15449505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 978140 - 978078
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||  |||| |||||||||||||||    
T  978140 ccggacaccccacttctccacaattaaattgtg--agttctaaccactaagctacttgaccaaaa 978078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 7177362 - 7177423
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||| |||||||| |||| || ||||   ||||||||||||||||||||    
T  7177362 gacaccccacttctccacaattaaacagtgtgagctctagccactaggctacttgaccaaaa 7177423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 9888532 - 9888467
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| | ||| || |||||  ||||||||||||||||||||    
T  9888532 cccggacactccacttctccacaattaaattatgtgagctctaaccactaggctacttgaccaaaa 9888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10934662 - 10934727
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| |||||||   |||||||||||| |||||||    
T  10934662 cccggacactccacttctccacaattaaattgtgtgagttctagccactaggctacttcaccaaaa 10934727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 13116631 - 13116566
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| |||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  13116631 cccggacacccctcttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 13116566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19953835 - 19953770
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  19953835 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 19953770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 28148740 - 28148675
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  28148740 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 28148675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 7207907 - 7207978
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaa 75  Q
    ||||||||| ||| ||||||| ||||||| ||||| || ||||   |||||||||||||||||||| |||||    
T  7207907 cccggacactccatttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaaaaagaa 7207978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 15963947 - 15963885
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| |||| || ||||| |||||||   ||||||||||||||||||||    
T  15963947 ggacactccacttctccacaatttaattgtgtgagttctagccactaggctacttgaccaaaa 15963885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3794180 - 3794115
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  3794180 cccgcacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 3794115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 6210121 - 6210182
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| ||||||||||| |||| || ||||| ||||||||  |||| |||||||||||||||    
T  6210121 gacactccacttctccacaatttaattgtgtgagttctaaccactatgctacttgaccaaaa 6210182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 7328650 - 7328589
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  7328650 gacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 7328589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 8857154 - 8857211
Alignment:
Q  12 ccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  8857154 ccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 8857211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 9246389 - 9246324
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  9246389 cccgcacactccacttctccacaattaaattgtgtgagatctagccactaggctacttgaccaaaa 9246324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10517262 - 10517327
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  10517262 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 10517327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 13732874 - 13732939
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| | ||||||||| ||||||| ||| | || |||||  ||||||||||||||||||||    
T  13732874 cccggacactctacttctccacaattaaattgtatgagctctaaccactaggctacttgaccaaaa 13732939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17441846 - 17441781
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||| |||||    
T  17441846 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgatcaaaa 17441781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 24618502 - 24618441
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| |||| ||||||| ||||| |||||||   ||||| ||||||||||||||    
T  24618502 gacaccccacttttccacaattaaattgtgtgagttctagccactagactacttgaccaaaa 24618441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 27218947 - 27219012
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  27218947 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 27219012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 30705023 - 30705088
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   || ||||||||||| |||||    
T  30705023 cccggacaccccacttctccacaattaaattgtgtgagctctagccaccaggctacttgatcaaaa 30705088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 31802116 - 31802181
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||| ||||||||||||||    
T  31802116 cccggacactccacttctccacaattaaattgtgtgagctctagccactagactacttgaccaaaa 31802181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 32611561 - 32611496
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  32611561 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 32611496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 34040739 - 34040800
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| || ||||||| ||||||| ||||| || ||||| ||||||| |||||||||||||    
T  34040739 gacacctcatttctccacaattaaattgtgtgaggtctaactactaggttacttgaccaaaa 34040800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 9372205 - 9372149
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttga 63  Q
    |||||| ||||||||||| |||| || ||||| |||||||  |||||||||||||||    
T  9372205 ggacactccacttctccacaatttaattgtgtgagttctagctactaggctacttga 9372149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 30057285 - 30057350
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  30057285 cccggacaccccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 30057350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 36132292 - 36132367
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaa 79  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  |||||||||||||||||||| || ||||||    
T  36132292 cccggacactccacttctccacaattaaattgtgtgaggtctaaccactaggctacttgaccaaaaaaaaaaagaa 36132367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3036062 - 3035997
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  3036062 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 3035997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3847744 - 3847809
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| |||||||   ||||||||||||||||||||    
T  3847744 cccggacactccacttctccacaattaaattgtgtgagttctagccactaggctacttgaccaaaa 3847809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8965157 - 8965222
