View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17157_high_5 (Length: 393)

Name: NF17157_high_5
Description: NF17157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17157_high_5
NF17157_high_5
[»] chr6 (25 HSPs)
chr6 (196-393)||(16566327-16566524)
chr6 (196-393)||(188984-189181)
chr6 (196-393)||(17684476-17684673)
chr6 (196-393)||(17691447-17691644)
chr6 (196-393)||(25537166-25537363)
chr6 (196-393)||(11651726-11651923)
chr6 (196-393)||(29308893-29309090)
chr6 (196-393)||(29315853-29316050)
chr6 (196-393)||(27381259-27381456)
chr6 (196-393)||(27471642-27471839)
chr6 (196-393)||(13359276-13359473)
chr6 (232-393)||(20553594-20553755)
chr6 (212-386)||(8509941-8510116)
chr6 (8-95)||(10623387-10623474)
chr6 (216-387)||(27925772-27925948)
chr6 (231-393)||(17850502-17850663)
chr6 (200-255)||(31258065-31258120)
chr6 (99-145)||(11651630-11651676)
chr6 (99-133)||(25537427-25537461)
chr6 (99-145)||(27381505-27381551)
chr6 (99-145)||(27471888-27471934)
chr6 (231-308)||(28605854-28605931)
chr6 (101-145)||(17691693-17691737)
chr6 (99-134)||(29308798-29308833)
chr6 (99-134)||(29315758-29315793)
[»] scaffold0234 (4 HSPs)
scaffold0234 (196-393)||(2328-2525)
scaffold0234 (196-393)||(11219-11416)
scaffold0234 (99-145)||(2574-2620)
scaffold0234 (99-145)||(11465-11511)
[»] scaffold0063 (1 HSPs)
scaffold0063 (196-393)||(5532-5729)
[»] chr7 (28 HSPs)
chr7 (196-393)||(18561010-18561207)
chr7 (196-393)||(29327787-29327984)
chr7 (196-393)||(15152446-15152643)
chr7 (196-393)||(11536069-11536266)
chr7 (198-393)||(11542987-11543182)
chr7 (196-393)||(12750829-12751026)
chr7 (196-393)||(15148145-15148342)
chr7 (199-393)||(12738542-12738736)
chr7 (196-392)||(18257850-18258046)
chr7 (5-95)||(19220288-19220378)
chr7 (199-381)||(13392157-13392338)
chr7 (215-389)||(2364917-2365090)
chr7 (5-95)||(41254183-41254273)
chr7 (8-95)||(15893643-15893730)
chr7 (199-286)||(39111819-39111905)
chr7 (226-386)||(7396221-7396382)
chr7 (38-95)||(23291984-23292041)
chr7 (267-328)||(3132748-3132809)
chr7 (99-145)||(12738443-12738489)
chr7 (99-143)||(15152350-15152394)
chr7 (99-143)||(29327690-29327734)
chr7 (99-134)||(2653296-2653331)
chr7 (99-134)||(11543244-11543279)
chr7 (99-145)||(12750733-12750779)
chr7 (222-272)||(29982995-29983045)
chr7 (196-225)||(2653207-2653236)
chr7 (243-308)||(10234179-10234244)
chr7 (98-131)||(15148048-15148081)
[»] chr4 (36 HSPs)
chr4 (196-393)||(4426611-4426807)
chr4 (196-393)||(5707323-5707520)
chr4 (196-393)||(19926767-19926964)
chr4 (196-393)||(5713951-5714148)
chr4 (196-393)||(26970466-26970663)
chr4 (196-393)||(28393141-28393338)
chr4 (196-393)||(55612686-55612883)
chr4 (199-393)||(868603-868797)
chr4 (205-391)||(8845215-8845401)
chr4 (205-391)||(8858179-8858365)
chr4 (196-393)||(18262215-18262412)
chr4 (196-393)||(26963643-26963840)
chr4 (196-393)||(10621340-10621537)
chr4 (196-393)||(10628419-10628616)
chr4 (196-393)||(18269071-18269273)
chr4 (196-308)||(12357139-12357251)
chr4 (201-392)||(20311299-20311491)
chr4 (199-393)||(10677562-10677753)
chr4 (199-393)||(10891202-10891393)
chr4 (199-393)||(35223576-35223760)
chr4 (199-393)||(5668132-5668327)
chr4 (196-338)||(5616216-5616358)
chr4 (219-392)||(21454145-21454319)
chr4 (99-145)||(5707228-5707274)
chr4 (99-145)||(5713856-5713902)
chr4 (99-145)||(19927013-19927059)
chr4 (99-145)||(26963548-26963594)
chr4 (99-145)||(26970371-26970417)
chr4 (97-134)||(10628676-10628713)
chr4 (98-134)||(12357043-12357079)
chr4 (242-309)||(39074278-39074346)
chr4 (99-146)||(4426856-4426903)
chr4 (99-134)||(10621597-10621632)
chr4 (99-134)||(28393399-28393434)
chr4 (330-389)||(39074211-39074270)
chr4 (101-145)||(868507-868551)
[»] chr3 (46 HSPs)
chr3 (196-393)||(13211305-13211502)
chr3 (196-393)||(18522666-18522863)
chr3 (199-393)||(17781125-17781319)
chr3 (196-393)||(6110067-6110264)
chr3 (196-393)||(10572599-10572796)
chr3 (196-393)||(13516814-13517011)
chr3 (196-393)||(16482490-16482687)
chr3 (196-393)||(18519981-18520175)
chr3 (199-393)||(10579362-10579556)
chr3 (199-393)||(15600891-15601085)
chr3 (199-393)||(15607436-15607630)
chr3 (196-393)||(17200191-17200388)
chr3 (199-393)||(19089752-19089946)
chr3 (199-393)||(32056907-32057101)
chr3 (196-393)||(13248610-13248807)
chr3 (196-379)||(8490491-8490674)
chr3 (199-393)||(15357593-15357787)
chr3 (199-393)||(1647528-1647726)
chr3 (196-354)||(18640792-18640950)
chr3 (212-393)||(15342226-15342407)
chr3 (199-392)||(29924977-29925170)
chr3 (199-392)||(29974130-29974323)
chr3 (196-381)||(16200129-16200313)
chr3 (196-381)||(16200435-16200619)
chr3 (200-393)||(24253395-24253589)
chr3 (5-94)||(52969351-52969440)
chr3 (299-393)||(17136465-17136559)
chr3 (5-95)||(6144913-6145003)
chr3 (5-95)||(13267991-13268080)
chr3 (196-256)||(18534759-18534819)
chr3 (10-95)||(26755391-26755476)
chr3 (196-240)||(18510925-18510969)
chr3 (97-145)||(17136135-17136183)
chr3 (99-145)||(6109972-6110018)
chr3 (99-145)||(8490396-8490442)
chr3 (99-145)||(13248515-13248561)
chr3 (99-145)||(18640999-18641045)
chr3 (99-143)||(13211211-13211255)
chr3 (99-143)||(17781370-17781414)
chr3 (99-143)||(19089997-19090041)
chr3 (99-134)||(10579618-10579653)
chr3 (99-145)||(13516719-13516765)
chr3 (99-145)||(17200437-17200483)
chr3 (97-143)||(18519883-18519929)
chr3 (99-131)||(15601152-15601184)
chr3 (99-131)||(15607697-15607729)
[»] chr1 (25 HSPs)
chr1 (196-393)||(18252033-18252230)
chr1 (196-393)||(16359042-16359239)
chr1 (196-393)||(21171240-21171437)
chr1 (196-393)||(27131416-27131613)
chr1 (196-393)||(27310584-27310781)
chr1 (196-385)||(18532529-18532718)
chr1 (199-393)||(36816640-36816834)
chr1 (196-393)||(3855926-3856123)
chr1 (199-393)||(22657228-22657423)
chr1 (5-95)||(33804983-33805073)
chr1 (5-95)||(44709996-44710086)
chr1 (199-393)||(27277564-27277756)
chr1 (5-95)||(50518038-50518128)
chr1 (5-95)||(45907747-45907837)
chr1 (227-340)||(12006599-12006712)
chr1 (227-392)||(12014292-12014457)
chr1 (10-95)||(12864691-12864775)
chr1 (205-391)||(9917927-9918106)
chr1 (223-295)||(3403248-3403320)
chr1 (223-295)||(3443499-3443571)
chr1 (99-145)||(18251936-18251982)
chr1 (99-145)||(18532767-18532813)
chr1 (99-145)||(27310831-27310877)
chr1 (199-268)||(30720625-30720694)
chr1 (99-134)||(16359301-16359336)
[»] chr8 (21 HSPs)
chr8 (199-393)||(24642655-24642849)
chr8 (199-392)||(6094129-6094322)
chr8 (198-393)||(21940670-21940865)
chr8 (196-393)||(22171492-22171687)
chr8 (196-393)||(28554886-28555083)
chr8 (199-326)||(24636860-24636987)
chr8 (5-91)||(9138514-9138600)
chr8 (5-95)||(23256407-23256497)
chr8 (205-393)||(38232384-38232570)
chr8 (5-95)||(757543-757633)
chr8 (214-392)||(2375027-2375203)
chr8 (10-95)||(14825340-14825425)
chr8 (231-294)||(10920234-10920297)
chr8 (99-145)||(6094031-6094077)
chr8 (99-145)||(24642556-24642602)
chr8 (99-143)||(22070108-22070152)
chr8 (297-345)||(30200270-30200318)
chr8 (52-91)||(16668577-16668616)
chr8 (99-134)||(21940573-21940608)
chr8 (99-134)||(22171396-22171431)
chr8 (223-293)||(32872948-32873019)
[»] chr5 (26 HSPs)
chr5 (196-393)||(24695473-24695670)
chr5 (199-393)||(18569870-18570064)
chr5 (196-393)||(19714505-19714702)
chr5 (199-393)||(19707225-19707419)
chr5 (198-387)||(27347491-27347679)
chr5 (199-393)||(22547023-22547217)
chr5 (5-95)||(25763374-25763464)
chr5 (5-95)||(23350357-23350447)
chr5 (197-378)||(17285754-17285935)
chr5 (199-295)||(39537968-39538064)
chr5 (5-91)||(20231494-20231580)
chr5 (5-95)||(34827537-34827626)
chr5 (197-378)||(17298907-17299088)
chr5 (259-393)||(18807041-18807175)
chr5 (199-330)||(31886537-31886668)
chr5 (306-393)||(39538701-39538788)
chr5 (45-91)||(13849096-13849142)
chr5 (99-145)||(27347732-27347778)
chr5 (219-309)||(33477389-33477479)
chr5 (8-91)||(16491105-16491188)
chr5 (99-145)||(19707472-19707518)
chr5 (99-145)||(19714752-19714798)
chr5 (99-145)||(24695719-24695765)
chr5 (243-318)||(11479420-11479496)
chr5 (98-133)||(39537869-39537904)
chr5 (53-91)||(31056776-31056814)
[»] chr2 (13 HSPs)
chr2 (199-385)||(21330263-21330449)
chr2 (212-393)||(18796525-18796706)
chr2 (200-391)||(18619812-18620002)
chr2 (199-338)||(19692598-19692737)
chr2 (257-393)||(20977956-20978092)
chr2 (5-95)||(29811421-29811511)
chr2 (5-95)||(30215148-30215238)
chr2 (227-393)||(36270199-36270366)
chr2 (227-385)||(18822115-18822275)
chr2 (229-384)||(36802664-36802820)
chr2 (235-386)||(24471642-24471792)
chr2 (99-145)||(21330503-21330549)
chr2 (26-91)||(26269038-26269103)
[»] scaffold0390 (4 HSPs)
scaffold0390 (196-393)||(6941-7138)
scaffold0390 (196-393)||(13957-14154)
scaffold0390 (99-143)||(7189-7233)
scaffold0390 (99-143)||(14205-14249)
[»] scaffold0433 (2 HSPs)
scaffold0433 (200-393)||(7114-7307)
scaffold0433 (99-145)||(7015-7061)
[»] scaffold0220 (2 HSPs)
scaffold0220 (196-393)||(18291-18488)
scaffold0220 (99-145)||(18196-18242)
[»] scaffold0186 (2 HSPs)
scaffold0186 (199-393)||(25997-26191)
scaffold0186 (99-145)||(26240-26286)
[»] scaffold0657 (2 HSPs)
scaffold0657 (199-393)||(999-1193)
scaffold0657 (99-145)||(901-947)
[»] scaffold0008 (1 HSPs)
scaffold0008 (196-372)||(230369-230544)
[»] scaffold0176 (3 HSPs)
scaffold0176 (199-256)||(8447-8504)
scaffold0176 (99-134)||(8567-8602)
scaffold0176 (44-91)||(26176-26223)
[»] scaffold0326 (1 HSPs)
scaffold0326 (99-145)||(16523-16569)
[»] scaffold0203 (1 HSPs)
scaffold0203 (99-145)||(23779-23825)
[»] scaffold0767 (1 HSPs)
scaffold0767 (99-134)||(2-37)
[»] scaffold0565 (1 HSPs)
scaffold0565 (212-243)||(10127-10158)
[»] scaffold0032 (1 HSPs)
scaffold0032 (222-344)||(92194-92317)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 2e-93; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 16566524 - 16566327
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16566524 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 16566425  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  16566424 ccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 189181 - 188984
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  189181 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 189082  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  189081 ccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 188984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 17684673 - 17684476
