View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17152_low_31 (Length: 431)

Name: NF17152_low_31
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17152_low_31
NF17152_low_31
[»] chr8 (2 HSPs)
chr8 (15-431)||(11063302-11063718)
chr8 (83-129)||(28431383-28431429)
[»] chr5 (4 HSPs)
chr5 (85-189)||(17890717-17890821)
chr5 (86-170)||(42910450-42910534)
chr5 (97-144)||(40516775-40516822)
chr5 (103-143)||(19192067-19192107)
[»] chr1 (3 HSPs)
chr1 (101-188)||(5276945-5277032)
chr1 (83-143)||(34634146-34634206)
chr1 (131-187)||(44167589-44167645)
[»] chr4 (2 HSPs)
chr4 (54-196)||(32028192-32028334)
chr4 (52-189)||(33290860-33290997)
[»] chr2 (2 HSPs)
chr2 (50-189)||(12702846-12702986)
chr2 (94-147)||(5296842-5296895)
[»] chr7 (6 HSPs)
chr7 (105-171)||(23822869-23822935)
chr7 (358-405)||(29764305-29764352)
chr7 (83-121)||(36522526-36522564)
chr7 (65-101)||(26526614-26526650)
chr7 (56-143)||(36729542-36729629)
chr7 (154-190)||(44426043-44426079)
[»] chr6 (6 HSPs)
chr6 (56-164)||(32695412-32695520)
chr6 (105-188)||(30808440-30808523)
chr6 (94-189)||(33944756-33944851)
chr6 (56-171)||(32234436-32234553)
chr6 (155-189)||(34197875-34197909)
chr6 (137-189)||(32234500-32234552)
[»] chr3 (5 HSPs)
chr3 (107-169)||(810771-810833)
chr3 (103-170)||(23944565-23944632)
chr3 (94-175)||(14222651-14222732)
chr3 (154-191)||(31215818-31215855)
chr3 (94-146)||(27664089-27664141)
[»] scaffold0020 (1 HSPs)
scaffold0020 (83-135)||(172515-172567)
[»] scaffold0045 (1 HSPs)
scaffold0045 (121-188)||(58600-58667)


Alignment Details
Target: chr8 (Bit Score: 364; Significance: 0; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 15 - 431
Target Start/End: Original strand, 11063302 - 11063718
Alignment:
Q  15 aaccattaggaaatagatttagttatgattataagttagcatatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaa 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11063302 aaccattaggaaatagatttacttatgattataagttagcatatgtttggtatcatggtgagtatataagaatcacgacgatccaccataattttttaaa 11063401  T
Q  115 agttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaacatgtacttagaattttgaatttgctaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  11063402 agttacactttatagtttctataaaatcatgatggattaccgtgattctgacctatccaccgtgatatgaaacatgtacttaggattttgaatttgctaa 11063501  T
Q  215 agagagtaaaataaagcatgatacatagattcaatgtatattcaactagagttagtaaacattaggaattggaattcaaacttttatgggtagcacatgt 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11063502 agagagtaaaataaagcatgatacatagattcaatgtatattcaactagagttagtaaacattaggaattggaattcaaacttttatgggtagcacatgt 11063601  T
Q  315 ttgctgaaaatgttacaccaaccctaaactactatcnnnnnnncatacctgtgacaataacattagtgaggtttgttccaaaaatgaggctggggtgcct 414  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  11063602 ttgctgaaaatgttacaccaaccctaaactactatctttttttcatacctgtgacaataacatcagtgaggtttgttccaaaaatgaggctggtgtgcct 11063701  T
Q  415 tccagctgctgcatctc 431  Q
    |||||||||||||||||    
T  11063702 tccagctgctgcatctc 11063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 28431383 - 28431429
Alignment:
Q  83 agaatcacgacgatccaccatgattttttaaaagttacactttatag 129  Q
    ||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  28431383 agaataacaacgatccaccatgatttttcaaaagctacactttatag 28431429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 17890821 - 17890717
Alignment:
Q  85 aatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatca 184  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||| | ||||||||   ||||| ||||||||||||||||| ||||  ||||| ||    
T  17890821 aatcatgacgatccatcgtgattttttaaaagttacactttatagtttatgtaaaatcacagtggatcaccgtgattctgacatacccacggtgatacca 17890722  T
Q  185 aacat 189  Q
    |||||    
T  17890721 aacat 17890717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 42910534 - 42910450
Alignment:
Q  86 atcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatat 170  Q
    |||||||||||||||| |||||||| ||||| | |||||| ||| ||||| |||||||  |||||| ||||||||| || |||||    
T  42910534 atcacgacgatccaccgtgatttttcaaaagctgcactttgtagcttctacaaaatcacaatggatcaccgtgattttggcatat 42910450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 40516775 - 40516822
Alignment:
Q  97 ccaccatgattttttaaaagttacactttatagtttctataaaatcat 144  Q
    |||||||||||||| ||||| |||||||| ||| ||||||||||||||    
T  40516775 ccaccatgatttttcaaaagctacactttgtagcttctataaaatcat 40516822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 19192067 - 19192107
Alignment:
Q  103 tgattttttaaaagttacactttatagtttctataaaatca 143  Q
    ||||||||||||||||| |||||||||||| | ||||||||    
T  19192067 tgattttttaaaagttatactttatagtttttgtaaaatca 19192107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 5277032 - 5276945
Alignment:
Q  101 catgattttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaaca 188  Q
    |||||||||| ||||  |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||| ||||||    
T  5277032 catgatttttcaaaaaatacactttgtagtttctacaaaatcatgatggatcaccgtgattctgacatatccactgtgataccaaaca 5276945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 34634146 - 34634206
Alignment:
Q  83 agaatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatca 143  Q
    |||||||| |||||||||| | |||||||||||  ||| | |||||||||||| |||||||    
T  34634146 agaatcacaacgatccaccgtaattttttaaaatctacgccttatagtttctacaaaatca 34634206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 44167589 - 44167645
Alignment:
Q  131 ttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaac 187  Q
    ||||| ||||| ||||||||| |||||||||||||||||  | | ||||||||||||    
T  44167589 ttctacaaaattatgatggatcaccgtgattctgacatactctctttgatatcaaac 44167645  T