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||| | ||||||| ||||| || |||||  ||||||||||||||||||||    
T  8965157 cccggacaccccacttctctacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 8965222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40994113 - 40994045
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  40994113 aatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 40994045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 54029613 - 54029681
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || |||| | ||||||||||||||| ||||    
T  54029613 aatcccggacactccacttctccacaattaaattgtgtgagctctagtcactaggctacttgacaaaaa 54029681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 56087964 - 56087896
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||   ||||| ||||||||| ||||    
T  56087964 aatcccggacaccccacttctccacaattaaattgtgtgagttctagccactagactacttgacaaaaa 56087896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 43147391 - 43147313
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||||||| || ||| |||||    
T  43147391 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaaaaaaaaaaaaaat 43147313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 626989 - 626924
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  626989 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 626924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1458025 - 1457960
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  |||||||||||| |||||||    
T  1458025 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctactttaccaaaa 1457960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 2222602 - 2222663
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgacc 65  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||    
T  2222602 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacc 2222663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10141046 - 10141111
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  10141046 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 10141111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 18360556 - 18360621
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| ||||||||  ||| | ||||||||||||||    
T  18360556 cccggacactccacttctccacaattaaattgtgtgagttctaaccactggactacttgaccaaaa 18360621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 25235800 - 25235739
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| ||||||||||| |||| || ||||| |||||||  |||||||||||||||||||||    
T  25235800 gacactccacttctccacaatttaattgtgtgagttctagctactaggctacttgaccaaaa 25235739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 27743722 - 27743657
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||| ||||||||| ||||||| ||||| | |||||| |||||| ||||||||| ||||    
T  27743722 cccggacaccctacttctccacaattaaattgtgtgatttctaactactagactacttgacaaaaa 27743657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 34353842 - 34353907
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| | ||| || | |||  ||||||||||||||||||||    
T  34353842 cccggacaccccacttctccacaattaaattatgtgagctgtaaccactaggctacttgaccaaaa 34353907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 36602373 - 36602308
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| ||||||||  ||| | ||||||||||||||    
T  36602373 cccggacactccacttctccacaattaaattgtgtgagttctaaccactggactacttgaccaaaa 36602308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 42231575 - 42231640
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||| | ||||||||||||||| ||||    
T  42231575 cccggacactccacttctccacaattaaattgtgtgagctctagtcactaggctacttgacaaaaa 42231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 43596958 - 43597023
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  43596958 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 43597023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 46775037 - 46774972
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  46775037 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 46774972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 48615479 - 48615414
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| || ||||||||||| ||||||| ||||| || |||| | ||||||||||||||||||||    
T  48615479 cccggatactccacttctccacaattaaattgtgtgagctctagtcactaggctacttgaccaaaa 48615414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 48950847 - 48950912
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  48950847 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 48950912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 49901545 - 49901610
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| |||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  49901545 cccggacaccccgcttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 49901610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 53634258 - 53634193
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  53634258 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 53634193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 9761178 - 9761246
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaa 72  Q
    |||||||||  |||||||||| ||||||| ||||| || |||||  ||||| |||||||||||||||||    
T  9761178 cccggacacttcacttctccacaattaaattgtgtgagctctaaccactagactacttgaccaaaagaa 9761246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 46562707 - 46562771
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| | ||||| | |||||| |||||| ||||| ||||||||| ||||    
T  46562707 ccggacaccccacttctccatatttaaaatatgtaagctctaatcactagactacttgacaaaaa 46562771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 39023241 - 39023303
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| |||| || |||||||||||||   ||||||||||||||| ||||    
T  39023241 ggacactccacttctccacaatttaattgtgtaagttctagccactaggctacttgacaaaaa 39023303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 48744273 - 48744335
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| |||| || ||||| |||||||   ||||||||||||||||||||    
T  48744273 ggacactccacttctccacaatttaattgtgtgagttctagccactaggctacttgaccaaaa 48744335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 4700945 - 4700880
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| |||||||||||| |||| || ||||| || ||||   ||||||||||||||||||||    
T  4700945 cccggacatcccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaa 4700880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 5305017 - 5304952
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  5305017 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 5304952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 6371177 - 6371242
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| |||||||| || ||||||| ||||| || ||||   ||||||||||||||||||||    
T  6371177 cccggacactccacttcttcacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 6371242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10402504 - 10402569
