View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17158_high_59 (Length: 223)

Name: NF17158_high_59
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17158_high_59
NF17158_high_59
[»] chr8 (32 HSPs)
chr8 (18-159)||(3439088-3439229)
chr8 (18-159)||(33037287-33037429)
chr8 (18-160)||(30656140-30656283)
chr8 (18-159)||(4759534-4759676)
chr8 (18-159)||(10683739-10683881)
chr8 (18-159)||(36979872-36980014)
chr8 (18-159)||(18852627-18852769)
chr8 (18-159)||(6311793-6311935)
chr8 (18-159)||(18870021-18870163)
chr8 (18-159)||(1261414-1261557)
chr8 (18-151)||(2627327-2627461)
chr8 (18-159)||(7289427-7289570)
chr8 (36-147)||(31042921-31043032)
chr8 (20-147)||(26288376-26288504)
chr8 (20-147)||(26301633-26301761)
chr8 (20-147)||(26313627-26313755)
chr8 (18-159)||(39784325-39784467)
chr8 (18-159)||(25327664-25327806)
chr8 (18-147)||(7412809-7412939)
chr8 (18-161)||(15290141-15290286)
chr8 (18-161)||(15470510-15470655)
chr8 (18-159)||(42575766-42575909)
chr8 (102-159)||(10688618-10688675)
chr8 (18-97)||(25689604-25689683)
chr8 (102-159)||(25689561-25689618)
chr8 (102-152)||(5701959-5702009)
chr8 (18-97)||(10688661-10688741)
chr8 (18-152)||(35745836-35745971)
chr8 (102-151)||(4456575-4456624)
chr8 (101-151)||(19175233-19175283)
chr8 (102-152)||(23799099-23799149)
chr8 (83-117)||(11383406-11383440)
[»] chr7 (45 HSPs)
chr7 (18-159)||(21640281-21640423)
chr7 (21-160)||(20357027-20357167)
chr7 (18-160)||(2058463-2058605)
chr7 (18-159)||(20343500-20343642)
chr7 (18-147)||(24789439-24789569)
chr7 (18-159)||(12406715-12406857)
chr7 (18-148)||(43504578-43504709)
chr7 (18-151)||(21646500-21646634)
chr7 (18-151)||(39730942-39731076)
chr7 (18-151)||(48408407-48408541)
chr7 (20-160)||(4873581-4873722)
chr7 (18-151)||(18409256-18409390)
chr7 (18-151)||(18414132-18414266)
chr7 (18-159)||(18392638-18392780)
chr7 (18-159)||(24023819-24023961)
chr7 (18-159)||(6592779-6592921)
chr7 (18-159)||(25767403-25767540)
chr7 (18-159)||(32060746-32060888)
chr7 (18-151)||(21811747-21811881)
chr7 (57-159)||(12397390-12397492)
chr7 (18-159)||(6594995-6595137)
chr7 (18-159)||(31109070-31109213)
chr7 (18-151)||(2479817-2479951)
chr7 (18-151)||(47264124-47264258)
chr7 (18-116)||(1532947-1533046)
chr7 (86-159)||(1532884-1532958)
chr7 (81-159)||(1562509-1562587)
chr7 (83-151)||(44847628-44847696)
chr7 (54-152)||(21983761-21983859)
chr7 (18-151)||(21989389-21989522)
chr7 (102-154)||(79955-80007)
chr7 (85-152)||(24260828-24260895)
chr7 (18-152)||(16880518-16880653)
chr7 (18-152)||(16885373-16885508)
chr7 (18-152)||(24265684-24265819)
chr7 (102-152)||(46515809-46515860)
chr7 (101-146)||(49092237-49092282)
chr7 (18-61)||(18389202-18389246)
chr7 (103-159)||(18390506-18390562)
chr7 (83-117)||(4509335-4509369)
chr7 (83-117)||(4511177-4511211)
chr7 (83-117)||(6431467-6431501)
chr7 (83-117)||(14070348-14070382)
chr7 (83-117)||(14380376-14380410)
chr7 (18-54)||(24260926-24260963)
[»] chr6 (54 HSPs)
chr6 (18-159)||(16578959-16579101)
chr6 (18-159)||(16616279-16616421)
chr6 (18-159)||(30125018-30125160)
chr6 (18-147)||(27647480-27647610)
chr6 (18-159)||(11857425-11857567)
chr6 (18-159)||(16554454-16554596)
chr6 (18-159)||(16631010-16631152)
chr6 (18-151)||(2171961-2172095)
chr6 (18-159)||(14741926-14742068)
chr6 (18-159)||(22010189-22010331)
chr6 (18-159)||(5674229-5674372)
chr6 (18-147)||(411698-411828)
chr6 (18-151)||(22709502-22709636)
chr6 (18-147)||(3073200-3073330)
chr6 (34-147)||(6097860-6097973)
chr6 (18-159)||(6136405-6136547)
chr6 (18-159)||(6438941-6439083)
chr6 (18-160)||(25420796-25420939)
chr6 (35-147)||(26253602-26253714)
chr6 (102-160)||(5266596-5266654)
chr6 (102-160)||(14737084-14737142)
chr6 (18-159)||(33342545-33342688)
chr6 (18-147)||(34166678-34166809)
chr6 (18-159)||(6026834-6026976)
chr6 (18-147)||(13150861-13150992)
chr6 (18-147)||(23896814-23896944)
chr6 (20-97)||(16652759-16652837)
chr6 (18-97)||(5266530-5266610)
chr6 (85-152)||(5343990-5344057)
chr6 (18-152)||(16839188-16839323)
chr6 (18-152)||(33329940-33330075)
chr6 (18-147)||(34164456-34164587)
chr6 (104-152)||(28155097-28155145)
chr6 (80-147)||(34151840-34151907)
chr6 (102-152)||(5016976-5017026)
chr6 (102-152)||(31085953-31086003)
chr6 (18-152)||(33335437-33335572)
chr6 (102-159)||(16652716-16652773)
chr6 (18-151)||(5756960-5757094)
chr6 (18-152)||(6005864-6005999)
chr6 (102-152)||(24714938-24714989)
chr6 (102-152)||(18234650-18234700)
chr6 (18-63)||(28155167-28155213)
chr6 (18-49)||(16554659-16554690)
chr6 (18-49)||(16578865-16578896)
chr6 (18-49)||(16616484-16616515)
chr6 (18-49)||(16631215-16631246)
chr6 (18-49)||(16652902-16652933)
chr6 (107-154)||(21272467-21272514)
chr6 (102-160)||(5571748-5571806)
chr6 (102-131)||(603772-603801)
chr6 (18-54)||(5343922-5343959)
chr6 (18-51)||(11857332-11857365)
chr6 (83-123)||(5413942-5413982)
[»] chr5 (58 HSPs)
chr5 (18-159)||(30631806-30631948)
chr5 (18-159)||(22536710-22536852)
chr5 (18-159)||(27450267-27450409)
chr5 (18-159)||(1456638-1456780)
chr5 (18-159)||(27445424-27445566)
chr5 (18-147)||(29719978-29720108)
chr5 (18-161)||(43599175-43599320)
chr5 (18-161)||(43604667-43604812)
chr5 (18-161)||(43610159-43610304)
chr5 (18-159)||(24136341-24136484)
chr5 (18-147)||(9789666-9789796)
chr5 (18-159)||(10592844-10592985)
chr5 (18-151)||(26177475-26177609)
chr5 (18-147)||(18442090-18442220)
chr5 (18-159)||(29402550-29402692)
chr5 (18-147)||(29722165-29722295)
chr5 (18-151)||(16407650-16407784)
chr5 (36-147)||(29752266-29752377)
chr5 (18-159)||(40379678-40379820)
chr5 (18-159)||(15045138-15045279)
chr5 (35-151)||(15465000-15465116)
chr5 (18-159)||(16546216-16546358)
chr5 (36-147)||(29751600-29751711)
chr5 (18-159)||(40381889-40382031)
chr5 (21-151)||(26170366-26170497)
chr5 (18-151)||(16409086-16409220)
chr5 (35-148)||(36931855-36931968)
chr5 (18-159)||(16543994-16544136)
chr5 (18-151)||(9352816-9352950)
chr5 (18-152)||(28807083-28807218)
chr5 (18-147)||(25077718-25077848)
chr5 (18-147)||(25135687-25135817)
chr5 (102-159)||(31180773-31180830)
chr5 (102-159)||(43592797-43592854)
chr5 (85-151)||(37556133-37556199)
chr5 (18-152)||(2785820-2785955)
chr5 (102-152)||(14520796-14520846)
chr5 (18-152)||(33768629-33768764)
chr5 (18-152)||(33791761-33791896)
chr5 (85-151)||(37560955-37561021)
chr5 (116-159)||(43625605-43625648)
chr5 (18-152)||(31396497-31396632)
chr5 (102-154)||(12083656-12083708)
chr5 (18-97)||(31180707-31180787)
chr5 (102-151)||(11916453-11916502)
chr5 (110-147)||(35388196-35388233)
chr5 (18-97)||(43592730-43592811)
chr5 (85-152)||(31401354-31401421)
chr5 (18-51)||(43592637-43592670)
chr5 (18-51)||(43599082-43599115)
chr5 (18-51)||(43604574-43604607)
chr5 (18-51)||(43610066-43610099)
chr5 (18-77)||(38219887-38219947)
chr5 (18-49)||(10593048-10593079)
chr5 (18-51)||(27445331-27445364)
chr5 (18-51)||(27450174-27450207)
chr5 (18-51)||(29751508-29751541)
chr5 (83-123)||(25412396-25412436)
[»] chr4 (41 HSPs)
chr4 (18-159)||(24742435-24742577)
chr4 (18-160)||(51520908-51521051)
chr4 (18-159)||(9223899-9224041)
chr4 (18-151)||(13992736-13992870)
chr4 (18-159)||(5733104-5733247)
chr4 (18-159)||(56141511-56141654)
chr4 (18-159)||(9228686-9228828)
chr4 (18-147)||(31495759-31495889)
chr4 (18-159)||(3814464-3814605)
chr4 (18-151)||(28467986-28468120)
chr4 (18-159)||(18856167-18856309)
chr4 (18-159)||(8392982-8393124)
chr4 (35-151)||(31985136-31985252)
chr4 (18-152)||(45347324-45347459)
chr4 (20-159)||(8395191-8395331)
chr4 (18-147)||(7122279-7122409)
chr4 (18-147)||(7124501-7124631)
chr4 (44-159)||(18860406-18860521)
chr4 (18-120)||(18712294-18712397)
chr4 (35-152)||(5148177-5148294)
chr4 (18-159)||(5135649-5135792)
chr4 (18-159)||(5137875-5138018)
chr4 (102-159)||(29761182-29761239)
chr4 (99-152)||(8689044-8689097)
chr4 (100-152)||(5143807-5143859)
chr4 (102-154)||(16628351-16628403)
chr4 (18-97)||(29761116-29761196)
chr4 (102-154)||(38151916-38151968)
chr4 (103-154)||(3778116-3778167)
chr4 (102-154)||(16622772-16622824)
chr4 (101-152)||(5268699-5268750)
chr4 (102-153)||(10047932-10047983)
chr4 (102-152)||(6742896-6742946)
chr4 (102-152)||(54867745-54867795)
chr4 (102-153)||(9194164-9194216)
chr4 (102-148)||(36314715-36314761)
chr4 (102-148)||(36328924-36328970)
chr4 (18-49)||(8393187-8393218)
chr4 (18-49)||(8395396-8395427)
chr4 (102-148)||(5396176-5396221)
chr4 (18-96)||(45356861-45356940)
[»] chr3 (74 HSPs)
chr3 (18-159)||(40372256-40372398)
chr3 (18-160)||(54634709-54634852)
chr3 (18-159)||(6716085-6716227)
chr3 (18-159)||(22172662-22172804)
chr3 (18-159)||(8477860-8478002)
chr3 (18-159)||(7167740-7167882)
chr3 (18-159)||(18656886-18657029)
chr3 (18-151)||(1306461-1306595)
chr3 (20-159)||(28503319-28503459)
chr3 (18-151)||(23198387-23198521)
chr3 (18-151)||(23200586-23200720)
chr3 (18-159)||(28501152-28501294)
chr3 (18-147)||(800698-800828)
chr3 (18-151)||(26928089-26928223)
chr3 (18-151)||(33386146-33386280)
chr3 (34-151)||(7782586-7782703)
chr3 (18-159)||(27352081-27352223)
chr3 (18-151)||(37408045-37408178)
chr3 (18-159)||(3617034-3617176)
chr3 (18-151)||(37726156-37726290)
chr3 (18-151)||(27453438-27453572)
chr3 (18-162)||(4601185-4601331)
chr3 (18-159)||(25637013-25637155)
chr3 (18-159)||(4598964-4599107)
chr3 (18-97)||(6718331-6718411)
chr3 (18-97)||(45282628-45282708)
chr3 (18-113)||(2671111-2671207)
chr3 (18-147)||(10055817-10055948)
chr3 (18-147)||(10058039-10058170)
chr3 (18-147)||(10060261-10060392)
chr3 (18-147)||(10062483-10062614)
chr3 (18-147)||(10064705-10064836)
chr3 (18-147)||(10066927-10067058)
chr3 (18-162)||(10208775-10208921)
chr3 (102-162)||(8738539-8738599)
chr3 (102-162)||(9090777-9090837)
chr3 (18-151)||(2672427-2672561)
chr3 (83-154)||(36029640-36029711)
chr3 (85-151)||(2676583-2676649)
chr3 (83-159)||(10210978-10211054)
chr3 (102-154)||(30709264-30709316)
chr3 (100-151)||(27974442-27974493)
chr3 (100-151)||(32143868-32143919)
chr3 (102-152)||(21711768-21711818)
chr3 (102-159)||(6718288-6718345)
chr3 (102-159)||(45282585-45282642)
chr3 (102-154)||(16264896-16264948)
chr3 (18-97)||(32143804-32143884)
chr3 (85-152)||(32475997-32476064)
chr3 (85-152)||(32480855-32480922)
chr3 (82-152)||(27038588-27038658)
chr3 (102-152)||(39032025-39032075)
chr3 (102-159)||(16498637-16498694)
chr3 (102-147)||(27027273-27027318)
chr3 (102-147)||(40734087-40734132)
chr3 (18-97)||(27986001-27986081)
chr3 (102-154)||(35926057-35926108)
chr3 (109-152)||(1730916-1730959)
chr3 (102-153)||(48438782-48438833)
chr3 (100-146)||(27985971-27986017)
chr3 (102-152)||(40592252-40592302)
chr3 (18-152)||(8512685-8512820)
chr3 (102-153)||(24694654-24694706)
chr3 (18-79)||(8738603-8738665)
chr3 (18-79)||(9090841-9090903)
chr3 (18-152)||(24968562-24968697)
chr3 (102-147)||(40735018-40735063)
chr3 (108-153)||(47923326-47923371)
chr3 (101-147)||(40845220-40845266)
chr3 (18-51)||(22172864-22172897)
chr3 (18-54)||(32475929-32475966)
chr3 (18-54)||(32480787-32480824)
chr3 (102-131)||(43404486-43404515)
chr3 (83-123)||(9634816-9634856)
[»] chr2 (28 HSPs)
chr2 (18-159)||(9295862-9296004)
chr2 (18-159)||(14291983-14292125)
chr2 (18-159)||(11098387-11098529)
chr2 (18-151)||(25410123-25410257)
chr2 (18-151)||(30832930-30833064)
chr2 (18-151)||(3492234-3492368)
chr2 (37-147)||(4484800-4484910)
chr2 (18-151)||(32289157-32289291)
chr2 (18-159)||(39811477-39811619)
chr2 (18-147)||(6266287-6266417)
chr2 (37-151)||(40739334-40739448)
chr2 (82-159)||(44310471-44310548)
chr2 (18-159)||(12647825-12647967)
chr2 (36-159)||(32247229-32247352)
chr2 (102-154)||(8389629-8389681)
chr2 (102-154)||(10706731-10706783)
chr2 (100-152)||(36757425-36757477)
chr2 (102-153)||(21630511-21630562)
chr2 (100-151)||(28258678-28258729)
chr2 (102-153)||(39483443-39483494)
chr2 (102-152)||(33528105-33528155)
chr2 (108-152)||(20522794-20522838)
chr2 (102-154)||(23077950-23078002)
chr2 (18-152)||(19344867-19345002)
chr2 (18-152)||(19349725-19349860)
chr2 (102-154)||(13569896-13569948)
chr2 (18-50)||(7450869-7450901)
chr2 (18-97)||(28258713-28258793)
[»] scaffold0491 (2 HSPs)
scaffold0491 (18-151)||(9166-9299)
scaffold0491 (18-151)||(11611-11744)
[»] scaffold0188 (1 HSPs)
scaffold0188 (21-151)||(17440-17571)
[»] chr1 (33 HSPs)
chr1 (18-147)||(20622678-20622808)
chr1 (18-159)||(21053540-21053682)
chr1 (18-159)||(9036003-9036145)
chr1 (35-151)||(24202260-24202376)
chr1 (18-151)||(19360921-19361055)
chr1 (18-147)||(19365781-19365911)
chr1 (18-147)||(40281971-40282101)
chr1 (18-151)||(51764999-51765133)
chr1 (21-159)||(41391047-41391185)
chr1 (18-159)||(44023377-44023519)
chr1 (18-147)||(9986798-9986928)
chr1 (18-159)||(39445940-39446082)
chr1 (18-152)||(25439406-25439541)
chr1 (18-159)||(44203218-44203360)
chr1 (18-159)||(1054514-1054656)
chr1 (18-152)||(25444599-25444734)
chr1 (35-147)||(13604108-13604220)
chr1 (102-162)||(24793663-24793723)
chr1 (102-159)||(41398764-41398821)
chr1 (83-151)||(21536121-21536189)
chr1 (18-152)||(26644381-26644516)
chr1 (102-152)||(13598967-13599017)
chr1 (159-205)||(16647854-16647900)
chr1 (102-152)||(37070334-37070384)
chr1 (102-159)||(13659840-13659897)
chr1 (102-151)||(3282273-3282322)
chr1 (102-152)||(16124188-16124238)
chr1 (18-79)||(24786905-24786967)
chr1 (18-79)||(24793727-24793789)
chr1 (18-97)||(41398699-41398778)
chr1 (85-152)||(43987956-43988023)
chr1 (102-139)||(29652381-29652418)
chr1 (82-114)||(1192296-1192328)
[»] scaffold0286 (1 HSPs)
scaffold0286 (18-151)||(21948-22082)
[»] scaffold0355 (1 HSPs)
scaffold0355 (18-159)||(3337-3479)
[»] scaffold0140 (1 HSPs)
scaffold0140 (35-151)||(7920-8036)
[»] scaffold0464 (1 HSPs)
scaffold0464 (18-159)||(803-945)
[»] scaffold0135 (1 HSPs)
scaffold0135 (18-159)||(34554-34696)
[»] scaffold0565 (1 HSPs)
scaffold0565 (18-160)||(3043-3186)
[»] scaffold1519 (1 HSPs)
scaffold1519 (18-123)||(519-625)
[»] scaffold1455 (1 HSPs)
scaffold1455 (84-161)||(1707-1784)
[»] scaffold0674 (1 HSPs)
scaffold0674 (18-159)||(4168-4310)
[»] scaffold0137 (1 HSPs)
scaffold0137 (18-159)||(5859-6002)
[»] scaffold0006 (4 HSPs)
scaffold0006 (35-147)||(132765-132877)
scaffold0006 (102-152)||(6252-6302)
scaffold0006 (102-152)||(3060-3110)
scaffold0006 (102-159)||(149601-149658)
[»] scaffold0665 (1 HSPs)
scaffold0665 (102-160)||(8216-8274)
[»] scaffold0087 (2 HSPs)
scaffold0087 (21-151)||(43443-43574)
scaffold0087 (100-152)||(36332-36384)
[»] scaffold0510 (1 HSPs)
scaffold0510 (18-147)||(1096-1226)
[»] scaffold0098 (1 HSPs)
scaffold0098 (100-151)||(45744-45795)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-159)||(176450-176592)
[»] scaffold0259 (1 HSPs)
scaffold0259 (18-152)||(1746-1881)
[»] scaffold0197 (2 HSPs)
scaffold0197 (18-152)||(18671-18806)
scaffold0197 (18-152)||(13791-13926)
[»] scaffold0028 (1 HSPs)
scaffold0028 (18-152)||(148451-148586)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-154)||(86153-86206)
[»] scaffold0466 (1 HSPs)
scaffold0466 (83-117)||(6750-6784)


Alignment Details
Target: chr8 (Bit Score: 122; Significance: 9e-63; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 3439229 - 3439088
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3439229 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatt 3439130  T
Q  118 tctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||| ||||||||||||||| |||| ||||||    
T  3439129 tctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 33037429 - 33037287
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33037429 tcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 33037330  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33037329 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 30656140 - 30656283
