View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17158_low_49 (Length: 250)
Name: NF17158_low_49
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17158_low_49 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 35 - 250
Target Start/End: Complemental strand, 45889416 - 45889201
Alignment:
| Q |
35 |
attaatatgacattaaatctaaatttaatctttgatctgaatattttcgatgatacaccaatttgtgtatgtttgcttggatggagggtcttgcgtttgt |
134 |
Q |
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| T |
45889416 |
attaatatgacattaaatctgaatttaatctttgatctgaatattttcgatgatacaccaatttgtgtatgtttgcttggatggagggtcttgcgtttgt |
45889317 |
T |
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| Q |
135 |
caaactcatggtgttactgcgagattataaaaattatggtggctttgatttagtagaagttataaaatgtaacttttgtttttgttaaaattacggattt |
234 |
Q |
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| T |
45889316 |
caaactcatggtgttactgcgagattatataaattatggtggctttgatttagtagatgttataaaatgtaacttttgtttttgttaaaattacggattt |
45889217 |
T |
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| Q |
235 |
attatgattttgagtt |
250 |
Q |
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| T |
45889216 |
attatgattttgagtt |
45889201 |
T |
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