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17684673 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 17684574  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  17684573 ccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17684476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 17691644 - 17691447
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17691644 aggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 17691545  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  17691544 ccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtagac 17691447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 25537363 - 25537166
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  25537363 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagacc 25537264  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  25537263 ccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 25537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 11651726 - 11651923
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11651726 aggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 11651825  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  11651826 ccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagac 11651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 29308893 - 29309090
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  29308893 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagagc 29308992  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  29308993 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 29309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 29315853 - 29316050
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  29315853 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagagc 29315952  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  29315953 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 29316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 27381456 - 27381259
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27381456 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27381357  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  27381356 ccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 27381259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 27471839 - 27471642
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27471839 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27471740  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||| ||||| |||||| ||||||||| |||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  27471739 ccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 27471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 13359473 - 13359276
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||| |||| ||     
T  13359473 aggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaact 13359374  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||  | |||||| ||||||||||||||||||| ||||||||  || || || | ||||||||| || |||||||||| ||| |||||    
T  13359373 ccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagac 13359276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 393
Target Start/End: Complemental strand, 20553755 - 20553594
Alignment:
Q  232 aataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccg 331  Q
    ||||||||| |||| |||| ||||| |||||||| || ||||||||  ||||||| |||||| ||| ||||| ||||| | ||||||||||||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  332 tagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||| ||  |||||||  ||||||||||  ||||||||||| ||| | |||||| |||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagac 20553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 386
Target Start/End: Original strand, 8509941 - 8510116
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-ccccgttaaacataagg 310  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||| ||| ||||||||||| |||  |||||||| ||||| |||| ||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  311 aaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 386  Q
    |   |||| |||||||||  ||||| ||||||||||   || ||||||| ||||||| |||| |||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgtg 8510116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 10623474 - 10623387
Alignment:
Q  8 agattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||| ||||||||||||||||||   |  ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10623474 agattataatgagctaagtcgggcggcgagtgtagcggtgatagaagatgacgaataattgtacattattgaaaatcttgatcccgat 10623387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 387
Target Start/End: Original strand, 27925772 - 27925948
Alignment:
Q  216 tgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaac---attaa--gtataacttaattgtgagaccccgttaaacataagg 310  Q
    |||||||||||||||||||||||||| |||||||  |||| ||||||| |||||   |||||  || | ||||||| ||||||| || ||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  311 aaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgg 387  Q
    |||||||||||||||||||  ||||||| |||||||   |||||  ||| |||| ||||| | ||||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtgg 27925948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 393
Target Start/End: Complemental strand, 17850663 - 17850502
Alignment:
Q  231 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatcc 330  Q
    |||||||||||||| ||||| |||| |||||  |||||||||| |||  |||||||||||| | ||  ||||| | ||||| | |||||||||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  331 gtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     |||||||||||| |||  |||| | ||| |||| ||| |||||||||||||| |||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagac 17850502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  200 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 255  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 11651630 - 11651676
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggct 11651676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 25537461 - 25537427
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattga 133  Q
    |||||||||||||||||||||||||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattga 25537427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27381551 - 27381505
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggct 27381505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27471934 - 27471888
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggct 27471888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 28605854 - 28605931
Alignment:
Q  231 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataa 308  Q
    |||||||||  |||||||||||| | |||||||||| || |||||| | ||| |||||||||||| ||||||| ||||    
T  28605854 taataaagtatctagaatagttattttgtttaatgggactttaagtgtgactaaattgtgagacctcgttaaagataa 28605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 17691737 - 17691693
Alignment:
Q  101 ttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggct 17691693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 29308798 - 29308833
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgat 29308833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 29315758 - 29315793
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgat 29315793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 166; Significance: 1e-88; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 2525 - 2328
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2525 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 2426  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  2425 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 11416 - 11219
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11416 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 11317  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  11316 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 11219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 2620 - 2574
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggct 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 11511 - 11465
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggct 11465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 5532 - 5729
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5532 aggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 5631  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  5632 ccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 1e-88; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18561010 - 18561207
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18561010 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagacc 18561109  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||    
T  18561110 ccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagac 18561207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 29327787 - 29327984
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29327787 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagacc 29327886  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  29327887 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 29327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 15152446 - 15152643
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15152446 aggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 15152545  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15152546 ccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15152643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 11536266 - 11536069
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  11536266 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgagacc 11536167  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  11536166 ccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 11536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 198 - 393
Target Start/End: Complemental strand, 11543182 - 11542987
Alignment:
Q  198 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11543182 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcagacccc 11543083  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  11543082 attaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 11542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 12750829 - 12751026
