View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1715_high_129 (Length: 299)

Name: NF1715_high_129
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1715_high_129
NF1715_high_129
[»] chr4 (37 HSPs)
chr4 (1-287)||(30167373-30167659)
chr4 (1-282)||(8255013-8255295)
chr4 (1-282)||(8268431-8268713)
chr4 (1-287)||(30964427-30964710)
chr4 (2-242)||(4305712-4305951)
chr4 (1-248)||(31050509-31050757)
chr4 (179-287)||(8705952-8706061)
chr4 (43-287)||(35341148-35341391)
chr4 (1-248)||(2825769-2826015)
chr4 (1-84)||(53823433-53823516)
chr4 (26-129)||(25753183-25753285)
chr4 (3-84)||(22811172-22811253)
chr4 (211-276)||(20464786-20464852)
chr4 (26-84)||(21387216-21387274)
chr4 (1-84)||(19815236-19815319)
chr4 (1-84)||(46698797-46698880)
chr4 (1-67)||(39421042-39421108)
chr4 (23-75)||(38637253-38637305)
chr4 (26-85)||(36962627-36962685)
chr4 (26-85)||(39041285-39041344)
chr4 (26-84)||(6599957-6600015)
chr4 (26-76)||(35800500-35800550)
chr4 (26-84)||(38929838-38929896)
chr4 (26-80)||(40813797-40813851)
chr4 (1-118)||(19673087-19673202)
chr4 (37-84)||(2792286-2792333)
chr4 (26-75)||(2061759-2061808)
chr4 (30-75)||(16501746-16501791)
chr4 (26-74)||(49747538-49747586)
chr4 (45-84)||(28966897-28966936)
chr4 (26-61)||(53756767-53756802)
chr4 (1-75)||(19311364-19311436)
chr4 (39-81)||(41117982-41118024)
chr4 (37-82)||(2165529-2165574)
chr4 (26-59)||(37707392-37707425)
chr4 (177-248)||(19673259-19673331)
chr4 (30-70)||(26474851-26474891)
[»] chr8 (31 HSPs)
chr8 (1-281)||(31207176-31207457)
chr8 (9-287)||(24995202-24995482)
chr8 (1-278)||(9519485-9519764)
chr8 (1-287)||(37986666-37986953)
chr8 (37-287)||(20138448-20138700)
chr8 (1-271)||(32066119-32066390)
chr8 (1-281)||(34388821-34389100)
chr8 (1-248)||(12898123-12898369)
chr8 (23-287)||(41893210-41893473)
chr8 (1-287)||(16457283-16457555)
chr8 (1-225)||(36630823-36631047)
chr8 (1-245)||(15821230-15821474)
chr8 (122-215)||(22773606-22773699)
chr8 (46-278)||(38577606-38577840)
chr8 (30-84)||(10248565-10248619)
chr8 (1-84)||(17657014-17657097)
chr8 (1-84)||(30236140-30236223)
chr8 (26-84)||(15906697-15906755)
chr8 (215-287)||(22773815-22773888)
chr8 (39-84)||(32945715-32945760)
chr8 (207-287)||(35821432-35821513)
chr8 (26-72)||(10552279-10552325)
chr8 (26-84)||(12198081-12198139)
chr8 (26-84)||(12442509-12442567)
chr8 (40-84)||(3679471-3679515)
chr8 (26-70)||(23264717-23264761)
chr8 (139-182)||(35821378-35821421)
chr8 (26-64)||(33967337-33967375)
chr8 (26-72)||(35062468-35062514)
chr8 (26-64)||(40531243-40531281)
chr8 (251-287)||(36631061-36631097)
[»] chr1 (36 HSPs)
chr1 (2-287)||(46692627-46692913)
chr1 (1-287)||(5459147-5459434)
chr1 (1-287)||(5389230-5389516)
chr1 (1-287)||(24449738-24450025)
chr1 (1-247)||(31585608-31585855)
chr1 (1-287)||(41920438-41920730)
chr1 (1-200)||(30685800-30685999)
chr1 (1-276)||(27031660-27031935)
chr1 (1-219)||(24684355-24684573)
chr1 (1-276)||(46814286-46814562)
chr1 (1-245)||(7857639-7857883)
chr1 (1-248)||(24658915-24659161)
chr1 (110-248)||(6764229-6764367)
chr1 (1-94)||(20113523-20113616)
chr1 (1-84)||(17033572-17033655)
chr1 (26-127)||(19598647-19598747)
chr1 (1-75)||(6583237-6583311)
chr1 (214-287)||(6804739-6804813)
chr1 (1-75)||(9313310-9313384)
chr1 (11-76)||(27905408-27905473)
chr1 (26-75)||(38544759-38544808)
chr1 (37-84)||(27102213-27102260)
chr1 (26-84)||(15840924-15840982)
chr1 (223-287)||(30685732-30685797)
chr1 (2-94)||(34774858-34774950)
chr1 (1-69)||(42374149-42374217)
chr1 (26-69)||(4651791-4651834)
chr1 (29-84)||(32864573-32864628)
chr1 (28-69)||(42374049-42374090)
chr1 (26-70)||(30655571-30655615)
chr1 (32-74)||(9081527-9081569)
chr1 (26-64)||(17891522-17891560)
chr1 (26-76)||(22200019-22200069)
chr1 (25-75)||(46603402-46603452)
chr1 (30-59)||(18787241-18787270)
chr1 (239-287)||(31584845-31584894)
[»] chr7 (43 HSPs)
chr7 (1-287)||(38306247-38306534)
chr7 (1-281)||(37794975-37795256)
chr7 (1-287)||(47325693-47325980)
chr7 (1-287)||(5860096-5860383)
chr7 (37-287)||(44353371-44353623)
chr7 (1-281)||(10244168-10244449)
chr7 (1-287)||(3419463-3419751)
chr7 (1-277)||(3867102-3867379)
chr7 (1-243)||(33435095-33435337)
chr7 (1-275)||(41089569-41089843)
chr7 (1-287)||(25160801-25161084)
chr7 (3-248)||(34389950-34390195)
chr7 (146-287)||(31971942-31972084)
chr7 (1-136)||(6584895-6585031)
chr7 (1-248)||(35745670-35745922)
chr7 (171-287)||(3419204-3419321)
chr7 (208-287)||(40726313-40726392)
chr7 (28-248)||(8745166-8745387)
chr7 (1-135)||(3478338-3478471)
chr7 (25-84)||(13311849-13311908)
chr7 (1-84)||(16954639-16954722)
chr7 (1-84)||(24324810-24324893)
chr7 (26-84)||(6716748-6716806)
chr7 (1-84)||(11379139-11379222)
chr7 (1-84)||(1320780-1320863)
chr7 (177-278)||(6585043-6585146)
chr7 (1-84)||(16828948-16829031)
chr7 (26-69)||(38485567-38485610)
chr7 (1-84)||(42533264-42533347)
chr7 (26-72)||(9349760-9349806)
chr7 (30-84)||(12480901-12480955)
chr7 (26-64)||(27993568-27993606)
chr7 (26-84)||(47457034-47457092)
chr7 (39-136)||(48161984-48162083)
chr7 (26-84)||(1820014-1820072)
chr7 (26-60)||(25153231-25153265)
chr7 (26-64)||(46262151-46262189)
chr7 (25-73)||(9428128-9428176)
chr7 (27-79)||(17802833-17802885)
chr7 (26-64)||(35206725-35206763)
chr7 (26-72)||(46133302-46133348)
chr7 (11-84)||(23983191-23983264)
chr7 (177-247)||(6716586-6716658)
[»] chr2 (32 HSPs)
chr2 (1-287)||(39338674-39338960)
chr2 (2-287)||(10524084-10524373)
chr2 (1-287)||(387159-387447)
chr2 (55-281)||(17116693-17116920)
chr2 (1-278)||(7874277-7874554)
chr2 (1-275)||(14106342-14106619)
chr2 (26-247)||(14405209-14405431)
chr2 (26-278)||(5254267-5254515)
chr2 (175-278)||(7460835-7460940)
chr2 (1-84)||(1269469-1269552)
chr2 (26-84)||(22885145-22885203)
chr2 (26-94)||(4471934-4472002)
chr2 (1-84)||(13337260-13337343)
chr2 (26-84)||(16959993-16960051)
chr2 (26-127)||(15126380-15126480)
chr2 (26-248)||(10173428-10173648)
chr2 (30-80)||(9560804-9560854)
chr2 (1-75)||(25504930-25505004)
chr2 (27-84)||(2062901-2062958)
chr2 (26-75)||(33788653-33788702)
chr2 (36-84)||(7695984-7696032)
chr2 (45-248)||(16952232-16952434)
chr2 (45-248)||(17022897-17023099)
chr2 (45-248)||(17060203-17060405)
chr2 (26-64)||(4162052-4162090)
chr2 (26-74)||(23650396-23650444)
chr2 (39-83)||(42048229-42048273)
chr2 (45-84)||(17079199-17079238)
chr2 (26-72)||(31902438-31902484)
chr2 (37-127)||(34230223-34230312)
chr2 (26-84)||(36276184-36276241)
chr2 (1-59)||(41086825-41086883)
[»] chr3 (33 HSPs)
chr3 (1-281)||(2392320-2392601)
chr3 (1-282)||(20611769-20612050)
chr3 (1-287)||(34475564-34475849)
chr3 (46-287)||(47235729-47235971)
chr3 (1-282)||(45163839-45164123)
chr3 (22-272)||(17550964-17551210)
chr3 (1-281)||(31482870-31483150)
chr3 (1-287)||(19176488-19176777)
chr3 (1-281)||(2394084-2394348)
chr3 (12-287)||(43012372-43012648)
chr3 (1-287)||(9583863-9584148)
chr3 (62-287)||(53247947-53248174)
chr3 (1-278)||(40023389-40023667)
chr3 (1-248)||(23328198-23328445)
chr3 (1-248)||(45398782-45399029)
chr3 (176-287)||(30352249-30352359)
chr3 (1-84)||(14193926-14194009)
chr3 (26-135)||(33143910-33144019)
chr3 (1-84)||(5556556-5556639)
chr3 (26-125)||(47945717-47945815)
chr3 (26-75)||(14755286-14755335)
chr3 (1-84)||(14879421-14879504)
chr3 (26-84)||(30127273-30127332)
chr3 (30-75)||(37123397-37123442)
chr3 (30-75)||(39021297-39021342)
chr3 (26-64)||(20710740-20710778)
chr3 (26-75)||(24099348-24099397)
chr3 (26-83)||(31424247-31424304)
chr3 (32-84)||(1652898-1652950)
chr3 (37-84)||(823447-823494)
chr3 (1-84)||(25647670-25647753)
chr3 (26-84)||(2782081-2782139)
chr3 (26-84)||(19295877-19295935)
[»] chr5 (27 HSPs)
chr5 (4-287)||(18593232-18593516)
chr5 (3-275)||(34378086-34378359)
chr5 (1-267)||(698347-698614)
chr5 (1-287)||(29087467-29087752)
chr5 (143-287)||(7161824-7161969)
chr5 (87-287)||(18313451-18313651)
chr5 (1-75)||(7392052-7392126)
chr5 (60-136)||(7162276-7162353)
chr5 (1-84)||(7195251-7195334)
chr5 (26-84)||(22675336-22675394)
chr5 (26-84)||(13954246-13954304)
chr5 (27-75)||(39184208-39184256)
chr5 (26-73)||(23426355-23426402)
chr5 (1-127)||(24072237-24072361)
chr5 (1-75)||(8730903-8730977)
chr5 (26-160)||(14302368-14302500)
chr5 (30-80)||(21402853-21402903)
chr5 (26-84)||(26045976-26046034)
chr5 (26-75)||(33258903-33258952)
chr5 (45-84)||(8297498-8297537)
chr5 (3-74)||(25991995-25992066)
chr5 (26-84)||(27713080-27713138)
chr5 (28-84)||(28765614-28765670)
chr5 (1-84)||(17854079-17854162)
chr5 (37-72)||(31721699-31721734)
chr5 (30-68)||(12046270-12046308)
chr5 (44-84)||(39024462-39024502)
[»] chr6 (19 HSPs)
chr6 (1-287)||(3117479-3117766)
chr6 (150-287)||(10541967-10542105)
chr6 (169-281)||(14663231-14663344)
chr6 (1-93)||(16510304-16510396)
