View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17156_high_4 (Length: 308)
Name: NF17156_high_4
Description: NF17156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17156_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 13137827 - 13137545
Alignment:
| Q |
18 |
agagggtattgcaaattcgggggtatacaaatcttgtataagtgttaaacaagattacattatagagaccactattgtttcatatgataattcatacact |
117 |
Q |
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| T |
13137827 |
agagggtattgcaaattcgggggtatacaaatcttgtataagtgttaaacaagattacattatagagaccactattgtttcatatgataattcatacact |
13137728 |
T |
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| Q |
118 |
gacaannnnnnngttctacaaatgaagaaaaagaaaaaccatgccaatgcttacatggtgactatggcacactattatgttaccaactttgctggtcttt |
217 |
Q |
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| T |
13137727 |
gacaatttttttgttctacaaatgaagaaaaagaaaaaccatgccaatgcttacatggtgactatggcacactattatgttaccaactttgctggtcttt |
13137628 |
T |
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| Q |
218 |
cttctgcagcaaaaatataccgtagtagaggaaaaggttttattgttgaagtgaagggtccttacaaacatccaagtgatgat |
300 |
Q |
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| T |
13137627 |
cttctgcagcaaaaatataccgtagtagaggaaaaggttttattgttgaagtgaagggtccttacaaacatccaagtgatgat |
13137545 |
T |
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