View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17154_high_16 (Length: 245)
Name: NF17154_high_16
Description: NF17154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17154_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 45207130 - 45207353
Alignment:
| Q |
1 |
ctacatttgtgaaaatcatatatgaatggttaaatattagttagctcttttagtgatgactaataatgatatttttgtattgataggaatgttgaggagg |
100 |
Q |
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| T |
45207130 |
ctacatttgtcaaaatcatatatgaatggttaaatattagttagctcttttagtgatgactaataatgatatttttgtattcataggaatgttgaggagg |
45207229 |
T |
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| Q |
101 |
agaaagaggtgattctgcctaatggcataaggttaattatttatttcacacagtatgattagaagatttgaaaattacatacaaatattgtgtgaatcat |
200 |
Q |
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||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45207230 |
agaaagaggtgattctgccaaatggcataaggttaa----ttatttcacacagtatgattagaagatttgaaaattacatacaaatattgtgtgaatcat |
45207325 |
T |
|
| Q |
201 |
ttttgtgataatatgtacaggtactatg |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
45207326 |
ttttgtgataatatgtacaggtactatg |
45207353 |
T |
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