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  30656140 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 30656239  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30656240 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 30656283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 4759676 - 4759534
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  4759676 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgat 4759577  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4759576 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 10683881 - 10683739
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  10683881 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 10683782  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10683781 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 10683739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 36979872 - 36980014
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| |||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36979872 tcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 36979971  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36979972 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 36980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 18852769 - 18852627
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  18852769 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgat 18852670  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18852669 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 18852627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 6311793 - 6311935
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||    
T  6311793 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgat 6311892  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  6311893 ttctctgttcttccagaccacaaatttgaagccaataacaaca 6311935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 18870163 - 18870021
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||| || |  |||||||||||||||||||||||||||||||||||    
T  18870163 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 18870064  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18870063 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 1261557 - 1261414
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||| ||||    
T  1261557 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgat 1261458  T
Q  117 ttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 159  Q
    |||| |||||||||| |||||||||||||| || ||||||||||    
T  1261457 ttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 2627461 - 2627327
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||| | ||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  2627461 tcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 2627362  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||| |||||||||||||||||||||||||||||||    
T  2627361 ttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 7289570 - 7289427
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||| |||| ||||||||||||||| ||  ||||||| |||||||| ||| |||  |||||||||||||||||||||||||||||||| |    
T  7289570 tcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaactagctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcacta 7289471  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  7289470 tttctctgttcttccagaccacaaatttgaagtcaatatcaaca 7289427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 31043032 - 31042921
Alignment:
Q  36 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 135  Q
    |||||||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  136 acaaatttgaag 147  Q
    ||||||||||||    
T  31042932 acaaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 26288376 - 26288504
Alignment:
Q  20 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 118  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||    
T  26288376 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgattt 26288475  T
Q  119 ctctgttcttccagaccacaaatttgaag 147  Q
    |||||||||||||||||||||||||||||    
T  26288476 ctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 26301633 - 26301761
Alignment:
Q  20 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 118  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||    
T  26301633 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgattt 26301732  T
Q  119 ctctgttcttccagaccacaaatttgaag 147  Q
    |||||||||||||||||||||||||||||    
T  26301733 ctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 26313627 - 26313755
Alignment:
Q  20 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 118  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||    
T  26313627 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgattt 26313726  T
Q  119 ctctgttcttccagaccacaaatttgaag 147  Q
    |||||||||||||||||||||||||||||    
T  26313727 ctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 39784467 - 39784325
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||||||||||||||||    
T  39784467 tcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacga 39784369  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  39784368 tttctctgttcttccagaccacaaatttgaagccaatttcaaca 39784325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 25327806 - 25327664
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| || ||||| ||  ||||||| ||||||||| ||  |  ||||||||| ||||| |||||||||||||||||||    
T  25327806 tcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaactagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgat 25327707  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25327706 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 7412809 - 7412939
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| |||| | ||  ||||||||  |||||||||| | |||||||||||   |  |||||||||||||||||||||||||||||||||    
T  7412809 tcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcacgatgccaaaatcgtgtcacgat 7412908  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||||||||||||||| |||||||||||||||    
T  7412909 ttctctgttcttccaaaccacaaatttgaag 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 15290286 - 15290141
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||||||| | || |||||||||||||||    
T  15290286 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcaatcccaaaatcgtgtcac 15290189  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 161  Q
    |||||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  15290188 gatttccctgttcttccaaaccacaaatttgaagacaatctcaacaca 15290141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 15470655 - 15470510
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||||||| | || |||||||||||||||    
T  15470655 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcaatcccaaaatcgtgtcac 15470558  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 161  Q
    |||||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  15470557 gatttccctgttcttccaaaccacaaatttgaagacaatctcaacaca 15470510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 42575766 - 42575909
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||||||| |||| |||||||||||||||    
T  42575766 tcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcac 42575863  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  42575864 gatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 10688675 - 10688618
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 25689683 - 25689604
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25689683 tcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacggca-cccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25689618 - 25689561
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 5702009 - 5701959
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 10688741 - 10688661
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||||||    
T  10688741 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 35745836 - 35745971
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  ||  ||| || | ||||||||| | ||||  ||||||||||||  | |||||| | ||||    
T  35745836 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 35745933  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  35745934 attcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 4456575 - 4456624
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 4456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 19175283 - 19175233
Alignment:
Q  101 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||| |||||||| |||||||||||| ||| |||||||||||||||    
T  19175283 aaaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 23799149 - 23799099
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 11383440 - 11383406
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||| ||||||||||||||||||||||||||    
T  11383440 aaatcgtgccacgatgccaaaatcgtgtcacgatt 11383406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 21640281 - 21640423
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21640281 tcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 21640380  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21640381 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 20357167 - 20357027
Alignment:
Q  21 tgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 119  Q
    |||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20357167 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 20357068  T
Q  120 tctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20357067 tctgttcttccagaccacaaatttgaagccaatatcaacac 20357027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 2058463 - 2058605
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  2058463 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctc-aaatcgtgtcacgatgccaaaatcgtgtcacgat 2058561  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2058562 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 2058605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 20343642 - 20343500
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| ||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  20343642 tcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgat 20343543  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  20343542 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 24789569 - 24789439
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  24789569 tcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgat 24789470  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  24789469 ttccctgttcttccagaccacaaatttgaag 24789439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 12406715 - 12406857
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  | ||||| ||||||||||||  |  |||||||||||||||||||||||||||||||||||    
T  12406715 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 12406814  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12406815 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 43504578 - 43504709
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  43504578 tcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 43504677  T
Q  117 ttctctgttcttccagaccacaaatttgaagc 148  Q
    ||| ||||||||||||||||||||||||||||    
T  43504678 ttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 21646500 - 21646634
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| | ||||||||||    
T  21646500 tcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgat 21646599  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||| |||||||||||||||||||    
T  21646600 ttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 39731076 - 39730942
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  39731076 tcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 39730977  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  39730976 ttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 48408541 - 48408407
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  48408541 tcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 48408442  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| ||||||||||||||||||||||    
T  48408441 ttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 4873581 - 4873722
Alignment:
Q  20 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 118  Q
    ||||||||||||||||| |||||| |||||||| ||  ||||||| ||| || |||||  |  |||||||||||||||||||||||||||||||||||||    
T  4873581 gtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 4873680  T
Q  119 ctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4873681 ctctgttcttccagaccacaaatttgaagccaatatcaacac 4873722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 18409256 - 18409390
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| ||| ||||||||| ||||| ||||||||||| | ||||||||||||| | ||||||||||||||||||||| |||||| |||||    
T  18409256 tcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaaattcgtgttacgat 18409355  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||| |||||||||||||||||    
T  18409356 ttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 18414132 - 18414266
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||| |||||||||||| ||||||||||||||| || |||||||| | ||||||||||||| | |||||||| |||||||||||| ||||||||||||    
T  18414132 tcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaaattcgtgtcacgat 18414231  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||| ||||||||||||||    
T  18414232 ttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 18392638 - 18392780
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| ||||||||||| |||||    
T  18392638 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacga 18392736  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||| ||||||||||| ||||||||||||||| |||| ||||||    
T  18392737 tttccctgttcttccaaaccacaaatttgaagacaatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 24023961 - 24023819
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||| | ||  |  ||||||||| |||||||||| ||||||||||||||    
T  24023961 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctctgccacttgaaatcgtgccacgatgccacaatcgtgtcacgat 24023862  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  24023861 ttctctgttcttccagaccacaaatttgaagctaatatcaaca 24023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 6592779 - 6592921
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  6592779 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacg 6592876  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6592877 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 25767403 - 25767540
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| | ||||||||||    
T  25767403 tcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgat 25767502  T
Q  117 ttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 159  Q
    ||||      ||||||||||||||||||||||| ||||||||||    
T  25767503 ttct------ttccagaccacaaatttgaagccaaatatcaaca 25767540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 32060746 - 32060888
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  32060746 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacg 32060843  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  32060844 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 21811881 - 21811747
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| | | |||||||||| | | | |||||||||||||| |||||||||| |||||    
T  21811881 tcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcacggcatctc-agatcgtgtcacgatggcaaaatcgtgacacga 21811783  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaa 151  Q
