View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17158_high_33 (Length: 298)

Name: NF17158_high_33
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17158_high_33
NF17158_high_33
[»] chr1 (46 HSPs)
chr1 (1-280)||(30026914-30027193)
chr1 (48-220)||(29570686-29570853)
chr1 (158-219)||(45682548-45682609)
chr1 (44-227)||(5586630-5586807)
chr1 (68-227)||(9877546-9877699)
chr1 (68-195)||(10296610-10296732)
chr1 (68-195)||(40934592-40934714)
chr1 (41-115)||(17191189-17191263)
chr1 (42-195)||(4695110-4695258)
chr1 (158-227)||(26095632-26095700)
chr1 (45-118)||(40770386-40770459)
chr1 (151-226)||(24234633-24234707)
chr1 (158-227)||(1501622-1501690)
chr1 (49-118)||(8853095-8853163)
chr1 (49-118)||(28554189-28554258)
chr1 (50-111)||(29570550-29570611)
chr1 (49-118)||(31289253-31289322)
chr1 (50-118)||(5618071-5618139)
chr1 (50-118)||(25012894-25012961)
chr1 (50-118)||(34480184-34480252)
chr1 (158-226)||(44344127-44344194)
chr1 (50-118)||(45286232-45286300)
chr1 (50-118)||(49021912-49021980)
chr1 (158-225)||(8641048-8641114)
chr1 (52-195)||(12649924-12650062)
chr1 (180-255)||(12752184-12752258)
chr1 (72-195)||(32694482-32694600)
chr1 (68-118)||(5618317-5618367)
chr1 (68-118)||(17504289-17504339)
chr1 (68-118)||(49021685-49021735)
chr1 (50-111)||(6488871-6488932)
chr1 (49-118)||(7349769-7349838)
chr1 (158-195)||(8828682-8828719)
chr1 (158-195)||(17504146-17504183)
chr1 (149-210)||(28552135-28552196)
chr1 (158-195)||(33471585-33471622)
chr1 (158-215)||(34704474-34704531)
chr1 (158-195)||(35521324-35521361)
chr1 (49-118)||(39672835-39672904)
chr1 (50-111)||(44344023-44344084)
chr1 (158-195)||(46283576-46283613)
chr1 (50-118)||(730799-730867)
chr1 (50-118)||(5586487-5586555)
chr1 (50-118)||(8853341-8853409)
chr1 (68-116)||(26095506-26095554)
chr1 (158-194)||(27065248-27065284)
[»] chr2 (40 HSPs)
chr2 (149-278)||(474648-474777)
chr2 (158-281)||(22399109-22399232)
chr2 (49-195)||(35412051-35412192)
chr2 (50-227)||(10714151-10714322)
chr2 (50-227)||(44490447-44490618)
chr2 (68-195)||(341330-341452)
chr2 (69-195)||(23926565-23926686)
chr2 (48-118)||(26499657-26499727)
chr2 (158-227)||(9912055-9912123)
chr2 (50-118)||(10192084-10192153)
chr2 (158-227)||(42950662-42950730)
chr2 (50-118)||(30488326-30488394)
chr2 (51-227)||(33274540-33274710)
chr2 (68-135)||(1650521-1650588)
chr2 (51-118)||(28789113-28789180)
chr2 (44-195)||(30488074-30488220)
chr2 (68-115)||(33274413-33274460)
chr2 (67-102)||(41537497-41537532)
chr2 (50-140)||(1479028-1479118)
chr2 (68-118)||(3888889-3888939)
chr2 (68-118)||(29154309-29154359)
chr2 (44-118)||(35411871-35411945)
chr2 (217-263)||(41537636-41537682)
chr2 (158-195)||(1270283-1270320)
chr2 (158-195)||(3322167-3322204)
chr2 (158-195)||(3888974-3889011)
chr2 (158-195)||(9027128-9027165)
chr2 (158-195)||(10192259-10192296)
chr2 (49-118)||(10714007-10714076)
chr2 (158-195)||(11724720-11724757)
chr2 (158-195)||(16350695-16350732)
chr2 (158-195)||(17549243-17549280)
chr2 (158-195)||(22196097-22196134)
chr2 (158-195)||(22486170-22486207)
chr2 (158-195)||(22899122-22899159)
chr2 (158-195)||(26499514-26499551)
chr2 (50-111)||(29154064-29154125)
chr2 (158-195)||(29175098-29175135)
chr2 (50-118)||(1650749-1650817)
chr2 (50-118)||(42950755-42950823)
[»] chr8 (30 HSPs)
chr8 (72-280)||(24566509-24566712)
chr8 (50-225)||(148293-148462)
chr8 (151-280)||(43497303-43497431)
chr8 (158-223)||(1802691-1802756)
chr8 (68-118)||(26938204-26938254)
chr8 (49-227)||(27712907-27713079)
chr8 (68-126)||(32063484-32063542)
chr8 (70-195)||(12649500-12649620)
chr8 (151-280)||(26187218-26187346)
chr8 (49-118)||(33278934-33279003)
chr8 (49-118)||(34199081-34199150)
chr8 (158-227)||(39198720-39198788)
chr8 (158-218)||(32478083-32478142)
chr8 (50-118)||(33279184-33279252)
chr8 (38-118)||(41617036-41617116)
chr8 (51-118)||(29596403-29596470)
chr8 (52-227)||(30253628-30253797)
chr8 (68-118)||(17494969-17495019)
chr8 (50-116)||(21660726-21660792)
chr8 (52-118)||(28828218-28828284)
chr8 (68-118)||(33526958-33527008)
chr8 (68-118)||(34632471-34632521)
chr8 (68-118)||(36556781-36556831)
chr8 (158-195)||(8156882-8156919)
chr8 (41-118)||(28828462-28828539)
chr8 (158-195)||(33279110-33279147)
chr8 (158-227)||(41617183-41617251)
chr8 (158-195)||(42684891-42684928)
chr8 (45-101)||(39198610-39198666)
chr8 (70-118)||(41617286-41617334)
[»] chr6 (36 HSPs)
chr6 (149-278)||(34493675-34493804)
chr6 (69-227)||(8129676-8129828)
chr6 (50-195)||(2316663-2316803)
chr6 (158-217)||(10384191-10384250)
chr6 (158-280)||(1368266-1368387)
chr6 (68-195)||(684971-685093)
chr6 (68-195)||(13853160-13853282)
chr6 (68-195)||(17853661-17853783)
chr6 (72-225)||(3105626-3105773)
chr6 (158-227)||(9546514-9546582)
chr6 (152-257)||(17312275-17312380)
chr6 (158-218)||(3012016-3012075)
chr6 (158-218)||(9515503-9515563)
chr6 (50-118)||(9899195-9899263)
chr6 (50-118)||(9899441-9899509)
chr6 (149-280)||(1375860-1375990)
chr6 (149-280)||(1383608-1383738)
chr6 (68-111)||(9546428-9546471)
chr6 (72-227)||(12240623-12240773)
chr6 (68-195)||(22568937-22569059)
chr6 (68-118)||(2882901-2882951)
chr6 (68-118)||(11362026-11362076)
chr6 (68-118)||(22568781-22568831)
chr6 (50-115)||(1925400-1925465)
chr6 (158-195)||(8487965-8488002)
chr6 (158-195)||(13178326-13178363)
chr6 (158-195)||(20027947-20027984)
chr6 (158-195)||(24325095-24325132)
chr6 (158-195)||(25026078-25026115)
chr6 (49-118)||(28852187-28852256)
chr6 (42-118)||(9220095-9220171)
chr6 (50-118)||(9546657-9546725)
chr6 (74-118)||(13853388-13853432)
chr6 (50-118)||(17853889-17853957)
chr6 (72-116)||(20028021-20028065)
chr6 (50-118)||(21926064-21926132)
[»] chr7 (53 HSPs)
chr7 (158-280)||(41316982-41317103)
chr7 (149-279)||(44533586-44533716)
chr7 (41-227)||(42391287-42391467)
chr7 (68-195)||(11338066-11338188)
chr7 (160-250)||(37900544-37900634)
chr7 (160-250)||(37907055-37907145)
chr7 (68-225)||(24331397-24331548)
chr7 (41-118)||(41922273-41922350)
chr7 (152-273)||(43268026-43268146)
chr7 (50-195)||(45055322-45055462)
chr7 (38-118)||(7172919-7172999)
chr7 (49-225)||(20121350-20121520)
chr7 (49-225)||(41857140-41857310)
chr7 (68-227)||(21733086-21733239)
chr7 (158-225)||(47221852-47221918)
chr7 (49-135)||(28588316-28588402)
chr7 (158-227)||(2699760-2699828)
chr7 (158-227)||(31283257-31283325)
chr7 (49-118)||(44458030-44458099)
chr7 (41-118)||(45055568-45055645)
chr7 (50-118)||(12423845-12423913)
chr7 (50-118)||(38495160-38495228)
chr7 (50-118)||(43575296-43575364)
chr7 (68-111)||(8522565-8522608)
chr7 (158-225)||(41749725-41749791)
chr7 (158-225)||(44457887-44457953)
chr7 (68-118)||(7149309-7149359)
chr7 (68-118)||(8805762-8805812)
chr7 (68-118)||(8805990-8806040)
chr7 (68-118)||(8949310-8949360)
chr7 (68-126)||(25436747-25436805)
chr7 (68-118)||(34287763-34287813)
chr7 (68-118)||(38494932-38494982)
chr7 (52-118)||(45062308-45062374)
chr7 (68-118)||(47221725-47221775)
chr7 (50-111)||(8522324-8522385)
chr7 (158-195)||(8805847-8805884)
chr7 (158-195)||(8949395-8949432)
chr7 (49-118)||(11337891-11337960)
chr7 (158-195)||(17173192-17173229)
chr7 (52-101)||(31115839-31115888)
chr7 (158-195)||(31813904-31813941)
chr7 (158-263)||(41054700-41054805)
chr7 (68-117)||(43575080-43575129)
chr7 (69-118)||(45867691-45867740)
chr7 (158-195)||(46738438-46738475)
chr7 (49-118)||(47221941-47222010)
chr7 (158-195)||(49114445-49114482)
chr7 (47-111)||(24331633-24331697)
chr7 (158-226)||(32064493-32064560)
chr7 (149-197)||(45533809-45533857)
chr7 (50-118)||(45867445-45867513)
chr7 (42-118)||(46426653-46426729)
[»] chr5 (34 HSPs)
chr5 (152-273)||(12875763-12875884)
chr5 (42-227)||(7601736-7601915)
chr5 (150-220)||(13675812-13675882)
chr5 (49-135)||(14871733-14871819)
chr5 (68-118)||(33381447-33381497)
chr5 (158-227)||(2467202-2467270)
chr5 (158-227)||(13577406-13577474)
chr5 (49-118)||(16737049-16737118)
chr5 (49-118)||(19131116-19131185)
chr5 (49-118)||(33429779-33429848)
chr5 (49-118)||(39589614-39589683)
chr5 (71-195)||(1099066-1099185)
chr5 (50-118)||(1643539-1643607)
chr5 (50-118)||(16736801-16736869)
chr5 (149-193)||(26349238-26349282)
chr5 (68-111)||(30129493-30129536)
chr5 (158-225)||(39589721-39589787)
chr5 (158-225)||(42610884-42610950)
chr5 (68-118)||(7601611-7601661)
chr5 (68-118)||(19130888-19130938)
chr5 (73-195)||(33429556-33429673)
chr5 (49-118)||(2426228-2426297)
chr5 (158-195)||(3279362-3279399)
chr5 (158-195)||(13697492-13697529)
chr5 (158-195)||(14871837-14871874)
chr5 (158-195)||(16736906-16736943)
chr5 (158-195)||(18707373-18707410)
chr5 (158-195)||(31618341-31618378)
chr5 (158-195)||(32772165-32772202)
chr5 (69-118)||(33381674-33381723)
chr5 (50-111)||(40952067-40952128)
chr5 (158-195)||(40952171-40952208)
chr5 (50-118)||(31485957-31486025)
chr5 (50-118)||(32771991-32772059)
[»] chr4 (41 HSPs)
chr4 (47-226)||(52538023-52538196)
chr4 (49-227)||(32922066-32922238)
chr4 (149-263)||(33815346-33815460)
chr4 (159-249)||(47122541-47122631)
chr4 (158-195)||(8358546-8358583)
chr4 (158-279)||(30534629-30534750)
chr4 (50-227)||(52654075-52654246)
chr4 (50-118)||(10993625-10993693)
chr4 (50-118)||(16530318-16530386)
chr4 (50-225)||(16019957-16020126)
chr4 (205-280)||(17040057-17040132)
chr4 (68-226)||(7067386-7067538)
chr4 (70-140)||(46648089-46648159)
chr4 (158-227)||(46689300-46689368)
chr4 (50-118)||(9902653-9902721)
chr4 (50-118)||(17040156-17040224)
chr4 (50-118)||(20984160-20984228)
chr4 (160-280)||(23962952-23963071)
chr4 (50-118)||(32922313-32922381)
chr4 (50-118)||(39791917-39791985)
chr4 (152-227)||(18635983-18636057)
chr4 (68-111)||(39792172-39792215)
chr4 (48-111)||(52653929-52653992)
chr4 (52-118)||(44551161-44551227)
chr4 (68-118)||(52537897-52537947)
chr4 (69-118)||(9902902-9902951)
chr4 (158-195)||(17362472-17362509)
chr4 (158-195)||(22539861-22539898)
chr4 (158-227)||(24270505-24270573)
chr4 (158-195)||(25331991-25332028)
chr4 (158-195)||(26842903-26842940)
chr4 (158-227)||(26886753-26886821)
chr4 (42-111)||(35130783-35130852)
chr4 (69-118)||(35131042-35131091)
chr4 (158-195)||(41935596-41935633)
chr4 (171-256)||(49860772-49860856)
chr4 (158-222)||(2272580-2272644)
chr4 (50-98)||(25331815-25331863)
chr4 (151-195)||(30637042-30637086)
chr4 (50-118)||(32488830-32488898)
chr4 (158-226)||(49387327-49387394)
[»] chr3 (40 HSPs)
chr3 (50-118)||(25061301-25061369)
chr3 (50-118)||(31574499-31574567)
chr3 (47-118)||(14463369-14463440)
chr3 (51-118)||(32809155-32809222)
chr3 (68-227)||(50710721-50710874)
chr3 (69-195)||(11221166-11221287)
chr3 (68-118)||(35415488-35415538)
chr3 (49-195)||(44664620-44664761)
chr3 (149-195)||(48738173-48738219)
chr3 (49-118)||(20209149-20209218)
chr3 (40-101)||(25061541-25061602)
chr3 (50-135)||(32809349-32809433)
chr3 (158-227)||(45214520-45214588)
chr3 (50-195)||(46292582-46292722)
chr3 (151-263)||(2397882-2397993)
chr3 (50-118)||(50711241-50711309)
chr3 (68-195)||(13997091-13997213)
chr3 (158-225)||(25061445-25061511)
chr3 (68-195)||(29434319-29434441)
chr3 (40-118)||(2862692-2862769)
chr3 (149-231)||(11471860-11471941)
chr3 (158-220)||(29560440-29560502)
chr3 (49-195)||(38675155-38675296)
chr3 (68-118)||(44920144-44920194)
chr3 (68-118)||(45171596-45171646)
chr3 (69-118)||(2579114-2579163)
chr3 (158-227)||(2773299-2773367)
chr3 (158-195)||(15543102-15543139)
chr3 (158-227)||(18168857-18168925)
chr3 (49-118)||(18169000-18169069)
chr3 (158-227)||(28843835-28843903)
chr3 (158-195)||(44920001-44920038)
chr3 (49-118)||(49002236-49002305)
chr3 (158-195)||(49002409-49002446)
chr3 (50-118)||(50710892-50710961)
chr3 (49-118)||(50711102-50711171)
chr3 (159-231)||(11839287-11839358)
chr3 (50-118)||(28843978-28844046)
chr3 (158-194)||(39778454-39778490)
chr3 (158-226)||(44036789-44036856)
[»] scaffold0009 (2 HSPs)
scaffold0009 (158-225)||(258900-258966)
scaffold0009 (69-118)||(258774-258823)
[»] scaffold0592 (1 HSPs)
scaffold0592 (158-195)||(8562-8599)
[»] scaffold0119 (1 HSPs)
scaffold0119 (158-195)||(41382-41419)
[»] scaffold0029 (1 HSPs)
scaffold0029 (50-195)||(73547-73687)
[»] scaffold0003 (1 HSPs)
scaffold0003 (158-195)||(323587-323624)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 30026914 - 30027193
Alignment:
Q  1 tgaggagcagcacagaatagtttgaccatattgaaatttttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggt 100  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  30026914 tgaggagcatcacaaaatagtttgaccatattgaaatttttaaaataatggcaaaattacacccgtggtcccttaacttaatttcagataacgatttggt 30027013  T
Q  101 ctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctg 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30027014 ctgttatctttatttcattccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttcaaatctaaaattcatatgcaaacatggctg 30027113  T
Q  201 aagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactccatatgcaaatg 280  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30027114 aagaaccatagatttgaagactgaaagctcatagagaaataaaaccatagatttgaagcttgatactccttatgcaaatg 30027193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 220
Target Start/End: Complemental strand, 29570853 - 29570686
Alignment:
Q  48 atggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat-gccattttgattcttttagtctgtttgc 146  Q
    |||| |||||||||| || ||||||| ||||| ||||||| |||| ||||||||   ||||||| |||||| || |||||| ||||||| |||  |||||    
T  29570853 atggaaaaattacacatgtggtccctaaactttatttcagataacaatttggtcctgtatctttttttcattgcaattttg-ttcttttggtccatttgc 29570755  T
Q  147 aatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaaga 220  Q
    |     |||  |||||||||||||||||| ||||||||||||||||||| | ||||  ||||||||||||||||    
T  29570754 a-----tatgtattttcaagcttcaaatcaaagattcatatgcaaacataggtgaaagaccatagatttgaaga 29570686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 45682548 - 45682609
