View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17155_low_13 (Length: 207)
Name: NF17155_low_13
Description: NF17155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17155_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 6545044 - 6544870
Alignment:
| Q |
1 |
tgtaggagataaatttttgtttacatcaaacaattttcataacatagtataatattagtgtctctataaacaagtgatttagatttctatcaaagattat |
100 |
Q |
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| T |
6545044 |
tgtaggagataaatttttgtttacatcaaacaattttcata----------------gtgtctctataa-caagtgatttagatttctatcaaagattat |
6544962 |
T |
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| Q |
101 |
gaaaaatgtccgtgaccgcgacctgagctgtgacatcaaggttttttcatgttttcatcattaaattgtgatggtcgggtcaatcatatttg |
192 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |
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| T |
6544961 |
gaaaaatgtccgtgaccgcgacctgagccgtgacatcaaggttttttcatgttttcatcattaaattgtgatggtcgcgtcaatcgtatttg |
6544870 |
T |
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