chr6 (26-84)||(32935351-32935409)
chr6 (26-73)||(26216042-26216089)
chr6 (1-135)||(20701765-20701898)
chr6 (31-84)||(13423482-13423535)
chr6 (26-73)||(26534742-26534789)
chr6 (30-81)||(34105428-34105479)
chr6 (1-75)||(9224027-9224101)
chr6 (26-61)||(7546464-7546499)
chr6 (39-84)||(33968625-33968670)
chr6 (40-84)||(32316393-32316437)
chr6 (26-70)||(34090374-34090418)
chr6 (26-84)||(34092806-34092864)
chr6 (29-70)||(21266127-21266168)
chr6 (26-62)||(12129228-12129264)
chr6 (26-73)||(12794125-12794173)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-287)||(35583-35866)
[»] scaffold0343 (1 HSPs)
scaffold0343 (57-287)||(5747-5979)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-129)||(19369-19496)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-84)||(42150-42233)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-81)||(36693-36773)
[»] scaffold1613 (1 HSPs)
scaffold1613 (26-75)||(1038-1087)
[»] scaffold0620 (2 HSPs)
scaffold0620 (26-81)||(3841-3896)
scaffold0620 (26-84)||(8140-8198)
[»] scaffold0172 (1 HSPs)
scaffold0172 (211-277)||(19113-19177)
[»] scaffold0236 (1 HSPs)
scaffold0236 (45-85)||(10412-10452)


Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 30167659 - 30167373
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||||  ||||||||||||||||  ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30167659 gggtgccctgcctatttggtattatagtcaagtgggtcgatcacttttgattcgagatcgggagtcggttctttgactcaagttgatttttggggtttgt 30167560  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  30167559 gttgtgctctttcggtggtccggaggtcgcgaggtttatgatagctgcatgacccttcggttaagcgctcttcgaaatgtggcccaacttgggtgttggg 30167460  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30167459 gtatgggagttttattttgagggtgttctttgtgggtgagtggtgacgttggcggtggtggataccgtgtttacagtgcttgatttt 30167373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 8255013 - 8255295
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||    
T  8255013 gggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttgactcaagttggtttttgggctttgt 8255112  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
     ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||| | |||||||| |||||||||||||||||||||| ||    
T  8255113 tttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggtgctcttcgtaatgtggctcagcttgggtgttagg 8255212  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttg 282  Q
    || || |||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||| ||||||||||||||||    
T  8255213 gtctgtgagttttattttgagggtgttctttgtgggtgagtagtgacgatgggatgtggtggatactgtgtttacagtgcttg 8255295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 8268431 - 8268713
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||    
T  8268431 gggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttgactcaagttggtttttgggctttgt 8268530  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
     ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||| | |||||||| |||||||||||||||||||||| ||    
T  8268531 tttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggtgctcttcgtaatgtggctcagcttgggtgttagg 8268630  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttg 282  Q
    || || |||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||| ||||||||||||||||    
T  8268631 gtctgtgagttttattttgagggtgttctttgtgggtgagtagtgacgatgggatgtggtggatactgtgtttacagtgcttg 8268713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 30964427 - 30964710
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| |||| |||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||    
T  30964427 gggtgccctgctaatttggtactataatctgatgggccgatcacttttgattcgtgatcgggagtccgttctttgactcaagttggtttttgggttttgt 30964526  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| | ||||||||     |    
T  30964527 gttgtgctcttttggtggttcggaggtcgcgaggtttgtgatagctgcatgatcattcggttaggtgctcttcgaaatgtggccctgcttgggt-----g 30964621  T
Q  201 gta-tgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| | | |||||||||| ||| ||| |||||||||| |||||||    
T  30964622 gtactgggagttttattttgagggtgttctttgtgggtgagtagtgatgatgggcggtggtgaatatcgtatttacagtgcgtgatttt 30964710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 4305712 - 4305951
Alignment:
Q  2 ggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtg 101  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| || ||||||    
T  4305712 ggtgccctgctaatttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttagttctttgtctcaagttggtttttaggctttgtg 4305811  T
Q  102 ttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgggg 201  Q
    ||||||||||| |||||| | |||||||| |||||||||||| ||||||||||||||||| | | |||||||| ||||||||||| ||||||| || |||    
T  4305812 ttgtgctcttttggtggtccagaggtcgcaaggtttgtgataactgcatgatccttcggtgaggtgctcttcg-aatgtggctcaacttgggtatttggg 4305910  T
Q  202 tatgggagttttattttgagggtgttctttgtgggtgagta 242  Q
    | ||||||||||||||| |||||| ||||||||||||||||    
T  4305911 tttgggagttttattttcagggtgatctttgtgggtgagta 4305951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 31050757 - 31050509
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt-- 98  Q
    ||||||||| || |||||||  || |||||||||| ||||||||||||||||||||||||| ||| || ||||||  |  ||||| |||||||| |||      
T  31050757 gggtgccctactgatttggttctaaagtctggtgggccgatcacttttgattcgagatcggaagttaggtctttggtttgagttggtttttgggcttttg 31050658  T
Q  99 gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttg 198  Q
     | |||||||||||| |||| |||||||||| |||| |||||  ||||||||| || |||||||| | ||| |||| | ||||||| |||||||||||||    
T  31050657 tttttgtgctctttcagtggatcggaggtcgagagg-ttgtggaagctgcatgttcattcggttaggagcttttcg-attgtggctaagcttgggtgttg 31050560  T
Q  199 gggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacg 248  Q
      || |||  |||||||||||| |||||||| ||| |||||||||||||||    
T  31050559 aagtctggctgttttattttgaggggtgttccttgggggtgagtagtgacg 31050509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 8706061 - 8705952
Alignment:
Q  179 gtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagt 277  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||| |||||||||||    
T  8706061 gtggctcagcttgggtgttggggtctaagagttttattttgagggtgttctttgtgggtgggtagtgacgatgggcagtggtggatactgtgtttacagt 8705962  T
Q  278 gcttgatttt 287  Q
    ||||| ||||    
T  8705961 gcttgttttt 8705952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 287
Target Start/End: Complemental strand, 35341391 - 35341148
Alignment:
Q  43 acttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt-gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtga 141  Q
    ||||||||| ||||||||| |||||| |||||| ||||||||| |||||||  ||| || ||||||||||||||||| |||||| ||| |||| |||||     
T  35341391 acttttgatccgagatcggaagtcagctctttggctcaagttggtttttggccttttgttttgtgctctttcggtggatcggagttcgagagg-ttgtgg 35341293  T
Q  142 tagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttga-gggtgttctttgtgggtgag 240  Q
     ||||||||| || ||| |||| | ||| |||| |||||||||||| || |||||||  || ||||||||||||||||| ||||||||| || |||||||    
T  35341292 aagctgcatgttcattcagttatgagcttttcg-aatgtggctcag-tttggtgttgaagtttgggagttttattttgaggggtgttctctg-gggtgag 35341196  T
Q  241 tagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||| | || ||| | |||||| |||||||||||| ||| ||||    
T  35341195 tagtgacgatgggtggttgcggatactgtgtttacagtgtttgttttt 35341148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 2825769 - 2826015
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||| ||||| |||||||  || |||| ||||| ||||||| ||||||||||||||||||| |||  |||||| |||||  || ||||||||  |||     
T  2825769 gggtgctctgctgatttggttctaaagtccggtgggccgatcatttttgattcgagatcgggaatcacctctttggctcaatgtggtttttgggctttta 2825868  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | |||| |||||||||||| |||||||||  |||| |||||  ||||||||| || |||||||| | ||| |||| || |||| |||| ||||||||||     
T  2825869 ttttgtactctttcggtggatcggaggtctagagg-ttgtggaagctgcatgttcattcggttaggagcttttcg-aaggtggttcagtttgggtgttga 2825966  T
Q  200 ggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacg 248  Q
     || ||||||||||||||||| ||||||||| || |||||||||||||||    
T  2825967 agtttgggagttttattttgaggggtgttctctg-gggtgagtagtgacg 2826015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 53823516 - 53823433
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  53823516 gggtgcccttctgatttggtcataaagtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggctcaagtt 53823433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 25753183 - 25753285
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggag 125  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||| ||| | ||||  ||||||||||| ||||||    
