View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17152_low_3 (Length: 781)
Name: NF17152_low_3
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17152_low_3 |
 | |
|
| [»] scaffold0425 (2 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 693; Significance: 0; HSPs: 54)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 693; E-Value: 0
Query Start/End: Original strand, 2 - 766
Target Start/End: Complemental strand, 6556013 - 6555249
Alignment:
| Q |
2 |
ttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttacacatatccatt |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6556013 |
ttttgtaaagatggaagatgttgaggcaatactcttttcaatttaggacaattttctatataaagctctttaagcagaggaaaccttacacatatccatt |
6555914 |
T |
|
| Q |
102 |
cctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttat |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6555913 |
cctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaactcttcatcaatgatctttat |
6555814 |
T |
|
| Q |
202 |
tccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatact |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6555813 |
tccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaagttcaagagatact |
6555714 |
T |
|
| Q |
302 |
aagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcct |
401 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555713 |
aagttgggtaaatgacaaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcct |
6555614 |
T |
|
| Q |
402 |
ccaaaactaacaggttactttcagccatttcttctcgtccgccattgaactcagtatgtaattcttctatatctttcaaatttaatgtggcagcatctgc |
501 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555613 |
ccaaaaccaacaggttactttcagccatttcttctcgtccgccattgaactcagtatgtaattcttctatatctttcaaatttaatgtggcagcatctgc |
6555514 |
T |
|
| Q |
502 |
agtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccaca |
601 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555513 |
agtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccaca |
6555414 |
T |
|
| Q |
602 |
ataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattgatgagtttgg |
701 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6555413 |
ataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggagctcaagatgacgtaaattgatgagtttgg |
6555314 |
T |
|
| Q |
702 |
aaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||| | | |||||||||||||||||||||||| |
|
|
| T |
6555313 |
aaaaatttgaagggagctcagtcaattgataacagtcttttaacaagagtgtttgcaaattatac |
6555249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 1 - 766
Target Start/End: Complemental strand, 6528448 - 6527683
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttacacatatccat |
100 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| ||||||||||| | ||||| |||||| ||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
6528448 |
tttttgtaaagaaggaagctgttgaggcaaggtgcttttcaatttaggacaatttcttatagaaagctctttaagcaaaggaaaccttagacatatccat |
6528349 |
T |
|
| Q |
101 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatcttta |
200 |
Q |
| |
|
| ||||||||| ||||||| ||||||| || || ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
6528348 |
ttctcccagttcaccatattctcaaatatcgaaaattgaagggacttgaatggaacaattgttgaattattgtcataaaaatcttcatcaatgatcttta |
6528249 |
T |
|
| Q |
201 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatac |
300 |
Q |
| |
|
|||||||||| ||||||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||| |||||| || | || ||||||||| |
|
|
| T |
6528248 |
ttccttcacaatcataaacggaaagtttcttaagagaagggagttgtccaaggggtggcaaacaggaacataacccacaaccattcagttgaagagatac |
6528149 |
T |
|
| Q |
301 |
taagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
6528148 |
taagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtgatgttgagcttcttcaagttgctatttggttgtatagcc |
6528049 |
T |
|
| Q |
401 |
tccaaaactaacaggttactttcagccatttcttctcgtccgccattgaactcagtatgtaattcttctatatctttcaaatttaatgtggcagcatctg |
500 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6528048 |
tccaagactaacaggttgctttcagccatttcttctcttccgccattgaactcagtatgcaattcttctatatctttcaaatttaatggggcagcatctg |
6527949 |
T |
|
| Q |
501 |
cagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccac |
600 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6527948 |
cagtatcactgacattacccaagcctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccac |
6527849 |
T |
|
| Q |
601 |
aataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattgatgagtttg |
700 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6527848 |
aataaaatatgacaaggtctgaagattatttagctttcccatattctttgggattttatttatacaagggagctcaagatgacgtaaattgatgagtttg |
6527749 |
T |
|
| Q |
701 |
gaaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| || ||||||||| ||||||||||||||| |
|
|
| T |
6527748 |
gaaaaatttgaagggagctcagtcaattcaccacaacctcccaacaagagagtttgcaaattatac |
6527683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 1 - 766
Target Start/End: Complemental strand, 6521702 - 6520943
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttacacatatccat |
100 |
Q |
| |
|
|||||||||||| | ||| |||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521702 |
tttttgtaaagaagaaaggtgttgaggcagggtgcttttcaatttaggacaattttttatataaagctctttaagcagaggaaaccttacacatatccat |
6521603 |
T |
|
| Q |
101 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatcttta |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521602 |
tcctcccagttgaccatatcctgaaatctcaaatattgaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatcttta |
6521503 |
T |
|
| Q |
201 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatac |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | || ||||||||| |
|
|
| T |
6521502 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacatc---tacaatccttcagttgaagagatac |
6521406 |
T |
|
| Q |
301 |
taagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcc |
400 |
Q |
| |
|
||||||||||||||||| | | | ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| || || |||| |
|
|
| T |
6521405 |
taagttgggtaaatgacaatcac---gccaatttggaaatctactacctttgtagcgtgtgatgttgagcttcttcaagttgctatttgattgtatagcc |
