View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17152_high_96 (Length: 215)
Name: NF17152_high_96
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17152_high_96 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 29672568 - 29672386
Alignment:
| Q |
18 |
gtatggtccacgccgttaaattcacaaacggctccgtcagttactcttgccgcttcaccgaaacccaccgtttggcccaagaaaaagccctgggtcggcc |
117 |
Q |
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| T |
29672568 |
gtatggtccacgccgttaaattcacaaacggctccgtaagttactcttgccgcttcaccgaaacccaccgtttggcccaagaaaaagccctgggccggcc |
29672469 |
T |
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| Q |
118 |
cgtttttccaaaagccataggtgaacttcatggtcattcaggcatagcacgtttagcactttactatgctcgtagcctctgtg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29672468 |
cgtttttccaaaagccataggtgaacttcatggtcattcaggcatagcacgtttagcactttactatgctcgtagcctctgtg |
29672386 |
T |
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