    || |||||||||||||||||||||||||||||||||    
T  21811782 ttcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 12397390 - 12397492
Alignment:
Q  57 cctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatca 156  Q
    ||||||| ||||||||||||  |  |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12397390 cctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatatca 12397489  T
Q  157 aca 159  Q
    |||    
T  12397490 aca 12397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 6594995 - 6595137
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  6594995 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacg 6595092  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||| ||||||||||||||||||||| |||| ||||||    
T  6595093 atttccctgtttttccagaccacaaatttgaagacaatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 31109213 - 31109070
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcac-ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||| || |||||   ||||||||| |||||||||||||||||||||||    
T  31109213 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggcactt-gaaatcgtgccacgatgccaaaatcgtgtcacg 31109115  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  31109114 atttctctgttcttccaaaccacaaatttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 2479817 - 2479951
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||| |||||||| |||| ||||| ||||||||  |||||||||| | |||||||||||     ||||||||||||||||||||||||||||||| ||    
T  2479817 tcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaat 2479916  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| || |||||||||||||||||||    
T  2479917 ttctctgttcttacaaaccacaaatttgaagccaa 2479951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 47264124 - 47264258
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| || ||| ||| ||||||||  |||||| ||| | |||||||| ||   | ||||||||||||||||||||||||||||||||||    
T  47264124 tcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgat 47264223  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||| |||||||| |||||||||||||||||||    
T  47264224 ttctctattcttccaaaccacaaatttgaagccaa 47264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 1533046 - 1532947
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||| | ||||| ||||||||||||||| ||||||||||||    
T  1533046 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  86 tcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 159  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 1562509 - 1562587
Alignment:
Q  81 cgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1562509 cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 44847696 - 44847628
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaa 44847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 21983761 - 21983859
Alignment:
Q  54 caccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||| | |||||||| ||   | ||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21983761 caccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 21989389 - 21989522
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||||| ||  | |||||||| |||||||   | |||||||| | |||||||| ||   | ||||||||||||||||   ||||| ||||||||||    
T  21989389 tcgtgtcacgtttcacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgatt 21989488  T
Q  118 tctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||| |||||||||||||||||||    
T  21989489 tctctgttcttccaaaccacaaatttgaagccaa 21989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 79955 - 80007
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatat 80007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 24260895 - 24260828
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 24260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 16880518 - 16880653
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||| |||| ||||| ||  |||  | ||||||||||||| |||||||||| |||||    
T  16880518 tcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctga-tcgtgtcacgatggcaaaatcgtgacacga 16880616  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||| ||||||| ||||| ||||||||| ||||    
T  16880617 ttcctctgctcttccaaaccactaatttgaagtcaat 16880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 16885373 - 16885508
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||| ||||||||| |||||| |||||||||||  || |||| |||| ||||| ||  |||  | ||||||||||||| |||||||||| |||||    
T  16885373 tcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctga-tcgtgtcacgatggcaaaatcgtgacacga 16885471  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||| ||||||| ||||| ||||||||| ||||    
T  16885472 ttcctctgctcttccaaaccactaatttgaagtcaat 16885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 24265819 - 24265684
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  |||  | |||||||||||   |||||||||| |||||    
T  24265819 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctga-tcgtgtcacgactgcaaaatcgtgacacga 24265721  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||||||| ||| ||||| ||||||||| ||||    
T  24265720 ttcctctgttctcccaaaccactaatttgaagtcaat 24265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 46515860 - 46515809
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaat 152  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaat 46515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  101 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 146  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18389202 - 18389246
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgc 61  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  18389202 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  103 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||| |||| ||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 14070348 - 14070382
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||| ||||||||||||||||||||||||||    
T  14070348 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Original strand, 14380376 - 14380410
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||| ||||||||||||||||||||||||||    
T  14380376 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 24260963 - 24260926
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgc 54  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24260963 tcgtgtcacgatttcccaagatcgtgtcacgattttgc 24260926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 16578959 - 16579101
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16578959 tcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgat 16579058  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  16579059 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 16616421 - 16616279
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16616421 tcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgat 16616322  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  16616321 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 30125160 - 30125018
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||||| ||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30125160 tcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 30125061  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30125060 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 27647610 - 27647480
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27647610 tcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgat 27647511  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  27647510 ttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 11857425 - 11857567
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||  |  |||||||||||||||||||||||||||||||||||    
T  11857425 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 11857524  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11857525 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 16554596 - 16554454
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  16554596 tcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgat 16554497  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  16554496 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 16631152 - 16631010
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  16631152 tcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgat 16631053  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  16631052 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 2171961 - 2172095
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| || |||| ||||    
T  2171961 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgat 2172060  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||| ||||    
T  2172061 ttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 14742068 - 14741926
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| |||| |||||| |||||||| ||  ||||||| |||||||||| |  |  |||||||||||||||||||||||||||||||||||    
T  14742068 tcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 14741969  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14741968 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 22010331 - 22010189
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||| || |||||  |  |||||||||||||||||||||||||||||||||||    
T  22010331 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 22010232  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22010231 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 5674372 - 5674229
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| || |||||||||    
T  5674372 tcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgat 5674273  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa-tatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  5674272 ttctctgttcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 411828 - 411698
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| |||||||| ||||||||||||    
T  411828 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgat 411729  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| || ||||||||||||||||||||||||    
T  411728 ttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 22709502 - 22709636
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||| |||| | | ||||||||||||| ||||||| |||||||| |||    
T  22709502 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgat 22709601  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  22709602 ttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 3073200 - 3073330
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||| | |||||||||||||||| |||||||| |  | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  3073200 tcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 3073299  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||  |||||||||||||||||||||||||||    
T  3073300 tttcctgttcttccagaccacaaatttgaag 3073330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 6097860 - 6097973
Alignment:
Q  34 caaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaga 133  Q
    |||||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||| |||||| ||||||||||| |    
T  6097860 caaatcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaa 6097959  T
Q  134 ccacaaatttgaag 147  Q
    ||||||||||||||    
T  6097960 ccacaaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 6136405 - 6136547
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||||||| ||||||| |||||||||   |||||||| | |||||||||||| || ||||||||||| |||| |||||||||||||||||    
T  6136405 tcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggcatcc-gaaatcgtgtctcgattccaaaatcgtgtcacga 6136503  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||| ||||||||||| ||||||||||||||| |||| ||||||    
T  6136504 tttccctgttcttccaaaccacaaatttgaagacaatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 6438941 - 6439083
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| ||||||| |||| || |||| || | ||||||||||| | || |||||||||||| |||||||||||||||||    
T  6438941 tcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacga 6439039  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||    
T  6439040 tttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 25420939 - 25420796
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||| | ||||||| ||||||||    
T  25420939 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacggtcccaaaattgtgtcacg 25420842  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||    
T  25420841 atttccctgttcttccagaccacaaatttgaagacaatctcaacac 25420796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 26253714 - 26253602
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||||||||||||| ||||||||| | ||| ||||||| | | | ||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  26253714 aaatcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 26253615  T
Q  135 cacaaatttgaag 147  Q
    |||||||||||||    
T  26253614 cacaaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 5266596 - 5266654
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 5266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 14737142 - 14737084
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 14737084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 33342545 - 33342688
Alignment:
Q  18 tcgtgtcacgatttccca--aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    ||||||||||||||||||  ||||||| |||||||| |||||| ||||| | |||||||||||| || ||||||| ||| |||| |||||||||||||||    
T  33342545 tcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgcgtcgcgatcccaaaatcgtgtcac 33342642  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||  |||||||||| ||||||||||||||| |||| ||||||    
T  33342643 gatttccatgttcttccaaaccacaaatttgaagacaatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 34166809 - 34166678
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  34166809 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 34166712  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  34166711 gatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 6026976 - 6026834
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||| || |||| |||||||||||||| |||||  ||||||||||||    
T  6026976 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctctcg-cacctcgaaatcgtgtcacaatgccgcaatcgtgtcacg 6026879  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| || |||||||| ||||||||||||||| |||| ||||||    
T  6026878 atttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 13150992 - 13150861
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  13150992 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 13150895  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| |||||||||||  ||||||||||||||    
T  13150894 gatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 23896814 - 23896944
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| |||| ||||  ||||||||  |||||||||| | | ||||||  |   | ||||||||||||||||||||||||||||||||||    
T  23896814 tcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgat 23896913  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    || ||||||||| || |||||||||||||||    
T  23896914 ttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 16652837 - 16652759
Alignment:
Q  20 gtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    |||||||||||| ||||||||||  ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  16652837 gtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcaccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 5266530 - 5266610