6521309 |
T |
|
| Q |
401 |
tccaaaactaacaggttactttcagccatttcttctcgtccgccattgaactcagtatgtaattcttctatatctttcaaatttaatgtggcagcatctg |
500 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521308 |
tccaagactaacaggttgctttcagccatttcttctcttccgccattgaactctgtatgtaattcttctatatctttcaaatttaatgtggcagcatctg |
6521209 |
T |
|
| Q |
501 |
cagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccac |
600 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521208 |
cagtatcactaacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccac |
6521109 |
T |
|
| Q |
601 |
aataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattgatgagtttg |
700 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6521108 |
aataaaatatgacagggtctgaagattacttagctttcccatattctttggcattttctttatacaagggagctcaagatgacgtaaattgatgagtttg |
6521009 |
T |
|
| Q |
701 |
gaaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
|||||||||||||| ||||||||||||| || || | | | |||||||||||||| ||||||||| |
|
|
| T |
6521008 |
gaaaaatttgaagggagctcagtcaattgatggcagccttttaacaagagtgtttgtaaattatac |
6520943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 1 - 766
Target Start/End: Original strand, 6734416 - 6735208
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttacacatatccat |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||| | ||||| ||| | ||||| ||||| |||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
6734416 |
tttttgtaaagaaggaagatgttgaggcagggtgcctttcagtttaggacaatttgttatagaaagctctataagcaaaggaaaccttacacatatccat |
6734515 |
T |
|
| Q |
101 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatcttta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6734516 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaactcttcatcaatgatcttta |
6734615 |
T |
|
| Q |
201 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatac |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || | |||||||||||| |
|
|
| T |
6734616 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtattggcaaacaggaacat---ctacaaccattcagttcaagagatac |
6734712 |
T |
|
| Q |
301 |
taagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcc |
400 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6734713 |
taagttgcgtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtgatgttgagcttcttcaagttgctatttggttttagagcc |
6734812 |
T |
|
| Q |
401 |
tccaaaactaacaggttactttcagccatttcttctcgtccgccattgaactcagtatgtaattcttcta---------tatctttcaaatttaatgtgg |
491 |
Q |
| |
|
||||| ||||||| | |||||| |||||||||||| ||||||||||||||| | ||||||||||||| |||||||||||||| |||||| |
|
|
| T |
6734813 |
tccaagactaacacacttctttcatccatttcttctcttccgccattgaactccatttgtaattcttctaaatacttcttatctttcaaatttgatgtgg |
6734912 |
T |
|
| Q |
492 |
cagcatctgcagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatg |
591 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6734913 |
cagcatctgcaggatcactgacattacccagccctttaatatgaattgttccatgaagctggttgagttttgccaaatctttgagatcagattcattatg |
6735012 |
T |
|
| Q |
592 |
ggcttccacaataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttat---------------------acaaggg |
670 |
Q |
| |
|
||||||||||||||||||||| | | | |||||||| |||||||||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
6735013 |
ggcttccacaataaaatatgataggctttgaagattgtttagctttcccatatgctttggcatcttctttatacgagggtctccaaaattatcacaaggg |
6735112 |
T |
|
| Q |
671 |
atctcaagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| | ||||| | | |||||||||||||| ||||||||| |
|
|
| T |
6735113 |
agttcaagatgacataaattgacgagtttggaaaaatttgaagggagctcagtcaattgacgacaaccttttaacaagagtgtttgtaaattatac |
6735208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 1 - 764
Target Start/End: Original strand, 8453098 - 8453903
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttaca---catatc |
97 |
Q |
| |
|
|||||||||||| ||||| |||||||||| |||||||||||| ||| || |||||||||||||||||||||| |||||||| | || || | | |
|
|
| T |
8453098 |
tttttgtaaagaaggaaggtgttgaggcagggacattttcaatttgggacattctcttatataaagctctttaagcaaaggaaacccttcaagacacaac |
8453197 |
T |
|
| Q |
98 |
cattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatct |
197 |
Q |
| |
|
||||||||||| ||| ||| | ||||||| ||||| |||||| ||| |||| | ||| || ||||| || || | ||||| |||||| | ||||||| |
|
|
| T |
8453198 |
cattcctcccaattgttcatcttctcaaatttcaaaacttcaagagacctgaacagcacatttattgaactactgtcgtaaaactcttcacctatgatct |
8453297 |
T |
|
| Q |
198 |
ttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaaccct-taaattcaagag |
296 |
Q |
| |
|
||||||| |||||||| |||| ||||| |||||||| | |||||| ||||||| |||||| | |||||||| |||| || || ||| ||||| |
|
|
| T |
8453298 |
ttattccatcacagtctgaaatagaaagcatcttgagaaaggggagtgtcccaagtggtggcaacaaagaacataatccacaaaactgtagatt-aagag |
8453396 |
T |
|
| Q |
297 |
atactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttag |
396 |
Q |
| |
|
|||||||||| ||||||||| |||||||| |||||||||||| ||| |||||||||| | || ||| | ||| |||||||||| |||||||||| || |
|
|
| T |
8453397 |
atactaagtttggtaaatgataaccccttatccaatttggaaagctattacctttgtattttgagatggtaagcctcttcaagtttctatttggttggag |
8453496 |
T |
|
| Q |
397 |
agcctccaaaactaacaggttactttcagccatt------------tcttctcgtccgccattgaactcagtatgtaattcttcta---------tatct |
475 |
Q |
| |
|
||||||||| ||| ||| || |||||||||||| ||||||| |||||||| |||| ||||||||||||||| ||||| |
|
|
| T |
8453497 |
agcctccaagactgacacattgctttcagccattgactcatccatttcttctcttccgccatcaaacttcatatgtaattcttctaaatatttcgtatct |
8453596 |
T |
|
| Q |
476 |
ttcaaatttaatgtggcagcatctgcagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttga |
575 |
Q |
| |
|
|||||||||| || |||| ||||||| ||| || |||||||||||||||| ||||| ||||| ||||||||||||||| ||||||||||| ||||| | |
|
|
| T |
8453597 |
ttcaaatttacagtagcagaatctgcaagatcgctaacattacccaacccttcaatatcaattgctccatgaagatggtttagttttgccaactctttaa |
8453696 |
T |
|
| Q |
576 |
gatcagattcattatgggcttccacaataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaaggg----- |
670 |
Q |
| |
|
|||||||| |||| || ||||||||||||||||||||||| | |||||||| |||||||||||| ||| ||||||||| |||| ||||||||| |
|
|
| T |
8453697 |
gatcagatacattctgctcttccacaataaaatatgacaagctttgaagattgtttagctttcccgtatgctttggcatcgtcttaatacaagggcgtcc |