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  12750829 aggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagacc 12750928  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||| |||||    
T  12750929 tcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagac 12751026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 15148145 - 15148342
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  15148145 aggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagacc 15148244  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15148245 ccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15148342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 12738542 - 12738736
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||  |    
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 196 - 392
Target Start/End: Complemental strand, 18258046 - 18257850
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18258046 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagacc 18257947  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    || ||||||| ||||| ||||||||||||||||||||||||||| ||| |||  ||||  |||| || ||| ||||| |||||||||||||| ||||    
T  18257946 ccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggataga 18257850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 19220288 - 19220378
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19220288 ggtagattataatgagctaagtcgggcggcgggtcaagcggtggtaaaagatgatgaagaattgtacattattgaaaatcttgatcccgat 19220378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||||| | ||||||| |||||| |||     
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 381  Q
    |||||   ||||| |||||||||||||||||  ||||||| ||||||||  ||  | |||| ||||||| |||| ||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 389
Target Start/End: Original strand, 2364917 - 2365090
Alignment:
Q  215 ttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaat 314  Q
    ||||| |||||||||||||||||||| |||||||| ||||||| | |||||||||||||||| |  |||||| |||||| ||| ||||||  || || ||    
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  315 tattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggt 389  Q
    |||||||||| ||| ||||||||| | ||||||  || ||||||| ||||||| |||| ||||||| ||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggt 2365090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 41254273 - 41254183
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||| ||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41254273 ggtagattataatgagctaagtcgagcggcgggtcaagcgatggtagaagatgatgaagaattatacattattgaaaatcttgatcccgat 41254183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 15893643 - 15893730
Alignment:
Q  8 agattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||| |||| ||||||||||||| | |  || |||| |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  15893643 agattataatgagttaagtcgggcggcgggtgtagaggtgatagaagatgacgaagaattgtacactattgaaaatcttgatcccgat 15893730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 286
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaat 286  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  |||| |||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 386
Target Start/End: Original strand, 7396221 - 7396382
Alignment:
Q  226 caaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 324  Q
    |||||||| || ||| ||||||||||||||   ||||| ||||||||||||||| |||||||  ||||||||  ||||||||||| ||||||||||||||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  325 gtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 386  Q
      ||  |||||||||| ||| ||  || |  |||   ||||||||||| |||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgtg 7396382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 23292041 - 23291984
Alignment:
Q  38 tcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  23292041 tcaagaggtgatagaagatgatgaaaaattgtacattattgaaaatctttatcccgat 23291984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 3132748 - 3132809
Alignment:
Q  267 aacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtat 328  Q
    |||||||||| |||||||||||||||||||| ||||||||||||  |||||| | |||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataaggtcattattatgaaagtat 3132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 12738443 - 12738489
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggct 12738489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 15152350 - 15152394
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttgg 15152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 29327690 - 29327734
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttgg 29327734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 2653331 - 2653296
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgat 2653296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 11543279 - 11543244
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgat 11543244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 12750733 - 12750779
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggct 12750779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 29982995 - 29983045
Alignment:
Q  222 gtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt 272  Q
    |||||||| ||||||||||  ||||| ||||| ||||||||||||||||||    
T  29982995 gtttcaaagtaataaagtctttagaacagttaatctgtttaatggaacatt 29983045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 225
Target Start/End: Complemental strand, 2653236 - 2653207
Alignment:
Q  196 aggcatttctttattgattttgttttgttt 225  Q
    ||||||||||||||||||||||||||||||    
T  2653236 aggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  243 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataa 308  Q
    |||||||||||||| |||||||| | |||||| |||||||||||  |||||  || ||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 15148048 - 15148081
Alignment:
Q  98 gtgttggattaagccctaatagccaatctatatt 131  Q
    |||||||| |||||||||||||||||||||||||    
T  15148048 gtgttggagtaagccctaatagccaatctatatt 15148081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 4426807 - 4426611
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4426807 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 4426708  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  4426707 ccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 4426611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 5707323 - 5707520
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  5707323 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 5707422  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  5707423 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 5707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 19926964 - 19926767
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19926964 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 19926865  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  19926864 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 19926767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 5713951 - 5714148
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  5713951 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgagacc 5714050  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  5714051 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtagac 5714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 26970466 - 26970663
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26970466 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 26970565  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  26970566 ccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 26970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 28393338 - 28393141
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28393338 aggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 28393239  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  28393238 ccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 28393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 55612686 - 55612883
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55612686 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 55612785  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  55612786 ccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 55612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 868603 - 868797
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  868603 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccg 868702  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  868703 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 868797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 205 - 391
Target Start/End: Original strand, 8845215 - 8845401
Alignment:
Q  205 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 391  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 205 - 391
Target Start/End: Original strand, 8858179 - 8858365
Alignment:
Q  205 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 391  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18262215 - 18262412
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18262215 aggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18262314  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18262315 ccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 26963643 - 26963840
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26963643 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgagacc 26963742  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  26963743 ccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 26963840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 10621537 - 10621340
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  10621537 aggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgagagc 10621438  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  10621437 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 10621340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 10628616 - 10628419
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  10628616 aggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgagagc 10628517  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||| |||||||    