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaag 219  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  45682548 attttcaagctttaaatataagattcatatgcaaacatggatgaaagaccatagatttgaag 45682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 5586807 - 5586630
Alignment:
Q  44 aataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtt 143  Q
    ||||| ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||    
T  5586807 aataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatt 5586708  T
Q  144 tgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
         | |||||  ||||||||||||||||| ||| |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  5586707 -----ttcatatacattttcaagcttcaaatttaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 5586630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 9877699 - 9877546
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||  |||  ||     | |||||  ||||||||||    
T  9877699 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttatgtccatt-----ttcatatacattttcaagc 9877605  T
Q  168 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  9877604 ttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 9877546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 10296610 - 10296732
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||  || ||||||  |||| |||  ||     | |||||  ||||||||||    
T  10296610 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttgatcatttttgtccatt-----ttcatatgcattttcaagc 10296704  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  10296705 ttcaaatctaatattcttatgcaaacat 10296732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 40934714 - 40934592
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | |||||  ||||||||||    
T  40934714 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttcatatacattttcaagc 40934620  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  40934619 ttcaaatctaatattcttatgcaaacat 40934592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 17191189 - 17191263
Alignment:
Q  41 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttattt 115  Q
    |||||| | ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  17191189 taaaattaaggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttattt 17191263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 4695258 - 4695110
Alignment:
Q  42 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctg 141  Q
    |||||| |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| ||||     
T  4695258 aaaatattggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcta 4695159  T
Q  142 tttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||     |  ||||  ||||||||| ||||||||||| |||| |||||||||||    
T  4695158 tt-----tttatatacattttcaagtttcaaatctaatattcttatgcaaacat 4695110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 26095700 - 26095632
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||||||||||    
T  26095700 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagactgaaag 26095632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 40770459 - 40770386
Alignment:
Q  45 ataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||| |||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  40770459 ataatggtaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 40770386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 24234633 - 24234707
Alignment:
Q  151 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
    ||||| |||||||||||||||||||| | |||| ||||||||||| | ||||| |||||| ||||||||| |||||    
T  24234633 catatggattttcaagcttcaaatcttatattcttatgcaaacatagatgaag-accataaatttgaagattgaaa 24234707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 1501622 - 1501690
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  ||| || |||||||||||||| ||||||    
T  1501622 attttcaagcttcaaatctaatattcttatgcaaacatagacgaa-aatcatagatttgaagattgaaag 1501690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 8853095 - 8853163
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  8853095 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtct-ttatctttttttcat 8853163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 28554189 - 28554258
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  28554189 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 28554258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 29570550 - 29570611
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    |||||||||||| ||| ||||| ||||||||||||||| ||| |||||||||  ||||||||    
T  29570550 ggcaaaattacatctgtggtcctttaacttaatttcagataatgatttggtcctttatcttt 29570611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 31289253 - 31289322
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  31289253 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 31289322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 5618071 - 5618139
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  5618071 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 5618139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 25012961 - 25012894
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  25012961 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtct-ttatctttttttcat 25012894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 34480184 - 34480252
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  34480184 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 34480252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 44344127 - 44344194
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
    ||||||||||||||||||| | |||| ||||||||||| |  |||| | ||||||||||||||||||||    
T  44344127 attttcaagcttcaaatcttatattcttatgcaaacatagacgaag-atcatagatttgaagactgaaa 44344194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 45286232 - 45286300
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||| ||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  45286232 ggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcctttatctttttttcat 45286300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 49021980 - 49021912
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  49021980 ggcaaaattacactttttgtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 49021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 8641048 - 8641114
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| |||| |||||| || || | | |||||||||||||||||||    
T  8641048 attttcaagcttcaaatctaatattcttatgaaaacatagccgatg-atcatagatttgaagactgaa 8641114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 12649924 - 12650062
Alignment:
Q  52 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgc 151  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |      
T  12649924 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttt 12650018  T
Q  152 atatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||  ||||||||||||||||||||| |||| |||||||||||    
T  12650019 atatacattttcaagcttcaaatctaatattcttatgcaaacat 12650062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 12752184 - 12752258
Alignment:
Q  180 attcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttg 255  Q
    |||||||||||||||| | ||||| |||||| ||| ||||||| | |||||| ||| |||||||||| ||||||||    
T  12752184 attcatatgcaaacatag-tgaaggaccataaattagaagactaagagctcatagaaaaataaaaccttagatttg 12752258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 32694600 - 32694482
Alignment:
Q  72 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 171  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  ||||||||||||||    
T  32694600 cttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagcttca 32694506  T
Q  172 aatctaagattcatatgcaaacat 195  Q
    ||||||| |||| |||||||||||    
T  32694505 aatctaatattcttatgcaaacat 32694482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 5618367 - 5618317
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  5618367 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 5618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 17504339 - 17504289
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  17504339 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 17504289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 49021685 - 49021735
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  49021685 gtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 49021735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 6488871 - 6488932
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  6488871 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatcttt 6488932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 7349769 - 7349838
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||| ||||  |||||||  |||||||| ||||||    
T  7349769 tggcaaaattacacttttagtcccttaacttaatttcagataacactttggtcctttatctttttttcat 7349838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 8828682 - 8828719
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8828682 attttcaagcttcaaatctaatattcttatgcaaacat 8828719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 17504146 - 17504183
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17504146 attttcaagcttcaaatctaatattcttatgcaaacat 17504183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 28552196 - 28552135
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccata 210  Q
    ||||||| |||||||||||  ||||||||| ||||||||| |||||||  ||||| ||||||    
T  28552196 tgcatatagattttcaagcagcaaatctaaaattcatatgaaaacatgattgaaggaccata 28552135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 33471622 - 33471585
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  33471622 attttcaagcttcaaatctaatattcttatgcaaacat 33471585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 34704474 - 34704531
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagattt 215  Q
    |||||||||  |||||||||| ||||||||| |||||||  |||||||||||| ||||    
T  34704474 attttcaagtatcaaatctaaaattcatatgaaaacatgaatgaagaaccatacattt 34704531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 35521324 - 35521361
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  35521324 attttcaagcttcaaatctaatattcttatgcaaacat 35521361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 39672835 - 39672904
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  ||| |||  |||||||| ||||||    
T  39672835 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcat 39672904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 44344023 - 44344084
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||| |   ||||||||||||||||||||||||| | ||||||  ||||||||    
T  44344023 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaaattggtcctttatcttt 44344084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 46283613 - 46283576
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  46283613 attttcaagcttcaaatctaatattcttatgcaaacat 46283576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 730799 - 730867
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||||||||| | || |||  |||||||| ||||||    
T  730799 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaacttagtcctttatctttttttcat 730867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 5586487 - 5586555
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |  ||||||||||||| |||| ||||||| |||| |||  |||||||| ||||||    
T  5586487 ggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcat 5586555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 8853409 - 8853341
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||| ||| ||||||    
T  8853409 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttttttcat 8853341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 26095506 - 26095554
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttc 116  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||    
T  26095506 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttc 26095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 27065248 - 27065284
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaaca 194  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  27065248 attttcaagcttcaaatctaatattcttatgcaaaca 27065284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 474777 - 474648
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 248  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||  ||||||||||||    
T  474777 tgcatatgaattttcaagcttcaaatttaagattcatatgcaaacatgggtgaaggaccatagatttgaagactgagaactcacaggaaaataaaaccat 474678  T
Q  249 agatttgaagcttgatactccatatgcaaa 278  Q
     |||||||||||||| | | ||||||||||    
T  474677 cgatttgaagcttgaaaattcatatgcaaa 474648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 22399109 - 22399232
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcac-agagaaataaaaccatagatttga 256  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||  |||||| |||| || ||||| || |||| ||| || |||||| ||| ||||||    
T  22399109 attttcaagcttcaaatctaagattcaaatgtaaacataggtgaaagaccataaattttaaaactgagaggtcactaga-aattaaaacaatatatttga 22399207  T
Q  257 agcttgatactccatatgcaaatgt 281  Q
    ||||||| | | |||||||||||||    
T  22399208 agcttgaaaattcatatgcaaatgt 22399232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 35412192 - 35412051
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  35412192 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 35412098  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    | |||||  ||||||||||||||||||||| |||| |||||||||||    
T  35412097 ttcatatacattttcaagcttcaaatctaatattcttatgcaaacat 35412051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 227
Target Start/End: Complemental strand, 10714322 - 10714151
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  10714322 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatt-----t 10714228  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