8453796 |
T |
|
| Q |
671 |
-------------atctcaagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgc |
757 |
Q |
| |
|
| | ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||| | | || ||||||||||||| |
|
|
| T |
8453797 |
attatgacttggaagtttaagatgacgtaaattgacgagtttggaaaaatttgaagggagctctgtcaattcacaacagccttccagcaagagtgtttgc |
8453896 |
T |
|
| Q |
758 |
aaattat |
764 |
Q |
| |
|
||||||| |
|
|
| T |
8453897 |
aaattat |
8453903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 491 - 766
Target Start/End: Original strand, 6946248 - 6946523
Alignment:
| Q |
491 |
gcagcatctgcagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattat |
590 |
Q |
| |
|
||||||||||||| |||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| || || |||||||| ||||| | |
|
|
| T |
6946248 |
gcagcatctgcaggatcaatcacattacccaaccctttaatatcaattgttccatgaagatggtttagtttccccaactccttaagatcagactcattct |
6946347 |
T |
|
| Q |
591 |
gggcttccacaataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaatt |
690 |
Q |
| |
|
| |||||||||||||||| | |||| ||||||||| ||||| ||||| |||| ||||||||| |||||||||| ||| | ||||||||||||||||| |
|
|
| T |
6946348 |
gctcttccacaataaaataaggtaaggcctgaagattgtttagatttcctatatgctttggcatcttctttatactaggaagttcaagatgacgtaaatt |
6946447 |
T |
|
| Q |
691 |
gatgagtttggaaaaatttgaaggcagctcagtcaa-ttcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
|| |||||| || ||||||||||| ||||| ||||| ||| | ||| | | ||| ||||||||||||||||||||| |
|
|
| T |
6946448 |
gacgagttttgagaaatttgaagggagctctgtcaacttcct-acagccttgcaataagagtgtttgcaaattatac |
6946523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 535 - 766
Target Start/End: Complemental strand, 6480994 - 6480766
Alignment:
| Q |
535 |
aattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccacaataaaatatgacaaggtctgaagattatttagc |
634 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||| ||||||||||||||| |||| | ||||||||| |||||| | || || |||||| | |||||| |
|
|
| T |
6480994 |
aatttttccatgaagatggtttagtttttccaactctttgagatcagatccatttttctcttccacaacaaaataaggcagtgtttgaagactgtttagc |
6480895 |
T |
|
| Q |
635 |
tttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaattcataac |
734 |
Q |
| |
|
||||| |||| ||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
6480894 |
tttcctatatgctttggcatcttctttaaataagggagttcaagatgacgtaaattgatgagtttggaaaaatttgaagggagctcagtcaattc---ac |
6480798 |
T |
|
| Q |
735 |
aacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
| | | |||||||| |||||||||||||||| |
|
|
| T |
6480797 |
acccttgcaacaagattgtttgcaaattatac |
6480766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 6781247 - 6781093
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttacacatatccat |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||| | ||||| ||| | ||||| ||||| |||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
6781247 |
tttttgtaaagaaggaagatgttgaggcagggtgcctttcagtttaggacaatttgttatagaaagctctataagcaaaggaaaccttacacatatccat |
6781148 |
T |
|
| Q |
101 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaa |
155 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6781147 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaa |
6781093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 6945731 - 6946138
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaata---ctcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttaca---cat |
94 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | | ||||||||||||| ||||| |||||| |||||||||||||| |||||||||| || || |
|
|
| T |
6945731 |
tttttgtaaagaaggaaggtgttgaggcagcaaggcccttttcaatttgggacaatttcttatagtaagctctttaagcaaaggaaacctttcaggacaa |
6945830 |
T |
|
| Q |
95 |
atccattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatga |
194 |
Q |
| |
|
| |||||||||||| |||||||||| ||| ||| ||||| |||||||||| |||| |||||| |||||| | ||||| ||||| ||||| | |||| |
|
|
| T |
6945831 |
aaccattcctcccaattgaccatatgctccaatttcaaaacttcaagggacctgaacggaacatttgttgtactattgttgtaaaactcttcgccgatga |
6945930 |
T |
|
| Q |
195 |
tctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaag |
294 |
Q |
| |
|
|||||||||| | ||||| |||| |||| | ||||||||| |||| || ||||| |||| ||| |||||||| ||| |||| | || ||| |
|
|
| T |
6945931 |
tctttattccgttacagtttgaaatagaaatctccttgagagaggggaactgcccaagcattggtaaatgggaacatagtacacagtccttcagtttaag |
6946030 |
T |
|
| Q |
295 |
agatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggtttt |
394 |
Q |
| |
|
|||||||||||| | ||||||| ||| ||||||||||||||||| ||||| || ||||||| ||| ||| ||||||||||||||||||| ||||||| |
|
|
| T |
6946031 |
agatactaagtttgataaatgaaaaccacttagccaatttggaaagctactgccattgtagtatgtgatggtgagcttcttcaagttgctctttggttga |
6946130 |
T |
|
| Q |
395 |
agagcctc |
402 |
Q |
| |
|
|||||||| |
|
|
| T |
6946131 |
agagcctc |
6946138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 8470023 - 8470427
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttaca---catatc |
97 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| | ||| |||||| || ||| ||||| ||||||||||||||| |||||||| | || || | | |
|
|
| T |
8470023 |
tttttgtaaagaaggaaggtgttgaggcaatgcgcttctcaattcgggacagctttttatagaaagctctttaagcaaaggaaacccttcaagacacaac |
8470122 |
T |
|
| Q |
98 |
cattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatct |
197 |
Q |
| |
|
||||||||||| || ||| | | ||||| ||||| |||||||||| ||| |||||| |||||||||| ||||||| ||| |||||| |||| |||| |
|
|
| T |
8470123 |
cattcctcccaactgttcatcttcacaaatttcaaaacttcaagggacaagaacggaacatttgttgaattgttgccatgaaactcttcaccaattatct |
8470222 |
T |
|
| Q |
198 |
ttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagaga |
297 |
Q |
| |
|
||||||| | ||||||| | || | ||| | ||||||| | ||||| |||||||||| ||||||| | |||| | ||| | || |||| |||||| |
|
|
| T |
8470223 |
ttattccatgacagtcacagatagcaagctccttgagacacgggagctgtccaagtggtggcaaatggagacatgatccacagctctgtaatttaagaga |
8470322 |
T |
|
| Q |
298 |
tactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttaga |
397 |
Q |
| |
|
||||||||| |||||||||| |||||||| ||| |||||||| || |||||||||| |||| |||| ||| | ||||||||| ||||||||| ||| |