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||| |||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  10402504 cccggacacctcacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 10402569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 12582035 - 12581970
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  12582035 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 12581970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17709467 - 17709402
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||| | ||||||| ||||| || |||| | ||||||||||| ||||||||    
T  17709467 cccggacactccacttctctacaattaaattgtgtgagctctagtcactaggctactagaccaaaa 17709402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 26868411 - 26868476
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || | ||   ||||||||||||||||||||    
T  26868411 cccggacactccacttctccacaattaaattgtgtgagctttagccactaggctacttgaccaaaa 26868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 40051689 - 40051750
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  40051689 gacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 40051750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 43271720 - 43271659
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||| ||||||| ||||| || | ||   ||||||||||||||||||||    
T  43271720 gacaccccacttctccacaattaaattgtgtgagctatagccactaggctacttgaccaaaa 43271659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 45112118 - 45112054
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||| |  ||||||||||||||||||||    
T  45112118 cccggacactccacttctccataattaaattgtgtgagctct-agcactaggctacttgaccaaaa 45112054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 53376686 - 53376621
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| |||||||  |||| || ||||  |||||| ||||||||||||||    
T  53376686 cccggacactccacttctccacaattaaatcgtgtgagctctagctactagactacttgaccaaaa 53376621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 55251358 - 55251293
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   || |||||||||||||||||    
T  55251358 cccggacactccacttctccacaattaaattgtgtgagctctagccaccaggctacttgaccaaaa 55251293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2688156 - 2688223
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||| ||||||| | ||||| ||||| || ||||   ||||||||||||||||||||    
T  2688156 aatcccggacaccccatttctccacatttaaa-tgtgtgagctctagccactaggctacttgaccaaaa 2688223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 37318140 - 37318100
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaa 47  Q
    |||||||||||||||||| ||||||| ||||| ||||||||    
T  37318140 ggacaccccacttctccacaattaaattgtgtgagttctaa 37318100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48949689 - 48949757
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| |||| || ||||| || ||||   | ||||||||||||||||||    
T  48949689 aatcccggacactccacttctccacaatttaattgtgtgagctctagccaataggctacttgaccaaaa 48949757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 10833 - 10768
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  10833 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 10768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 27937 - 27872
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| |||||||   ||||||||||||||||||||    
T  27937 cccggacactccacttctccacaattaaattgtgtgagttctagccactaggctacttgaccaaaa 27872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 23423 - 23488
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  23423 cccggacactccacttctccataattaaattgtgtgagctctaaccactaggctacttgaccaaaa 23488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3766874 - 3766939
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  3766874 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 3766939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 9877274 - 9877209
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||   |||||||| |||||||||||    
T  9877274 cccggacaccccacttctccacaattaaattgtgtgagttctagccactaggctccttgaccaaaa 9877209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 10244896 - 10244831
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  10244896 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 10244831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 23102565 - 23102500
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||   |||||||||| |||||||||    
T  23102565 cccggacaccccacttctccacaattaaattgtgtgagttctagccactaggctacctgaccaaaa 23102500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 32074402 - 32074337
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||  |||||||||||||||||||||    
T  32074402 cccggacactccacttctccacaattaaattgtgtgagctctagctactaggctacttgaccaaaa 32074337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 43119436 - 43119374
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  43119436 ggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 43119374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3062837 - 3062902
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  3062837 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 3062902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 26122093 - 26122158
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||| || ||||||||||||| ||||    
T  26122093 cccggacactccacttctccacaattaaattgtgtgagctctaactagtaggctacttgacaaaaa 26122158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 29617468 - 29617533
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  29617468 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 29617533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 35950191 - 35950256
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  35950191 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 35950256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 44616665 - 44616730
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||| ||||||||||||||    
T  44616665 cccggacactccacttctccacaattaaattgtgtgagctctaaccactagactacttgaccaaaa 44616730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 12615815 - 12615879
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||| |||||||| ||||||| ||||| || |||||  ||||| ||||||||||||||    
T  12615815 ccggacaccccgcttctccacaattaaattgtgtgagctctaaccactagactacttgaccaaaa 12615879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42443749 - 42443817
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||  ||||| || ||||   ||||||||||||||||||||    
T  42443749 aatcccggacactccacttctccacaattaagttgtgtgagctctagccactaggctacttgaccaaaa 42443817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 45640098 - 45640034
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| ||||||||| | ||||||| ||||| || |||| | ||||||||||||||||||||    
