View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17158_high_48 (Length: 248)
Name: NF17158_high_48
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17158_high_48 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 7906503 - 7906736
Alignment:
| Q |
1 |
caagttttaaatactcagaagaagatatgattccatgattagtctccaaactcattaccttatcttcaacacatttaagctttctctctaattgtttgat |
100 |
Q |
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| T |
7906503 |
caagttttaaatactcagaagaagatatgattccatgattagtctccaaactcattaccttatcttcaacacatttaagctttctctctaattgtttgat |
7906602 |
T |
|
| Q |
101 |
gcaactttcctttctttcattgattgaacacaattggaactcaagatccaagagagtttttctcaactcattagagacagttttgcttgaagataatgct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7906603 |
gcaactttcctttctttcattgattgaacacaattggaactcaagatccaagagagtttttctcaactcattagagacagttttgcttgaagataatgct |
7906702 |
T |
|
| Q |
201 |
tttataatgtgttgagctgcagcaaccatgtctt |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
7906703 |
tttataatgtgttgagctgcagcaaccatgtctt |
7906736 |
T |
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