|
|
| T |
8470323 |
tactaagtttggtaaatgacaaccccttatccactttggaaagcttttacctttgtattgtgagatgtaaagcctattcaagttgttatttggttgaaga |
8470422 |
T |
|
| Q |
398 |
gcctc |
402 |
Q |
| |
|
||||| |
|
|
| T |
8470423 |
gcctc |
8470427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 6840177 - 6840067
Alignment:
| Q |
292 |
aagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggt |
391 |
Q |
| |
|
||||||||||||||||| |||||||| | ||||||||||| ||||||| ||| |||||||||||||| | ||||||||||||| |||||||||||||||| |
|
|
| T |
6840177 |
aagagatactaagttggataaatgacaagcccttagccaacttggaaagctattacctttgtagtgttttatgttgagcttctccaagttgctatttggt |
6840078 |
T |
|
| Q |
392 |
tttagagcctc |
402 |
Q |
| |
|
| |||||||| |
|
|
| T |
6840077 |
tgaagagcctc |
6840067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 136 - 405
Target Start/End: Complemental strand, 6481414 - 6481145
Alignment:
| Q |
136 |
ttcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttgaga |
235 |
Q |
| |
|
|||||| ||| |||||| | ||||| |||||||||| ||||| || |||||| | ||||||||||||| || ||||| |||| ||||| | | ||||| |
|
|
| T |
6481414 |
ttcaagagacctgaatgcatcaatttttgaattatttccatataactcttcaccgatgatctttattcttttacagtttgaaatagaaagctccctgaga |
6481315 |
T |
|
| Q |
236 |
gaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatactaagttgggtaaatgactaccccttagccaatttg |
335 |
Q |
| |
|
|| |||||||| ||||||| ||||||| |||||||| ||| | || |||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
6481314 |
gaggggagttgcccaagtggtggcaaatgagaacataatccacagtgacgcatttgaagagatactaagttgggtaaatgacaaccccttatccaatttg |
6481215 |
T |
|
| Q |
336 |
gaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcctccaa |
405 |
Q |
| |
|
|||||||| ||||| | || |||| ||| | ||| |||| ||| | |||||||||| ||||||||||| |
|
|
| T |
6481214 |
gaaatctattacctctatattgtgagatgctaagcctctttaagcttctatttggttgaagagcctccaa |
6481145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 471 - 720
Target Start/End: Original strand, 8588694 - 8588943
Alignment:
| Q |
471 |
tatctttcaaatttaatgtggcagcatctgcagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatc |
570 |
Q |
| |
|
||||||||||||| ||| |||||||||||| |||| | ||||||||||| ||||| ||||||||| | |||||||||||||| | || | || || |
|
|
| T |
8588694 |
tatctttcaaattggctgtcacagcatctgcaggatcaattacattacccaaaccttttatatgaattttcccatgaagatggtttaaattctctaactc |
8588793 |
T |
|
| Q |
571 |
tttgagatcagattcattatgggcttccacaataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaaggg |
670 |
Q |
| |
|
|| ||||||| | | ||||| ||||| |||||||| | |||| ||||||||| | ||||||||| | || |||||||||||| || | ||||| |
|
|
| T |
8588794 |
cttaagatcagctccgttatgcttttccattataaaataaggaaaggactgaagattctctagctttcctacatgctttggcatttttgtttcataaggg |
8588893 |
T |
|
| Q |
671 |
atctcaagatgacgtaaattgatgagtttggaaaaatttgaaggcagctc |
720 |
Q |
| |
|
| | |||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8588894 |
agtttaagatggcgtaaattgatgagtttggaaaaatttgaagggagctc |
8588943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 510 - 714
Target Start/End: Complemental strand, 6729759 - 6729555
Alignment:
| Q |
510 |
tgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccacaataaaata |
609 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||| ||||||||||| ||||| |||| || || |||||| || | || || |||||||| |||||| |
|
|
| T |
6729759 |
tgacattacccaacccttctatataaatttttccttgaagatggtttagtttctccaactccttaagatcatatcctttctgcttttccacaaaaaaata |
6729660 |
T |
|
| Q |
610 |
tgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattgatgagtttggaaaaattt |
709 |
Q |
| |
|
| ||||| ||||||| | ||||||||| || | |||||| || ||| ||| | |||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6729659 |
aggcaaggctcgaagattctctagctttcctatgtgctttggaatcttcgttacataagggagttcaagatgacgtagattgatgagtttggaaaaattt |
6729560 |
T |
|
| Q |
710 |
gaagg |
714 |
Q |
| |
|
||||| |
|
|
| T |
6729559 |
gaagg |
6729555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 6796125 - 6795906
Alignment:
| Q |
57 |
ttatataaagctctttaagcagaggaaaccttaca---catatccattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatgg |
153 |
Q |
| |
|
||||||||||||||||||||| |||||||| | || || | |||||||||||| ||| |||| ||||||||| ||||| ||||||||| |||| | |
|
|
| T |
6796125 |
ttatataaagctctttaagcaaaggaaacccttcaagacaaaaccattcctcccaattgtccatctcctcaaatttcaaaacctcaagggacctgaacga |
6796026 |
T |
|
| Q |
154 |
aacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcat-aaatggaaagtttcttgagagaagggagttgtccaag |
252 |
Q |
| |
|
|||| |||||||| ||||| ||||| |||||| |||||||| ||||||| ||||| || | |||||||||| | ||||||||| ||||| || || || |
|
|
| T |
6796025 |
aacatttgttgaactattgttgtaaaattcttcaccaatgatcattattccgtcaca-tcttgaaatggaaaggtccttgagagaggggagctgccctag |
6795927 |
T |
|
| Q |
253 |
tgttggcaaacaggaacataa |
273 |
Q |
| |
|
|| ||||||| ||||||||| |
|
|
| T |
6795926 |
tgctggcaaatcggaacataa |
6795906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 292 - 405
Target Start/End: Complemental strand, 8570227 - 8570114
Alignment:
| Q |
292 |
aagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggt |
391 |
Q |
| |
|
|||||||||||||||||||||| || |||| ||| |||||||||||| ||||| || ||||||| ||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
8570227 |
aagagatactaagttgggtaaaagaaaacccattaaccaatttggaaagctactgccattgtagtatgtgatggtgagcctcttcaagttgctatttggt |
8570128 |
T |
|
| Q |
392 |
tttagagcctccaa |
405 |
Q |
| |
|
| ||||| ||||| |
|
|
| T |
8570127 |
tgaagagcatccaa |
8570114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 289 - 405
Target Start/End: Complemental strand, 6730001 - 6729885
Alignment:
| Q |
289 |
ttcaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctattt |
388 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| ||| || | || ||||||||| |||||| |
|
|
| T |
6730001 |
ttcaagagatactaagttgggtaaatgacaacccctcagccaatttggaaagctattacctttgtatcgtgagattgtaagtcacttcaagtttctattt |
6729902 |
T |
|
| Q |
389 |
ggttttagagcctccaa |
405 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
6729901 |
ggttgtagagcctccaa |
6729885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 6734293 - 6734355