T  45640098 ccggacactccacttctctataattaaattgtgtgagctctagtcactaggctacttgaccaaaa 45640034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47999840 - 47999908
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   | ||||||||||||||||||    
T  47999840 aatcccggacactccacttctccataattaaattgtgtgagctctagccattaggctacttgaccaaaa 47999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 1563746 - 1563687
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttga 63  Q
    ||||||||||||||||||| | ||||||| ||||| || |||||  ||||||||||||||    
T  1563746 cccggacaccccacttctctacaattaaattgtgtgagctctaaccactaggctacttga 1563687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 42548033 - 42547970
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||| | ||||||||| ||||||| ||||| ||||||||  | ||||||||||||||||||    
T  42548033 cggacactctacttctccacaattaaattgtgtgagttctaaccattaggctacttgaccaaaa 42547970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 19752972 - 19752910
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| |||| || ||||| |||||||   ||||||||||||||||||||    
T  19752972 ggacactccacttctccacaatttaattgtgtgagttctagccactaggctacttgaccaaaa 19752910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 35645665 - 35645727
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  35645665 ggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 35645727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 47463996 - 47464066
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaa 76  Q
    ||||||||||||||||||| ||||||| ||||| |  ||||   ||||||||||||||| |||| ||||||    
T  47463996 cggacaccccacttctccacaattaaattgtgtgatctctatccactaggctacttgacaaaaaaaagaaa 47464066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 12640592 - 12640531
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  12640592 gacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 12640531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19331507 - 19331442
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| |||| || ||||| || ||||   ||||||||||||||||||||    
T  19331507 cccggacactccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaa 19331442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24781093 - 24781158
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| || ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  24781093 cccggatactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 24781158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 26801736 - 26801671
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| |||||||| || ||||||| ||||| || ||||   ||||||||||||||||||||    
T  26801736 cccggacactccacttcttcacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 26801671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28805363 - 28805428
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| || || || |||||  ||||| ||||||||| ||||    
T  28805363 cccggacaccccacttctccacaattaaattgagtgagctctaaccactagactacttgactaaaa 28805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 31026282 - 31026347
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  31026282 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 31026347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 31077910 - 31077845
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||| ||||||||||||||    
T  31077910 cccggacactccacttctccacaattaaattgtgtgagctctagccactagactacttgaccaaaa 31077845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 32619413 - 32619478
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  32619413 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 32619478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 32676949 - 32676884
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||| |||||||||||||||    
T  32676949 cccggacactccacttctccacaattaaattgtgtgagctctagccactaagctacttgaccaaaa 32676884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 34267558 - 34267493
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||  |||||||||| ||||||| ||||| || |||| | ||||||||||||||| ||||    
T  34267558 cccggacacttcacttctccacaattaaattgtgtgagctctagtcactaggctacttgacaaaaa 34267493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 36391911 - 36391846
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||| ||||||||||||||||    
T  36391911 cccggacactccacttctccacaattaaattgtgtgagctctagccactgggctacttgaccaaaa 36391846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40705897 - 40705962
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||| ||| ||||||| ||||| || |||| ||| ||||||||||||| ||||    
T  40705897 cccggacactccacttcgccacaattaaattgtgtgagctctagttattaggctacttgacaaaaa 40705962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 45669780 - 45669715
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||| ||||||| ||||||| ||||| || ||||  |||||||||||||||| ||||    
T  45669780 cccggacactccatttctccacaattaaattgtgtgagctctatctactaggctacttgacaaaaa 45669715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 48119533 - 48119598
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| |||| || ||||| || ||||   ||||||||||||||||||||    
T  48119533 cccggacactccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaa 48119598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 48674569 - 48674504
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||| | ||||| |||||| |||||||    
T  48674569 cccggacactccacttctccataattaaattgtgtgagctctagtcactagactacttaaccaaaa 48674504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 9906123 - 9906059
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||  ||||||||||| ||||||| ||| | || ||||| |||||||||||| ||||||||    
T  9906123 ccggacattccacttctccacaattaaattgtatgagctctaactactaggctactcgaccaaaa 9906059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 27679019 - 27678967
Alignment:
Q  2 atcccggacaccccacttctccaaaattaaactgtgtaagttctaattactag 54  Q
    |||||||||||| |||||||||| ||||||| | ||| ||||||||| |||||    
T  27679019 atcccggacaccgcacttctccacaattaaattatgtgagttctaatcactag 27678967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 28501225 - 28501285
Alignment:
Q  9 acaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||| ||||||| ||||| || |||||  ||||  ||||||||||||||    
T  28501225 acaccccacttctccacaattaaattgtgtgagctctaaccactaaactacttgaccaaaa 28501285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 34051877 - 34051817
Alignment:
Q  9 acaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||| ||||||| ||||| ||||||||  | ||| ||||||||| ||||    
T  34051877 acaccccacttctccacaattaaattgtgtgagttctaaccaatagactacttgacaaaaa 34051817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43633100 - 43633032
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||| |||||| ||||    
T  43633100 aatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctgcttgacaaaaa 43633032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 32429814 - 32429875
