View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17152_low_37 (Length: 416)
Name: NF17152_low_37
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17152_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 35032242 - 35032494
Alignment:
| Q |
7 |
caccaccaacaacaacaataatgaaaatcaagtatcgaacactgaagttggttgctctgctaaacaaaagaagagaagagatttgatcgatttaaatgaa |
106 |
Q |
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| T |
35032242 |
caccaacaacaacaacaataatgaaaatcaagtattgaacattgaagttgattgttctgctaaacaaaagaagagaagagatttgatcgatttaaatgaa |
35032341 |
T |
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| Q |
107 |
tcttctccttcttctgattattccgaggtatttatatactctctttactctgatacatgtaaagatgatgatcaagatcatgtatttacaaaatatata- |
205 |
Q |
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| T |
35032342 |
tctcctccttctcctgattattccgaggtatttatatactctctttactctgatacatgtaaagatgatgatcaagatcatgtatttacaaaatatatat |
35032441 |
T |
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| Q |
206 |
-gagacaatgatataatgattaacttttaaaacaatataaaaaatttcataca |
257 |
Q |
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| T |
35032442 |
tgagacaatgatataatgattaacttttaaaacaatataaaaaatttcataca |
35032494 |
T |
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