Alignment:
| Q |
13 |
tggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaag |
75 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6734293 |
tggaagaagttgaggcaatactcttttgaatttggaacaatgacttatataaagctctttaag |
6734355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 6781370 - 6781308
Alignment:
| Q |
13 |
tggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaag |
75 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6781370 |
tggaagaagttgaggcaatactcttttgaatttggaacaatgacttatataaagctctttaag |
6781308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 6450073 - 6450008
Alignment:
| Q |
289 |
ttcaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgta |
354 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||| |
|
|
| T |
6450073 |
ttcaagagatactaagttgggtaaatgacaacccctcagccaatttggaaagctattacctttgta |
6450008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8588275 - 8588490
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaacctt---acacatatc |
97 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| | |||||||||| | ||| ||||||||| | |||| |||||||| |||||||| | | |||||| |
|
|
| T |
8588275 |
tttttgtaaagaaggaaggtgttgaggcaaagcccttttcaattcaggacattcacttataaatagctttttaagcaaaggaaacccttgaaggcatatc |
8588374 |
T |
|
| Q |
98 |
cattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatct |
197 |
Q |
| |
|
||||||||||| ||| |||| | |||| |||| |||||| ||| ||||||||||||||||||| ||||| || ||||| || || ||||||||| |
|
|
| T |
8588375 |
cattcctcccaattgtccatccgtttaaattccaaaacttcaagagacctgaatggaacaattgttgagttatttccgtaaaagtcggcaccaatgatct |
8588474 |
T |
|
| Q |
198 |
ttattccttcacagtc |
213 |
Q |
| |
|
||||| ||| |||||| |
|
|
| T |
8588475 |
ttatttctttacagtc |
8588490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 402
Target Start/End: Original strand, 7586472 - 7586738
Alignment:
| Q |
136 |
ttcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttgaga |
235 |
Q |
| |
|
||||||||| ||||||||||| |||| ||||||||||||||||| |||| | |||||| ||||| |||||| | |||| |||| | |||||| |
|
|
| T |
7586472 |
ttcaagggatctgaatggaacatttgtggaattattgccataaaattctttccctatgatccttattttatcacagcctgaaattgaaatctctttgaga |
7586571 |
T |
|
| Q |
236 |
gaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatactaagttgggtaaatgactaccccttagccaatttg |
335 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||| ||| || | | || || |||||||||||||||| || |||||| | |||||||| |
|
|
| T |
7586572 |
caagggagttgtccaagtggtggcaactcggaacataaagcacagagatttagtctaattgaaactaagttgggtaaatcacaacccctcatccaatttg |
7586671 |
T |
|
| Q |
336 |
gaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcctc |
402 |
Q |
| |
|
||| ||| ||||||||||||||| ||| | ||| |||||||| |||||||||||| |||||||| |
|
|
| T |
7586672 |
caaacctattacctttgtagtgtgagatgataagcctcttcaagctgctatttggttgaagagcctc |
7586738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 510 - 711
Target Start/End: Complemental strand, 6449831 - 6449630
Alignment:
| Q |
510 |
tgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatgggcttccacaataaaata |
609 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||| ||||||||||| ||||| ||| || || |||||| || | || || |||||||| |||||| |
|
|
| T |
6449831 |
tgacattacccaacccttctatataaatttttccttgaagatggtttagtttcttcaactccttaagatcatatcctttctgcttttccacaaaaaaata |
6449732 |
T |
|
| Q |
610 |
tgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattgatgagtttggaaaaattt |
709 |
Q |
| |
|
| ||||| ||||||| | ||||||||| || | | |||| || ||| ||| | |||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6449731 |
aggcaaggctcgaagattctctagctttcctatgtgcgttggaatcttcgttacataagggagttcaagatgacgtagattgatgagtttggaaaaattt |
6449632 |
T |
|
| Q |
710 |
ga |
711 |
Q |
| |
|
|| |
|
|
| T |
6449631 |
ga |
6449630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 136 - 356
Target Start/End: Complemental strand, 13271978 - 13271758
Alignment:
| Q |
136 |
ttcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttgaga |
235 |
Q |
| |
|
||||||||| | ||||||||| ||| || ||||| ||| |||| ||| | ||||||||| |||||| | |||| || |||||||||| |||| |||| |
|
|
| T |
13271978 |
ttcaagggatctaaatggaacatttgatggattatagccgcaaaactctgaaccaatgatctctattccatgacagccagaaatggaaagcttctcgaga |
13271879 |
T |
|
| Q |
236 |
gaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatactaagttgggtaaatgactaccccttagccaatttg |
335 |
Q |
| |
|
||||| | || ||||||| |||||| |||||| | ||||| ||| ||||||||||||||||| ||||||| |||| | ||| |||||||||| |
|
|
| T |
13271878 |
gaaggcaactgcccaagtggtggcaactgggaacagagtttacatcccaacaattcaagagatactaaattgggtagatgatgatccccaagccaatttg |
13271779 |
T |
|
| Q |
336 |
gaaatctactacctttgtagt |
356 |
Q |
| |
|
|||| ||||||||| |||||| |
|
|
| T |
13271778 |
gaaagctactacctctgtagt |
13271758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 6486270 - 6486191
Alignment:
| Q |
323 |
cttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcctc |
402 |
Q |
| |
|
||||||||| ||||||| | | ||||||||||| || | |||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
6486270 |
cttagccaacttggaaaacgattacctttgtagcgtttgatgttgagcttcttcaagttgctatttgattgaagagcctc |
6486191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 6932336 - 6932419
Alignment:
| Q |
319 |
accccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcctc |
402 |
Q |
| |
|
|||| |||||||| ||||||| | | ||||||||||| || | |||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
6932336 |
accctttagccaacttggaaaacgattacctttgtagcgtttgatgttgagcttcttcaagttgctatttgattgaagagcctc |
6932419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 676 - 727
Target Start/End: Original strand, 7749170 - 7749221
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaat |
727 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
7749170 |
aagatgacgtaaattgatgagtttgcaaaaatctgaaggcagctcagccaat |
7749221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 356
Target Start/End: Original strand, 6236411 - 6236549
Alignment:
| Q |
218 |
atggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatactaagttgggtaaatgac |
317 |
Q |
| |
|