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Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 32028192 - 32028334
Alignment:
Q  54 catatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggatta 153  Q
    |||||||||||||||| |||   ||| | |||||||||| ||||||| ||||||||| ||||| |||||||||||| || |  ||||||| | || || |    
T  32028192 catatgtttggtatcacggtagatatgtcagaatcacgatgatccactatgatttttcaaaagctacactttatagcttatgcaaaatcacggtgaatca 32028291  T
Q  154 ccgtgattctgacatatccaccttgatatcaaacatgtactta 196  Q
    | ||||||| ||||| |||||| ||||| |||||||| |||||    
T  32028292 ctgtgattcagacatctccaccgtgataccaaacatgcactta 32028334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 33290997 - 33290860
Alignment:
Q  52 agcatatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggat 151  Q
    |||||||||||| ||||| |||| || | | | ||||||||||||||||  ||| |||| ||||||| |||| | ||| || |  ||||||| | ||| |    
T  33290997 agcatatgtttgatatcacggtgggtgtgtcaaaatcacgacgatccactgtgaattttcaaaagtttcactctctagcttatgcaaaatcacggtgggt 33290898  T
Q  152 taccgtgattctgacatatccaccttgatatcaaacat 189  Q
    || |||||||||  || ||||||| |||||||||||||    
T  33290897 tatcgtgattctagcacatccaccgtgatatcaaacat 33290860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 12702846 - 12702986
Alignment:
Q  50 ttagcatatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaaagt-tacactttatagtttctataaaatcatgatg 148  Q
    |||||||||||||||  ||| ||||  ||||| | |||||||| || |||| |||||||| ||||||  |||||||| ||||||||  ||||||||||||    
T  12702846 ttagcatatgtttggcttcacggtggatatatcataatcacgatgacccacaatgattttgtaaaaggctacactttgtagtttctgcaaaatcatgatg 12702945  T
Q  149 gattaccgtgattctgacatatccaccttgatatcaaacat 189  Q
      | ||||||||||| | ||||||||| | ||| |||||||    
T  12702946 agtcaccgtgattcttagatatccaccataataccaaacat 12702986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 5296842 - 5296895
Alignment:
Q  94 gatccaccatgattttttaaaagttacactttatagtttctataaaatcatgat 147  Q
    ||||||||| ||||||||||||| |||||||||||||||||  |||||| ||||    
T  5296842 gatccaccacgattttttaaaagctacactttatagtttctgcaaaatcgtgat 5296895  T

