View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17158_low_51 (Length: 248)
Name: NF17158_low_51
Description: NF17158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17158_low_51 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13715530 - 13715300
Alignment:
| Q |
1 |
cacctcacaattttggaattggctcagcaacaatataaatcaacctctcgacctatcatcttgggatattccgctgcattgctcgtagaatgtttggagc |
100 |
Q |
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| T |
13715530 |
cacctcacaattttggaattggctcagcaacaatataaatcaacctctcgacctatcatcttgggatattccgctacattgctcgtagaatgtttggagc |
13715431 |
T |
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| Q |
101 |
cctccagtgaaacaaatcatgctttctgccaagcttcatactatttggattatttgggttgaacaaaacaaacaacgcttttccaatgagaacaattcca |
200 |
Q |
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| T |
13715430 |
cctccagtgaaacaaatcatgctttctgccaagcttcat---------attatttgggttgaacaaaacagacaacgcttttccaatgagaacaattcca |
13715340 |
T |
|
| Q |
201 |
tgcaaagcctttttcacaagcttatttatgaagttcatct |
240 |
Q |
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| T |
13715339 |
tgcaaagcctttttcacaagcttatttatgaagttcatct |
13715300 |
T |
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