|||||||| |||||||||||||||| || ||||||| |||||| |||||| | ||||| ||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
6236411 |
atggaaagcttcttgagagaagggaactgcccaagtggtggcaactgggaacaatatttacatcccaacaattcaagagatactaaattgggtagatgat |
6236510 |
T |
|
| Q |
318 |
taccccttagccaatttggaaatctactacctttgtagt |
356 |
Q |
| |
|
| ||| |||||||| ||||| ||||||||| |||||| |
|
|
| T |
6236511 |
gatccccaagccaattaggaaagctactacctctgtagt |
6236549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 6592916 - 6592600
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagagg-aaacctt--acacatatc |
97 |
Q |
| |
|
|||||| ||||| ||||| |||||||||| |||||||||| |||| ||||| ||||| ||||||||| ||||| ||| ||||||| | ||||| | |
|
|
| T |
6592916 |
tttttgcaaagaaggaaggtgttgaggcagggctcttttcaacttgggacaatgttttatacaaagctcttgaagcaaagggaaaccttcaagacataac |
6592817 |
T |
|
| Q |
98 |
cattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatct |
197 |
Q |
| |
|
||||||| ||| | ||| | |||||||| ||| ||||||| | | ||||||||| ||| |||||||| ||| ||||| ||| | ||||||||| |
|
|
| T |
6592816 |
cattccttccattcagacatgttctcaaatcgcaatgtttcaaggaatctaaatggaacatttgatgaattatagccgtaaaattctgtaccaatgatct |
6592717 |
T |
|
| Q |
198 |
ttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagaga |
297 |
Q |
| |
|
|||||| |||||| | ||| |||||| ||||||||||| |||| || ||||||| |||||| |||| || ||||| ||| |||||||| || |
|
|
| T |
6592716 |
ctattccatcacagcctgaaaaggaaagcttcttgagagaggggaactgcccaagtggtggcaattcggaatggaatttacatcccaacaattcaaggga |
6592617 |
T |
|
| Q |
298 |
tactaagttgggtaaat |
314 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
6592616 |
tactaacttgggtaaat |
6592600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 405
Target Start/End: Original strand, 6140943 - 6141159
Alignment:
| Q |
189 |
caatgatctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaa |
288 |
Q |
| |
|
||||||||| |||||| | |||| | |||||||||| |||||||||||||||| || ||||||| |||||| |||||| |||| ||| || |
|
|
| T |
6140943 |
caatgatctctattccatgacagcctgaaatggaaagcttcttgagagaagggaactgcccaagtggtggcaactgggaacagtgtgtacatcccaacaa |
6141042 |
T |
|
| Q |
289 |
ttcaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctattt |
388 |
Q |
| |
|
||||||||||||||| ||||||| |||| | ||| |||||||| ||||| ||||||||| |||||| | ||| ||||| || | | ||| |||||| |
|
|
| T |
6141043 |
ttcaagagatactaaattgggtagatgatgatccccaagccaattaggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctattt |
6141142 |
T |
|
| Q |
389 |
ggttttagagcctccaa |
405 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
6141143 |
ggttgaagagcctccaa |
6141159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 728
Target Start/End: Original strand, 6141454 - 6141506
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaatt |
728 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||| || ||||||||||||| |
|
|
| T |
6141454 |
aagatgacgtaaattgacgagtttgcaaaaatttgatgggagctcagtcaatt |
6141506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 728
Target Start/End: Original strand, 6168059 - 6168111
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaatt |
728 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
6168059 |
aagatgacgtaaattgatgagtttgccaaaatttgatgggagctcagtcaatt |
6168111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 356
Target Start/End: Original strand, 6257806 - 6258026
Alignment:
| Q |
136 |
ttcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttgaga |
235 |
Q |
| |
|
||||||||| | |||| |||| ||| |||||||| ||| |||| ||| | |||||||||||||||| | |||| | |||||||||| ||||||||| |
|
|
| T |
6257806 |
ttcaagggatctaaatgcaacatttgatgaattatagccgcaaaactctgaaccaatgatctttattccatgacagcctgaaatggaaagcttcttgaga |
6257905 |
T |
|
| Q |
236 |
gaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatactaagttgggtaaatgactaccccttagccaatttg |
335 |
Q |
| |
|
||||||| | ||||||| |||||| |||||| ||||| ||| ||||||||||||||||| || |||| || | | ||| |||||||||| |
|
|
| T |
6257906 |
gaagggaacttcccaagtggtggcaactgggaacaatgtttacatcccactaattcaagagatactaaatttggtagattaagatccccaagccaatttg |
6258005 |
T |
|
| Q |
336 |
gaaatctactacctttgtagt |
356 |
Q |
| |
|
|||| ||||||||| |||||| |
|
|
| T |
6258006 |
gaaagctactacctctgtagt |
6258026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 728
Target Start/End: Original strand, 6264853 - 6264905
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaatt |
728 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||| || ||||||||||||| |
|
|
| T |
6264853 |
aagatgacgtaaattgacgagtttgcaaaaatttgatgggagctcagtcaatt |
6264905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 676 - 727
Target Start/End: Original strand, 5279821 - 5279872
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaat |
727 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||| |||||||||||| |
|
|
| T |
5279821 |
aagatgacgtaaattgacaagtttgtaaaaatttgaagggagctcagtcaat |
5279872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 273
Target Start/End: Complemental strand, 6486441 - 6486290
Alignment:
| Q |
122 |
tcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatgg |
221 |
Q |
| |
|
|||||| ||||| |||||||||| | ||||||| |||||||||||||||| | ||||| |||||| |||||||||||| | ||| ||||| ||| |
|
|
| T |
6486441 |
tcaaatatcaaaacttcaagggacctaaatggaaaaattgttgaattattgtcgtaaaattcttcactgatgatctttatttcatcagagtcacaaacat |
6486342 |
T |
|
| Q |
222 |
aaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataa |
273 |
Q |
| |
|
|||||||| |||||| || ||||| | |||| |||||||| |||||||| |
|
|
| T |
6486341 |
gaagtttctagagagagggcagttgccaaagtcgtggcaaacgagaacataa |
6486290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 6850717 - 6850598
Alignment:
| Q |
123 |
caaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatgga |
222 |
Q |
| |
|
|||||| |||| ||||||||| || ||||||||| ||| |||||| | ||| ||||| ||| | ||||||||| |||||| |||||| | ||||||| |
|
|
| T |
6850717 |
caaatcgcaaagtttcaagggatttaaatggaacatttgatgaattgtagccgtaaaactctggaccaatgatctctattccatcacagcctgaaatgga |
6850618 |
T |
|
| Q |
223 |
aagtttcttgagagaaggga |
242 |
Q |
| |
|
||| ||||||||||| |||| |
|
|
| T |
6850617 |
aagattcttgagagagggga |
