View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17153_high_11 (Length: 257)
Name: NF17153_high_11
Description: NF17153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17153_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 40634045 - 40633812
Alignment:
| Q |
6 |
agtgagaagaaggttacagtttgagtgatgacaaattaaacaatagaaaatatattgacaacaaatattgtcggatactatataaacataagatttcgag |
105 |
Q |
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| T |
40634045 |
agtgaaaagaaggttacagtttgagtgatgacaaattaaacaatagaaaatatattgacaacaaatattgtcggatactatataaacataagatttcgag |
40633946 |
T |
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| Q |
106 |
ttttatgtatttgttttctttctttcaatcacatcggcggtgttagaactgtgacgttcaaataataacactatacatatataagtaatatttgagcagt |
205 |
Q |
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| T |
40633945 |
ttttatgtatttgttttctttctttcaatcacatcggcggtgttagaattgtgacgttcaaatcataacactatacatatataagtaatatttgagcaat |
40633846 |
T |
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| Q |
206 |
ttatcaaaacaaagggaatttttcaaggcattaa |
239 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
40633845 |
ttatcaaaacaaagggaatttttcaaggcattaa |
40633812 |
T |
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