T  25753183 agtctggtggggcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttgattttgggctttttattgt-ttctttcggtggatcggag 25753281  T
Q  126 gtcg 129  Q
    ||||    
T  25753282 gtcg 25753285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 22811253 - 22811172
Alignment:
Q  3 gtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||| || ||||||| ||| |||||||||| ||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  22811253 gtgcccttctgatttggtcttaaagtctggtgggccgatcattttttattcgagatcgggagtcagttctttggctcaagtt 22811172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 20464786 - 20464852
Alignment:
Q  211 tttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacag 276  Q
    ||||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  20464786 tttattttgagggtgttatttgggggtgagtagtgacgatgggcggtggtggataccgtgtttacag 20464852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 21387274 - 21387216
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||    
T  21387274 agtctggtggaccgatcacttttgattcgagatcggaagtcagttcttcgattcaagtt 21387216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19815319 - 19815236
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| ||  ||||||  || |||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||    
T  19815319 gggtgcccttctgttttggtcctaaagtctggtggaccgattactttttattcgagatcaggagtcagttctttggctcaagtt 19815236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 46698880 - 46698797
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  | ||||||||||| |||||  ||||||||||||||||||||||||||||||||  |||||||    
T  46698880 gggtgcccttctgatttggtcctgtagtctggtgggccgattgcttttgattcgagatcgggagtcagttctttggttcaagtt 46698797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39421108 - 39421042
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtca 67  Q
    ||||||||| || || |||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  39421108 gggtgcccttctgatatggtcttatagcctggtgggccgatcacttttgattcgagatcgggagtca 39421042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 38637305 - 38637253
Alignment:
Q  23 tatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  38637305 tatagtctggcgggccgatcacttttgattcgagatcgggagtcaattctttg 38637253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 36962685 - 36962627
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttg 85  Q
    |||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  36962685 agtctggtgggccgattacttttgattcgagatcaggagtcag-tctttgactcaagttg 36962627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 39041344 - 39041285
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttg 85  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  | |||||||||||    
T  39041344 agtctggtgggccgatcacttttgattcgagatcaggagtcagtttctagactcaagttg 39041285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 6600015 - 6599957
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| |||||| ||||||||| ||||||||||||| ||||||||| |||||||    
T  6600015 agtctggtgggccgatcgcttttgattagagatcgggagtcggttctttgattcaagtt 6599957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 35800500 - 35800550
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttga 76  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  35800500 agtctggtgaaccgatcgcttttgattcgagatcggaagtcagttctttga 35800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 38929838 - 38929896
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||| ||| |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  38929838 agtctgctgggccgatcacttttgattcgagatcaagagtcagttctttggctcaagtt 38929896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 40813851 - 40813797
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactca 80  Q
    |||||||||| |||||||||||||||||||||||||||| || || |||||||||    
T  40813851 agtctggtgggccgatcacttttgattcgagatcgggagccaattttttgactca 40813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19673087 - 19673202
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||| ||  ||||||  || |||||||||||||  || ||||| |||||||||| ||||||||||||||| |||||||| | ||||||| |||||    
T  19673087 gggtgcccttctgttttggtcctaaagtctggtggaccattccctttt-attcgagatcaggagtcagttctttggctcaagtttagttttgggttttgt 19673185  T
Q  101 gttgtgctctttcggtgg 118  Q
     | ||| |||||||||||    
T  19673186 -tggtgttctttcggtgg 19673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 2792333 - 2792286
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  2792333 ccgatcacttttgattcgagatcggaagtcagtttcttgactcaagtt 2792286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 2061808 - 2061759
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  2061808 agtctggtgggctgatcacttttgattcgagattgagagtcagttctttg 2061759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 16501746 - 16501791
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||    
T  16501746 tggtgggccgatcgcttttgattcgagatcgggagtcagctctttg 16501791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 49747538 - 49747586
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttcttt 74  Q
    |||||||||  |||||||||||||||| ||||||| |||||||||||||    
T  49747538 agtctggtgagccgatcacttttgatttgagatcgagagtcagttcttt 49747586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 28966897 - 28966936
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  28966897 ttttgattcgagattgggagtcagttctttggctcaagtt 28966936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 53756767 - 53756802
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgg 61  Q
    |||||||||| |||||||||||||||||||||||||    
T  53756767 agtctggtgggccgatcacttttgattcgagatcgg 53756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19311436 - 19311364
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    ||||| ||| || ||||||| ||| ||||||||||  |||||||||||||||||||| |||||||||||| ||||    
T  19311436 gggtgtccttctgatttggtttta-agtctggtgggtcgatcacttttgattcgaga-cgggagtcagttatttg 19311364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 41118024 - 41117982
Alignment:
Q  39 gatcacttttgattcgagatcgggagtcagttctttgactcaa 81  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||    
T  41118024 gatcacttttgattcgagatcggaagtaagttctttggctcaa 41117982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 2165529 - 2165574
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaag 82  Q
    |||||| ||||||||| |||||||||||||||||  ||||||||||    
T  2165529 ccgatcgcttttgatttgagatcgggagtcagtttcttgactcaag 2165574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 37707425 - 37707392
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatc 59  Q
    |||||||||| |||||||||||||||||||||||    
T  37707425 agtctggtgggccgatcacttttgattcgagatc 37707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 19673259 - 19673331
Alignment:
Q  177 atgtggctcagcttgggtgttggggtatgggagttttattttgagg-gtgttctttgtgggtgagtagtgacg 248  Q
    |||||||| | ||| ||||||| ||  || |||||| ||||||||| |||||||||| |||||||||||||||    
T  19673259 atgtggctaaactttggtgttgaggactgagagtttaattttgaggagtgttctttgggggtgagtagtgacg 19673331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 26474851 - 26474891
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagtt 70  Q
    |||||| |||||||||||||||||||||||| |||| ||||    
T  26474851 tggtgggccgatcacttttgattcgagatcgagagttagtt 26474891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 31207457 - 31207176
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  31207457 gggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggattttgggatttgt 31207358  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||||||||||     
T  31207357 gttgtgctttttcggtggatcggaggtcgcgaggtttgtgatagctgaatgacccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttgga 31207258  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgctt 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||||    
T  31207257 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatggtggatactgtgtttacagtgctt 31207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 9 - 287
Target Start/End: Complemental strand, 24995482 - 24995202
Alignment:
Q  9 tgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgct 108  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  24995482 tgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtgttgtgct 24995383  T
Q  109 ctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgtt-ggggtatggg 207  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||| ||||| | ||    
T  24995382 ctttcagtgggtcagaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatatggctcagcttgggtgttgggggtctagg 24995283  T
Q  208 agttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||| ||||    