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  32429814 gacaccccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 32429875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 41936414 - 41936349
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  41936414 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 41936349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 51155095 - 51155034
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||| ||||||| ||||| || ||||| |||||||||||||||| ||||    
T  51155095 gacaccccacttctccacaattaaattgtgtgagctctaactactaggctacttgacaaaaa 51155034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 53432744 - 53432679
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  53432744 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 53432679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 39719998 - 39720061
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaa 67  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||    
T  39719998 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaa 39720061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 4139063 - 4139141
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||||||| || ||| |||||    
T  4139063 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaaaaaaaaaaaaaat 4139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 2522989 - 2523054
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  2522989 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 2523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 15975415 - 15975350
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  15975415 cccgaacactccacttctccataattaaattgtgtgagctctaaccactaggctacttgaccaaaa 15975350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 18194401 - 18194466
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  18194401 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 18194466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 30555234 - 30555169
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  30555234 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 30555169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 33706734 - 33706669
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  33706734 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 33706669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 34102618 - 34102553
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||||||||| || ||||   |||||| |||||||| ||||    
T  34102618 cccggacaccccacttctccacaattaaactgtgtgagctctagccactaggttacttgacaaaaa 34102553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 37800618 - 37800553
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  37800618 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 37800553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 40933838 - 40933773
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  40933838 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 40933773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 50496821 - 50496756
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  50496821 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 50496756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 53163657 - 53163722
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||  ||||||| ||||| || ||||   ||||||||||||||||||||    
T  53163657 cccggacaccccacttctccgcaattaaattgtgtgagctctagccactaggctacttgaccaaaa 53163722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 7270019 - 7270083
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  7270019 ccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 7270083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 10482859 - 10482795
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  10482859 ccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 10482795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 4860228 - 4860287
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaa 67  Q
    ||||||||||||||||| ||||||| ||||| || |||||  ||||| ||||||||||||    
T  4860228 gacaccccacttctccacaattaaattgtgtgagctctaaccactagactacttgaccaa 4860287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 4880236 - 4880295
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaa 67  Q
    ||||||||||||||||| ||||||| ||||| || |||||  ||||| ||||||||||||    
T  4880236 gacaccccacttctccacaattaaattgtgtgagctctaaccactagactacttgaccaa 4880295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 10349465 - 10349528
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  10349465 cggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 10349528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 5636803 - 5636741
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| | ||||||||| ||||||| ||||| || |||| | ||||||||||||||||||||    
T  5636803 ggacactcgacttctccacaattaaattgtgtgagctctagtcactaggctacttgaccaaaa 5636741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 11436570 - 11436624
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctactt 61  Q
    |||||||||||||||||| ||||||| ||||| ||||||||  |||||| |||||    
T  11436570 ggacaccccacttctccacaattaaattgtgtgagttctaaccactaggttactt 11436624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 17608323 - 17608261
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| |||| || ||||| |||||||   ||||||||||||||||||||    
T  17608323 ggacactccacttctccacaatttaattgtgtgagttctagccactaggctacttgaccaaaa 17608261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 37488467 - 37488405
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgacca 66  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||||    
T  37488467 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacca 37488405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 42108189 - 42108111
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    ||||||| ||||||||||||| ||||||| ||||| |||||| |  ||||||||| ||||| |||| || ||| |||||    
T  42108189 cccggacgccccacttctccacaattaaattgtgtgagttcttaccactaggctatttgacaaaaaaaaaaaaaaaaat 42108111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 48251638 - 48251700
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  48251638 ggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 48251700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 50675746 - 50675684
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  50675746 ggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 50675684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 2007090 - 2007025
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  2007090 cccggacactccacttctccacaattaaattgtgtgagctctatccactaggctacttgacaaaaa 2007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 6919970 - 6919905
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  6919970 cccgaacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 6919905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 14795174 - 14795239
