View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17152_high_92 (Length: 220)
Name: NF17152_high_92
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17152_high_92 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 40757329 - 40757127
Alignment:
| Q |
1 |
taagttctctcagttattttttggttatatttgttacaacttacatgccatttaggaggtatttttctttcgcaaaagaaatatgtagaagaaattattg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40757329 |
taagttctctcagttattttttggttatatttgttacaacttacatgccatttaggaggtatttttctttcgcaaaagaaatatgtagaagaaattattg |
40757230 |
T |
|
| Q |
101 |
aacattgcaaggtatcacctacaccagttgacgtatacaaaggaaaaacttagtggttcatcaggaaactcaaatcatgatccaacaaatacactagcct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40757229 |
aacattgcaaggtatcacctacaccagttgacgtatacaaaggaaaaacttagtggttcatcaggaaactcaaatcatgatccaacaaatacactagcct |
40757130 |
T |
|
| Q |
201 |
tgc |
203 |
Q |
| |
|
||| |
|
|
| T |
40757129 |
tgc |
40757127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University