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  5266530 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 5343990 - 5344057
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| | |||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 16839188 - 16839323
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||||| | ||||    
T  16839188 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 16839285  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  16839286 attcctctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 33330075 - 33329940
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||||| | ||||    
T  33330075 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 33329978  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  33329977 attcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 34164587 - 34164456
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||| |||||||||||    
T  34164587 tcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatcccagaatcgtgtcac 34164490  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| |||||||||||  ||||||||||||||    
T  34164489 gatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 28155145 - 28155097
Alignment:
Q  104 atcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 34151907 - 34151840
Alignment:
Q  80 ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 147  Q
    ||||||||| |||||||| ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34151907 ccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 5017026 - 5016976
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 31086003 - 31085953
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 33335572 - 33335437
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||||| |  |||    
T  33335572 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgaaacg 33335475  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  33335474 attcctctgttcttccaaaccacaaatttgaagccaat 33335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 16652773 - 16652716
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 5757094 - 5756960
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| |||| ||||  ||||||||  |||||||||| | | |||||| ||   | |||| |||||||||||||| ||||||||||| ||    
T  5757094 tcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcacgatgccacaatcgtgtcacaat 5756995  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||| |||||  | |||| |||||| |||||||    
T  5756994 ttctctattcttttaaaccataaatttaaagccaa 5756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 6005864 - 6005999
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | |||| |||| | ||||  ||||||||||||  | |||||| | ||||    
T  6005864 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcatggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 6005961  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||| ||||| ||||||||||||||||||||    
T  6005962 attcctctgtttttccaaaccacaaatttgaagccaat 6005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 24714938 - 24714989
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaat 152  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaat 24714989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 18234650 - 18234700
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  18234650 aaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 28155213 - 28155167
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 63  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  28155213 tcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 28155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 16554690 - 16554659
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  16554690 tcgtgtcacgatttcccaaatcgtgtcacgat 16554659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 16578865 - 16578896
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  16578865 tcgtgtcacgatttcccaaatcgtgtcacgat 16578896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 16616515 - 16616484
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  16616515 tcgtgtcacgatttcccaaatcgtgtcacgat 16616484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 16631246 - 16631215
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  16631246 tcgtgtcacgatttcccaaatcgtgtcacgat 16631215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 16652933 - 16652902
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  16652933 tcgtgtcacgatttcccaaatcgtgtcacgat 16652902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 21272514 - 21272467
Alignment:
Q  107 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    ||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaatat 21272467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 5571806 - 5571748
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||||||||||||||||||| |||| ||| | ||||||||||||| |||  |||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaattcaacac 5571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 603772 - 603801
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttcca 131  Q
    ||||||||||||||||||||||||||||||    
T  603772 aaatcgtgtcacgatttctctgttcttcca 603801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 5343922 - 5343959
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgc 54  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  5343922 tcgtgtcacgatttcccaagatcgtgtcacgattttgc 5343959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 11857332 - 11857365
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  11857332 tcgtgccacgatttcccaaatcgtgtcacgattt 11857365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 5413942 - 5413982
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 123  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  5413942 aaatcgtgtcacgattaccaaatcgtgtcacgatttctctg 5413982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 3e-56; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 30631806 - 30631948
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||||| |||||||||||||| ||  ||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30631806 tcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 30631905  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30631906 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 30631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 22536710 - 22536852
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22536710 tcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgat 22536809  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  22536810 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 27450267 - 27450409
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  27450267 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 27450366  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27450367 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 1456780 - 1456638
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  |||| || |||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  1456780 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 1456681  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1456680 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 27445424 - 27445566
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  27445424 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 27445523  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  27445524 ttctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 29720108 - 29719978
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  29720108 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgat 29720009  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  29720008 ttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 43599175 - 43599320
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||| ||||||||||||||||||    
T  43599175 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacga 43599274  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaacaca 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43599275 tttctctgttcttccagaccacaaatttgaagccaatatcaacaca 43599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 43604667 - 43604812
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||| ||||||||||||||||||    
T  43604667 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacga 43604766  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaacaca 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43604767 tttctctgttcttccagaccacaaatttgaagccaatatcaacaca 43604812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 43610159 - 43610304
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||| ||||||||||||||||||    
T  43610159 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacga 43610258  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaacaca 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43610259 tttctctgttcttccagaccacaaatttgaagccaatatcaacaca 43610304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 24136341 - 24136484
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||| ||||||||||||    
T  24136341 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgat 24136440  T
Q  117 ttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 159  Q
    |||| ||||||||||||||||||||||||| || ||||||||||    
T  24136441 ttctgtgttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 9789666 - 9789796
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  9789666 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 9789765  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  9789766 ttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 10592985 - 10592844
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  10592985 tcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacggcacccggaa-tcgtgtcacgataccaaaatcgtgtcacgat 10592887  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  10592886 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 26177609 - 26177475
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  26177609 tcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 26177510  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||| |||||||||||||||||||||||||||||||    
T  26177509 ttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 18442090 - 18442220
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||||||||||| ||||||||||||    
T  18442090 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgat 18442189  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  18442190 ttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 29402692 - 29402550
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||| |||  |  ||||||||| |||||||||||||||||||||||||    
T  29402692 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccacttgaaatcgtgccacgatgccaaaatcgtgtcacgat 29402593  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29402592 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 29402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 29722295 - 29722165
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||||  ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  29722295 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgat 29722196  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  29722195 ttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 16407784 - 16407650
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||| | ||||||||||| | | |||||||||||||||| |||| ||||||||||||    
T  16407784 tcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgat 16407685  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  16407684 ttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 29752266 - 29752377
Alignment:
Q  36 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 135  Q
    ||||||| |||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  29752266 aatcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  136 acaaatttgaag 147  Q
    ||||||||||||    
T  29752366 acaaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 40379820 - 40379678
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| ||||||||||| |||||    
T  40379820 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacga 40379722  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||    
T  40379721 tttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 15045138 - 15045279
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||| | | ||||||||||||||| ||||||||||||||||||    
T  15045138 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgat 15045236  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  15045237 ttctctgttcttccaaactacaaatttgaagccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 15465000 - 15465116
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  15465000 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagac 15465099  T
Q  135 cacaaatttgaagccaa 151  Q
    |||||||||||||||||    
T  15465100 cacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 16546358 - 16546216
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| ||||||||||| |||||    
T  16546358 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacga 16546260  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16546259 tttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 29751600 - 29751711
Alignment:
Q  36 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 135  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||  ||||||||| || |||||||||||| |||||||||||||||    
T  29751600 aatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagacc 29751699  T
Q  136 acaaatttgaag 147  Q
    ||||||||||||    
T  29751700 acaaatttgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 40382031 - 40381889
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| ||||||||||| |||||    
T  40382031 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacga 40381933  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||| |||||||| |||||||||||||||||| |||| ||||||    
T  40381932 tttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 26170497 - 26170366
Alignment:
Q  21 tgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 119  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||| |||||||||||||||    
T  26170497 tgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttc 26170398  T
Q  120 tctgttcttccagaccacaaatttgaagccaa 151  Q
     ||||||||||| |||| ||||||||||||||    
T  26170397 cctgttcttccataccataaatttgaagccaa 26170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 16409220 - 16409086
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| |||||||||| |||| ||||| ||||| | |||||||| || | | ||||||||||||||||||||| ||||||||||||    
T  16409220 tcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 16409121  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| ||||||||||||||||||||||    
T  16409120 ttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 36931968 - 36931855
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||||||||||||| ||||||||||| | |||||||| || | | |||||||| |||||||||||| ||||||||||||||||||||||||||| ||    
T  36931968 aaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaac 36931869  T
Q  135 cacaaatttgaagc 148  Q
    ||||||||||||||    
T  36931868 cacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 16544136 - 16543994
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| || | |||||||| ||||| | || |||||||||||| ||||||||||| |||||    