T  24995282 agttttattttgagggtgttctttgtgcgtgagtagtgacgatgggcggtggtggataccgtgtttacaatgcttgttttt 24995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 9519485 - 9519764
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  9519485 gggtgccctgctaatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgt 9519584  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgtt-gg 199  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||    
T  9519585 gttgtgctctttcggtgggtcggaggttgcgaagtttgtgatagctgcatgatcattcggttaggtgctcttcgaaatatggctcagcttgggtgttggg 9519684  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtg 278  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  9519685 ggtctgagagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtg 9519764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 37986953 - 37986666
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||| | |||||    
T  37986953 gggtgccctgctaatttggtgttatagtctggtgggccaatcatttttgattcgagatcgggagtcagttctttgactcaagttggtttttgtgctttgt 37986854  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||  |    
T  37986853 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcctgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgtttcg 37986754  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || |||||||||||||| |||||||||||||||||||||||| ||||| | || |||||| ||||||||||||||| |||||| ||||    
T  37986753 gtctgggagttttatttggagggtgttctttgtgggtgagtaatgacgatgggtggtggtagataccgtgtttacaatgcttgttttt 37986666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 37 - 287
Target Start/End: Original strand, 20138448 - 20138700
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 136  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  20138448 ccgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 20138547  T
Q  137 tgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagtttta-ttttgagggtgttctttgtgg 235  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| | | |||||||||||||||| ||||||||||| ||||||||||||||||||| |    
T  20138548 tgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttatttttgagggtgttctttgtag 20138647  T
Q  236 gtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  20138648 gtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgatttt 20138700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 32066390 - 32066119
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||| |||||    
T  32066390 gggtgccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtcagctctttgactccagttggtttttgggctttgt 32066291  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||   |||||| ||||||||| |||||||||||||||||    
T  32066290 gttgtgctctttcggtggttcagaggttgcgaggtttgtgatagctgcatgatcattcggttagatgctctttgaaatgtggttcagcttgggtgttggg 32066191  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtt 271  Q
    || || ||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||| |||||    
T  32066190 gtctgagagttttatttggagggtgttctttgtgagtgagtagtgacgatgggcggtggtggatacagtgtt 32066119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 34389100 - 34388821
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||    
T  34389100 gggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcaagagtcagttctttgactcaagttggtttttgggctttgt 34389001  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||| ||||||||| ||| |||||| ||||||||||||||||   ||||||||| |||| | | |||||   ||||||||||||||||||||||||    
T  34389000 gttgtgctatttcggtggatcgtaggtcgtgaggtttgtgatagct-agtgatccttcagttaggtgttcttcatcatgtggctcagcttgggtgttggg 34388902  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgctt 281  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||| |||||    
T  34388901 gtatgagagttttattttgagggtgttctttgtgggtgagtagtgacgataggcggtggtggata-cgtgtttacattgctt 34388821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 12898369 - 12898123
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||| | | |||||||||| |||| ||| |||||    
T  12898369 gggtgccctattaatttggtaatatagtctggtgacccgatcacttttgattcgagatccggagtcagttatctaactcaagttggttttggggctttgt 12898270  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  12898269 gttgtgctctttcgatggttcggaggtcgcgaggtttgtgatagctgc-tgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggg 12898171  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg 248  Q
    || |  ||||||||||||||||||||||||||||||||||||||||||    
T  12898170 gtcttagagttttattttgagggtgttctttgtgggtgagtagtgacg 12898123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 23 - 287
Target Start/End: Complemental strand, 41893473 - 41893210
Alignment:
Q  23 tatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcg 122  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||      
T  41893473 tatagtctggtgggccaaccacttttgattcgagatcgggagtcagttctttgtctcaagttg-tttttgggctttgtgttgtgctcttttggtggttaa 41893375  T
Q  123 gaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagg 222  Q
    |||||||| |||||||||||||||||||||||||||   || |  ||||||||||||||||||||||||||||||| ||| |||||||| |||||| |||    
T  41893374 gaggtcgcaaggtttgtgatagctgcatgatccttc-tataggtactcttcgaaatgtggctcagcttgggtgttgaggtctgggagttctattttcagg 41893276  T
Q  223 gtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  41893275 gtgttctttgtgggtgagtagtgacgatggtcggtggtggataccgtgtttacagttcttgttttt 41893210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 16457555 - 16457283
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||| |||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  16457555 gggtgtcctgctaatttgatactatagtttggtgg-ccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttaggctttgt 16457457  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||| |  ||||| | |||||| ||||||||||||||||               
T  16457456 gttgtgctctttcggtggttcggatgtcgtgaggtttgtgatagctgcatgatcttgtggttaggtgctctttgaaatgtggctcagct----------- 16457368  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
       ||||||||||||||| |||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  16457367 ---tgggagttttattttcagggtggtctttatgggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgttttt 16457283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36630823 - 36631047
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    ||||||||||||||||||||  || |||||||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||  ||||||||  ||||    
T  36630823 gggtgccctgctaatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcagttctttgactctagtttgtttttgggcttttg 36630922  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||| ||| ||||||||||||||| |||||  ||||||||||||||||||| | | |||||||||||||||||||| ||||| ||| ||    
T  36630923 ttttgtgctctttcgatggatcggaggtcgcgagg-ttgtgggagctgcatgatccttcggtcaggtgctcttcgaaatgtggctcaacttggatgtggg 36631021  T
Q  200 ggtatgggagttttattttgagggtg 225  Q
    ||| || | |||||| |||| |||||    
T  36631022 ggtctgcgtgttttagtttgggggtg 36631047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 15821474 - 15821230
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||| |||||||  || |||||||||| | |||||||||||||||||||||||||||||| ||||||||| | |||| ||||||||  ||||    
T  15821474 gggtgccctgctgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagtcagctctttgacttatgttggtttttgggcttttg 15821375  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | |||||||||||| |||| || ||||||| |||| |||||  | |  | || || || ||||| | ||| |||| |||||||||||||| || |||||     
T  15821374 ttttgtgctctttcagtggatcagaggtcgagagg-ttgtggaaacaacttgttcatttggttaggagcttttcg-aatgtggctcagctcggatgttga 15821277  T
Q  200 ggtatgggagttttattttgagg-gtgttctttgtgggtgagtagtg 245  Q
     || ||||||||||||||||||| |||||||||  | ||||||||||    
T  15821276 agtctgggagttttattttgaggagtgttcttttggagtgagtagtg 15821230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 22773606 - 22773699
Alignment:
Q  122 ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttat 215  Q
    ||||||| |||||||||||||| || ||||||||||| |||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  22773606 ggaggtcacgaggtttgtgatatctacatgatccttctgttaggtgctcttcgaaatgtggctcagtttgggtgttggggtctgggagttttat 22773699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 278
Target Start/End: Complemental strand, 38577840 - 38577606
Alignment:
Q  46 tttgattcgagatcgggagtcagttctttgactcaagttgatttttgg-ggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatag 144  Q
    |||||||||||||||||||| |||||||||  | |||||| |||||||   ||||| ||||||||||||||||| || ||||||| || |||||||  ||    
T  38577840 tttgattcgagatcgggagttagttctttggtttaagttggtttttggacttttgttttgtgctctttcggtggatcagaggtcgaga-gtttgtggaag 38577742  T
Q  145 ctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtat-gggagttttattttgagg-gtgttctttgtgggtgagta 242  Q
