View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17155_low_5 (Length: 329)
Name: NF17155_low_5
Description: NF17155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17155_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 6479849 - 6479551
Alignment:
| Q |
19 |
ggtaagtcatggaacattggtgacttattgtttatttaatatttcatctggaagaagaagaaaacataattttagtggaaataatcattttaggtttgat |
118 |
Q |
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| T |
6479849 |
ggtaagtcatggaacattggtgacttattgtttatttaatattccatctggaagaagaagaaaacataattttagtggaaataatcattttaggtttgat |
6479750 |
T |
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| Q |
119 |
caaagtgatatttgctttcaatctatgaagcttgtatactnnnnnnnnttcgcgtatacacgtatccatattgtgttgcacctgcacttgtattacgtat |
218 |
Q |
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| T |
6479749 |
caaagtgatatttgctttcaatctatgaagcttttatactgaaaaaatttcgcgtatacacgtatccatattgtgttgcacctgctcgtgtattacgtat |
6479650 |
T |
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| Q |
219 |
ctggaattcataggtttcaatattggtaactataattaacttctgctgatgggaatatatcagagatagtattaatgaaattgaaatataatcgagtat |
317 |
Q |
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| T |
6479649 |
ctggatttcataggtttcaatattggtaactataattaacttctgctgatgggaatatatcagtgatagtattaatgaaattgaaatgtaattgagtat |
6479551 |
T |
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