T  16544136 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagcacctccaa-tcgtgtcacgattccaaaatcgtggcacga 16544038  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16544037 tttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 9352950 - 9352816
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| || ||||||| ||||||||  |||||||||| | |||||||||||   | ||||||||||||||||||| ||||| ||||||||    
T  9352950 tcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccacaatcgcgtcacgat 9352851  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| || |||||||||||||||||||    
T  9352850 ttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 28807218 - 28807083
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| || | ||||||||| | | | |||||||||||||  |||||||||| |||||    
T  28807218 tcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgattgcaaaatcgtgacacga 28807120  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || |||||||||||||||||| |||||||||||||||    
T  28807119 ttcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 25077848 - 25077718
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| | ||| | |||||||||||||| | || ||| |||||||| ||||||||||||||||    
T  25077848 tcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctagctcacggcacctccaa-tcgcgtcacgatcccaaaatcgtgtcacg 25077751  T
Q  115 atttctctgttcttccagaccacaaatttgaag 147  Q
    ||||| |||||||||||||||||||||||||||    
T  25077750 atttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 25135817 - 25135687
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| | ||| | |||||||||||||| | || ||| |||||||| ||||||||||||||||    
T  25135817 tcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctagctcacggcacctccaa-tcgcgtcacgatcccaaaatcgtgtcacg 25135720  T
Q  115 atttctctgttcttccagaccacaaatttgaag 147  Q
    ||||| |||||||||||||||||||||||||||    
T  25135719 atttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 31180773 - 31180830
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 43592797 - 43592854
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 37556199 - 37556133
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37556199 atcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 2785820 - 2785955
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||||| | ||||    
T  2785820 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 2785917  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  2785918 attcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 14520796 - 14520846
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 33768629 - 33768764
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||||| | ||||    
T  33768629 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 33768726  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  33768727 attcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 33791761 - 33791896
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||||| | ||||    
T  33791761 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaatcgcgacacg 33791858  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  33791859 attcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 37561021 - 37560955
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37561021 atcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 31396632 - 31396497
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  | ||||  ||||||||||||  | |||||||| ||||    
T  31396632 tcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccga--tcgtgtcacgattgccaaatcgtgacacg 31396535  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||| ||| ||||||||||||||||||||    
T  31396534 attcctctgttctcccaaaccacaaatttgaagccaat 31396497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 12083708 - 12083656
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatat 12083656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 31180707 - 31180787
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||| ||||  ||||||||||||||||    
T  31180707 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 11916502 - 11916453
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 35388196 - 35388233
Alignment:
Q  110 tcacgatttctctgttcttccagaccacaaatttgaag 147  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 43592730 - 43592811
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccc-cgaaatcgtgtcacgat 97  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||||    
T  43592730 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgat 43592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 31401421 - 31401354
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||  | |||||||| ||||||| |||| |||| ||| ||||||||||||||||||||    
T  31401421 atcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaat 31401354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 43592637 - 43592670
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  43592637 tcgtgtcacgatttcccaaatcgtgtcacgattt 43592670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 43599082 - 43599115
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  43599082 tcgtgtcacgatttcccaaatcgtgtcacgattt 43599115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 43604574 - 43604607
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  43604574 tcgtgtcacgatttcccaaatcgtgtcacgattt 43604607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 43610066 - 43610099
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  43610066 tcgtgtcacgatttcccaaatcgtgtcacgattt 43610099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 38219887 - 38219947
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggca 77  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||| ||| | |||||||||||    
T  38219887 tcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggca 38219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 10593079 - 10593048
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  10593079 tcgtgtcacgatttcccaaatcgtgtcacgat 10593048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 27445331 - 27445364
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  27445331 tcgtgccacgatttcccaaatcgtgtcacgattt 27445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 27450174 - 27450207
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  27450174 tcgtgccacgatttcccaaatcgtgtcacgattt 27450207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 29751508 - 29751541
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    |||||||||||||| |||||||||||||||||||    
T  29751508 tcgtgtcacgattttccaaatcgtgtcacgattt 29751541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 25412436 - 25412396
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 123  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  25412436 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 3e-56; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 24742435 - 24742577
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24742435 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 24742534  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24742535 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 24742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 51520908 - 51521051
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||| |||||||||| |||||| |||||||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  51520908 tcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 51521007  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  51521008 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 51521051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 9224041 - 9223899
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||  |  |||||||||||||||||||||||||||||||||||    
T  9224041 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 9223942  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9223941 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 9223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 13992736 - 13992870
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| || | ||||||||||||||||||||||| ||||||||||||    
T  13992736 tcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 13992835  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  13992836 ttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 5733104 - 5733247
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagct-cacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||| ||    
T  5733104 tcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatga 5733203  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  5733204 tttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 56141654 - 56141511
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttg-caccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||| |  ||||||| |||||||||| | || | |||||||||||||||||||||||||||||||||    
T  56141654 tcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacga 56141555  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  56141554 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 9228828 - 9228686
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| | ||||||||||  |  |||||||||||||||||||||||||||||||||||    
T  9228828 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 9228729  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9228728 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 31495759 - 31495889
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  31495759 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 31495858  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  31495859 ttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 3814464 - 3814605
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    ||||||||||||||||||||||||| |||||||| ||  | ||||| || ||| ||||   |  ||||||||||||||||||||||||||||||||||||    
T  3814464 tcgtgtcacgatttcccaaatcgtgacacgatttggcgtcttgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 3814563  T
Q  118 tctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3814564 tctctgttcttccagaccacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 28468120 - 28467986
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||| ||||||||||| ||||||||||||    
T  28468120 tcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgat 28468021  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||| |||||||||||||||||||    
T  28468020 ttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 18856167 - 18856309
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| ||| || |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||||||||||||||||    
T  18856167 tcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacga 18856265  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  18856266 tttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 8393124 - 8392982
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  8393124 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacg 8393027  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8393026 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 31985252 - 31985136
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||||||||||||| ||||||||| | ||||||||||| | | | ||||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  31985252 aaatcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagat 31985153  T
Q  135 cacaaatttgaagccaa 151  Q
    |||||||||||||||||    
T  31985152 cacaaatttgaagccaa 31985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 45347459 - 45347324
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||| | | || |||||||||||| |||||||||||||||||    
T  45347459 tcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctctaa-tcgtgtcacgattccaaaatcgtgtcacga 45347361  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45347360 tttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 8395331 - 8395191
Alignment:
Q  20 gtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||| |||||||||||  ||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  8395331 gtgtcacgattttcccaaatcgtgctacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgat 8395234  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  8395233 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 7122409 - 7122279
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  7122409 tcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacg 7122312  T
Q  115 atttctctgttcttccagaccacaaatttgaag 147  Q
    ||||| ||||||||||| |||||||||||||||    
T  7122311 atttccctgttcttccacaccacaaatttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 7124631 - 7124501
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  7124631 tcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacg 7124534  T
Q  115 atttctctgttcttccagaccacaaatttgaag 147  Q
    ||||| ||||||||||| |||||||||||||||    
T  7124533 atttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 18860406 - 18860521
Alignment:
Q  44 cacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 142  Q
    |||||||||||| || |||| || | ||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18860406 cacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 18860504  T
Q  143 tgaagccaatatcaaca 159  Q
    |||||||||| ||||||    
T  18860505 tgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 18712397 - 18712294
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||  |  |||||||||||||||||||||||||||||||||||    
T  18712397 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 18712298  T
Q  117 ttct 120  Q
    ||||    
T  18712297 ttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 5148177 - 5148294
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    |||||||| |||||||   |||||||||| |||||||||| ||   | ||||||||||||| ||  |||||||||||||||||||||| |||||||| ||    
T  5148177 aaatcgtgccacgattggtcaccctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaac 5148276  T
Q  135 cacaaatttgaagccaat 152  Q
    ||||||||||||||||||    
T  5148277 cacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 5135792 - 5135649
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  5135792 tcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 5135695  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5135694 gatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 5138018 - 5137875
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  5138018 tcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 5137921  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5137920 gatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 29761182 - 29761239
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatatcaaca 29761239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 8689097 - 8689044
Alignment:
Q  99 ccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 5143807 - 5143859
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 16628403 - 16628351
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 16628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 29761116 - 29761196
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  29761116 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 38151968 - 38151916
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 38151916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 3778116 - 3778167
Alignment:
Q  103 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 3778167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 16622824 - 16622772
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatat 16622772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 5268750 - 5268699
Alignment:
Q  101 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 10047932 - 10047983
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 153  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 6742946 - 6742896
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 54867745 - 54867795
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 9194164 - 9194216
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 153  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  9194164 aaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 36314761 - 36314715
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 148  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 36328970 - 36328924
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 148  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 8393218 - 8393187
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  8393218 tcgtgtcacgatttcccaaatcgtgtcacgat 8393187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 8395427 - 8395396
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgat 49  Q
    ||||||||||||||||||||||||||||||||    
T  8395427 tcgtgtcacgatttcccaaatcgtgtcacgat 8395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 5396221 - 5396176
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 148  Q
    |||||||| |||||||||||||||||| || ||||||||||||||||    
T  5396221 aaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagc 5396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 45356940 - 45356861
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacga 96  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||| | | |||||||||| | | ||||||||||||||    
T  45356940 tcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctc-aaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 3e-56; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 40372398 - 40372256
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40372398 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 40372299  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40372298 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 54634852 - 54634709
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  54634852 tcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgat 54634753  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||| ||||||||||||||||||||||||||| |||| |||||||    
T  54634752 ttccctgttcttccagaccacaaatttgaagacaatctcaacac 54634709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 6716227 - 6716085
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6716227 tcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgat 6716128  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||| ||| |||| ||||||    
T  6716127 ttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 22172804 - 22172662
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22172804 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgat 22172705  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22172704 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 8477860 - 8478002
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  8477860 tcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaat 8477959  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  8477960 ttctctgttcttccagaccacaaatttgaagccaatgtcaaca 8478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 7167740 - 7167882
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  7167740 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgat 7167839  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  7167840 ttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 18656886 - 18657029
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagct-cacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||| ||    
T  18656886 tcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatga 18656985  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  18656986 tttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 1306461 - 1306595
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||||| |||| ||||||||||||||||||||||| || |||||||||    
T  1306461 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgat 1306560  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||| ||||||||||||||    
T  1306561 ttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 28503459 - 28503319
Alignment:
Q  20 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 118  Q
    ||||||||||||||||| |||||| |||||||| ||  || |||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  28503459 gtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 28503360  T
Q  119 ctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  28503359 ctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 23198387 - 23198521
Alignment:
Q  18 tcgtgtcacgatttc-ccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||| | ||||||||||| | | |||||||||||||||| |||| ||||||||||||    
T  23198387 tcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgat 23198486  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  23198487 ttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 23200586 - 23200720
Alignment:
Q  18 tcgtgtcacgatttc-ccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||| | ||||||| ||| | | ||||||||||||||||||||| ||||||||||||    
T  23200586 tcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 23200685  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  23200686 ttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 28501294 - 28501152
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| |||| |||||| |||||||| |   ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  28501294 tcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 28501195  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  28501194 ttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 800828 - 800698
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  800828 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 800729  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||| ||||    
T  800728 ttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 26928223 - 26928089
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| || |||||||||||| ||||||||||| | |||||||||||   | ||||||||||||||||||||| ||||||||||||    
T  26928223 tcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgat 26928124  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  26928123 ttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 33386280 - 33386146
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  33386280 tcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 33386181  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| | ||||||||||||||||||||    
T  33386180 ttctctgttctttcggaccacaaatttgaagccaa 33386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 7782586 - 7782703
Alignment:
Q  34 caaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaga 133  Q
    |||||||||||||||||| ||||||||||| | ||||||| ||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||    
T  7782586 caaatcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctaga 7782685  T
Q  134 ccacaaatttgaagccaa 151  Q
    ||||||||||||||||||    
T  7782686 ccacaaatttgaagccaa 7782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 27352223 - 27352081
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| |    |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  27352223 tcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 27352124  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    || |||||||||| ||||||||||||| |||| ||||||||||    
T  27352123 ttttctgttcttcgagaccacaaatttaaagctaatatcaaca 27352081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 37408178 - 37408045
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||||||||| |  ||||||| ||||||||  |||||||||| | ||||||||||||  | ||||||||||||||||||| |||||||||||||||    
T  37408178 tcgtgtcacgatttacacaatcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatt 37408079  T
Q  118 tctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||| |||||||||| |||||||||||||||||||    
T  37408078 tctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 3617176 - 3617034
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  3617176 tcgtgtcacgattttcccaaatcgtgacacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacg 3617079  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3617078 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 37726156 - 37726290
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | |||| ||||||||||||||  |||||||||| | ||||||||||| | | |||||||||||||||  |||| ||||||||||||    
T  37726156 tcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacgat 37726255  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||| |||||||||||||||||||    
T  37726256 ttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 27453438 - 27453572
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | || |||| ||||||||||| ||||||| ||| | ||||||||||| | | ||||||||||||||||||||| ||||||||| ||    
T  27453438 tcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaat 27453537  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||| |||| ||||||||||||||||||||||    
T  27453538 ttctctgctctttcagaccacaaatttgaagccaa 27453572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4601185 - 4601331
Alignment:
Q  18 tcgtgtcacgatttccca--aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    ||||||||||||||||||  ||||||| |||||||| |||||| ||||| | |||||||||||| || ||||||||||| |||| |||||||||||||||    
T  4601185 tcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcac 4601282  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 162  Q
    |||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  4601283 gatttccctgttcttccaaaccacaaatttgaagacaatctcaacacaa 4601331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 25637155 - 25637013
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||| || |||| ||||||||||||||||||||| ||||||||||||    
T  25637155 tcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctctcg-cacctcgaaatcgtgtcacgatgccacaatcgtgtcacg 25637058  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  25637057 atttccctgttcttccagaccacaaatttaaagacaatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 4598964 - 4599107
Alignment:
Q  18 tcgtgtcacgatttccca--aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    ||||||||||||||||||  ||||||| |||||||| |||||| ||||| | |||||||||||| || ||||||||||| |||| |||||||||||||||    
T  4598964 tcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcac 4599061  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4599062 gatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 6718411 - 6718331
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6718411 tcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 45282708 - 45282628
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45282708 tcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 2671207 - 2671111
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||    
T  2671207 tcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10055948 - 10055817
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  10055948 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 10055851  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  10055850 gatttccctgttcttccaaaccacaaatttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10058170 - 10058039
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  10058170 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 10058073  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  10058072 gatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10060392 - 10060261
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  10060392 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 10060295  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  10060294 gatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10062614 - 10062483
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  10062614 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 10062517  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  10062516 gatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10064836 - 10064705
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  10064836 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 10064739  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  10064738 gatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10067058 - 10066927
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||    
T  10067058 tcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcac 10066961  T
Q  114 gatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||| ||||||||||| |||||||||||||||    
T  10066960 gatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 10208921 - 10208775
Alignment:
Q  18 tcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 113  Q
    |||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||     
T  10208921 tcgtgtcacgattttcccaaaatcgtgccacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcat 10208824  T
Q  114 gatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 162  Q
    |||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  10208823 gatttccctgttcttccaaaccacaaatttgaagacaatctcaacacaa 10208775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 8738599 - 8738539
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 162  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 8738539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 9090837 - 9090777
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 162  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 9090777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 2672561 - 2672427
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||| ||||| | ||||  ||||||||||||  |||||||||| ||||    
T  2672561 tcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccggcatctccga--tcgtgtcacgattacaaaatcgtgacacg 2672464  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||| |||||||||||||||||||||||||||||||||    
T  2672463 attcctctgttcttccagaccacaaatttgaagccaa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 36029640 - 36029711
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||| |||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36029640 aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 36029711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 2676649 - 2676583
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2676649 atcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 10211054 - 10210978
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  10211054 aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 30709316 - 30709264
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 27974493 - 27974442
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 27974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 32143868 - 32143919
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 21711768 - 21711818
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 6718345 - 6718288
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 45282642 - 45282585
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 16264896 - 16264948
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatat 16264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 32143804 - 32143884
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||| | | |||||||||||||||    