     |||||  ||||||||||||||||| ||| |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  10714227 tcatatacattttcaagcttcaaatttaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 10714151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 227
Target Start/End: Complemental strand, 44490618 - 44490447
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   |||||||||| ||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||      
T  44490618 ggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-- 44490521  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
       |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  44490520 ---tatatattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 44490447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 341330 - 341452
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | |||||  ||||||||||    
T  341330 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttcatatacattttcaagc 341424  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  341425 ttcaaatctaatattcttatgcaaacat 341452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 23926686 - 23926565
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagct 168  Q
    |||||||||||||||||||||||| ||||| ||| |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  |||||||||||    
T  23926686 tcccttaacttaatttcaggtaacaatttgatcttttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagct 23926592  T
Q  169 tcaaatctaagattcatatgcaaacat 195  Q
    |||||||||| |||| |||||||||||    
T  23926591 tcaaatctaatattcttatgcaaacat 23926565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 26499727 - 26499657
Alignment:
Q  48 atggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  26499727 atggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 26499657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 9912123 - 9912055
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| ||||||    
T  9912123 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaag 9912055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 10192084 - 10192153
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggt-ctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||| || |||||||| ||||||    
T  10192084 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtccttttatctttttttcat 10192153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 42950730 - 42950662
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  42950730 attttcaagcttcaaatctaatattcttatgcaaacatagaag-aggatcatagatttgaagactgaaag 42950662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 30488394 - 30488326
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  30488394 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 30488326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 227
Target Start/End: Complemental strand, 33274710 - 33274540
Alignment:
Q  51 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatg 150  Q
    |||||||||||| |   ||||||||||||||||| ||||||| ||||||||  |||||||  ||||||  || |||| |||||||  ||  ||     |     
T  33274710 gcaaaattacacttttagtcccttaacttaattttaggtaacaatttggtcctttatcttcttttcatttcaatttggttctttttatccatt-----tt 33274616  T
Q  151 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    |||||  ||||||||| ||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  33274615 catatacattttcaagtttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 33274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 1650521 - 1650588
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 135  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| |||||||    
T  1650521 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggttctttt 1650588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 28789180 - 28789113
Alignment:
Q  51 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  28789180 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 28789113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 195
Target Start/End: Original strand, 30488074 - 30488220
Alignment:
Q  44 aataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtt 143  Q
    ||||| ||||||||||||| |    |||||||||||||||||||||||| ||||| ||  |||||||| ||||||  || |||| | ||||| |||  ||    
T  30488074 aataaaggcaaaattacacttttaatcccttaacttaatttcaggtaacaatttgatcatttatctttttttcatttcaatttggtcctttttgtccatt 30488173  T
Q  144 tgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
         |  ||||  ||||||||||||||||||||| |||| |||||||||||    
T  30488174 -----tttatatacattttcaagcttcaaatctaatattcttatgcaaacat 30488220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 33274413 - 33274460
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttattt 115  Q
    |||||||||||||||||||||||||  ||| |||| ||||||||||||    
T  33274413 gtcccttaacttaatttcaggtaacagtttagtcttttatctttattt 33274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 41537497 - 41537532
Alignment:
Q  67 ggtcccttaacttaatttcaggtaacgatttggtct 102  Q
    |||||||||||||||||||||||||| |||||||||    
T  41537497 ggtcccttaacttaatttcaggtaacaatttggtct 41537532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 1479028 - 1479118
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtct 140  Q
    ||||||||||||| |   || |||||||||||||||||||||  ||||||||  |||||||| ||||||  || |||||| ||||| ||||    
T  1479028 ggcaaaattacacttttagttccttaacttaatttcaggtaataatttggtcatttatctttttttcatttcaatttgatactttttgtct 1479118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 3888889 - 3888939
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||| ||| |||||||| ||||||    
T  3888889 gtcccttaacttaatttcaggtaacagtttgatcttttatctttttttcat 3888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 29154359 - 29154309
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||| |||||||  |||||||| |||||||| ||||||    
T  29154359 gtcccttaacttaattttaggtaacagtttggtcttttatctttttttcat 29154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 35411871 - 35411945
Alignment:
Q  44 aataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||| |||||||||||||| |   |||||||||||||||||| ||||||  |||||||  |||||||| ||||||    
T  35411871 aatattggcaaaattacacttttagtcccttaacttaatttctggtaactgtttggtcctttatctttttttcat 35411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 41537636 - 41537682
Alignment:
Q  217 aagactgaaagctcacagagaaataaaaccatagatttgaagcttga 263  Q
    |||||||| ||||||| | |||| |||||||||||||||||||||||    
T  41537636 aagactgagagctcactgcgaaagaaaaccatagatttgaagcttga 41537682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 1270320 - 1270283
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  1270320 attttcaagcttcaaatctaatattcttatgcaaacat 1270283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 3322204 - 3322167
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  3322204 attttcaagcttcaaatctaatattcttatgcaaacat 3322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 3888974 - 3889011
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  3888974 attttcaagcttcaaatctaatattcttatgcaaacat 3889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 9027128 - 9027165
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  9027128 attttcaagcttcaaatctaatattcttatgcaaacat 9027165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 10192296 - 10192259
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  10192296 attttcaagcttcaaatctaatattcttatgcaaacat 10192259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 10714007 - 10714076
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |  ||||||||||||| |||| ||||||| |||| |||  |||||||| ||||||    
T  10714007 tggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcat 10714076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 11724720 - 11724757
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  11724720 attttcaagcttcaaatctaatattcttatgcaaacat 11724757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 16350695 - 16350732
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  16350695 attttcaagcttcaaatctaatattcttatgcaaacat 16350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 17549280 - 17549243
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17549280 attttcaagcttcaaatctaatattcttatgcaaacat 17549243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 22196134 - 22196097
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22196134 attttcaagcttcaaatctaatattcttatgcaaacat 22196097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 22486207 - 22486170
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22486207 attttcaagcttcaaatctaatattcttatgcaaacat 22486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 22899122 - 22899159
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22899122 attttcaagcttcaaatctaatattcttatgcaaacat 22899159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 26499514 - 26499551
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  26499514 attttcaagcttcaaatctaatattcttatgcaaacat 26499551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 29154064 - 29154125
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||| |   |||||||||||||||||||| |||| ||||||||  ||||||||    
T  29154064 ggcaaaattacacttttagtcccttaacttaatttcagttaacaatttggtcctttatcttt 29154125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 29175135 - 29175098
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  29175135 attttcaagcttcaaatctaatattcttatgcaaacat 29175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 1650817 - 1650749
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  ||| |||  |||||||| ||||||    
T  1650817 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagttttgtcctttatctttttttcat 1650749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 42950823 - 42950755
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||| |||||||||||||||  |||||||  |||||||| ||||||    
T  42950823 ggcaaaattacacttttagtcccttaatttaatttcaggtaacagtttggtcatttatctttttttcat 42950755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 72 - 280
Target Start/End: Complemental strand, 24566712 - 24566509
Alignment:
Q  72 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 171  Q
    |||||||| |||||||||||||||||   || |||||||| | | | | ||||||| | ||||| ||| |||||||     ||| ||| |||||| ||||    
T  24566712 cttaacttgatttcaggtaacgattttaccttttatctttctcttacgtcattttggtccttttggtccgtttgca-----tatggatgttcaagtttca 24566618  T
Q  172 aatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactccat 271  Q
    ||||||| |||||||| ||||||||||||||| |||||| |||||||| |||| |||||||||  |||||||| ||||||||| |||||| | | |||||    
T  24566617 aatctaatattcatatacaaacatggctgaaggaccataaatttgaaggctgagagctcacaggaaaataaaatcatagatttaaagcttaaaaatccat 24566518  T
Q  272 atgcaaatg 280  Q
    |||||||||    
T  24566517 atgcaaatg 24566509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 225
Target Start/End: Original strand, 148293 - 148462
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |  |||||||||||||||||| ||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  148293 ggcaaaattacacttttggtcccttaacttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----t 148387  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
     |||||  ||||||||||||||||| ||| |||| ||||||||||| | || || | |||||||||||||||||||    
T  148388 tcatatacattttcaagcttcaaatttaatattcttatgcaaacatagatg-aggatcatagatttgaagactgaa 148462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 43497303 - 43497431
Alignment:
Q  151 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 250  Q
    ||||| |||||||||||||||||| | | |||| ||||||||||| | ||||| |||||| ||||||||| |||||   || | | ||||||||||||      
T  43497303 catatagattttcaagcttcaaatatgatattcttatgcaaacatagatgaag-accataaatttgaagattgaaatgccataaaaaaataaaaccatga 43497401  T
Q  251 atttgaagcttgatactccatatgcaaatg 280  Q
    ||||||||||||| | | ||||||||||||    
T  43497402 atttgaagcttgaaaattcatatgcaaatg 43497431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 1802691 - 1802756
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactg 223  Q
    ||||||||| ||||||| ||||||||||||| ||||||   |||| ||||||||||||||||||||    
T  1802691 attttcaagtttcaaatttaagattcatatgtaaacataagtgaaaaaccatagatttgaagactg 1802756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 26938204 - 26938254
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  26938204 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 26938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 27713079 - 27712907
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  27713079 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 27712985  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    | |||||  |||||||||||||||||  || |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  27712984 ttcatatacattttcaagcttcaaattaaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 27712907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 32063484 - 32063542
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccatttt 126  Q
    |||||||||||||||||||| ||||||||| |||| |||||||| ||| ||| ||||||    
T  32063484 gtcccttaacttaatttcagataacgatttcgtcttttatctttgtttaatgtcatttt 32063542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 12649500 - 12649620
Alignment:
Q  70 cccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagctt 169  Q
    |||||||||| |||| ||||||| ||||||||| |||||||| ||||||   | |||  | ||||| |||| ||| ||     ||| |||||||||||||    
T  12649500 cccttaactttattttaggtaacaatttggtcttttatctttttttcatttaaattttttccttttggtctattttca-----tatggattttcaagctt 12649594  T
Q  170 caaatctaagattcatatgcaaacat 195  Q
    ||||||||| |||| |||||||||||    
T  12649595 caaatctaatattcttatgcaaacat 12649620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 280
Target Start/End: Complemental strand, 26187346 - 26187218
Alignment:
Q  151 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 250  Q
    ||||| |||||||||||||||  | ||| |||| ||||||||||| |  |||| |||||||||||||||| || |||  || | | ||||||||||||      
T  26187346 catatggattttcaagcttcatttttaatattcttatgcaaacatagaagaag-accatagatttgaagattggaaggccataaaaaaataaaaccatga 26187248  T
Q  251 atttgaagcttgatactccatatgcaaatg 280  Q
    ||||||||||||| | | |||||| |||||    
T  26187247 atttgaagcttgaaaattcatatgtaaatg 26187218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 33278934 - 33279003
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   ||| ||||||||||||||||||||| ||||||||| ||| |||| ||||||    
T  33278934 tggcaaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcttttacctttttttcat 33279003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 34199150 - 34199081
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| | | ||||||||||||||||| |||||||  |||||||  |||||||| ||||||    
T  34199150 tggcaaaattacactttcagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcat 34199081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 39198720 - 39198788
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  39198720 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 39198788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 32478083 - 32478142
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaa 218  Q
    ||||| || |||||| |||||||||||||||||||||| | |||| |||||||||||||||    
T  32478083 attttaaaacttcaattctaagattcatatgcaaacatag-tgaaaaaccatagatttgaa 32478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 33279252 - 33279184
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  33279252 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 33279184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 41617036 - 41617116
Alignment:
Q  38 ttttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||| |   ||| |||||||||||||||| ||||  ||||||   |||||||| ||||||    
T  41617036 ttttaaaataatggcaaaattacacttttagtctcttaacttaatttcagataacagtttggttctttatctttttttcat 41617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 29596403 - 29596470
Alignment:
Q  51 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  29596403 gcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 29596470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 227
Target Start/End: Original strand, 30253628 - 30253797
Alignment:
Q  52 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgc 151  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | |    
T  30253628 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccatt-----ttc 30253722  T
Q  152 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||  |||||||||||||||||  || |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  30253723 atatacattttcaagcttcaaattaaatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 30253797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 17495019 - 17494969
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  17495019 gtcccttaacttaatttcaggtaacattttggtcatttatctttttttcat 17494969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 21660726 - 21660792
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttc 116  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||    
T  21660726 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttc 21660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 28828218 - 28828284
Alignment:
Q  52 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||| |   ||||||||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  28828218 caaaattacacttttagtcccttaacttaatttcaagtaacaatttggtcctttatctttttttcat 28828284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 33526958 - 33527008
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||| ||||  |||||||| |||||||| ||||||    
T  33526958 gtcccttaacttaatttcagataacagtttggtcttttatctttttttcat 33527008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 34632521 - 34632471
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  34632521 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 34632471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 36556831 - 36556781
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  36556831 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 36556781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 8156919 - 8156882
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8156919 attttcaagcttcaaatctaatattcttatgcaaacat 8156882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 28828539 - 28828462
Alignment:
Q  41 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||| |   |||||||||||| |||| ||||||  |||| |||  |||||||| ||||||    
T  28828539 taaaataatggcaaaattacacttttagtcccttaactttattttaggtaataatttagtcctttatctttttttcat 28828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 33279147 - 33279110
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  33279147 attttcaagcttcaaatctaatattcttatgcaaacat 33279110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 41617251 - 41617183
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||| ||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| ||||||    
T  41617251 attttcaagtttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaag 41617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 42684891 - 42684928
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  42684891 attttcaagcttcaaatctaatattcttatgcaaacat 42684928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 39198610 - 39198666
Alignment:
Q  45 ataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtc 101  Q
    |||| ||||||||||||| |   |||||||||||||||||||||||||  |||||||    
T  39198610 ataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtc 39198666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 41617334 - 41617286
Alignment:
Q  70 cccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  41617334 cccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 41617286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 34493804 - 34493675
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 248  Q
    |||||||  |||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||||||||| || || || ||||||||| |||||||||| ||    
T  34493804 tgcatatgaattttcaaacttcacatcaaagattcatatgcaatcatggatgaagaaccatagatttaaataccgacagctcacagggaaataaaactat 34493705  T
Q  249 agatttgaagcttgatactccatatgcaaa 278  Q
    ||||||||||||||| | ||||||| ||||    
T  34493704 agatttgaagcttgaaaatccatattcaaa 34493675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 227
Target Start/End: Complemental strand, 8129828 - 8129676
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagct 168  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  |||||||||||    
T  8129828 tcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagct 8129734  T
Q  169 tcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    |||||||||| |||| ||||||||||| |  | |||| |||||||||||||||||||||    
T  8129733 tcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagactgaaag 8129676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 2316803 - 2316663
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||     |    
T  2316803 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccttt-----t 2316709  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
     |||||  ||||||||||||||||||||| |||| |||||||||||    
T  2316708 tcatatacattttcaagcttcaaatctaatattcttatgcaaacat 2316663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 10384191 - 10384250
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttga 217  Q
    ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  10384191 attttcaagtttcaaatctaatattcatatgaaaacatgggtgaagaaccatacatttga 10384250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 1368266 - 1368387
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 257  Q
    |||||||||||| ||||||||||||||| |  |||||||  ||||  | |||||||||||||| ||  || |||||   |||||||| ||||||||| ||    
T  1368266 attttcaagctttaaatctaagattcatgtcaaaacatgaatgaaagaacatagatttgaagattgtgaggtcacaagaaaataaaatcatagatttaaa 1368365  T
Q  258 gcttgatactccatatgcaaatg 280  Q
    |||||| | ||||||||||||||    
T  1368366 gcttga-aatccatatgcaaatg 1368387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 684971 - 685093
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||| |||| ||||||||  |||||||| ||||||  || |||| ||||||| |||  ||     |  ||||  ||||||||||    
T  684971 gtcccttaacttaatttcagataacaatttggtcctttatctttttttcatttcaatttggttctttttgtccatt-----tttatatacattttcaagc 685065  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  685066 ttcaaatctaatattcttatgcaaacat 685093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 13853160 - 13853282
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  ||||||||||    
T  13853160 gtcccttaacttaatttcaggtaacaatttggtcatttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagc 13853254  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  13853255 ttcaaatctaatattcttatgcaaacat 13853282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 17853661 - 17853783
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||| |||||||||||||||  |||||||| |||||||| ||||||  || |||| | ||||| |||  |||  |     |||  ||||||||||    
T  17853661 gtcccttaaattaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccattttta-----tatacattttcaagc 17853755  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| ||||||||||||||||    
T  17853756 ttcaaatctaatattcatatgcaaacat 17853783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 3105626 - 3105773
Alignment:
Q  72 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 171  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  ||||||||||||||    
T  3105626 cttaacttaatttcaggtaactgtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagcttca 3105720  T
Q  172 aatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  3105721 aatctaacattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 3105773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 9546514 - 9546582
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| ||||||    
T  9546514 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaag 9546582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 17312275 - 17312380
Alignment:
Q  152 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccataga 251  Q
    |||| ||||||||||| |  ||| ||| | ||||||| |||||||  |||||||||||||||||||| | | | |||||| |  |||||||||||| |||    
T  17312275 atatggattttcaagcattgaatataaaactcatatgaaaacatgagtgaagaaccatagatttgaacattaagagctcaaattgaaataaaaccaaaga 17312374  T
Q  252 tttgaa 257  Q
    ||||||    
T  17312375 tttgaa 17312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 3012016 - 3012075
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaa 218  Q
    ||||||||||||||||||||| |||| ||||||||||| | ||||| | ||||||||||||    
T  3012016 attttcaagcttcaaatctaatattcttatgcaaacatagatgaag-atcatagatttgaa 3012075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 9515563 - 9515503
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaa 218  Q
    |||||||||| |||||||||| ||||||||| |||||||  ||||| || |||||||||||    
T  9515563 attttcaagcatcaaatctaaaattcatatgaaaacatgagtgaaggacaatagatttgaa 9515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 9899195 - 9899263
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9899195 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9899263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 9899509 - 9899441
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9899509 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9899441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 1375860 - 1375990
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 248  Q
    |||||||  ||||||||| || ||||||||| |||||| |||||||||  ||||  | |||||||||||||| ||| || |||||   || |||| ||||    
T  1375860 tgcatatgtattttcaagttttaaatctaaggttcataggcaaacatgaatgaaagaacatagatttgaagattgagaggtcacatgaaagtaaagccat 1375959  T
Q  249 agatttgaagcttgatactccatatgcaaatg 280  Q
    |||| | |||||||| | ||| ||||||||||    
T  1375960 agatgtaaagcttga-aatccgtatgcaaatg 1375990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 1383608 - 1383738
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 248  Q
    |||||||  ||||||||| || ||||||||| |||||| |||||||||  ||||  | |||||||||||||| ||| || |||||   || |||| ||||    
T  1383608 tgcatatgtattttcaagttttaaatctaaggttcataggcaaacatgaatgaaagaacatagatttgaagattgagaggtcacatgaaagtaaagccat 1383707  T
Q  249 agatttgaagcttgatactccatatgcaaatg 280  Q
    |||| | |||||||| | ||| ||||||||||    
T  1383708 agatgtaaagcttga-aatccgtatgcaaatg 1383738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 9546428 - 9546471
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    |||||||||||||||||||||||||  |||||||| ||||||||    
T  9546428 gtcccttaacttaatttcaggtaacagtttggtcttttatcttt 9546471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 12240773 - 12240623
Alignment:
Q  72 cttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttca 171  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||  || ||||||  |||| |||  ||| ||     |||  ||||||| ||||||    
T  12240773 cttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtccattttca-----tatacattttcatgcttca 12240679  T
Q  172 aatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||| |||| |||| |||||| |  || ||  |||||||||||||||||||||    
T  12240678 aatctaatattcttatgtaaacatagacgaggattcatagatttgaagactgaaag 12240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 22569059 - 22568937
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||||||||||| |||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| ||     |||  ||||||||||    