    ||||||| || |||||||  | ||| |||| ||| |||| || |||||||||||  || | ||||||||||||||| || |||||||||| || ||||||    
T  38577741 ctgcatgttcattcggtttggagcttttcg-aatatggcgcaacttgggtgttgaagtctggggagttttattttgtggagtgttctttggggatgagta 38577643  T
Q  243 gtgacgttgg-cggtggtggataccgtgtttacagtg 278  Q
    |||||| |||  | | |||||||| ||||||||||||    
T  38577642 gtgacgatggatgattgtggatactgtgtttacagtg 38577606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 10248619 - 10248565
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  10248619 tggtggaccgatcacttttgattcaagatcgggagtcagttctttggctcaagtt 10248565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17657097 - 17657014
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| |||| ||||   || ||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17657097 gggtgcccttctaagttggacctaaagtatggtgggtcgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 17657014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 30236223 - 30236140
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || ||||||| ||  ||||||||||  ||||| ||||||||||||||||||||||||||||||||  |||||||    
T  30236223 gggtgcccttctgatttggttttgaagtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttggttcaagtt 30236140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 15906697 - 15906755
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||    
T  15906697 agtctggtgggccgatcacatttgattcgagatcgggagtcagttctttggttcaagtt 15906755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 22773815 - 22773888
Alignment:
Q  215 ttttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||| |||| |||||||| |||||| ||||    
T  22773815 ttttgagggtgttctttgtgggtgagtagtgacgatgggcagtggtggttaccatgtttacaatgcttgttttt 22773888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 32945760 - 32945715
Alignment:
Q  39 gatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  32945760 gatcacttttgattcgagatcgggagtcaattctttgattcaagtt 32945715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 35821432 - 35821513
Alignment:
Q  207 gagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||| ||||||||||||| || |||||||||| | | ||||||| | ||||| |||||||||||||||| ||||    
T  35821432 gagttttattttaagggtgttctttgaggatgagtagtgatgatgggcggtgctagatactgtgtttacagtgcttgttttt 35821513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 10552279 - 10552325
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttct 72  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  10552279 agtctggtgggccgatcgcttttgattctagatcgggagtcagttct 10552325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 12198139 - 12198081
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||||||||||||||| |||  | || |||||||||||||||| ||||||||    
T  12198139 agtctggtggaccgatcacttttaattgaaaattgggagtcagttctttggctcaagtt 12198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 12442567 - 12442509
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||||||||||||||| |||  | || |||||||||||||||| ||||||||    
T  12442567 agtctggtggaccgatcacttttaattgaaaattgggagtcagttctttggctcaagtt 12442509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 3679471 - 3679515
Alignment:
Q  40 atcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||||||||||||||||||| || |||||| |||||||    
T  3679471 atcacttttgattcgagatcgggagtcggtgctttgattcaagtt 3679515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 23264717 - 23264761
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagtt 70  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  23264717 agtctgatggacctatcaattttgattcgagatcgggagtcagtt 23264761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 35821378 - 35821421
Alignment:
Q  139 tgatagctgcatgatccttcggttaagcgctcttcgaaatgtgg 182  Q
    ||||||||||||||||||||||||| | |||||| |||||||||    
T  35821378 tgatagctgcatgatccttcggttatgtgctcttagaaatgtgg 35821421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 33967337 - 33967375
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  33967337 agtctggtgggccgatcacttttgattcgagatcaggag 33967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 35062468 - 35062514
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttct 72  Q
    |||||||||| ||||||  |||||||||||||||| |||||||||||    
T  35062468 agtctggtgggccgatcgattttgattcgagatcgagagtcagttct 35062514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 40531243 - 40531281
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  40531243 agtctgatgggccgatcacttttgattcgagatcgggag 40531281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 36631061 - 36631097
Alignment:
Q  251 ggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  36631061 ggcggtggtggataccgtgtttacagtgtttgttttt 36631097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 46692913 - 46692627
Alignment:
Q  2 ggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtg 101  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||    
T  46692913 ggtgccctgctaatttggtgatatagtctggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaagttggtttttgggctttgtg 46692814  T
Q  102 ttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgggg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  46692813 ttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcattatcctccggttaagtgctcttcgaaatgtggctcagcttgggtgttgggg 46692714  T
Q  202 tatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    | ||| |||||||||| |||||||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||||||| ||||    
T  46692713 tctggaagttttatttggagggtgttctttgtgggtgagtagtgacgatgggcggtggttgatatcgtgtttacagtgcttgttttt 46692627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 5459147 - 5459434
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||| |||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||    
T  5459147 gggtaccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttgattcaagttgatttttgggctttgt 5459246  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||    
T  5459247 gttgtgctctttcagtggttcggaggttgcgaggtttgtgatagctgcatgatccttcagttaggtgctctttgaaatgtggctcagcttgggtgttggg 5459346  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || ||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||    
T  5459347 gtctggaagttttattttgatggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgattgttttt 5459434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 5389516 - 5389230
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||| |||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  5389516 gggtgcccagctaatttggtactatagtctgaagggccgatcacttttgattcgagatcgggagtcagttctttgactcaagtttgtttttgggctttgt 5389417  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  5389416 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggg 5389317  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || ||||||||||||||||||||||||| ||||  ||||||||||||| | |||||||||||||||||||||||| ||||||| ||||    
T  5389316 gtctgggagttttattttgagggtgttc-ttgtaagtgagtagtgacgatgggcggtggtggataccgtgtttacggtgcttgttttt 5389230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 24450025 - 24449738
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||| ||||||| |||||| |||||| |||||||||||||||| |||||||| ||||||||||||| || |||||| |||||||| |||||    
T  24450025 gggtgccctgctattttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagttctttgtcttaagttggtttttgggatttgt 24449926  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||    
T  24449925 gttgtgctcttttggtggatcggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtgctcttcgaaatgcggctcagcttgggtgttggg 24449826  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || | |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  24449825 gtctaggagttttattttgagggtgttatttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgcttgttttt 24449738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 31585855 - 31585608
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  31585855 gggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgt 31585756  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgtt-gg 199  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||| |||||||||||| ||    
T  31585755 gttgtgctatttcggtgggtcggaggtcgcgaggtttgtgatagctgtatgatcctttggttaggtgctcttcgaaatgtggctaagcttgggtgttggg 31585656  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgac 247  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||    
T  31585655 ggtctgagagttttattttgagggtgttctttgtgggtgagtagtgac 31585608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 41920438 - 41920730