T  32143804 tcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 32475997 - 32476064
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32475997 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 32480855 - 32480922
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32480855 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 27038588 - 27038658
Alignment:
Q  82 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||| ||   |||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  27038588 gaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaat 27038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 39032075 - 39032025
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 16498694 - 16498637
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  16498694 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 27986081 - 27986001
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||| | || |||||||||||||||| ||||||||||| | ||||||||||| | | |||||||||||||||    
T  27986081 tcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 35926057 - 35926108
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 1730959 - 1730916
Alignment:
Q  109 gtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 48438782 - 48438833
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 153  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 27986017 - 27985971
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 146  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 40592302 - 40592252
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 8512685 - 8512820
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  |||  | |||||||||||   |||||||||| |||||    
T  8512685 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctga-tcgtgtcacgactgcaaaatcgtgacacga 8512783  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||||||| ||| ||||| ||||||||| ||||    
T  8512784 ttcctctgttctcccaaaccactaatttgaagtcaat 8512820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 24694706 - 24694654
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 153  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  24694706 aaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 8738665 - 8738603
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacc 79  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||    
T  8738665 tcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcacc 8738603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 9090903 - 9090841
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacc 79  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||    
T  9090903 tcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcacc 9090841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 24968562 - 24968697
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||| ||  ||||||  ||||||||||||  | |||||||| ||||    
T  24968562 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccga--tcgtgtcacgattgccaaatcgtgacacg 24968659  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| || |||||||||| ||||| ||||||||| ||||    
T  24968660 attcctttgttcttccaaaccactaatttgaagtcaat 24968697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 40735063 - 40735018
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 147  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 47923371 - 47923326
Alignment:
Q  108 tgtcacgatttctctgttcttccagaccacaaatttgaagccaata 153  Q
    |||||||||||||||||| || || |||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 40845220 - 40845266
Alignment:
Q  101 aaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 147  Q
    ||||||||||||||||||||||||||| ||| | || ||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaag 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 22172897 - 22172864
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattt 51  Q
    ||||| ||||||||||||||||||||||||||||    
T  22172897 tcgtgccacgatttcccaaatcgtgtcacgattt 22172864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 32475929 - 32475966
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgc 54  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32475929 tcgtgtcacgatttcccaagatcgtgtcacgattttgc 32475966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 32480787 - 32480824
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgc 54  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  32480787 tcgtgtcacgatttcccaagatcgtgtcacgattttgc 32480824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 43404486 - 43404515
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttcca 131  Q
    ||||||||||||||||||||||||||||||    
T  43404486 aaatcgtgtcacgatttctctgttcttcca 43404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 9634816 - 9634856
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctg 123  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  9634816 aaatcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 9296004 - 9295862
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  9296004 tcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 9295905  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9295904 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 14291983 - 14292125
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  14291983 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgat 14292082  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14292083 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 14292125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 11098529 - 11098387
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  11098529 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgat 11098430  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11098429 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 25410123 - 25410257
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | | ||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  25410123 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 25410222  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  25410223 ttctctgttcttccagaccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 30833064 - 30832930
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||| |||| || |||||||||    
T  30833064 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgat 30832965  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  30832964 ttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 3492234 - 3492368
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||| ||    
T  3492234 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaat 3492333  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| ||||||||||||||||||||||    
T  3492334 ttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 4484800 - 4484910
Alignment:
Q  37 atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacca 136  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4484800 atcgtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagacca 4484899  T
Q  137 caaatttgaag 147  Q
    |||||||||||    
T  4484900 caaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 32289291 - 32289157
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| ||||||||| ||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  32289291 tcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 32289192  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  32289191 ttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 39811619 - 39811477
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| || ||| ||||   |  |||||||||||||||||||||||||||||||||||    
T  39811619 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 39811520  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39811519 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 6266417 - 6266287
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| | |||||| ||||||||||| |||| ||||||||||||    
T  6266417 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgat 6266318  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    |||  ||||||||||||||||||||||||||    
T  6266317 ttccatgttcttccagaccacaaatttgaag 6266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 40739334 - 40739448
Alignment:
Q  37 atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacca 136  Q
    ||||||||||||||| ||||||||||| | |||||||||||   | ||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40739334 atcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagacca 40739433  T
Q  137 caaatttgaagccaa 151  Q
    |||||||||||||||    
T  40739434 caaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 44310548 - 44310471
Alignment:
Q  82 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310548 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 12647825 - 12647967
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  12647825 tcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacg 12647922  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12647923 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 32247229 - 32247352
Alignment:
Q  36 aatcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||| |||||||||||| || |||| || | ||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32247229 aatcgtgccacgattttgcatccagcaaacttggctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagac 32247327  T
Q  135 cacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||    
T  32247328 cacaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 8389681 - 8389629
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 8389629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 10706783 - 10706731
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatat 10706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 36757477 - 36757425
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 21630511 - 21630562
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 153  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 28258729 - 28258678
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaa 28258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 39483443 - 39483494
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 153  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaata 39483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 33528155 - 33528105
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  108 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 23078002 - 23077950
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatat 23077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 19344867 - 19345002
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| || ||||||||  || |||| || | ||||||||| | ||||  |||| |||||||  | |||||| | ||||    
T  19344867 tcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcacggcatctccga--tcgtatcacgattgccaaatcgcgacacg 19344964  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  19344965 attcctctgttcttccaaaccacaaatttgaagccaat 19345002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 19349725 - 19349860
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  | |||| | | ||||    
T  19349725 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgccaaattgcgacacg 19349822  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| |||||||||||||| |||||    
T  19349823 attcctctgttcttccaaaccacaaatttgaaaccaat 19349860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 13569896 - 13569948
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 154  Q
    ||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  13569896 aaatcatgtcatgatttttctgttctttcaaaccacaaatttgaagccaatat 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 7450901 - 7450869
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgatt 50  Q
    |||||||||| ||||||||||||||||||||||    
T  7450901 tcgtgtcacgttttcccaaatcgtgtcacgatt 7450869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 28258793 - 28258713
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||||| |||| | ||| ||||||||  |||||||||| | |||||||||||   | |||||||||||||||    
T  28258793 tcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 9166 - 9299
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  9166 tcgtgtcacgatttcccaaatcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatt 9265  T
Q  118 tctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||||||||||||||||||||    
T  9266 tctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 11611 - 11744
Alignment:
Q  18 tcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||||||||||| |||||||||||||    
T  11611 tcgtgtcacgatttcccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatt 11710  T
Q  118 tctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||| |||||||||||    
T  11711 tctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 17571 - 17440
Alignment:
Q  21 tgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 119  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  17571 tgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 17472  T
Q  120 tctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||||||||||||||||||    
T  17471 tctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 5e-49; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 20622678 - 20622808
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  20622678 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgat 20622777  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  20622778 ttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 21053682 - 21053540
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  21053682 tcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgat 21053583  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  21053582 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 9036145 - 9036003
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||  |||| | ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9036145 tcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgat 9036046  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||    
T  9036045 ttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 24202376 - 24202260
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24202376 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 24202277  T
Q  135 cacaaatttgaagccaa 151  Q
    |||||||||||||||||    
T  24202276 cacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 19361055 - 19360921
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||    
T  19361055 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgat 19360956  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||| ||||||||||||||||||||||    
T  19360955 ttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 19365911 - 19365781
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  19365911 tcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 19365812  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    |||||||||||| ||||||||||||||||||    
T  19365811 ttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 40282101 - 40281971
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  40282101 tcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgat 40282002  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| || ||||||||||||||||||||||||    
T  40282001 ttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 51765133 - 51764999
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||| |||| ||||||||||||    