T  22569059 gtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttca-----tatacattttcaagc 22568965  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  22568964 ttcaaatctaatattcttatgcaaacat 22568937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 2882901 - 2882951
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  2882901 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 2882951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 11362076 - 11362026
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||| |||| ||||||||  |||||||| ||||||    
T  11362076 gtcccttaacttaatttcagataacaatttggtcctttatctttttttcat 11362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 22568781 - 22568831
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  22568781 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 22568831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 1925465 - 1925400
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttattt 115  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||| |||||||    
T  1925465 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttattt 1925400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 8487965 - 8488002
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8487965 attttcaagcttcaaatctaatattcttatgcaaacat 8488002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 13178326 - 13178363
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  13178326 attttcaagcttcaaatctaatattcttatgcaaacat 13178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 20027984 - 20027947
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  20027984 attttcaagcttcaaatctaatattcttatgcaaacat 20027947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 24325095 - 24325132
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  24325095 attttcaagcttcaaatctaatattcttatgcaaacat 24325132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 25026078 - 25026115
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  25026078 attttcaagcttcaaatctaatatttatatgcaaacat 25026115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 28852187 - 28852256
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   ||||||||||||||||| |||||||  |||||||  |||||||| ||||||    
T  28852187 tggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcat 28852256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 9220095 - 9220171
Alignment:
Q  42 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||| |||| ||||||||||| |   |||||||||||||||||||||||||  |||| ||  |||||||| ||||||    
T  9220095 aaaagaatgacaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcat 9220171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 9546725 - 9546657
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||| ||  |||||||| ||||||    
T  9546725 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcat 9546657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 13853432 - 13853388
Alignment:
Q  74 taacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||  |||||||| |||||||| ||||||    
T  13853432 taacttaatttcaggtaacagtttggtcttttatctttttttcat 13853388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 17853957 - 17853889
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||| ||||  |||||||  |||||||| ||||||    
T  17853957 ggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcctttatctttttttcat 17853889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 20028065 - 20028021
Alignment:
Q  72 cttaacttaatttcaggtaacgatttggtctgttatctttatttc 116  Q
    |||||||||||||||||||||  |||||||| |||||||| ||||    
T  20028065 cttaacttaatttcaggtaacagtttggtcttttatctttttttc 20028021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 21926064 - 21926132
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||| ||| ||||||    
T  21926064 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatatttttttcat 21926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 41317103 - 41316982
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 257  Q
    |||||||||||| |||||||| ||||||| |||||||||  ||||  |||||||||||||||| ||  || |||||   |||||||||||||||||||||    
T  41317103 attttcaagctttaaatctaaaattcataggcaaacatgaatgaaagaccatagatttgaagattgggaggtcacaagaaaataaaaccatagatttgaa 41317004  T
Q  258 gcttgatactccatatgcaaatg 280  Q
    |||||| | ||||||||||||||    
T  41317003 gcttga-aatccatatgcaaatg 41316982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 279
Target Start/End: Complemental strand, 44533716 - 44533586
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 248  Q
    ||||||| ||||||||||| |||||| ||| ||||||||| |||||||  ||||| || | ||||||||| ||| | |||||| |  |||||||||||||    
T  44533716 tgcatatggattttcaagcatcaaatttaaaattcatatgaaaacatgagtgaaggacaaaagatttgaacactaagagctcatatcgaaataaaaccat 44533617  T
Q  249 agatttgaagcttgatactccatatgcaaat 279  Q
    ||||||||| ||||| | |||||||||||||    
T  44533616 agatttgaatcttgaaaatccatatgcaaat 44533586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 227
Target Start/End: Original strand, 42391287 - 42391467
Alignment:
Q  41 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtct 140  Q
    |||| ||||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||     
T  42391287 taaattaatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcc 42391386  T
Q  141 gtttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
     ||     | ||||   ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  42391387 att-----ttcatacacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 42391467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 11338188 - 11338066
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||||| ||||| |||  ||     | ||| |  ||||||||||    
T  11338188 gtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtccatt-----ttcatgtacattttcaagc 11338094  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  11338093 ttcaaatctaatattcttatgcaaacat 11338066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 37900544 - 37900634
Alignment:
Q  160 tttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 250  Q
    |||||| |||||||||||| ||| |||||||||||||| | | | | |||||||||||||||  |||||||||| ||||| | ||||||||    
T  37900544 tttcaaacttcaaatctaatatttatatgcaaacatggataatggatcatagatttgaagaccaaaagctcacaaagaaacagaaccatag 37900634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 37907055 - 37907145
Alignment:
Q  160 tttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 250  Q
    |||||| |||||||||||| ||| |||||||||||||| | | | | |||||||||||||||  |||||||||| ||||| | ||||||||    
T  37907055 tttcaaacttcaaatctaatatttatatgcaaacatggataatggatcatagatttgaagaccaaaagctcacaaagaaacagaaccatag 37907145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 24331397 - 24331548
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || ||||||  |||| |||  ||     | |||||  ||||||||||    
T  24331397 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtccatt-----ttcatatacattttcaagc 24331491  T
Q  168 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  24331492 ttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 24331548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 41922273 - 41922350
Alignment:
Q  41 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||| ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  41922273 taaaataaaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 41922350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 43268146 - 43268026
Alignment:
Q  152 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccataga 251  Q
    |||||||||||||||||| |||||||| |||| |||||||| || | ||||| | |||||||||||||| |||||   || |   ||||||||||||| |    
T  43268146 atatcgattttcaagctttaaatctaatattcttatgcaaatatagttgaag-atcatagatttgaagattgaaatgccataagaaaataaaaccataaa 43268048  T
Q  252 tttgaagcttgatactccatat 273  Q
    ||| |||||||| | |||||||    
T  43268047 tttaaagcttgaaaatccatat 43268026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 45055322 - 45055462
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  45055322 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----t 45055416  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
      ||||  ||||||||||||||||||||| |||| |||||||||||    
T  45055417 ttatatacattttcaagcttcaaatctaatattcttatgcaaacat 45055462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 7172919 - 7172999
Alignment:
Q  38 ttttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||| ||||||||||||| |  ||||||||||||| |||| ||||||| |||| |||  |||||||| ||||||    
T  7172919 ttttaaaataaaggcaaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcat 7172999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 225
Target Start/End: Complemental strand, 20121520 - 20121350
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   |||| |||||||||||||| |||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||| ||     
T  20121520 tggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttca- 20121422  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
        |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  20121421 ----tatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 20121350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 225
Target Start/End: Original strand, 41857140 - 41857310
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   |||| |||||||||||||| |||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||| ||     
T  41857140 tggcaaaattacacttttagtcctttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccattttca- 41857238  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
        |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  41857239 ----tatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 41857310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 21733086 - 21733239
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||  || |||| | ||||| |||  ||     | |||||  ||||||||||    
T  21733086 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcctttttgtccatt-----ttcatatacattttcaagc 21733180  T
Q  168 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    || |||| ||| |||| ||||||||||| |  | |||| |||| ||||||||||||||||    
T  21733181 ttaaaatataatattcttatgcaaacatagacg-agaatcatacatttgaagactgaaag 21733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 47221918 - 47221852
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||| ||||||| | ||||| | |||||||||||||||||||    
T  47221918 attttcaagcttcaaatctaatattcttatacaaacatagatgaag-atcatagatttgaagactgaa 47221852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 28588316 - 28588402
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 135  Q
    |||||||||||||| |   |||| ||||||||||||||||||||  |||||||| |||||||| ||||||  || |||||| |||||    
T  28588316 tggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttgatcctttt 28588402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 2699828 - 2699760
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  2699828 attttcaagcttcaaatctaatattcttatgcaaacatagaag-aggatcatagatttgaagactgaaag 2699760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 31283257 - 31283325
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||| ||||||||||| |||| ||||||||||| |  || ||| |||||||||||||||||||||    
T  31283257 attttcaagtttcaaatctaatattcttatgcaaacatagacgaggaa-catagatttgaagactgaaag 31283325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 44458099 - 44458030
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  44458099 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 44458030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 45055645 - 45055568
Alignment:
Q  41 taaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||  ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  45055645 taaaatataggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 45055568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 12423845 - 12423913
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  12423845 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 12423913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 38495228 - 38495160
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  38495228 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 38495160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 43575364 - 43575296
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  43575364 ggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatctttttttcat 43575296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 8522608 - 8522565
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  8522608 gtcccttaacttaatttcaggtaacaatttggtcctttatcttt 8522565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 41749791 - 41749725
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  41749791 attttcaagcttcaaatctaacattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 41749725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 44457887 - 44457953
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  44457887 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 44457953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 7149309 - 7149359
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  7149309 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 7149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 8805762 - 8805812
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  8805762 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 8805812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 8806040 - 8805990
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  8806040 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 8805990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 8949310 - 8949360
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  8949310 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 8949360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 25436747 - 25436805
