View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17158_low_43 (Length: 262)
Name: NF17158_low_43
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17158_low_43 |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 7712932 - 7713177
Alignment:
| Q |
9 |
caagtatctttcttggtgctcgggcaggagttgttgcctatcaggttagccctaaaataagatattattgttccgatatcatgttgtgttgtgttatatg |
108 |
Q |
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| T |
7712932 |
caagtatctttcttggtgctcgggcaggagttgttgcctatcaggttagccctaaaataagatattattgttccgatatcatgttgtgttgtgttatatg |
7713031 |
T |
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| Q |
109 |
aagtactaacatggacacggataacagacatgataccaacactgacacatagagagataacaatgcaggagtcctctttcttgttgggccttcggtacat |
208 |
Q |
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| T |
7713032 |
aagtactgacatggacacggataacagacacgataccaacactgacatatagagagataccaatgcaggagtcctctttcttgtttggccttcggtacat |
7713131 |
T |
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| Q |
209 |
tgtcgcaactttgtctctttatgatgaatatagtaatgatattctt |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7713132 |
tgtcgcaactttgtctctttatgatgaatatagtaatgatgttctt |
7713177 |
T |
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