T  51765133 tcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgat 51765034  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||||||||||||| |||||||    
T  51765033 ttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 41391047 - 41391185
Alignment:
Q  21 tgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 119  Q
    |||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||| | | ||||||||||||||| |||||||||||||||||||||    
T  41391047 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttc 41391145  T
Q  120 tctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  41391146 tctgttcttccagaccacaaatttgaagccaaaatcaaca 41391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 44023519 - 44023377
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||||||||||||||||    
T  44023519 tcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacga 44023421  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  44023420 tttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 9986928 - 9986798
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||  | ||||||||||||| ||||||||||| |||||| |||| ||||||||||||    
T  9986928 tcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgat 9986829  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    ||| |||||||||||||||||||||||||||    
T  9986828 ttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 39445940 - 39446082
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    |||||||| |||||||||| |||||| |||||||| ||  ||||||| || | ||||||||| | | ||||||||||||||| |||||||||||||||||    
T  39445940 tcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacga 39446038  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  39446039 tttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 25439541 - 25439406
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||| || | ||||||||| | | |||||||||||||||  | ||||||||||||||    
T  25439541 tcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcacggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacga 25439443  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||||||||||||||||||||||||||||||||    
T  25439442 ttgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 44203360 - 44203218
Alignment:
Q  18 tcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||||| | || |||||||||||| ||||||||||||||||    
T  44203360 tcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacg 44203263  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44203262 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 1054656 - 1054514
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| || | ||||||||||| | || |||| ||||||| ||||||||||| |||||    
T  1054656 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcacctccaa-tcgtatcacgattccaaaatcgtgacacga 1054558  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  1054557 tttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 25444734 - 25444599
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||| ||| ||| || | ||||||||| | | |||||||||||||||  | ||||||||||||||    
T  25444734 tcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcacggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacga 25444636  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||||||||||||||||||||||||||||||||    
T  25444635 ttgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 13604220 - 13604108
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    |||||||||||||||||  ||| |||||| | |||||||| || | | |||||||| |||||| ||| ||||||||||||||||||||||||||||| ||    
T  13604220 aaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaac 13604121  T
Q  135 cacaaatttgaag 147  Q
    |||||||||||||    
T  13604120 cacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 24793723 - 24793663
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacacaa 24793663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 41398764 - 41398821
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaatcaaca 41398821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 21536189 - 21536121
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||| ||   |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 26644516 - 26644381
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    |||||||||| |||| |||| ||||| ||||||||  |||| ||||| | |||||| | ||   | ||||||||| |||||| ||||||||| |||||||    
T  26644516 tcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacgat 26644417  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaat 152  Q
    | ||||||||||||| ||||||||||| ||||||||    
T  26644416 tcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 13598967 - 13599017
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 16647900 - 16647854
Alignment:
Q  159 acaatggtacagggtgtggagtttttaggggagaaagtgggtagcta 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16647900 acaatggtacagggtgtggagtttttaggggagaaagtgggtagcta 16647854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 37070334 - 37070384
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaat 37070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 13659840 - 13659897
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  13659840 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 3282273 - 3282322
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaa 3282322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 16124238 - 16124188
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||| |||||||||||||||||||||| ||||||||||| || |||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 24786967 - 24786905
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacc 79  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||    
T  24786967 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 24786905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 24793789 - 24793727
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacc 79  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||    
T  24793789 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 24793727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 41398699 - 41398778
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 97  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||| | | |||||||||||||||    
T  41398699 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctc-aaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 43988023 - 43987956
Alignment:
Q  85 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||  | |||||| | ||||||| ||||| ||| ||| ||||||||||||||||||||    
T  43988023 atcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaat 43987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 29652381 - 29652418
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaa 139  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  29652381 aaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 1192328 - 1192296
Alignment:
Q  82 gaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||||||||||| |||||    
T  1192328 gaaatcgtgtcacgatgccaaaatcgtatcacg 1192296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 22082 - 21948
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  22082 tcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccgat 21983  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||||||||||||||||||||||||||| ||||    
T  21982 ttctctgttcttccagaccacaaatttgaaaccaa 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 3479 - 3337
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  ||| ||| ||||||||||||  |  ||||||||||||||||| |||||||||||||||||    
T  3479 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgat 3380  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  3379 ttctcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 8036 - 7920
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    ||||||||||||||||| ||||||||||| | | ||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  8036 aaatcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 7937  T
Q  135 cacaaatttgaagccaa 151  Q
    |||||||||||||||||    
T  7936 cacaaatttgaagccaa 7920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 803 - 945
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||||||||||||||||    
T  803 tcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacga 901  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||| |||||||||||||||||||| ||||||    
T  902 tttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 34696 - 34554
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||||||| |||||| |||||||| ||  | ||||| | | || |||||  |  ||||| |||||||||||||||||||||||||||||    
T  34696 tcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgat 34597  T
Q  117 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34596 ttctctgttcttccagaccacaaatttgaagccaatatcaaca 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 3043 - 3186
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||    
T  3043 tcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacg 3140  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||    
T  3141 atttccctgttcttccagaccacaaatttgaagacaatctcaacac 3186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 625 - 519
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  625 tcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 526  T
Q  117 ttctctg 123  Q
    |||||||    
T  525 ttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 1784 - 1707
Alignment:
Q  84 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaca 161  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacaca 1707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 4168 - 4310
Alignment:
Q  18 tcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||| | ||||||||||||||   ||||||||||||||| ||||||||||| ||||    
T  4168 tcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcaccta-aaatcgtgtcacgattccaaaatcgtggcacg 4265  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4266 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 6002 - 5859
Alignment:
Q  18 tcgtgtcacgattt--cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||  ||  ||||||| ||||| |||||||||||||| | |||||||||||||| | || |||||||||||  ||||||||||| ||||    
T  6002 tcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgactccaaaatcgtggcacg 5904  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5903 atttccctgttcttccagaccacaaatttgaagacaatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 61; Significance: 2e-26; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 132877 - 132765
Alignment:
Q  35 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 134  Q
    |||||||||||||||||  ||| |||||| | |||||||| || | | |||||||| |||||| ||| ||||||||||||||||||||||||||||| ||    
T  132877 aaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaac 132778  T
Q  135 cacaaatttgaag 147  Q
    |||||||||||||    
T  132777 cacaaatttgaag 132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 6252 - 6302
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 3060 - 3110
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 149601 - 149658
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  149601 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 8216 - 8274
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacac 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 43574 - 43443
Alignment:
Q  21 tgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 119  Q
    |||||||||||| |||| ||||  ||||||||  ||||||| || | |||||||| ||   | ||||||||||||||||||| |||||||||||||||||    
T  43574 tgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcacgatgccacaatcgtgtcacgatttc 43475  T
Q  120 tctgttcttccagaccacaaatttgaagccaa 151  Q
    ||| |||||||| |||| ||||||||||||||    
T  43474 tctattcttccaaaccataaatttgaagccaa 43443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 36384 - 36332
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaat 36332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 1226 - 1096
Alignment:
Q  18 tcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 116  Q
    ||||||||||||||| |||| ||||  ||||||||  |||||||||| | | ||||||  |   | ||||||||||||||||||||||||||||||||||    
T  1226 tcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgat 1127  T
Q  117 ttctctgttcttccagaccacaaatttgaag 147  Q
    || ||||||||| || |||||||||||||||    
T  1126 ttttctgttctttcaaaccacaaatttgaag 1096  T

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Target: scaffold0098 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 45744 - 45795
Alignment:
Q  100 caaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 151  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 45795  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 176592 - 176450
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  |||  | |||||||||||   |||||||||| |||||    
T  176592 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctga-tcgtgtcacgactgcaaaatcgtgacacga 176494  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 159  Q
    || ||||||||| ||| ||||| ||||||||| ||||| |||||    
T  176493 ttcctctgttctcccaaaccactaatttgaagtcaataccaaca 176450  T

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Target: scaffold0259 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 1881 - 1746
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||| ||  ||||||  ||||||||||||  | |||||||| ||||    
T  1881 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccga--tcgtgtcacgattgccaaatcgtgacacg 1784  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||| ||||||||| ||||    
T  1783 attcctctgttcttccaaaccactaatttgaagtcaat 1746  T

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Target: scaffold0197 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 18806 - 18671
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  | ||||  ||||||||||||  | |||||| | ||||    
T  18806 tcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccga--tcgtgtcacgattgccaaatcgcgacacg 18709  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||| ||| ||||||||||||||||||||    
T  18708 attcctctgttctcccaaaccacaaatttgaagccaat 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 13926 - 13791
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 115  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  |||  | |||||||||||   |||||||||| |||||    
T  13926 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcctccctga-tcgtgtcacgactgcaaaatcgtgacacga 13828  T
Q  116 tttctctgttcttccagaccacaaatttgaagccaat 152  Q
    || ||||||||| ||| ||||| ||||||||| ||||    
T  13827 ttcctctgttctcccaaaccactaatttgaagtcaat 13791  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 148586 - 148451
Alignment:
Q  18 tcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 114  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||| ||  ||||||  ||||||||||||  | |||||||| ||||    
T  148586 tcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccga--tcgtgtcacgattgccaaatcgtgacacg 148489  T
Q  115 atttctctgttcttccagaccacaaatttgaagccaat 152  Q
    ||| ||||||||||||| ||||| ||||||||| ||||    
T  148488 attcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 86153 - 86206
Alignment:
Q  102 aaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaatat 154  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatat 86206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 6784 - 6750
Alignment:
Q  83 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 117  Q
    |||||||| ||||||||||||||||||||||||||    
T  6784 aaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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