View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17154_low_9 (Length: 303)
Name: NF17154_low_9
Description: NF17154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17154_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 24572406 - 24572677
Alignment:
| Q |
11 |
aaatctcttacgacttagactaattcattcattgttaataaagataaaataacaaataaacatacactacacatccattgatgaatttcttttagaaaat |
110 |
Q |
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| T |
24572406 |
aaatctcttactacttacactaattcattcattgttaataaaggtaaaataacaaataaacatacactaca--tccattgatgaatttcttttagaaaat |
24572503 |
T |
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| Q |
111 |
ggaatacagttgaagagattaagaatagttgcaagcaataattttctggaattaaaatgatagctggtacgtgctacataaatatagtatagtgtaaact |
210 |
Q |
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| T |
24572504 |
ggaatacagttgaagaaattaagaatagttgcaagcaataattttctggaataaaaatgatagctggtacgtgctacataaatatagtatagtgtaaact |
24572603 |
T |
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| Q |
211 |
ataaataaatgtatagtacgattcatggcctacgatattcaaatgtctgtttattaataaattcttctgtcaat |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24572604 |
ataaataaatgtatagtacgattcatggcctacgatattcaaatgtctgtttattaataaattcttctgtcaat |
24572677 |
T |
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