6850598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 4390442 - 4390321
Alignment:
| Q |
39 |
tcaatttggaacaatcacttatataaagctctttaagcagagg-aaacctt--acacatatccattcctcccagttgaccatatcctcaaatctcaaata |
135 |
Q |
| |
|
||||||| | ||||| || |||| ||||||||||||||| ||| ||||||| ||||||| |||||||| ||| ||| ||| |||||||||| |||| |
|
|
| T |
4390442 |
tcaattttggacaattacgtatagaaagctctttaagcaaagggaaaccttcaacacataaccattccttccaattggacatgtcctcaaatcgcaaaat |
4390343 |
T |
|
| Q |
136 |
ttcaagggacttgaatggaaca |
157 |
Q |
| |
|
||||||| || ||||||||||| |
|
|
| T |
4390342 |
ttcaaggaacctgaatggaaca |
4390321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 676 - 766
Target Start/End: Original strand, 6899256 - 6899346
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
||||||||||| ||||| ||||||| |||||| |||||| |||||||||| || | |||||| | || |||||||| |||||||||||| |
|
|
| T |
6899256 |
aagatgacgtagattgacgagtttgcaaaaatctgaagggagctcagtcagtttaaaacaaccttgcagtaagagtgtctgcaaattatac |
6899346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 6167646 - 6167715
Alignment:
| Q |
287 |
aattcaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagt |
356 |
Q |
| |
|
||||||||||||||||| ||||||| |||| | ||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
6167646 |
aattcaagagatactaaattgggtagatgatgatccccaagccaatttggaaagctactacctctgtagt |
6167715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 6898843 - 6898912
Alignment:
| Q |
287 |
aattcaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagt |
356 |
Q |
| |
|
||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||||| ||| |||||| |
|
|
| T |
6898843 |
aattctagagatactaaattgggtaaatgatgaaccccaagccaatttggaaatctactgcctctgtagt |
6898912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 728
Target Start/End: Original strand, 6237921 - 6237973
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaatt |
728 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||| || |||| |||||||| |
|
|
| T |
6237921 |
aagatgacgtaaattgataagtttgcaaaaatttgatgggagcttagtcaatt |
6237973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6521972 - 6521888
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | |||||||||| || ||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
6521972 |
tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaac |
6521888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6522377 - 6522293
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | |||||||||| || ||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
6522377 |
tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaac |
6522293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6522917 - 6522833
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | |||||||||| || ||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
6522917 |
tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaac |
6522833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6523052 - 6522968
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | |||||||||| || ||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
6523052 |
tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaac |
6522968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 243
Target Start/End: Complemental strand, 6840427 - 6840217
Alignment:
| Q |
36 |
ttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttaca---catatccattcctcccagttgaccatatcctcaaatctcaa |
132 |
Q |
| |
|
|||||||||||| ||| | |||||| ||| || |||||||| |||||||| | || || | ||||| |||||| ||| ||| | ||||||| |||| |
|
|
| T |
6840427 |
ttttcaatttgggacattttcttatagaaatctttttaagcaaaggaaacccttcaagacaaaaccatttctcccaattgttcatcttctcaaatttcaa |
6840328 |
T |
|
| Q |
133 |
atattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttg |
232 |
Q |
| |
|
| |||||| ||| | |||||||||||||| |||| ||| | ||||| |||| ||| |||||||||||| | ||||||||| ||| ||||| || || |
|
|
| T |
6840327 |
aacttcaagcgacctaaatggaacaattgtcgaatcgttgtcgtaaaactcttgatcgatgatctttatttcatcacagtcacaaacagaaagctttctg |
6840228 |
T |
|
| Q |
233 |
agagaagggag |
243 |
Q |
| |
|
||||| ||||| |
|
|
| T |
6840227 |
agagaggggag |
6840217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6840600 - 6840516
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
|||||||||||| ||||| ||||| |||| | ||||||||||||| |||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
6840600 |
tttttgtaaagaaggaaggtgttgtggcagagcccttttcaatttgggacaatcgaatatataaatctctttaagcaaaggaaac |
6840516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6841143 - 6841059
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | |||||||||| || ||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
6841143 |
tttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaac |
6841059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 735
Target Start/End: Complemental strand, 6839781 - 6839722
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaattcataaca |
735 |
Q |
| |
|
|||||| |||||| ||| |||||| ||||||||||||| || ||||||||||||||||| |
|
|
| T |
6839781 |
aagatggcgtaaactgactagtttgtaaaaatttgaagggagttcagtcaattcataaca |
6839722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 6841007 - 6840924
Alignment:
| Q |
2 |
ttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaac |
85 |
Q |
| |
|
||||||||||| ||||| |||||||||| | |||||||||| || ||||| |||||| ||| ||||||||||| ||||||| |
|
|
| T |
6841007 |
ttttgtaaagaaggaaggtgttgaggcagagcccttttcaattcgggacaatttcttatagaaatctctttaagcaaaggaaac |
6840924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 710
Target Start/End: Original strand, 6244461 - 6244495
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttg |
710 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6244461 |
aagatgacgtaaattgatgagtttgcaaaaatttg |
6244495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 710
Target Start/End: Complemental strand, 13271414 - 13271380
Alignment:
| Q |
676 |
aagatgacgtaaattgatgagtttggaaaaatttg |
710 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13271414 |
aagatgacgtaaattgatgagtttgcaaaaatttg |