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  41920438 gggtgccctgctaatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggattttgggctttgt 41920537  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgat-----ccttcggttaagcgctcttcgaaatgtggctcagcttgggtg 195  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||     ||||| |||| | |||||||   |||||||||||||||||||    
T  41920538 gttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcatgatcctaaccttcagttaggtgctcttcatcatgtggctcagcttgggtg 41920637  T
Q  196 ttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||||| | |||||||||||||||||||||| |||||||||||||||||||| | |||||||||| |||||||||||||| |||||| ||||    
T  41920638 ttggggtcttggagttttattttgagggtgttttttgtgggtgagtagtgacgataggcggtggtgaataccgtgtttacattgcttgttttt 41920730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 30685999 - 30685800
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||    
T  30685999 gggtgccctgctaatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcagttctttgactcaagttggcttttgggctttgt 30685900  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| | || ||||||||||||||||||||||||    
T  30685899 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatcctttggttaggtgctccttgatatgtggctcagcttgggtgttggg 30685800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 27031935 - 27031660
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||| |||||||  || ||||| |||| |||||||||||||||||||||||| ||||||| |||||| ||||||||| |||| |||  ||||    
T  27031935 gggtgccctgctgatttggttctaaagtctagtgggccgatcacttttgattcgagatcgagagtcagctctttggctcaagttggttttagggattttg 27031836  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| |||||||| | |||| |||||  ||||||||| || |||||||||| ||| |||| |||||||||||| |||| |||||     
T  27031835 ttttgtgctctttcggtggatcggaggttgagagg-ttgtggaagctgcatgttcattcggttaagagcttttcg-aatgtggctcagtttggatgttga 27031738  T
Q  200 ggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacag 276  Q
     || ||||||||||||||||| ||||||||| || ||||||||||||||| | ||| ||  ||||||| ||||||||||    
T  27031737 agtctgggagttttattttgaggggtgttctctg-gggtgagtagtgacgataggccgttatggatactgtgtttacag 27031660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 24684573 - 24684355
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    ||||||||| |||||||| |  || |||||||||| |||||||||||| ||||||||||||  |||||||||||||||| ||||| ||||||||  ||||    
T  24684573 gggtgccctactaatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttgactctagttggtttttgggcttttg 24684474  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| ||||||||||||||| |||||  || |||||||||||||||| | | |||||||||||||||||||| ||||| ||| ||    
T  24684473 ttttgtgctctttcggtggatcggaggtcgcgagg-ttgtggaagatgcatgatccttcggtcaggtgctcttcgaaatgtggctcaacttggatgtcgg 24684375  T
Q  200 ggtatgggagttttattttg 219  Q
    ||| || | |||||| ||||    
T  24684374 ggtctgcgtgttttagtttg 24684355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 46814562 - 46814286
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt-gatttttggggtttg 99  Q
    |||||||||||| |||||||  || |||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||| | |||||||  ||||    
T  46814562 gggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctttttggctcaagttggttttttggcttttg 46814463  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| ||||| |||| ||||||   || ||||||| | || |||| ||| | ||| |||| |||||||||| || |||||||||     
T  46814462 ttttgtgctctttcggtggatcggatgtcgagaggttgcaga-agctgcaagttcattcgattaggagcttttcg-aatgtggctcggcgtgggtgttga 46814365  T
Q  200 ggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacag 276  Q
     ||||||||||||||||| || ||||||| ||||  |||||||||||||| ||| |||| |||||||| ||||||||||    
T  46814364 agtatgggagttttatttcgaggggtgttatttggaggtgagtagtgacgatggacggttgtggatactgtgtttacag 46814286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 7857639 - 7857883
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttgg-ggtttg 99  Q
    |||||||||||| |||||||  || |||||||||| |||||||||||||||||||||||||||||||  |||||  || |||||| |||||||   ||||    
T  7857639 gggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgctgaagttggtttttggccttttg 7857738  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| |||| ||||| |||| |||||  |||||| ||  | |||||||| | ||| || |||||||||||||| ||||||||||     
T  7857739 ttttgtgctctttcggtggatcggtggtcgagagg-ttgtggaagctgcttgtccattcggttaggagct-tttgaaatgtggctcagtttgggtgttga 7857836  T
Q  200 ggtatgggagttttattttga-gggtgttctttgtgggtgagtagtg 245  Q
     || ||||||||||||||||| ||||||||| || ||||||||||||    
T  7857837 agtctgggagttttattttgaggggtgttctatgggggtgagtagtg 7857883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 24658915 - 24659161
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttg- 99  Q
    |||||||||||| |||||||  || |||||||||| || ||||||||||||||||||||||||||||| |||||| || |||||| |||||||| ||||     
T  24658915 gggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtcagctctttggctgaagttggtttttgggctttgg 24659014  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| |||||||||| |||||| |||  |||  |||| || ||||||||   ||| |||||| ||||||||||| |||| |||      
T  24659015 ttttgtgctctttcggtggatcggaggtcgagaggtt-gtggaagcatcatgttcattcggttagaagcttttcgaa-tgtggctcagcctgggagttaa 24659112  T
Q  200 ggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacg 248  Q
    | | ||||||||||||||||| ||||||| |||| |||||||||||||||    
T  24659113 g-tctgggagttttattttgaggggtgttatttgggggtgagtagtgacg 24659161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 110 - 248
Target Start/End: Complemental strand, 6764367 - 6764229
Alignment:
Q  110 tttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggag 209  Q
    ||||| ||||||| ||| || ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||| |  |||||| ||||||    
T  6764367 tttcgatggttcgaagggcgtgaggtttgtgatagctgcatggtccttcggttaggtgctcttcgaaatgtggctcaacttggatactggggtctgggag 6764268  T
Q  210 ttttattttgagggtgttctttgtgggtgagtagtgacg 248  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  6764267 ttttattttcaggatgttctttgtgggtgagtagtgacg 6764229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20113616 - 20113523
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg 94  Q
    ||||||||||||||||||||||||||||||| |||  |||||| ||||||||| ||||||||| |||||||||| ||| |||||| ||||||||    
T  20113616 gggtgccctgctaatttggtattatagtctgctgggacgatcatttttgattcaagatcgggaatcagttctttaacttaagttggtttttggg 20113523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17033572 - 17033655
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||    
T  17033572 gggtgcccttctgatttggtcctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttggttcaagtt 17033655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 19598647 - 19598747
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaag-ttgatttttggggtttgtgttgtgctctttcggtggttcgga 124  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||| | | ||| |||||||||||| ||||    
T  19598647 agtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttgactcaagtttgatttt--gggtttttatggtgttctttcggtggtccgga 19598744  T
Q  125 ggt 127  Q
    |||    
T  19598745 ggt 19598747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6583311 - 6583237
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    ||||||| | || |||||||  || |||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  6583311 gggtgcctttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcggcagtcaattctttg 6583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 6804739 - 6804813
Alignment:
Q  214 attttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||| ||||||||||||||||||||| ||||||| | ||||||||||||||| || ||||||||||||| ||||    
T  6804739 attttcagggtgttctttgtgggtgaggagtgacgatgggcggtggtggatactgtatttacagtgcttgttttt 6804813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9313384 - 9313310
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    ||||||||| || |||||||  || ||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  9313384 gggtgcccttctgatttggtcctaaagtctagtgggctgatcacttttgattcgagatcgggagtcagttctttg 9313310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 27905408 - 27905473
Alignment:
Q  11 ctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttga 76  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  27905408 ctaatttgggtttaaagtctggtggaccgatcacttttgattcgagatcagaagttagttctttga 27905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 38544808 - 38544759
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  38544808 agtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 38544759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 27102213 - 27102260
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  27102213 ccgatcacttttgattcgagatcgggagtcagttctttggatcaagtt 27102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 15840982 - 15840924