T  10628516 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtagac 10628419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18269071 - 18269273
Alignment:
Q  196 aggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtg 290  Q
    |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18269071 aggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtg 18269170  T
Q  291 agaccccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggta 390  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||| |||||||||||| ||||    
T  18269171 agaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggta 18269270  T
Q  391 gac 393  Q
    |||    
T  18269271 gac 18269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 12357139 - 12357251
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12357139 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 12357238  T
Q  296 ccgttaaacataa 308  Q
    || ||||||||||    
T  12357239 ccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 201 - 392
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  201 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaag-tataacttaattgtgagaccccgt 299  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| | |||| |||||| ||||||| |||||||||||||||||||||| |    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  300 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    |||||||||||| | | || |||||||||  || ||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 10677753 - 10677562
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| |||     
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||  || || |||||||||||||||||||||||||||||||| |||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctttagtgaaa--tgagataacattaaagtatatagactattatgtgggtagac 10677562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 10891393 - 10891202
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| |||     
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||  || || |||||||||||||||||||||||||||||||| |||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctttagtgaaa--tgagataacattaaagtatatagactattatgtgggtagac 10891202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||          ||    
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    | ||||  ||||| |||||||||||||||| |||||||||||||||||| |||    |||| |||||||||||||||||||||||||||||||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 5668327 - 5668132
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||| | | ||||| |||||| |||     
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  299 ttaaacataaggaaattattcttaaag--tatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||   ||||| |||||||||||||  |||  |||||||||||||||||  ||  |||||| ||||||| |||| |||||||||||||| |||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagac 5668132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 5616216 - 5616358
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||| |||  ||||||||||||| | ||| |||  ||||| |    
T  5616216 aggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagatc 5616315  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaa 338  Q
    |||||||||   |||| |||||||||||||||||||| |||||    
T  5616316 ccgttaaactagaggacattattcttaaagtatccgttgtcaa 5616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 392
Target Start/End: Complemental strand, 21454319 - 21454145
Alignment:
Q  219 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt-aagtataacttaattgtgagaccccgttaaacataaggaaattat 317  Q
    ||||||||||| ||||||||| | ||||||||||||| || ||||||||||||| || | | |||||||  ||||||||| ||||  |||| || |||||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  318 tcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    | ||||| ||||  ||||||| ||||||||  || ||||||| || ||| ||||| ||| ||||||||| |||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtaga 21454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 5707228 - 5707274
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggct 5707274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 5713856 - 5713902
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggct 5713902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19927059 - 19927013
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggct 19927013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 26963548 - 26963594
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggct 26963594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 26970371 - 26970417
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggct 26970417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 10628713 - 10628676
Alignment:
Q  97 agtgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  10628713 agtgttggaataagccctaatagccaatctatattgat 10628676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 12357043 - 12357079
Alignment:
Q  98 gtgttggattaagccctaatagccaatctatattgat 134  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12357043 gtgttggaataagccctaatagccaatctatattgat 12357079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  242 ctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataag 309  Q
    |||||||| |||||| |||||| | ||||||||||||| |||||||  ||||||||| |||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 4426903 - 4426856
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggctc 146  Q
    ||||||| |||| ||||||||||||||||||||||| | |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctc 4426856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 10621632 - 10621597
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgat 10621597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 28393434 - 28393399
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgat 28393399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 39074270 - 39074211
Alignment:
Q  330 cgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggt 389  Q
    ||||||||  ||||||||  ||||||||||||||||||||||  ||||||||| ||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactattacgtgggt 39074211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 868507 - 868551
Alignment:
Q  101 ttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||| ||| |||||||||||||||||||||||| | ||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggct 868551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 13211305 - 13211502
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 13211502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18522666 - 18522863
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18522666 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18522765  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||| |||||||    
T  18522766 ccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagac 18522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 17781319 - 17781125
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 17781125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 6110067 - 6110264
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6110067 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 6110166  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  6110167 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 10572796 - 10572599
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10572796 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 10572697  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  10572696 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 10572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 13516814 - 13517011
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13516814 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagacc 13516913  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||  ||||||||||||||| | ||||||||||||||||||||    
T  13516914 ccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagac 13517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 16482687 - 16482490
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16482687 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 16482588  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  16482587 ccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 16482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18519981 - 18520175
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18519981 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18520080  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| |||||||||   |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18520081 ccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 10579556 - 10579362
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||     
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagac 10579362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 15601085 - 15600891
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  15601085 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15600986  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15600985 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15600891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 15607630 - 15607436
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  15607630 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15607531  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  15607530 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 15607436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 17200388 - 17200191
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  17200388 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatacc 17200289  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || |||||||||| |||| ||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||    
T  17200288 cctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagac 17200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 19089946 - 19089752
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagac 19089752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 32057101 - 32056907
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagac 32056907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 13248610 - 13248807