13271380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 727
Target Start/End: Original strand, 5249328 - 5249381
Alignment:
| Q |
674 |
tcaagatgacgtaaattgatgagtttggaaaaatttgaaggcagctcagtcaat |
727 |
Q |
| |
|
||||||||| |||||||| | |||||| |||||| |||||| |||||||||||| |
|
|
| T |
5249328 |
tcaagatgatgtaaattgctaagtttgtaaaaatctgaagggagctcagtcaat |
5249381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 543; Significance: 0; HSPs: 2)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 1 - 766
Target Start/End: Complemental strand, 9062 - 8288
Alignment:
| Q |
1 |
tttttgtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaagcagaggaaaccttacacatatccat |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9062 |
tttttgtaaagaaggaagatgttgaggcagggtgcttttcaatttaggacaattttctatataaagctctttaagcagaggaaaccttacacatatccat |
8963 |
T |
|
| Q |
101 |
tcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaaatcttcatcaatgatcttta |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8962 |
tcctcccagttgaccatatccacaaatctcaaatattcaagggacttgaatggaacaattgttgaattattgccataaaattcttcatcaatgatcttta |
8863 |
T |
|
| Q |
201 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggcaaacaggaacataacttacaacccttaaattcaagagatac |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | || ||||||||| |
|
|
| T |
8862 |
ttccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgctggcaaacaggaacataacccacaacccttcagttgaagagatac |
8763 |
T |
|
| Q |
301 |
taagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggttttagagcc |
400 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
8762 |
taagttcggtaaatgactaccccttagccaatttggaaagctactacctttgtagcatgtgatgttgagcttcttcaagttgctatttggttgtaaagcc |
8663 |
T |
|
| Q |
401 |
tccaaaactaacaggttactttcagccatttcttctcgtccgccattgaactcagtatgtaattcttcta---------tatctttcaaatttaatgtgg |
491 |
Q |
| |
|
||||| ||||||| | |||||| |||||||||||| ||||||||||||||| | || |||||||||| |||||||||||||| |||||| |
|
|
| T |
8662 |
tccaagactaacacacttctttcatccatttcttctcttccgccattgaactccatttgaaattcttctaaatacttcttatctttcaaatttgatgtgg |
8563 |
T |
|
| Q |
492 |
cagcatctgcagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatg |
591 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8562 |
cagcatctgcaggatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatctttgagatcagattcattatg |
8463 |
T |
|
| Q |
592 |
ggcttccacaataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttctttatacaagggatctcaagatgacgtaaattg |
691 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8462 |
ggcttccacaataaaatatgacatggtctgaagattatttagctttcccatattctttggcattttctttatacaagggagctcaagatgacgtaaattg |
8363 |
T |
|
| Q |
692 |
atgagtttggaaaaatttgaaggcagctcagtcaattcataacaacatctcaacaagagtgtttgcaaattatac |
766 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | ||||| | | |||||||||||||| ||||||||| |
|
|
| T |
8362 |
atgagtttggaaaaatttgaagggagctcagtcaattgacgacaaccttttaacaagagtgtttgtaaattatac |
8288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 9192 - 9123
Alignment:
| Q |
6 |
gtaaagatggaagatgttgaggcaatactcttttcaatttggaacaatcacttatataaagctctttaag |
75 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| ||||| ||||||| | |||| ||||||||||||| |
|
|
| T |
9192 |
gtaaagaaggaagatgttgaggcaatacccttttgaatttagaacaataccatatagaaagctctttaag |
9123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 471 - 670
Target Start/End: Complemental strand, 2623847 - 2623648
Alignment:
| Q |
471 |
tatctttcaaatttaatgtggcagcatctgcagtatcactgacattacccaaccctttaatatgaattgttccatgaagatggttgagttttgccaaatc |
570 |
Q |
| |
|
||||||||||||||| ||| |||||||||||| ||| ||||||||| |||| |||| |||||||||||||||||||| |||||| |||||||||| || |
|
|
| T |
2623847 |
tatctttcaaatttactgtagcagcatctgcaagatcgctgacattatccaagccttcaatatgaattgttccatgaa-atggttttgttttgccaactc |
2623749 |
T |
|
| Q |
571 |
tttgagatcagattcattatgggcttccacaataaaatatgacaaggtctgaagattatttagctttcccatattctttggcattttc-tttatacaagg |
669 |
Q |
| |
|
||| ||||||||| ||||||| ||||| ||||||||||| ||| | | |||||||| |||||||||||||||| ||||| ||| ||| ||||||||||| |
|
|
| T |
2623748 |
tttaagatcagatccattatgctcttccccaataaaatataacatgctttgaagattgtttagctttcccatatgctttgacatcttcttttatacaagg |
2623649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 405
Target Start/End: Original strand, 699 - 1043
Alignment:
| Q |
64 |
aagctctttaagcagaggaaaccttaca---catatccattcctcccagttgaccatatcctcaaatctcaaatattcaagggacttgaatggaacaatt |
160 |
Q |
| |
|
|||||||||||||| |||||||| | || || | |||||||||||| ||| || | ||||||| ||||| |||||||||| ||| |||||| |
|
|
| T |
699 |
aagctctttaagcaaaggaaacccttcaggacacaaccattcctcccaattgttcaacttctcaaatttcaaaacttcaagggacaagaacggaacatgc |
798 |
T |
|
| Q |
161 |
gttgaattattgccataaaaatcttcatcaatgatctttattccttcacagtcataaatggaaagtttcttgagagaagggagttgtccaagtgttggca |
260 |
Q |
| |
|
||| |||| |||||| || |||||| |||||||||||||||| ||||| | |||| ||||| |||||||||||||| || || ||||||| ||| | |
|
|
| T |
799 |
gttaaattgctgccatgaatctcttcaccaatgatctttattccatcacaatatgaaatagaaagattcttgagagaaggaagctgcccaagtggtggaa |
898 |
T |
|
| Q |
261 |
aacaggaacataacttacaacccttaaattcaagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgt |
360 |
Q |
| |
|
|| ||||||||| ||| | | || |||||||||||||||||||||||||| ||| ||| |||||||||||| | || || |||||| | |
|
|
| T |
899 |
aatgggaacataatccacagcttaacagttgaagagatactaagttgggtaaatgacaacctgttatccaatttggaaagttgctgccattgtagccttc |
998 |
T |
|
| Q |
361 |
aatgttgagcttcttcaagttgctatttggttttagagcctccaa |
405 |
Q |
| |
|
||| ||||| ||||||||||| ||||||||| ||||| ||||| |
|
|
| T |
999 |
aatagtgagcctcttcaagttgttatttggttgaagagcatccaa |
1043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 6574598 - 6574499
Alignment:
| Q |
292 |
aagagatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagtgtgtaatgttgagcttcttcaagttgctatttggt |
391 |
Q |
| |
|
||||||||||||||| ||||||||| || |||||||||||||||||| || || || ||||||| | | ||| ||||| ||| | ||||||||||||| |
|
|
| T |
6574598 |
aagagatactaagttaggtaaatgagaacaccttagccaatttggaaagctgctgccattgtagtatttgatggtgagcctctgtaggttgctatttggt |
6574499 |
T |
|
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