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccatttt 126  Q
    |||||||| ||||||||||| ||||||||| |||| |||||||  ||||||| ||||||    
T  25436747 gtcccttagcttaatttcagataacgatttcgtcttttatcttcttttcatgtcatttt 25436805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 34287813 - 34287763
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  34287813 gtcccttaacttaatttcaggtaacactttggtcctttatctttttttcat 34287763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 38494932 - 38494982
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  38494932 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 38494982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 45062374 - 45062308
Alignment:
Q  52 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  45062374 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 45062308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 47221725 - 47221775
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  47221725 gtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 47221775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 8522324 - 8522385
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  8522324 ggcaaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatcttt 8522385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 8805847 - 8805884
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8805847 attttcaagcttcaaatctaatattcttatgcaaacat 8805884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 8949395 - 8949432
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8949395 attttcaagcttcaaatctaatattcttatgcaaacat 8949432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 11337891 - 11337960
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||| |||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  11337891 tggcaaaattacacttttagtcctttaacttaatttcatgtaacaatttggtcctttatctttttttcat 11337960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 17173192 - 17173229
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17173192 attttcaagcttcaaatctaatattcttatgcaaacat 17173229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 31115839 - 31115888
Alignment:
Q  52 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtc 101  Q
    ||||||||||| |   ||||||||||||||||||||||||| ||||||||    
T  31115839 caaaattacacttttagtcccttaacttaatttcaggtaacaatttggtc 31115888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 31813941 - 31813904
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  31813941 attttcaagcttcaaatctaatattcttatgcaaacat 31813904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 41054805 - 41054700
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 257  Q
    |||||| ||||| |||||||| |||| ||||||||||| | | || ||||| | |||| |||| ||||||  || |   ||||||||||||| |||||||    
T  41054805 attttcgagctttaaatctaatattcttatgcaaacattgataaaaaaccacaaatttaaagattgaaaggccataagaaaataaaaccataaatttgaa 41054706  T
Q  258 gcttga 263  Q
    ||||||    
T  41054705 gcttga 41054700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 43575080 - 43575129
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttca 117  Q
    |||||||||||||||||||||||||  |||||||  |||||||| |||||    
T  43575080 gtcccttaacttaatttcaggtaacagtttggtcatttatctttttttca 43575129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 45867740 - 45867691
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  45867740 tcccttaacttaatttcaggtaacagtttggtcatttatctttttttcat 45867691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 46738475 - 46738438
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  46738475 attttcaagcttcaaatctaatattcttatgcaaacat 46738438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 47222010 - 47221941
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   || ||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  47222010 tggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 47221941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 49114482 - 49114445
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  49114482 attttcaagcttcaaatctaacattcttatgcaaacat 49114445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 24331697 - 24331633
Alignment:
Q  47 aatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    |||||||||||||||| |   |||||||||||||||||||| |||  ||||||||  ||||||||    
T  24331697 aatggcaaaattacacttttagtcccttaacttaatttcagataataatttggtcctttatcttt 24331633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 32064493 - 32064560
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
    ||||||||||||| ||||||| |||| |||| |||||| | |||| ||||||| ||||||||| |||||    
T  32064493 attttcaagcttccaatctaatattcttatgtaaacatagatgaa-aaccataaatttgaagattgaaa 32064560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 45533857 - 45533809
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatgg 197  Q
    |||||||  ||||||||  ||||||| ||||||||||||||||||||||    
T  45533857 tgcatatgaattttcaaatttcaaatttaagattcatatgcaaacatgg 45533809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 45867445 - 45867513
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||| |||||  |||||||  |||||||| ||||||    
T  45867445 ggcaaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcat 45867513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 46426653 - 46426729
Alignment:
Q  42 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||| ||||||||||| |    ||| |||||||||||| ||||||| ||||||||  |||||||| ||||||    
T  46426653 aaaataatgacaaaattacacttttaatcctttaacttaattttaggtaacaatttggtcctttatctttttttcat 46426729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 12875884 - 12875763
Alignment:
Q  152 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctca-cagagaaataaaaccatag 250  Q
    |||| ||||||||||||| |||||||| |||| ||||||||||| | | || ||||||||||||||||| ||||||  || |||| |||||||||||||     
T  12875884 atatggattttcaagctttaaatctaatattcttatgcaaacatagataaaaaaccatagatttgaagattgaaaggccatcaga-aaataaaaccataa 12875786  T
Q  251 atttgaagcttgatactccatat 273  Q
    ||||||||||||| | |||||||    
T  12875785 atttgaagcttgaaaatccatat 12875763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 7601915 - 7601736
Alignment:
Q  42 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctg 141  Q
    ||||||||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||| ||  || |||| | ||||| |||      
T  7601915 aaaataatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttaatttcaatttggtcctttttgtcca 7601816  T
Q  142 tttgcaatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||     | |||||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  7601815 tt-----ttcatatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 7601736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 13675882 - 13675812
Alignment:
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaaga 220  Q
    |||||| | |||| |||||||||| ||||||||||||||||||||| | ||||| |||||| |||||||||    
T  13675882 gcatatggttttttaagcttcaaagctaagattcatatgcaaacataggtgaaggaccatatatttgaaga 13675812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 14871733 - 14871819
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 135  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| |||||||    
T  14871733 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggttctttt 14871819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 33381447 - 33381497
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  33381447 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcat 33381497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 2467270 - 2467202
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  2467270 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 2467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 13577474 - 13577406
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  |||| | |||||||||||||| ||||||    
T  13577474 attttcaagcttcaaatctaatattcttatgcaaacatagacgaag-atcatagatttgaagattgaaag 13577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 16737118 - 16737049
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   ||||||||||||||||||||||||  ||||||||  |||||||| ||||||    
T  16737118 tggcaaaattacacttttagtcccttaacttaatttcaggtaataatttggtcatttatctttttttcat 16737049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 19131185 - 19131116
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  19131185 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 19131116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 33429848 - 33429779
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  33429848 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 33429779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 39589614 - 39589683
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  39589614 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 39589683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 1099185 - 1099066
Alignment:
Q  71 ccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttc 170  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  |||||||||||||    
T  1099185 ccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagcttc 1099091  T
Q  171 aaatctaagattcatatgcaaacat 195  Q
    |||||||| |||| |||||||||||    
T  1099090 aaatctaatattcttatgcaaacat 1099066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 1643539 - 1643607
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  1643539 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 1643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 16736801 - 16736869
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  16736801 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 16736869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 26349238 - 26349282
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaac 193  Q
    ||||||| |||||||||||||||||||||| ||||||||| ||||    
T  26349238 tgcatatagattttcaagcttcaaatctaaaattcatatgaaaac 26349282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 30129493 - 30129536
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||    
T  30129493 gtcctttaacttaatttcaggtaacaatttggtcttttatcttt 30129536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 39589787 - 39589721
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  39589787 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 39589721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 42610884 - 42610950
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | ||||  ||||||||||||||||||    
T  42610884 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaattatagatttgaagactgaa 42610950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 7601611 - 7601661
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  7601611 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 7601661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 19130888 - 19130938
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  19130888 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 19130938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 33429556 - 33429673
Alignment:
Q  73 ttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagcttcaa 172  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  |||||||||||||||    
T  33429556 ttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagcttcaa 33429650  T
Q  173 atctaagattcatatgcaaacat 195  Q
    |||||| |||| |||||||||||    
T  33429651 atctaatattcttatgcaaacat 33429673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 2426228 - 2426297
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  ||| |||  |||||||| ||||||    
T  2426228 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcat 2426297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 3279399 - 3279362
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  3279399 attttcaagcttcaaatctaatattcttatgcaaacat 3279362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 13697529 - 13697492
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  13697529 attttcaagcttcaaatctaatattcttatgcaaacat 13697492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 14871837 - 14871874
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  14871837 attttcaagcttcaaatctaatattcttatgcaaacat 14871874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 16736906 - 16736943
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  16736906 attttcaagcttcaaatctaatattcttatgcaaacat 16736943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 18707373 - 18707410
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  18707373 attttcaagcttcaaatctaatattcttatgcaaacat 18707410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 31618378 - 31618341
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  31618378 attttcaagcttcaaatctaatattcttatgcaaacat 31618341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 32772202 - 32772165
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  32772202 attttcaagcttcaaatctaatattcttatgcaaacat 32772165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 33381723 - 33381674
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  33381723 tcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 33381674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 40952067 - 40952128
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  40952067 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt 40952128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 40952171 - 40952208
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  40952171 attttcaagcttcaaatctaatattcttatgcaaacat 40952208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 31485957 - 31486025
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||| |||||||||||||||||||||  |||||||  |||||||| ||||||    