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13248610 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13248709  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||| |||||||||||||| |||| ||||| |||| |||||||||||| |||||||||||| |||||||    
T  13248710 ccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtagac 13248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 196 - 379
Target Start/End: Original strand, 8490491 - 8490674
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490491 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 8490590  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagacta 379  Q
    || ||||||||||||||| |||||| |||||||| ||||||||||||| |||| ||||| ||||||||||||||||| ||||||    
T  8490591 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 15357787 - 15357593
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  15357787 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 15357688  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||    
T  15357687 ttaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 1647726 - 1647528
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagta----taacttaattgtgagac 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  295 cccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||  | ||||| ||||||||||| |||||||||||||| |||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagac 1647528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 196 - 354
Target Start/End: Complemental strand, 18640950 - 18640792
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  18640950 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 18640851  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtg 354  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  18640850 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 212 - 393
Target Start/End: Complemental strand, 15342407 - 15342226
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagga 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  312 aattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |  |||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagac 15342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 29924977 - 29925170
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| ||||||||||||||||     
T  29924977 catttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgagacccca 29925076  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||| ||||||| |||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||  || ||||||||||| ||||    
T  29925077 ttaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29925170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 29974130 - 29974323
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| ||||||||||||||||     
T  29974130 catttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgagacccca 29974229  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||| ||||||| |||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||  || ||||||||||| ||||    
T  29974230 ttaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgtggataga 29974323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 196 - 381
Target Start/End: Original strand, 16200129 - 16200313
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  16200129 aggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagacc 16200227  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 381  Q
    || ||||||||||||| |||||||||||||||| |||||||||| |||||||  ||||| ||||||||||||||||  ||||||||    
T  16200228 ccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 196 - 381
Target Start/End: Original strand, 16200435 - 16200619
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||     
T  16200435 aggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagact 16200533  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactatt 381  Q
    ||  |||||||||||| |||||||||||||||| |||||||||| |||||||  ||||| ||| ||||||||||||  ||||||||    
T  16200534 ccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 200 - 393
Target Start/End: Complemental strand, 24253589 - 24253395
Alignment:
Q  200 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-ccccg 298  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | ||  |||| |||||||||||||||| ||||||| |||||| ||||     
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    | ||||||||||| | ||||||||||||||  || |||||  ||||||| |||||||| || |||||||||||| |||||||||||| |||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagac 24253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 52969440 - 52969351
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccga 94  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52969440 ggtagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccga 52969351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 17136465 - 17136559
Alignment:
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagac 17136559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 6145003 - 6144913
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| ||||||||||||| ||   | |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  6145003 ggtagattataatgagctaagtcggacgaggggtcaagcggtgatagaagatgatgaagaatagtacattattgaaaatcttgatcccgat 6144913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 13267991 - 13268080
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| ||||||||||| |  ||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13267991 ggtagattataatgagctaagtcaga-ggcgggtcaagcggtggtagaagatgatgaagaatagtacattattgaaaatcttgatcccgat 13268080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 18534759 - 18534819
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18534759 aggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtc 18534819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 26755476 - 26755391
Alignment:
Q  10 attatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||| | |||||||||||||||| | |  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26755476 attataataagctaagtcgggcggccggtgtagcggtgatagaagatgacgaagaattgtacattattgaaaatcttgatcccgat 26755391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 18510925 - 18510969
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18510925 aggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 17136135 - 17136183
Alignment:
Q  97 agtgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  17136135 agtgttggagtaagccctaatagccaatctatattgattgagtttggct 17136183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 6109972 - 6110018
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggct 6110018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 8490396 - 8490442
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggct 8490442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13248515 - 13248561
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggct 13248561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 18641045 - 18640999
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggct 18640999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 13211211 - 13211255
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttgg 13211255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 17781414 - 17781370
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttgg 17781370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 19090041 - 19089997
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttgg 19089997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 10579653 - 10579618
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgat 10579618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13516719 - 13516765
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||| ||||| | ||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggct 13516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 17200483 - 17200437
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||| ||||| | ||||||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggct 17200437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 18519883 - 18519929
Alignment:
Q  97 agtgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||||| |||| ||||||||||||||||||||||| | ||||||    
T  18519883 agtgttggagtaagtcctaatagccaatctatattgattgggtttgg 18519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 15601184 - 15601152
Alignment:
Q  99 tgttggattaagccctaatagccaatctatatt 131  Q
    ||||||| |||||||||||||||||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatatt 15601152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 15607729 - 15607697
Alignment:
Q  99 tgttggattaagccctaatagccaatctatatt 131  Q
    ||||||| |||||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatatt 15607697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 1e-88; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18252033 - 18252230
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18252033 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 18252132  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18252133 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 16359239 - 16359042
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16359239 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagacc 16359140  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||| ||||||||||||| || ||||||||||||||||| || ||  |||||||||||||||| ||||||||||||||||||||    
T  16359139 ccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagac 16359042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 21171437 - 21171240
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  21171437 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagacc 21171338  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  21171337 ccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagac 21171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 27131613 - 27131416
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27131613 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27131514  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||  |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  27131513 ccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 27131416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 27310781 - 27310584