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| | ||||||||||||||||||||||||||||||||  |||| |||||||    
T  15840982 agtctggtgggctgatcacttttgattcgagatcgggagtcagtttcttgattcaagtt 15840924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 30685797 - 30685732
Alignment:
Q  223 gtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||||| ||||    
T  30685797 gtgttctttgtgggtgtgtagtgaagatgggcggtggtggataccgtgtttacattgcttgttttt 30685732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 34774858 - 34774950
Alignment:
Q  2 ggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcag-ttctttgactcaagttgatttttggg 94  Q
    |||||||| || |||||||  ||  |||||||||||||||||||||||| ||||||||||||||||| || |||| |||||||| | |||||||    
T  34774858 ggtgcccttctgatttggtcctaacgtctggtggaccgatcacttttga-tcgagatcgggagtcagtttttttggctcaagtttagttttggg 34774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42374149 - 42374217
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagt 69  Q
    ||||||||| || |||||||  | | |||||||||||||||| ||||||||| ||||||||||||||||    
T  42374149 gggtgcccttctgatttggtcatgttgtctggtggaccgatcgcttttgatttgagatcgggagtcagt 42374217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 4651791 - 4651834
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagt 69  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  4651791 agtctggggggccgatcacttttgattcgagatcgggagtcagt 4651834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 32864628 - 32864573
Alignment:
Q  29 ctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||| || ||||||||| |||||||||||| |||| |||||||||||||||||    
T  32864628 ctggtgggccaatcacttttaattcgagatcggaagtcggttctttgactcaagtt 32864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 42374049 - 42374090
Alignment:
Q  28 tctggtggaccgatcacttttgattcgagatcgggagtcagt 69  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  42374049 tctggtggaccggttacttttgattcgagatcgggagtcagt 42374090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 30655571 - 30655615
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagtt 70  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||    
T  30655571 agtctagtgggccgatcgcttttgattcgagatcgggagtcagtt 30655615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 9081569 - 9081527
Alignment:
Q  32 gtggaccgatcacttttgattcgagatcgggagtcagttcttt 74  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||    
T  9081569 gtggatcgatcacttttgattcgagatcgggagccagtgcttt 9081527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 17891522 - 17891560
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  17891522 agtctgatggaccgatcacttttgattcgagattgggag 17891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 22200019 - 22200069
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttga 76  Q
    |||||| ||||||||||||||||||||| |||||| |||||| | ||||||    
T  22200019 agtctgatggaccgatcacttttgattcaagatcgagagtcaatgctttga 22200069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 46603402 - 46603452
Alignment:
Q  25 tagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    ||||||||||| ||  || ||||||||||||||||| ||||||||||||||    
T  46603402 tagtctggtgggccattcgcttttgattcgagatcgagagtcagttctttg 46603452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 18787270 - 18787241
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatc 59  Q
    ||||||||||||||||||||||||||||||    
T  18787270 tggtggaccgatcacttttgattcgagatc 18787241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 31584894 - 31584845
Alignment:
Q  239 agtagtgacgttg-gcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||| || ||||||||||||||||||||||||||| ||| ||||    
T  31584894 agtagtgacgatgagcggtggtggataccgtgtttacagtgattgttttt 31584845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 38306247 - 38306534
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  38306247 gggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcagttctttgactcaagttggtttttgggctttgt 38306346  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  38306347 gttgtgctctttcgatggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggg 38306446  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || || ||||||||||||||||||||||||||| |||||||||||||| | || ||||||||||| ||||| | |||| |||| ||||    
T  38306447 gtctgtgagttttattttgagggtgttctttgtaggtgagtagtgacgatgggtggtggtggatatcgtgtctgcagttcttgttttt 38306534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 37794975 - 37795256
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| |||||| |||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  37794975 gggtgccctgctaatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttgagtcaagttggtttttgggctttgt 37795074  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  37795075 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaactgtggctcagcttgggtgttggg 37795174  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgctt 281  Q
    || || ||||||||||||||||||||||||||||| | |||||| | | | |||||||||||||||||||||||||||||||    
T  37795175 gtttgagagttttattttgagggtgttctttgtggttaagtagtaatgatgggcggtggtggataccgtgtttacagtgctt 37795256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 47325980 - 47325693
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||| ||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||    
T  47325980 gggtgccttgctaatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtcagctctttgactcaagttggtttttgggctttgt 47325881  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    | |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  47325880 gctgtgctctttcgatggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggg 47325781  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| | |||| || ||||||| |||||||||||||||| ||||    
T  47325780 gtctgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatgatggatactgtgtttacagtgcttgttttt 47325693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 5860383 - 5860096
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  5860383 gggtgccctgctaatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtcaattctttgacgcaagttggtttttgggctttgt 5860284  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  5860283 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcagttaggtgctcttcgaaatgtggctcagcttgggtgttggg 5860184  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || ||||||||||||||| |||||||||||||||| |||||||||||| | |||  ||||| |||||||||| | |||||||| ||||    
T  5860183 gtctgggagttttattttcagggtgttctttgtggatgagtagtgacgatgggcaatggtgaataccgtgttaatagtgcttgttttt 5860096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 37 - 287
Target Start/End: Complemental strand, 44353623 - 44353371
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 136  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  44353623 ccgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 44353524  T
Q  137 tgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagtttta-ttttgagggtgttctttgtgg 235  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| | | |||||||||||||||| ||||||||||| ||||||||||||||||||| |    
T  44353523 tgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttatttttgagggtgttctttgtag 44353424  T
Q  236 gtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  44353423 gtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgatttt 44353371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 10244168 - 10244449
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||||    
T  10244168 gggtgccctgctaatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttagtttttggcctttgt 10244267  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||| |||||||||||||||||||| ||    
T  10244268 gttgtgctctttcagtggttcggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtgctctttgaattgtggctcagcttgggtgtttgg 10244367  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgctt 281  Q
    || ||||| ||||| || ||||||| |||||||||||||||||||||| | |||| ||||||||||| ||||||| ||||||    
T  10244368 gtctgggatttttagttggagggtggtctttgtgggtgagtagtgacgatgggcgatggtggataccatgtttacggtgctt 10244449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 3419751 - 3419463
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||| |||||||||| || ||| |||||| | |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  3419751 gggtgccctgttaatttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggctttgt 3419652  T
Q  101 gt-tgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
     | |||||||||||||||| || |||||| | ||||||||||||||||| |||||||||||||| | || ||||||| ||||||| | ||||||||||||    