T  31485957 ggcaaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcat 31486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 32771991 - 32772059
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||| ||||||||||||||||||||  |||||||  |||||||| ||||||    
T  32771991 ggcaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcat 32772059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 52538196 - 52538023
Alignment:
Q  47 aatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgc 146  Q
    |||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||       
T  52538196 aatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccatt--- 52538100  T
Q  147 aatgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
      | ||||   ||||||||||||||||||||| |||| ||||||||||| |  | || | ||||||||||||||||||||    
T  52538099 --ttcatacacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaa 52538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 227
Target Start/End: Original strand, 32922066 - 32922238
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||         
T  32922066 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttgatcctttttgtccatt----- 32922160  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    | ||||   ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  32922161 ttcatacacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 32922238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 33815346 - 33815460
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccat 248  Q
    |||||||  ||||||||| || |||||| |  ||||||||||||||||| | ||||| |||| |||||||||| || |  |||||| |||||||||| ||    
T  33815346 tgcatatgaattttcaagtttaaaatctcatgttcatatgcaaacatggataaagaatcataaatttgaagaccgacaagtcacagggaaataaaactat 33815445  T
Q  249 agatttgaagcttga 263  Q
    |||||| ||| ||||    
T  33815446 agattttaagtttga 33815460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 47122541 - 47122631
Alignment:
Q  159 ttttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccata 249  Q
    |||||||||||  |||||||||||||||||||||||| | ||||| || |||||||||| || ||| | |||| || ||||||||| ||||    
T  47122541 ttttcaagctttcaatctaagattcatatgcaaacatcggtgaaggactatagatttgacgagtgagaactcatagggaaataaaatcata 47122631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 8358583 - 8358546
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8358583 attttcaagcttcaaatctaagattcatatgcaaacat 8358546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 279
Target Start/End: Original strand, 30534629 - 30534750
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaa 257  Q
    |||||||||| |||||||||| ||| ||||| |||||||  ||||| || | ||||||||| ||  | |||||| |  ||||||||| ||||||||||||    
T  30534629 attttcaagcatcaaatctaaaatttatatgaaaacatgagtgaaggacaacagatttgaacacgaagagctcaaattgaaataaaatcatagatttgaa 30534728  T
Q  258 gcttgatactccatatgcaaat 279  Q
     ||| | | |||||||||||||    
T  30534729 tctttaaaatccatatgcaaat 30534750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 227
Target Start/End: Complemental strand, 52654246 - 52654075
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||| |||     
T  52654246 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcaa- 52654148  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
        ||  ||||||||||||||||||| | |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  52654147 ----atacattttcaagcttcaaatcttatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 52654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 10993625 - 10993693
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  10993625 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 10993693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 16530318 - 16530386
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  16530318 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttttttcat 16530386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 225
Target Start/End: Original strand, 16019957 - 16020126
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||| ||  |||||||| ||||||  || |||| | ||||| |||  ||| ||      
T  16019957 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttca-- 16020054  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
       |||  ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  16020055 ---tatacattttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 16020126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 17040057 - 17040132
Alignment:
Q  205 accatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagcttgatactccatatgcaaatg 280  Q
    |||||||||||||||| ||| || ||| |   |||||||| |||||||||||||||||| | ||||||||||||||    
T  17040057 accatagatttgaagaatgagaggtcataagaaaataaaatcatagatttgaagcttgaaaatccatatgcaaatg 17040132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 7067538 - 7067386
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||||||||  |||| ||  |||||||| ||||||  || |||||| ||||| |||  ||| ||     ||   ||||||||||    
T  7067538 gtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttgatcctttttgtccattttca-----tacacattttcaagc 7067444  T
Q  168 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
    ||||||||||| |||| ||||||||||| |  | || | ||||||||||||||||||||    
T  7067443 ttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaa 7067386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 46648089 - 46648159
Alignment:
Q  70 cccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtct 140  Q
    ||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||||| ||||| ||||    
T  46648089 cccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtct 46648159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 46689368 - 46689300
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||||    
T  46689368 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaaag 46689300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 9902653 - 9902721
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9902653 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9902721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 17040224 - 17040156
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||    ||||||||||||||||||||| |||| ||||||||  |||||||| ||||||    
T  17040224 ggcaaaattacactcatggtcccttaacttaatttcagttaacaatttggtcctttatctttttttcat 17040156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 20984228 - 20984160
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  20984228 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 20984160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 23962952 - 23963071
Alignment:
Q  160 tttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttgaagc 259  Q
    ||||||| |||| |||||| |||  ||||||||||| | |||| ||||||||||||||||| |||||  ||| |   ||||||||||||  ||||||||     
T  23962952 tttcaagtttcagatctaatattgttatgcaaacatagatgaa-aaccatagatttgaagattgaaatgtcataagaaaataaaaccatgaatttgaagt 23963050  T
Q  260 ttgatactccatatgcaaatg 280  Q
    |||| | | ||||||||||||    
T  23963051 ttgaaaattcatatgcaaatg 23963071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 32922381 - 32922313
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  32922381 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 32922313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 39791917 - 39791985
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||| |||||||||||||||||||| ||||||||  |||||||| ||||||    
T  39791917 ggcaaaattacacttttagtcctttaacttaatttcaggtaacaatttggtcctttatctttttttcat 39791985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 18636057 - 18635983
Alignment:
Q  152 atatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    |||| |||||||||| ||||||||||| |||| ||| ||||||| | ||||| ||||| |||||||||| ||||||    
T  18636057 atatggattttcaagtttcaaatctaatattcttatacaaacatagatgaag-accatggatttgaagattgaaag 18635983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 39792215 - 39792172
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  39792215 gtcccttaacttaatttcaggtaacaatttggtcctttatcttt 39792172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 52653929 - 52653992
Alignment:
Q  48 atggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||||||||||||| |   |||||||||||||||||||||||||  |||||||  ||||||||    
T  52653929 atggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttt 52653992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 44551227 - 44551161
Alignment:
Q  52 caaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  44551227 caaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 44551161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 52537897 - 52537947
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  52537897 gtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 52537947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 9902951 - 9902902
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  9902951 tcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 9902902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 17362509 - 17362472
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  17362509 attttcaagcttcaaatctaatattcttatgcaaacat 17362472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 22539898 - 22539861
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22539898 attttcaagcttcaaatctaatattcttatgcaaacat 22539861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 24270573 - 24270505
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||| ||||||| |||| ||||||||||| |  | |||| |||| ||||||||||||||||    
T  24270573 attttcaagcttcgaatctaatattcttatgcaaacatagaag-agaatcataaatttgaagactgaaag 24270505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 25332028 - 25331991
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  25332028 attttcaagcttcaaatctaatattcttatgcaaacat 25331991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 26842903 - 26842940
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  26842903 attttcaagcttcaaatctaatattcttatgcaaacat 26842940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 26886821 - 26886753
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| |||| |||||| | || || | |||||||||||||| ||||||    
T  26886821 attttcaagcttcaaatctaatattcttatgtaaacatagatg-aggatcatagatttgaagattgaaag 26886753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 35130783 - 35130852
Alignment:
Q  42 aaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatcttt 111  Q
    ||||| ||||||||||||||| |    ||||||||||||||||||||||||  |||||||  ||||||||    
T  35130783 aaaattatggcaaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttt 35130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 35131091 - 35131042
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  35131091 tcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 35131042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 41935596 - 41935633
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  41935596 attttcaagcttcaaatctaatattcttatgcaaacat 41935633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 49860856 - 49860772
Alignment:
Q  171 aaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatagatttga 256  Q
    |||||||| |||||||||||||||||  ||||  | |||| |||| |||| ||||| |||||| |||||| |||||||| ||||||    
T  49860856 aaatctaaaattcatatgcaaacatgagtgaatgatcata-atttaaagattgaaaactcacaaagaaatgaaaccatatatttga 49860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 2272580 - 2272644
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagact 222  Q
    |||||||||  |||||||||| | ||||||| ||||||  ||||| |||||||||||| ||||||    
T  2272580 attttcaagtatcaaatctaaaagtcatatgaaaacatcactgaaaaaccatagatttaaagact 2272644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 25331815 - 25331863
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttg 98  Q
    ||||||||||||| |   ||||||||||||||||||||||||| |||||    
T  25331815 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttg 25331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 30637042 - 30637086
Alignment:
Q  151 catatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||| |||||||||||||||||||||| |||| |||| ||||||    
T  30637042 catatggattttcaagcttcaaatctaatattcttatgtaaacat 30637086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 32488898 - 32488830
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||| |||||||||||||||||||   |||||||| |||||||| ||||||    
T  32488898 ggcaaaattacacgtttagtcctttaacttaatttcaggtaatagtttggtcttttatctttttttcat 32488830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 49387394 - 49387327
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
    |||||||| |||||||||||| |||  ||||||||||| |  | |||| ||||||||||||||||||||    
T  49387394 attttcaaacttcaaatctaatattgctatgcaaacatagacg-agaatcatagatttgaagactgaaa 49387327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 25061301 - 25061369
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |  |||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  25061301 ggcaaaattacacttttggtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 25061369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 31574567 - 31574499
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||||||||| ||||||||  |||||||| ||||||    
T  31574567 ggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcat 31574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 14463440 - 14463369
Alignment:
Q  47 aatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  14463440 aatggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 14463369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 32809155 - 32809222
Alignment:
Q  51 gcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||| |  |||||||||| ||||||||||||||| ||||||||  |||||||| ||||||    
