View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17158_high_34 (Length: 298)
Name: NF17158_high_34
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17158_high_34 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 10316437 - 10316706
Alignment:
| Q |
13 |
tgaataatgaactaaacttttaatgtgaaccagattttgtttaaatttaggagtgatgttttggaatctcaagttatttctacgtgaactagtgggctcc |
112 |
Q |
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| T |
10316437 |
tgaataatgaactaaactgttaatgtgaaccagattttgtttaaatttaggagtgatgttttggaatctcaagttatttctacgtgaactagtgggctcc |
10316536 |
T |
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| Q |
113 |
aacttctttcaataactgatagaagaaagttgaagctagacaaatcaaaatgcatgctcgacaaaggacattgaaggaaaatatgaggtgcagtttcatc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10316537 |
aacttctttcaataactgatagaagaaagttgaagctagacaaatcaacatgcatgctcgacaaaggacattgaaggaaaatatgaggtgcagtttcatc |
10316636 |
T |
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| Q |
213 |
attattcccacacatgctgcaagcctgcaatatgaaaaatagtaaatcctagatctcctaagtaaactat |
282 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
10316637 |
attattcccacacatgctgcaagcctgcaataggaaaaatagtaaatcctagatctcctaagtaaactat |
10316706 |
T |
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