View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17152_low_48 (Length: 370)
Name: NF17152_low_48
Description: NF17152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17152_low_48 |
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Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 26 - 355
Target Start/End: Original strand, 14741663 - 14741992
Alignment:
| Q |
26 |
cctgaattagcaagctccttaagcaacttccaagactgagtttgacgccaatcttcaaccaaacctttactctgcatatcttgaagaacatcacgcaact |
125 |
Q |
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| T |
14741663 |
cctgaattagcaagctccttaagcaacttccaagactgagtttgacgccaatcttcaaccaaacctttactctgcatatcttgaagaacatcacgcaact |
14741762 |
T |
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| Q |
126 |
ctctttgaaaatgatcaaaaagagttggataatgagtacaagctttcaaacaagtaacttcaagaccaagtggcataggaacagcattcaaataaggttg |
225 |
Q |
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| T |
14741763 |
ctctttgaaaatgatcaaaaagagtaggataatgagtacaagctttcaaacaagtaacttcaagaccaagtggcataggaacagcattcaaataaggttg |
14741862 |
T |
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| Q |
226 |
tgcttgaataacaaacgtaagaccaggtcccattctttgtttcatctcagaaaactccaaatcttcaagtaactcagcagaagcaatctcaaaagccata |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
14741863 |
tgcttgaataacaaacgtaagaccaggtcccattctttgtttcatttcagaaaactccaaatcttcaagtaactcagcagaagcaatctcaaatgccata |
14741962 |
T |
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| Q |
326 |
gatttcatactctcacgtatccaacttact |
355 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
14741963 |
gatttcatactctcacgtatccaacttact |
14741992 |
T |
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