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27310781 aggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 27310682  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     |||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||||    
T  27310681 acgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagac 27310584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 385
Target Start/End: Complemental strand, 18532718 - 18532529
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18532718 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgagacc 18532619  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 385  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||    
T  18532618 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 18532529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 36816834 - 36816640
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||    
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||| |||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagac 36816640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 3856123 - 3855926
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  3856123 aggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgagacc 3856024  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||| |||||||||||| |||  |||||||| ||||||||  ||||| ||||| ||||||||||  ||||||||| ||||||||||    
T  3856023 ccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtagac 3855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 22657423 - 22657228
Alignment:
Q  199 catttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22657423 catttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtgagacccc 22657324  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     ||||||||||||| |  ||||||||||| ||  |||||||||||||||   || |||||||||||||||||||| ||||||| |||||| |||||    
T  22657323 tttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatagac 22657228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 33804983 - 33805073
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33804983 ggtagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 33805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 44710086 - 44709996
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44710086 ggtagattataatgagctaagtcgggcggcgggtcaagcggttgtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 44709996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||  ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||| |  || || ||||||||||||||||||||||||| |||||||||  ||  | |||| |||||||||||| ||||||||||||||||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 50518038 - 50518128
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||| || |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50518038 ggtagattttaatgagttaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 50518128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 45907837 - 45907747
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||  | |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45907837 ggtagattataatgagctaagtcgggcggggggtcaaccggtggtagaagatgatgaagaattgtacattgttgaaaatcttgatcccgat 45907747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 340
Target Start/End: Complemental strand, 12006712 - 12006599
Alignment:
Q  227 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagt 326  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| |  |||||| |||||||||| | ||||||||||| |||||| |||||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  327 atccgtagtcaagc 340  Q
    || |||||||||||    
T  12006612 attcgtagtcaagc 12006599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 392
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  227 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagt 326  Q
    |||||||||||||| ||||||||  ||||| ||||||||||| ||||||| ||| ||||| || ||| ||| |||||||||| ||  |||||||||||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  327 atccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||||||| |||||||| ||  ||| | ||||  |||||||| || |||| ||||||||||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 12864775 - 12864691
Alignment:
Q  10 attatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||| |||||||||||||||||| ||||||| |||| ||| |||||| |||||| |||||||||||||||||||||||||||||    
T  12864775 attataatgagctaagtcgggcggcggatcaagaggtgataggagatgacgaagaa-tgtacattattgaaaatcttgatcccgat 12864691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 205 - 391
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  205 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    |||||||||||||||||||| ||||||||||||||| ||       ||||| |||||||| |||||||||||||||||| ||   |||| ||  |||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgagatcca-ttaaat 9918014  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 391  Q
    ||||||| |||||||||||| ||||  |||| |||||||||||  ||||| |||| |||| ||||||| ||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 3403248 - 3403320
Alignment:
Q  223 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| |||||||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagacc 3403320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 295
Target Start/End: Complemental strand, 3443571 - 3443499
Alignment:
Q  223 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| |||||||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagacc 3443499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18251936 - 18251982
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggct 18251982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 18532813 - 18532767
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggct 18532767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27310877 - 27310831
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggct 27310831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaa 268  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| |||||  |||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 16359336 - 16359301
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgat 16359301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 6e-87; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 24642655 - 24642849
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagac 24642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 199 - 392
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 198 - 393
Target Start/End: Original strand, 21940670 - 21940865
Alignment:
Q  198 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21940670 gcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 21940769  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  21940770 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 21940865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 22171492 - 22171687
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22171492 aggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 22171591  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || |||||||||  |||| |||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| |||||||    
T  22171592 ccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagac 22171687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 28554886 - 28555083
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28554886 aggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 28554985  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || |||||||||| |||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  28554986 ccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 28555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 199 - 326
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  299 ttaaacataaggaaattattcttaaagt 326  Q
    ||||||||||||||| ||||||||||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 9138600 - 9138514
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9138600 ggtagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 9138514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 23256407 - 23256497
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23256407 ggtagattataatgagctaagtcgggcggcgagtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 23256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 393
Target Start/End: Complemental strand, 38232570 - 38232384
Alignment:
Q  205 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaac 304  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||  |   ||| ||||||||||||  ||| || || ||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  305 ataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     |||  | | ||||||||||||||  |||||||| |||||||| |||||||||||   |||||||||| | |||||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagac 38232384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 757543 - 757633
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||||||||  ||||||||||| ||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  757543 ggtagattataacgagctaagtcgagcggcgggtcaagaggtggtagaagatgatgaagaattgtacataattgaaaatcttgatcccgat 757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 392
Target Start/End: Original strand, 2375027 - 2375203
Alignment:
Q  214 tttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaa 313  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | ||| ||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  314 ttattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtaga 392  Q
    ||||| |||||||||  ||||||| | |||||||   ||||||||| |||||||| ||||  ||||||| |||||||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattg-cgagtgagataacattaaagtatatgaactattaagtgggtaga 2375203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 14825340 - 14825425
Alignment:
Q  10 attatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    |||||| |||||||||||||||||| | ||||   ||| ||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  14825340 attataatgagctaagtcgggcggcgggtcaaaaagtgataggagatgacgaataattgtacattattgaaaatcttgatcccgat 14825425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  231 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 294  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 6094031 - 6094077