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| | ||||| ||||| || || ||  ||| ||||||||||||||||    
T  14795174 cccggacaccccacttctccacatttaaaatgtgtgagctccaaccactcggctacttgaccaaaa 14795239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 31327508 - 31327443
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| || ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  31327508 cccggaaactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 31327443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31587007 - 31587044
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgt 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  31587007 aatcccggacaccccacttctccacaattaaattgtgt 31587044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 32144647 - 32144712
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||| ||||||| ||||||| ||||| || ||||   |||||| |||||||||||||    
T  32144647 cccggacaccccatttctccacaattaaattgtgtgagctctagccactaggttacttgaccaaaa 32144712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 33606947 - 33606882
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| |||| || ||||| || ||||   ||||||||||||||||||||    
T  33606947 cccggacactccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaa 33606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40548366 - 40548431
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||| ||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  40548366 cccggacactccatttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 40548431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 45551816 - 45551751
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||| |||||||||    
T  45551816 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacctgaccaaaa 45551751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 52974060 - 52973995
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||| ||||||||||||||||    
T  52974060 cccggacactccacttctccacaattaaattgtgtgagctctagccactgggctacttgaccaaaa 52973995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 4640482 - 4640422
Alignment:
Q  9 acaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||||||| || ||||||| ||||| || |||||| ||||||||||||||| ||||    
T  4640482 acactccacttcttcacaattaaattgtgtgagctctaatcactaggctacttgacaaaaa 4640422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11206050 - 11206118
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| |||||||||||||| | ||||| ||||| || ||||   ||||||||||||||| ||||    
T  11206050 aatcccggataccccacttctccacagttaaattgtgtgagctctagccactaggctacttgacaaaaa 11206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 34898770 - 34898702
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaa 76  Q
    ||||||||||||||||| ||||||| ||||| || ||||   |||||  ||||||||||||| ||||||    
T  34898770 gacaccccacttctccacaattaaattgtgtgagctctagccactagattacttgaccaaaaaaagaaa 34898702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 43997644 - 43997584
Alignment:
Q  9 acaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| ||||||||||| ||||||| ||||| |||||||| |||| | ||||||||| ||||    
T  43997644 acactccacttctccacaattaaattgtgtgagttctaactactggactacttgacaaaaa 43997584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 52410244 - 52410180
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaa 72  Q
    ||||| ||||||||||| ||||||| ||||| || ||||   ||||| |||||||||||||||||    
T  52410244 gacactccacttctccacaattaaattgtgtgagctctagccactagactacttgaccaaaagaa 52410180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 5613017 - 5613082
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| |||| || ||||| || |||||  ||||||||||||||||||||    
T  5613017 cccggacaccccacttctccacaatttaattgtgtgagctctaaccactaggctacttgaccaaaa 5613082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 36182705 - 36182770
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||||||||    
T  36182705 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgaccaaaa 36182770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 6331624 - 6331696
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaa 76  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||||||| ||||||    
T  6331624 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaaaaagaaa 6331696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18073803 - 18073871
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| ||||||| | ||||||||| ||||| ||||    
T  18073803 aatcccggacactccacttctccacaattaaattgtgtgagttctagtcactaggctatttgacaaaaa 18073871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 38400380 - 38400442
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  38400380 ggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 38400442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1232252 - 1232297
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttcta 46  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||    
T  1232252 aatcccggacactccacttctccataattaaattgtgtaagttcta 1232297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 1260247 - 1260312
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| |||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  1260247 cccggacaccccgcttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 1260312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1309133 - 1309068
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  1309133 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 1309068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 13773463 - 13773528
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  13773463 cccggacactccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 13773528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 33228940 - 33228879
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgacc 65  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||||    
T  33228940 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacc 33228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 41509579 - 41509644
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  41509579 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 41509644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18278427 - 18278359
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||| ||||||||||    
T  18278427 aatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctatttgaccaaaa 18278359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18694845 - 18694913
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  18694845 aatcccagacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 18694913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 1844882 - 1844945
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  1844882 cggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 1844945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 17499014 - 17499077
