View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17152_high_53 (Length: 328)
Name: NF17152_high_53
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17152_high_53 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 31 - 311
Target Start/End: Complemental strand, 34678862 - 34678582
Alignment:
| Q |
31 |
atcgcaatatgcattgcaccaactataattagtcaacggtttattcgagaaaacaagaaaaaacagtatgttaagagtctcctcctttagatgagagatg |
130 |
Q |
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| T |
34678862 |
atcgcaatatgcattgcaccaactataattagtcaacattttatttgagaaaacaagaaaaaacagtatgttaagagtctcctcctttagatgagagatg |
34678763 |
T |
|
| Q |
131 |
acataaaaatatgtttataatttgggtaatactcacattacaagtcaattttgtgggtttgtgttagaccataccacaaattcattgttgatatcagaat |
230 |
Q |
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|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |
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| T |
34678762 |
acataaaaatatgtttataatttgggtaatcctcatattacaagtcaattttgtgggcttgtgttagaccataccacaaattcattgatgatatcagaat |
34678663 |
T |
|
| Q |
231 |
ctatccaagatttgttggaccacctactattaggttttcgatatcgaatcacgtaccatttattttcacgcaccaaatcca |
311 |
Q |
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||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |
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| T |
34678662 |
ctatccaagatttgttgaaccacctgctattaggttttcgatatcgagtcacgtaccatatattttcacgcaccaaatcca |
34678582 |
T |
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