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Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 23822869 - 23822935
Alignment:
Q  105 attttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatc 171  Q
    ||||||||||||||| ||||| |||||||||||||||||   ||||||| ||| |||||||||||||    
T  23822869 attttttaaaagttaaactttgtagtttctataaaatcacagtggattatcgtaattctgacatatc 23822935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 29764352 - 29764305
Alignment:
Q  358 catacctgtgacaataacattagtgaggtttgttccaaaaatgaggct 405  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  29764352 catacctgtgacaataacatccgtgaggtttgttccaaatatgaggct 29764305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 36522564 - 36522526
Alignment:
Q  83 agaatcacgacgatccaccatgattttttaaaagttaca 121  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36522564 agaatcacgacgatccatcatgattttttaaaagttaca 36522526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 26526614 - 26526650
Alignment:
Q  65 tatcatggtgagtatataagaatcacgacgatccacc 101  Q
    ||||||||||||||||| |||||||||||||||||||    
T  26526614 tatcatggtgagtatatcagaatcacgacgatccacc 26526650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 36729542 - 36729629
Alignment:
Q  56 tatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatca 143  Q
    ||||||||||||| |||||  | | ||||||||||||| || ||||||||||||  ||||| |||||||| ||| || | ||||||||    
T  36729542 tatgtttggtatcttggtggttgtgtaagaatcacgactatgcaccatgattttgcaaaagctacactttgtaggttttgtaaaatca 36729629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 44426043 - 44426079
Alignment:
Q  154 ccgtgattctgacatatccaccttgatatcaaacatg 190  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  44426043 ccgtgattctgacaaatccaccatgatatcaaacatg 44426079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 32695412 - 32695520
Alignment:
Q  56 tatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggattacc 155  Q
    |||||||||||||| ||| | ||| | |||||||| |  ||||| | |||||||||||||| |||||||||||  ||||| |||||||||  ||||||||    
T  32695412 tatgtttggtatcacggttaatatgtcagaatcacaataatccatcgtgattttttaaaagctacactttataacttctacaaaatcatggcggattacc 32695511  T
Q  156 gtgattctg 164  Q
     | ||||||    
T  32695512 ataattctg 32695520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 30808523 - 30808440
Alignment:
Q  105 attttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaaca 188  Q
    |||||| |||||||||| ||| ||| || |  ||||||| ||||||| ||||||||||||| ||||||||| ||||| ||||||    
T  30808523 atttttcaaaagttacattttgtagctttttcaaaatcacgatggatcaccgtgattctgatatatccaccatgataccaaaca 30808440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 189
Target Start/End: Complemental strand, 33944851 - 33944756
Alignment:
Q  94 gatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaacat 189  Q
    |||||| | ||||| |||||||| || |||||  || ||||  ||||||| ||||||| ||||||||||| ||| ||||||| |||||||||||||    
T  33944851 gatccatcgtgattctttaaaagctaaactttgcagcttctgcaaaatcacgatggatcaccgtgattctaacacatccaccgtgatatcaaacat 33944756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 32234553 - 32234436
Alignment:
Q  56 tatgtttggtatcatggtgagtatataagaatcacgacgatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatg--gatta 153  Q
    |||||||||||||||||||  ||| | ||||||||   |||||||||| ||||| || ||| |||||||| ||| |||||| |||||| | ||   || |    
T  32234553 tatgtttggtatcatggtggatatgtcagaatcacagtgatccaccataattttctataagctacactttgtagcttctatgaaatcacggtgatcatca 32234454  T
Q  154 ccgtgattctgacatatc 171  Q
    ||||||||||||||||||    
T  32234453 ccgtgattctgacatatc 32234436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 34197875 - 34197909
Alignment:
Q  155 cgtgattctgacatatccaccttgatatcaaacat 189  Q
    ||||||||||||||||||||| |||||||||||||    
T  34197875 cgtgattctgacatatccaccgtgatatcaaacat 34197909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 32234500 - 32234552
Alignment:
Q  137 aaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaacat 189  Q
    ||||| ||| ||||| || |||||||||||||||||||| ||||| |||||||    
T  32234500 aaaattatggtggatcactgtgattctgacatatccaccatgataccaaacat 32234552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 810833 - 810771
Alignment:
Q  107 tttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacata 169  Q
    ||||| |||| |||||||| ||| ||||||||||||||| ||||| ||| |||||||||||||    
T  810833 tttttgaaagctacactttgtagcttctataaaatcatggtggatcaccatgattctgacata 810771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 23944565 - 23944632
Alignment:
Q  103 tgattttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatat 170  Q
    |||||||| |||| |||||||||||| ||| |  ||||||| |||| |||| ||||||||||||||||    
T  23944565 tgatttttaaaaaattacactttataatttttgcaaaatcacgatgaattatcgtgattctgacatat 23944632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 14222651 - 14222732
Alignment:
Q  94 gatccaccatgattttttaaaagttacactttatagtttctataaaatcatgatggattaccgtgattctgacatatccacc 175  Q
    |||| ||| |||||||| ||||  |||||||||||| |||  |||||||||| ||||| ||| ||||||||| ||| |||||    
T  14222651 gatcgaccgtgatttttgaaaaactacactttatagcttcagtaaaatcatggtggatcaccatgattctgatatagccacc 14222732  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 31215818 - 31215855
Alignment:
Q  154 ccgtgattctgacatatccaccttgatatcaaacatgt 191  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  31215818 ccgtgattctgacacatccaccttgataccaaacatgt 31215855  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 27664089 - 27664141
Alignment:
Q  94 gatccaccatgattttttaaaagttacactttatagtttctataaaatcatga 146  Q
    |||||||| ||||||| ||||||||||||||||||  || || ||||||||||    
T  27664089 gatccaccttgattttgtaaaagttacactttataccttttacaaaatcatga 27664141  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 172515 - 172567
Alignment:
Q  83 agaatcacgacgatccaccatgattttttaaaagttacactttatagtttcta 135  Q
    ||||||||||| |||||||||||||||| ||||| |||||||| ||| |||||    
T  172515 agaatcacgacaatccaccatgatttttcaaaagctacactttgtagcttcta 172567  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 58600 - 58667
Alignment:
Q  121 actttatagtttctataaaatcatgatggattaccgtgattctgacatatccaccttgatatcaaaca 188  Q
    |||||| ||||| | |||||||| ||||||| ||||| ||||||||||| ||||| | ||||||||||    
T  58600 actttaaagtttgtgtaaaatcacgatggatcaccgtaattctgacatacccaccataatatcaaaca 58667  T

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