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  17499014 cggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 17499077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41566822 - 41566896
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaa 75  Q
    |||||| ||||| ||||||||||| |||| || ||||| || ||||   |||||||||||||||||||| |||||    
T  41566822 aatcccagacactccacttctccacaatttaattgtgtgagctctagccactaggctacttgaccaaaaaaagaa 41566896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 1071533 - 1071598
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| |||||  | ||||   ||||||||||||||||||||    
T  1071533 cccggacactccacttctccacaattaaattgtgtgtgctctagccactaggctacttgaccaaaa 1071598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 20296481 - 20296542
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgacc 65  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||    
T  20296481 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacc 20296542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 27913473 - 27913412
Alignment:
Q  8 gacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| ||||||||||| |||| || |||||||| |||||  ||||||||||||||| ||||    
T  27913473 gacactccacttctccacaatttaattgtgtaagctctaaccactaggctacttgacaaaaa 27913412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 28153149 - 28153084
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||| ||||||||| ||||    
T  28153149 cccggacaccccacttctccacaattaaattgtgtgagctctagccactagactacttgacaaaaa 28153084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28194695 - 28194760
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   ||||||||| ||||| ||||    
T  28194695 cccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctatttgacaaaaa 28194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 40535456 - 40535395
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgacc 65  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||    
T  40535456 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacc 40535395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 5112849 - 5112793
Alignment:
Q  13 cccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||| ||||| || |||||  ||||||||||||||| ||||    
T  5112849 cccacttctccacaattaaattgtgtgagctctaaccactaggctacttgacaaaaa 5112793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 11050763 - 11050699
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| ||||||| ||||| || ||||   |||||| |||||||| ||||    
T  11050763 ccggacaccccacttctccataattaaattgtgtgagctctagccactaggttacttgacaaaaa 11050699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17034795 - 17034863
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| | ||| || ||||   ||||||||||||||| ||||    
T  17034795 aatcccggacactccacttctccacaattaaattatgtgagctctagccactaggctacttgacaaaaa 17034863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17089303 - 17089371
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| | ||| || ||||   ||||||||||||||| ||||    
T  17089303 aatcccggacactccacttctccacaattaaattatgtgagctctagccactaggctacttgacaaaaa 17089371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 33222159 - 33222127
Alignment:
Q  6 cggacaccccacttctccaaaattaaactgtgt 38  Q
    ||||||||||||||||||| |||||||||||||    
T  33222159 cggacaccccacttctccacaattaaactgtgt 33222127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 44857241 - 44857181
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgac 64  Q
    ||||||||| ||||||||||| |||| || |||||||| ||||   |||||||||||||||    
T  44857241 cccggacactccacttctccataatttaattgtgtaagctctagccactaggctacttgac 44857181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 6558865 - 6558929
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||| ||||||||| ||||||| ||||| || |||| | ||||||||||||||||||||    
T  6558865 ccggacaccctacttctccacaattaaattgtgtgagctctagtcactaggctacttgaccaaaa 6558929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 21918118 - 21918180
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| ||||||| ||||| || |||| | ||||||||||||||||||||    
T  21918118 ggacactccacttctccacaattaaattgtgtgagctctagtcactaggctacttgaccaaaa 21918180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 4745883 - 4745818
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  4745883 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 4745818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8968812 - 8968877
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  8968812 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 8968877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11795556 - 11795621
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  11795556 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 11795621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 12463819 - 12463884
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  12463819 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 12463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 25400374 - 25400309
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  25400374 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 25400309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36124459 - 36124527
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| |||| |||||||| || |||||  ||||| ||||||||| ||||    
T  36124459 aatcccggacactccacttctccacaatttaactgtgtgagctctaaccactagactacttgacaaaaa 36124527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41156392 - 41156456
Alignment:
Q  5 ccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||| ||||||||||| |||||||  |||| || |||| | ||||||||||||||||||||    
T  41156392 ccggacactccacttctccacaattaaatcgtgtgagctctagtcactaggctacttgaccaaaa 41156456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 13799428 - 13799366
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||| |||| ||||||| ||||||| ||||| |||||||  |||||||||||||||| ||||    
T  13799428 ggacatcccatttctccacaattaaattgtgtgagttctagctactaggctacttgacaaaaa 13799366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 18477475 - 18477413
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||| ||||||||||| ||||||| ||||| |  |||||| |||||||||||| |||||||    
T  18477475 ggacactccacttctccacaattaaattgtgtgaactctaatcactaggctacttaaccaaaa 18477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 24133026 - 24133084
Alignment:
Q  11 accccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||| ||||||| ||||| || |||| | ||||||||||||||| ||||    
T  24133026 accccacttctccacaattaaattgtgtgagctctagtcactaggctacttgactaaaa 24133084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 27765320 - 27765398
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaagaaaat 82  Q
    |||| |||| ||||||||||| ||||||| ||||| || ||||   |||||||||||||||||||| || ||| |||||    