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggct 6094077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 24642556 - 24642602
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggct 24642602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 22070108 - 22070152
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttgg 22070152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 30200318 - 30200270
Alignment:
Q  297 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttat 345  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| ||||||    
T  30200318 cgttaaaaataaggatattattcttaaagtatacgtagtcaacctttat 30200270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 16668577 - 16668616
Alignment:
Q  52 aagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  16668577 aagatgatgaagatttgtacattattgaaaatattgatcc 16668616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 21940573 - 21940608
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgat 21940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 22171396 - 22171431
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgat 22171431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 32873019 - 32872948
Alignment:
Q  223 tttcaaaataataaagtccctagaatagttagtctgttta-atggaacattaagtataacttaattgtgaga 293  Q
    ||||||||||||||||||| || |||||||  ||  |||| || ||||||||||||| ||||||||||||||    
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgaga 32872948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 24695670 - 24695473
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24695670 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 24695571  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || |||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |||||||    
T  24695570 ccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtagac 24695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 18570064 - 18569870
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  18570064 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgagaccccg 18569965  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| |||||||    
T  18569964 ttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtagac 18569870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 19714702 - 19714505
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19714702 aggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 19714603  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  19714602 ccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19714505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 19707419 - 19707225
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagac 19707225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 387
Target Start/End: Complemental strand, 27347679 - 27347491
Alignment:
Q  198 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccc 297  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  298 gttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgg 387  Q
     ||||||  ||||| ||||||||||||||||  |||||||||||||||||  ||  | |||| |||||||||||| |||||||| |||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactattttgtgg 27347491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 22547217 - 22547023
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |     
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||| ||| ||| |||||| ||||||||| || |||||| ||||||||  |||||||||| |||||||  ||| |||||||||||||| |||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagac 22547023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 25763374 - 25763464
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25763374 ggtagattataatgagctaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 25763464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 23350447 - 23350357
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23350447 ggtagattataatgagctaagtcgggcggcgggtcaagcggtgatagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 23350357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 378
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  197 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc 296  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  297 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagact 378  Q
       |||||  || || |||||||||||||||| | ||||| | ||||||||  || || ||||  |||||||||||||||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 39537968 - 39538064
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  39537968 catttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgagacc 39538064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 20231580 - 20231494
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||||||||| |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  20231580 ggtagattataatgagctaagtcgggtggcgggtcaagcggtggtagaagatgatgaagaatagtatattattgaaaatcttaatcc 20231494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 34827626 - 34827537
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||| ||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34827626 ggtagattataatgagttaagttgggcgacgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatctt-atcccgat 34827537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 378
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  197 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc 296  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||| | |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  297 cgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagact 378  Q
       |||||  || || |||||||||||||||| | ||||| | ||||||||  ||||| ||||  |||||||||||||||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 393
Target Start/End: Complemental strand, 18807175 - 18807041
Alignment:
Q  259 tttaatggaacattaagtataacttaattgtgagaccccgttaaacataa-ggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgaga 357  Q
    |||||||||||||||||| | ||||||| ||||||| || ||||| |||| ||| |||||||||||||||||  ||||||||| ||||||  |||| |||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  358 tatcattaaagcatatagactattatgtgggtagac 393  Q
    || || ||||||||| ||||||||||| ||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagac 18807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 31886537 - 31886668
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||   |||||| |||||| |||||  ||||||| ||||||| ||     
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  299 ttaaacataaggaaattattcttaaagtatcc 330  Q
    ||||  ||||| | | ||||||||||| ||||    
T  31886637 ttaattataagaacaatattcttaaagaatcc 31886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 306 - 393
Target Start/End: Original strand, 39538701 - 39538788
Alignment:
Q  306 taaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||| | |||||||||| ||||| |||| |||||||||||  ||||| ||||||||||||||||  ||||||||||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagac 39538788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 13849142 - 13849096
Alignment:
Q  45 gtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13849142 gtggtagaagatgatgaagaattgtacattattgaacatcttgatcc 13849096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 27347778 - 27347732
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggct 27347732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  219 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataag 309  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||||||| |||||||| | |  |||| |||||||| | |||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 16491188 - 16491105
Alignment:
Q  8 agattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||||||| |||||||||||||||| | | |  ||  ||| ||||||| || |||||||||||| |||||||||||||||||||    
T  16491188 agattataatgagctaagtcgggcgacgggtgtagacgtgatagaagaagacgaagaattgtacgttattgaaaatcttgatcc 16491105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19707518 - 19707472
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggct 19707472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19714798 - 19714752
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggct 19714752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 24695765 - 24695719
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggct 24695719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 11479420 - 11479496
Alignment:
Q  243 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc-cgttaaacataaggaaattatt 318  Q
    ||||||| ||||| ||||||||| || ||||||| | |||| |||||||||||| | ||||||||||||| ||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataaggatattatt 11479496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 39537869 - 39537904
Alignment:
Q  98 gtgttggattaagccctaatagccaatctatattga 133  Q
    ||||||||||||||||||||||||||||||| ||||    
T  39537869 gtgttggattaagccctaatagccaatctatgttga 39537904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 31056814 - 31056776
Alignment:
Q  53 agatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  31056814 agatgatgaagatttgtacattattgaaaatcttaatcc 31056776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 1e-84; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 199 - 385
Target Start/End: Complemental strand, 21330449 - 21330263
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  21330449 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 21330350  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 385  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  21330349 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 21330263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 212 - 393
Target Start/End: Original strand, 18796525 - 18796706
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagga 311  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  312 aattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     |||||||||||| |||| |||||||||||||||||  |||||  |||||||||||||||  ||||||||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagac 18796706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 200 - 391
Target Start/End: Original strand, 18619812 - 18620002
Alignment:
Q  200 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgt 299  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| | |||||||| ||||| ||| |    
T  18619812 atttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccat 18619910  T
Q  300 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtag 391  Q
    |||||| ||||| ||||||||||||||||| || ||||| ||||||||  ||  | ||||  ||||||||||||||||||||||||||||||    
T  18619911 taaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 338
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | |||||||  ||||| | |     
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaa 338  Q
    ||||||  |||||||||||||||||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 257 - 393
Target Start/End: Original strand, 20977956 - 20978092
Alignment:
Q  257 tgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgag 356  Q
    ||||||||||||||||||| |||| |||||  ||||| ||| ||||| ||||||||||||||||||||  |||||||||||||||||| ||  |||||||    
T  20977956 tgtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgag 20978055  T
Q  357 atatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||| ||||||||| |||||||||||||| |||||    
T  20978056 atatcactaaagcatagagactattatgtggatagac 20978092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 29811421 - 29811511
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29811421 ggtagattataatgagttaagtcgggcggcgggtcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 29811511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 30215148 - 30215238
Alignment:
Q  5 ggtagattatactgagctaagtcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcccgat 95  Q
    ||||||||||| |||||||||||||||||| | | ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30215148 ggtagattataatgagctaagtcgggcggcgggttaagcgatggtagaagatgatgaagaattatacattattgaaaatcttgatcccgat 30215238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 393
Target Start/End: Original strand, 36270199 - 36270366
Alignment:
Q  227 aaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaag 325  Q
    ||||||||||||||||||||||||||||| |  |||| || ||  |||||| | ||||||| |||||||  | ||||||| || || | ||||||||||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  326 tatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
     ||||||| |||||||||| ||  ||| | |||| |||||||| ||| |||||||| |||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagac 36270366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  227 aaaataataaagtccctagaatagttagtctgtttaa-tggaaca-ttaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 324  Q
    ||||||||||||||  |||||| ||||||  |||||| ||||| | |||||| |  |||||| ||||||| || ||||||| ||||| | ||||||||||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  325 gtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgt 385  Q
      ||  ||| |||||||||| |   ||||| ||||||||||||||| ||||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 384
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  229 aataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagta 327  Q
    ||||||||||||| | ||||||||| |  |||||| ||||| ||||| | | |||||||||  |||   | ||||||| || || ||||||||||||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  328 tccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatg 384  Q
    |||||| ||||| || | || |||||| |||| |||||||||||||||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 386
Target Start/End: Complemental strand, 24471792 - 24471642
Alignment:
Q  235 aaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaagtatccgtag 334  Q
    |||||||||| |||| |||||| ||||||| |  ||||| || | |||||||||||||||  | ||  ||||||| | ||||||||| |||||||| ||     
T  24471792 aaagtccctaaaatatttagtcggtttaatagc-cattatgtgtgacttaattgtgagacatcatttgacataagaacattattctttaagtatccatac 24471694  T
Q  335 tcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtg 386  Q
     ||| || ||||  |||||| |||| || ||||||||| |||||||||||||    
T  24471693 acaaactctattttaaagtgggataacactaaagcataaagactattatgtg 24471642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 21330549 - 21330503
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggct 21330503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 26269038 - 26269103
Alignment:
Q  26 tcgggcggcagatcaagcggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    ||||||||||||| | | |||||||| |||||| |||||  ||||||||||||||||||| |||||    
T  26269038 tcgggcggcagattatgaggtggtagtagatgacgaagatctgtacattattgaaaatctagatcc 26269103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 158; Significance: 6e-84; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 7138 - 6941
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  7138 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgagacc 7039  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |  ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  7038 ctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Complemental strand, 14154 - 13957
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  14154 aggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgagacc 14055  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  14054 ccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagac 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 7233 - 7189
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttgg 7189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 14249 - 14205
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttgg 143  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttgg 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 200 - 393
Target Start/End: Original strand, 7114 - 7307
Alignment:
Q  200 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccgt 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  7114 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgagaccccat 7213  T
Q  300 taaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  7214 taaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 7015 - 7061
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggct 7061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 196 - 393
Target Start/End: Original strand, 18291 - 18488
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  18291 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgagacc 18390  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    || ||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18391 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagac 18488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18196 - 18242
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggct 18242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 151; Significance: 9e-80; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 199 - 393
Target Start/End: Complemental strand, 26191 - 25997
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||     
T  26191 catttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgagacccca 26092  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||    
T  26091 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtagac 25997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 26286 - 26240
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| ||||||||||||| |||||||||||||| | ||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggct 26240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 199 - 393
Target Start/End: Original strand, 999 - 1193
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccg 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  999 catttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgagacccca 1098  T
Q  299 ttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcatatagactattatgtgggtagac 393  Q
    |||||||||| |||| |||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  1099 ttaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 901 - 947
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggct 947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 196 - 372
Target Start/End: Complemental strand, 230544 - 230369
Alignment:
Q  196 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  230544 aggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 230445  T
Q  296 ccgttaaacataaggaaattattcttaaagtatccgtagtcaagctttattgaaaagtgagatatcattaaagcata 372  Q
    || |||||||||||||||  |||||||||||||  ||||||||| |||||||| ||||| |||||||||||||||||    
T  230444 cc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcata 230369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 8504 - 8447
Alignment:
Q  199 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8504 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 8447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 8602 - 8567
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgat 8567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 26223 - 26176
Alignment:
Q  44 ggtggtagaagatgatgaagaattgtacattattgaaaatcttgatcc 91  Q
    |||| ||| |||||| ||||| ||||||||||||||||||||||||||    
T  26223 ggtgataggagatgaagaagatttgtacattattgaaaatcttgatcc 26176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 16523 - 16569
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggct 16569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 23825 - 23779
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgatggcgtttggct 145  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggct 23779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 37 - 2
Alignment:
Q  99 tgttggattaagccctaatagccaatctatattgat 134  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgat 2  T

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Target: scaffold0565 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  212 attttgttttgtttcaaaataataaagtccct 243  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 92194 - 92317
Alignment:
Q  222 gtttcaaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattct 320  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||  |  ||||||  | |  ||||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagacagcaataaacagcaaggcattattct 92293  T
Q  321 taaagtatccgtagtcaagcttta 344  Q
    ||||  || |||||||||||||||    
T  92294 taaaacattcgtagtcaagcttta 92317  T

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