T  32809155 gcaaaattacacttttggtcccttaatttaatttcaggtaacaatttggtcctttatctttttttcat 32809222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 50710721 - 50710874
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||  || |||| |  |||| |||  ||| |||     ||  ||||||||||    
T  50710721 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcttttttgtccattttcaa-----atacattttcaagc 50710815  T
Q  168 ttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||| | |||| ||||||||||| |   ||| | |||||||||||||||||||||    
T  50710816 ttcaaatcttatattcttatgcaaacatag-acaaggatcatagatttgaagactgaaag 50710874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 11221287 - 11221166
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagct 168  Q
    |||||||||||||||||||||||| ||||||||  |||||||| ||||||  || |||| | ||||| |||  ||     | | |||  |||||||||||    
T  11221287 tcccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----ttcgtatacattttcaagct 11221193  T
Q  169 tcaaatctaagattcatatgcaaacat 195  Q
    |||||||||| |||| |||||||||||    
T  11221192 tcaaatctaatattcttatgcaaacat 11221166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 35415538 - 35415488
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  35415538 gtcccttaacttaatttcaggtaacagtttggtcttttatctttttttcat 35415488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 195
Target Start/End: Original strand, 44664620 - 44664761
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   ||||||||||||||||||||||||| |||| |||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  44664620 tggcaaaattacacttttagtcccttaacttaatttcaggtaacaatttagtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 44664714  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    |  ||||  ||||||||||||||||||||| |||| |||||||||||    
T  44664715 tttatatacattttcaagcttcaaatctaatattcttatgcaaacat 44664761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 48738219 - 48738173
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  48738219 tgcatatagattttcaaacttcaaatctaatattcatatgcaaacat 48738173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 20209149 - 20209218
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  20209149 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 20209218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 25061602 - 25061541
Alignment:
Q  40 ttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtc 101  Q
    ||||||||| ||||||||||||| |  |||| |||||||||||||||||||||  |||||||    
T  25061602 ttaaaataaaggcaaaattacacttttggtctcttaacttaatttcaggtaacagtttggtc 25061541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 32809433 - 32809349
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattctttt 135  Q
    ||||||||||||| |  ||||| ||||||||||||||||||||  |||||||| |||||||| ||||||  || |||| |||||||    
T  32809433 ggcaaaattacacttttggtccattaacttaatttcaggtaacagtttggtct-ttatctttttttcatttcaatttggttctttt 32809349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 45214588 - 45214520
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | |||| |||||||||||||||| ||||    
T  45214588 attttcaagcttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagactcaaag 45214520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 46292582 - 46292722
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   || ||||||||||||||||||||||  |||||||  |||||||| ||||||  || |||||| ||||| |||  ||     |    
T  46292582 ggcaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttttgtccatt-----t 46292676  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
      ||||  ||||||||||||||||||||| |||| |||||||||||    
T  46292677 ttatatacattttcaagcttcaaatctaatattcttatgcaaacat 46292722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 263
Target Start/End: Original strand, 2397882 - 2397993
Alignment:
Q  151 catatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctcacagagaaataaaaccatag 250  Q
    ||||| ||||||||| |||||||||||| |||| |||| ||| || | ||||| |||||| ||||||||| |||||  ||| |   ||||||||||||      
T  2397882 catatggattttcaaacttcaaatctaatattcttatgtaaatatagatgaag-accataaatttgaagattgaaatgtcataagaaaataaaaccatga 2397980  T
Q  251 atttgaagcttga 263  Q
    |||||||||||||    
T  2397981 atttgaagcttga 2397993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 50711309 - 50711241
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  50711309 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcat 50711241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 13997213 - 13997091
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||| ||||||   | |||| | ||||| |||  ||     | |||||  ||||||||||    
T  13997213 gtcccttgacttaatttcaggtaacaatttggtcctttatctttttttcattttaatttggtcctttttgtcaatt-----ttcatatacattttcaagc 13997119  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  13997118 ttcaaatctaatattcttatgcaaacat 13997091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25061511 - 25061445
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  25061511 attttcaagcttcaaatctaatattcttatgcaaacatag-aggaggatcatagatttgaagactgaa 25061445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 29434319 - 29434441
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaatgcatatcgattttcaagc 167  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||| ||||||  || |||| | ||||| |||  ||     |  ||||  ||||||||||    
T  29434319 gtcccttaacttaatttcaggtaacaatttgatcctttatctttttttcatttcaatttggtcctttttgtccatt-----tttatatacattttcaagc 29434413  T
Q  168 ttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||| |||| |||||||||||    
T  29434414 ttcaaatctaatattcttatgcaaacat 29434441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 2862692 - 2862769
Alignment:
Q  40 ttaaaataatggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||| ||||||||||||| |   ||||||||||||||||| |||||||  |||||||  |||||||| ||||||    
T  2862692 ttaaaataa-ggcaaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcat 2862769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 11471860 - 11471941
Alignment:
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctca 231  Q
    |||||||  |||||||||| |||||||||| ||||||||| ||| |||  ||||| | |||||||||||| ||| ||||||||    
T  11471860 tgcatatgcattttcaagcatcaaatctaaaattcatatgaaaa-atgagtgaaggatcatagatttgaacactaaaagctca 11471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 29560440 - 29560502
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaaga 220  Q
    |||||||| |||||||  |||||||||||||||||||| | ||||  |||||| |||||||||    
T  29560440 attttcaatcttcaaagttaagattcatatgcaaacatagatgaaagaccatatatttgaaga 29560502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 38675296 - 38675155
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaa 148  Q
    |||||||||||||| |   |||||||||| ||||||||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||         
T  38675296 tggcaaaattacacttttagtcccttaacataatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt----- 38675202  T
Q  149 tgcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    | |||||  ||||||||||||||||||||| |||| ||| |||||||    
T  38675201 ttcatatacattttcaagcttcaaatctaatattcttatacaaacat 38675155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 44920194 - 44920144
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||| ||||||    
T  44920194 gtcccttaacttaatttcaggcaacaatttggtcctttatctttttttcat 44920144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 45171596 - 45171646
Alignment:
Q  68 gtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||||| |||||| ||||||||  |||||||| ||||||    
T  45171596 gtcccttaacttaatttcgggtaacaatttggtcctttatctttttttcat 45171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 2579114 - 2579163
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||||| | ||||||||||||||  |||||||| ||||||    
T  2579114 tcccttaacttaattttaagtaacgatttggtcctttatctttttttcat 2579163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 2773367 - 2773299
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||| | |||| ||||||||||| |  | |||| |||| ||||||||||||||||    
T  2773367 attttcaagcttcaaatcttatattcttatgcaaacatagacg-agaatcataaatttgaagactgaaag 2773299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 15543102 - 15543139
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  15543102 attttcaagcttcaaatctaatattcttatgcaaacat 15543139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 18168857 - 18168925
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    ||||||||||||||||||| | |||| ||||||||||| |  |||| | |||| ||||||||||||||||    
T  18168857 attttcaagcttcaaatcttatattcttatgcaaacatagacgaag-atcatatatttgaagactgaaag 18168925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 18169069 - 18169000
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||| ||||  |||||||  |||||||| ||||||    
T  18169069 tggcaaaattacacttttagtcccttaacttaatttcagataacagtttggtcatttatctttttttcat 18169000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 28843835 - 28843903
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaag 227  Q
    |||||||| |||||||||||| |||| ||||||||||| | || || | |||||||||||||| ||||||    
T  28843835 attttcaaacttcaaatctaatattcttatgcaaacatagatg-aggatcatagatttgaagattgaaag 28843903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 44920001 - 44920038
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  44920001 attttcaagcttcaaatctaatattcttatgcaaacat 44920038  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 49002236 - 49002305
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||| ||||||||||  |||||||  |||||||| ||||||    
T  49002236 tggcaaaattacacttttagtcccttaacttaacttcaggtaacagtttggtcctttatctttttttcat 49002305  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 49002446 - 49002409
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  49002446 attttcaagcttcaaatctaatattcttatgcaaacat 49002409  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 50710892 - 50710961
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggt-ctgttatctttatttcat 118  Q
    ||||||||||||| |   |||||||||||||||||||||||||  |||||| || |||||||| ||||||    
T  50710892 ggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttttatctttttttcat 50710961  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 50711171 - 50711102
Alignment:
Q  49 tggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    |||||||||||||| |   |||||||||||||||||||||||||  ||||| |  |||||||| ||||||    
T  50711171 tggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggacctttatctttttttcat 50711102  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 11839287 - 11839358
Alignment:
Q  159 ttttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaagctca 231  Q
    ||||||||| ||||||| || ||||||| |||||||||  | ||| |||||||||||||| ||| ||||||||    
T  11839287 ttttcaagcatcaaatccaaaattcataggcaaacatgagt-aagtaccatagatttgaacactaaaagctca 11839358  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 28844046 - 28843978
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||| |   ||||||||||||||||||||  ||| ||||||||  |||||||| ||||||    
T  28844046 ggcaaaattacacttttagtcccttaacttaatttcagacaacaatttggtcctttatctttttttcat 28843978  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 39778490 - 39778454
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaaca 194  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  39778490 attttcaagcttcaaatctaatattcttatgcaaaca 39778454  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 44036789 - 44036856
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaaa 226  Q
    ||||||||| ||||||||||| |||| ||||||||||| |  | |||| |||||||||||||| |||||    
T  44036789 attttcaagtttcaaatctaatattcttatgcaaacatagacg-agaatcatagatttgaagattgaaa 44036856  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 258966 - 258900
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacatggctgaagaaccatagatttgaagactgaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||| |  | || | |||||||||||||||||||    
T  258966 attttcaagcttcaaatctaatattcttatgcaaacatagacg-aggatcatagatttgaagactgaa 258900  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 258774 - 258823
Alignment:
Q  69 tcccttaacttaatttcaggtaacgatttggtctgttatctttatttcat 118  Q
    ||||||||||||||||||||||||  |||||||  |||||||| ||||||    
T  258774 tcccttaacttaatttcaggtaacagtttggtccattatctttttttcat 258823  T

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Target: scaffold0592 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 8599 - 8562
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  8599 attttcaagcttcaaatctaatattcttatgcaaacat 8562  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 41382 - 41419
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  41382 attttcaagcttcaaatctaatattcttatgcaaacat 41419  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 195
Target Start/End: Complemental strand, 73687 - 73547
Alignment:
Q  50 ggcaaaattacacctgcggtcccttaacttaatttcaggtaacgatttggtctgttatctttatttcatgccattttgattcttttagtctgtttgcaat 149  Q
    ||||||||||||| |   ||||||||||||||| |||||||||  |||||||  |||||||| ||||||  || |||| | ||||| |||  ||     |    
T  73687 ggcaaaattacacttttagtcccttaacttaatatcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccatt-----t 73593  T
Q  150 gcatatcgattttcaagcttcaaatctaagattcatatgcaaacat 195  Q
     |||||  ||||||||||||||||||||| |||  |||||||||||    
T  73592 tcatatacattttcaagcttcaaatctaatattattatgcaaacat 73547  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 323624 - 323587
Alignment:
Q  158 attttcaagcttcaaatctaagattcatatgcaaacat 195  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  323624 attttcaagcttcaaatctaatattcttatgcaaacat 323587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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