T  27765320 cccgcacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaaaaaaaaaaaaaat 27765398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 29691423 - 29691485
Alignment:
Q  7 ggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  29691423 ggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 29691485  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 2301578 - 2301513
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||| ||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  2301578 cccggacactccatttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 2301513  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 4417692 - 4417627
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   || |||||||||||||||||    
T  4417692 cccggacactccacttctccacaattaaattgtgtgagctctagccaccaggctacttgaccaaaa 4417627  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 9835096 - 9835161
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  9835096 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 9835161  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 11774466 - 11774401
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||    |||||||||||||||||||    
T  11774466 cccggacactccacttctccacaattaaattgtgtgagctctagccgctaggctacttgaccaaaa 11774401  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11897311 - 11897376
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||| ||||||||||||||    
T  11897311 cccggacactccacttctccacaattaaattgtgtgagctctagccactagactacttgaccaaaa 11897376  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 14641116 - 14641051
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||  || ||||   ||||||||||||||||||||    
T  14641116 cccggacactccacttctccacaattaaattgtgcgagctctagccactaggctacttgaccaaaa 14641051  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 17064865 - 17064801
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||||||||||| | ||| || ||||| |||||||   ||||||||||||||||||||    
T  17064865 cccggacaccccacttctcc-acatttaattgtgtgagttctagccactaggctacttgaccaaaa 17064801  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21749385 - 21749320
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  21749385 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 21749320  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24033140 - 24033205
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   | ||||||||||||||||||    
T  24033140 cccggacacgccacttctccacaattaaattgtgtgagctctagccattaggctacttgaccaaaa 24033205  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 29154905 - 29154970
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| |||||||   |||| |||||||||| ||||    
T  29154905 cccggacactccacttctccacaattaaattgtgtgagttctagccactacgctacttgacaaaaa 29154970  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 32706385 - 32706450
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || |||| | | ||||||||||||| ||||    
T  32706385 cccggacactccacttctccacaattaaattgtgtgagctctagtcattaggctacttgacaaaaa 32706450  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 39886219 - 39886154
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||| ||||||||||||||    
T  39886219 cccggacactccacttctccacaattaaattgtgtgagctctagccactagactacttgaccaaaa 39886154  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28871334 - 28871266
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||  | ||||| ||||| ||||| ||  |||||||||| |||||||||    
T  28871334 aatcccggacactccacttctccgcatttaaaatgtgtgagttccaaccactaggctacctgaccaaaa 28871266  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43580938 - 43581006
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| ||||||||||| ||||||| ||||| || ||||   ||||| ||||||||| ||||    
T  43580938 aatcccggacactccacttctccacaattaaattgtgtgagctctagccactagactacttgacaaaaa 43581006  T

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Target: scaffold0117 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 18486 - 18412
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaagaagaaaga 78  Q
    ||||||||||||||||||||| ||||||| ||||| || ||||   | |||||||||||||||||| || |||||    
T  18486 cccggacaccccacttctccacaattaaattgtgtgagctctagccattaggctacttgaccaaaaaaaaaaaga 18412  T

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Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 17683 - 17748
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  17683 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 17748  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 65797 - 65729
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||||| |||||||| || |||| || ||||| || |||||| ||||||||||||||| ||||    
T  65797 aatcccggacactccacttcttcacaatttaattgtgtgagctctaatcactaggctacttgacaaaaa 65729  T

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Target: scaffold0690 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3729 - 3794
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||||||||||||| ||||    
T  3729 cccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 3794  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 867 - 802
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||  || ||||   ||||||||||||||||||||    
T  867 cccggacactccacttctccacaattaaattgtgcgagctctagccactaggctacttgaccaaaa 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 11127 - 11062
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   | ||||||||||||||||||    
T  11127 cccggacactccacttctccacaattaaattgtgtgagctctagccattaggctacttgaccaaaa 11062  T

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Target: scaffold0187; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21455 - 21390
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   | ||||||||||||||||||    
T  21455 cccggacactccacttctccacaattaaattgtgtgagctctagccattaggctacttgaccaaaa 21390  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 94714 - 94779
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||||||||| |||| ||||| ||||||| | |||||| |||| | ||||| ||||||||||||||    
T  94714 cccggacacctcactcctccacaattaaattatgtaagctctagtcactagactacttgaccaaaa 94779  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 59846 - 59911
Alignment:
Q  4 cccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    ||||||||| ||||||||||| ||||||| ||||| || ||||   ||||| ||||||||||||||    
T  59846 cccggacactccacttctccacaattaaattgtgtgagctctagccactagactacttgaccaaaa 59911  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 112168 - 112236
Alignment:
Q  1 aatcccggacaccccacttctccaaaattaaactgtgtaagttctaattactaggctacttgaccaaaa 69  Q
    |||| |||| || ||||||||||| ||||||| ||||| || ||||   ||||||||||||||||||||    
T  112168 aatctcggatactccacttctccacaattaaattgtgtgagctctagccactaggctacttgaccaaaa 112236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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