T  3419651 ttctgtgctctttcggtggatcagaggtcacaaggtttgtgatagctgcttgatccttcggttaggtgcgcttcgaattgtggcttaacttgggtgttgg 3419552  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||  |||||||||||| | |||||||| || ||| ||||    
T  3419551 ggtttgggagttttattttaagggtgttctttgtgagtgagtagtgacgatgaacggtggtggatatcatgtttacaatgnttgttttt 3419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 3867102 - 3867379
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt-g 99  Q
    ||||| ||||||||||||||| || | | |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| |    
T  3867102 gggtggcctgctaatttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttctttgactcaagttggtttttgggcttttg 3867201  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
      |||||||||| |||||| || ||||||||||||||   || | ||||||||||||| ||| | | ||||||||| |||||||||||||||||||||||    
T  3867202 ctttgtgctcttgcggtggatcagaggtcgcgaggttatggaaa-ctgcatgatcctttggtcaggtgctcttcgatatgtggctcagcttgggtgttgg 3867300  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagt 277  Q
     |||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||    
T  3867301 agtatggaagttttattttgagggtgttctttgggggtgagtagtgacgatggacggtggtggatatcgtgtttacagt 3867379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 33435095 - 33435337
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttgggg-tttg 99  Q
    |||||||||| |||||||||| || |||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||||  ||||    
T  33435095 gggtgccctgttaatttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttgtctcaagttcgtttgtgggcatttg 33435194  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| ||||||||||||||||| |||| |||| |||||||||||||| | | |||||||||| ||||||||||||||| |||||     
T  33435195 ttttgtgctctttcggtggatcggaggtcgcgaggtt-gtgaaagctacatgatccttcggtcaggtgctcttcgaattgtggctcagcttggttgttga 33435293  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtag 243  Q
    ||| || ||||||| |||||||||||||||||| ||||||||||    
T  33435294 ggtctgagagttttcttttgagggtgttctttgggggtgagtag 33435337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 41089843 - 41089569
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttg-gggtttg 99  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |  ||||    
T  41089843 gggtgctctgctaatttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtcagctctttgactcaagttggtttttgagcttttg 41089744  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||| ||||||||||| ||||||||||||||| |||||  ||||||||||| ||||| | | | |||||||||| ||| |||||   |||||||| |    
T  41089743 ttttgtgatctttcggtggatcggaggtcgcgagg-ttgtggaagctgcatgattcttcgttgaggtgctcttcgaagtgtagctcaagatgggtgttag 41089645  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgac-gttggcggtggtggataccgtgtttaca 275  Q
    ||| ||||||||||||||||||||||||||||| |||| | |||||||  | ||||||||| ||||| |||||||||    
T  41089644 ggtctgggagttttattttgagggtgttctttgcgggt-aatagtgacaatgggcggtggtagatactgtgtttaca 41089569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 25160801 - 25161084
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||  ||||  | | |||||| |||||||| |  ||    
T  25160801 gggtgccctgctaatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaatcttgaaattaagttggtttttgggct--gt 25160898  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| | ||||||| | ||||||||||||||||  ||||||||| |||| | |||||| ||||||||||||| ||| | |||||||    
T  25160899 gttgtgctctttcggtggattggaggtctcaaggtttgtgatagctgtgtgatccttcagttaggtgctcttggaaatgtggctcaacttagatgttggg 25160998  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || || ||||||  |||| | ||||||||||||||||||||||||||| | |||| ||||||||||  |||||||| |||||| ||||    
T  25160999 gtctgagagttt--ttttaaaggtgttctttgtgggtgagtagtgacgatgggcgttggtggatactatgtttacattgcttgttttt 25161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 34389950 - 34390195
Alignment:
Q  3 gtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttgtg 101  Q
    |||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||| ||||||||  ||| |     
T  34389950 gtgccctgctgatttggttttaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggcttttatt 34390049  T
Q  102 ttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgggg 201  Q
    ||||||||||||||||| |||||||||| |||| |||||  ||||||||| || |||| ||| | ||| ||| |||||||||||| |||||||||||  |    
T  34390050 ttgtgctctttcggtggatcggaggtcgagagg-ttgtggaagctgcatgttcattcgattaggagcttttc-aaatgtggctcaacttgggtgttgtag 34390147  T
Q  202 tatgggagttttattttga-gggtgttctttgtgggtgagtagtgacg 248  Q
    | ||||||||||||||||| |||||||||||| || ||||||||||||    
T  34390148 tctgggagttttattttgaggggtgttctttggggatgagtagtgacg 34390195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 31972084 - 31971942
Alignment:
Q  146 tgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtg 245  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  31972084 tgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttatttggagggtgttctttgtgggtgagtagtg 31971985  T
Q  246 acg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||| | ||||||||| |||||||||||||||||||||| ||||    
T  31971984 acgatgggcggtggttgataccgtgtttacagtgcttgttttt 31971942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 6584895 - 6585031
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||| |||||||  || |||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||| ||||||||  ||||    
T  6584895 gggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggcttttg 6584994  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtt 136  Q
    | ||||||||||||||||| |||||||| | ||||||    
T  6584995 ttttgtgctctttcggtggatcggaggttgagaggtt 6585031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 35745922 - 35745670
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt-- 98  Q
    ||||||||| ||||||| ||  || |||||| ||| | ||||||||||||||||||||||| |||||  |||||| ||||||||| |||||||| |||      
T  35745922 gggtgccctactaattttgttctaaagtctgatgggctgatcacttttgattcgagatcggaagtcatctctttggctcaagttggtttttgggcttttg 35745823  T
Q  99 gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaat---gtggctcagcttgggtg 195  Q
     | ||||||||||||||||| | |||||| | |||| |||||  ||||||||| || |||||||| | ||| ||||| ||   |||||||||||||||||    
T  35745822 tttttgtgctctttcggtggattggaggtggagagg-ttgtggaagctgcatgttcattcggttaggagcttttcgatatatagtggctcagcttgggtg 35745724  T
Q  196 ttggggtatgggagttttattttgag-ggtgttctttgtgggtgagtagtgacg 248  Q
    |||  || ||   ||||||||||||| ||||||||||| |||||||||||||||    
T  35745723 ttgaagtctgactgttttattttgagaggtgttctttgggggtgagtagtgacg 35745670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 3419321 - 3419204
Alignment:
Q  171 ttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtg 269  Q
    |||||| ||||||| | ||||||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||| | ||  |||||||||||| | ||    
T  3419321 ttcgaattgtggcttaacttgggtgttggggtttgggagttttattttaagggtgttttttgtgagtgagtagtgatgatgaacggtggtggatatcatg 3419222  T
Q  270 tttacagtgcttgatttt 287  Q
    |||||| |||||| ||||    
T  3419221 tttacaatgcttgttttt 3419204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 40726392 - 40726313
Alignment:
Q  208 agttttattttgagggtgttctttgtgggtgagtagtgacgtt-ggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||||||||||||||||||| |||||||||| | | |||||||||||||||||||||||| ||||||||||||    
T  40726392 agttttattttgagggtgttctttgtgg-tgagtagtgatgataggcggtggtggataccgtgtttaccgtgcttgatttt 40726313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 248
Target Start/End: Original strand, 8745166 - 8745387
Alignment:
Q  28 tctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggt 127  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||  |||||||   ||||||| ||| | | ||  ||||||||||| ||||||||    
T  8745166 tctggtgggccgatcacttttgattcgagatcgggattcagttcgttggatcaagtttggttttgggctttttatggt-ttctttcggtggatcggaggt 8745264  T
Q  128 cgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgaggg---- 223  Q
    || |||| |||||  |||||||||||| ||| | || | ||| ||||  |||||||||||||| ||||||   |  ||||||||| ||||||||||        
T  8745265 cgagagg-ttgtggaagctgcatgatctttcagataggagcttttcg-gatgtggctcagctttggtgttcaagactgggagtttaattttgaggggtgt 8745362  T
Q  224 tgttctttgtgggtgagtagtgacg 248  Q
    | ||||||| |||||||||||||||    
T  8745363 ttttctttgggggtgagtagtgacg 8745387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3478338 - 3478471
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||| ||  ||||||  || ||| |||||| ||||||||||||||||||||||||||||| ||||||||| |||||| | | ||||||| |||||    
T  3478338 gggtgcccttctgttttggtcctaaagtttggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaagattagttttgggctttgt 3478437  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggt 135  Q
     | ||| ||||||||||| |||||| ||| |||||    
T  3478438 -tggtgttctttcggtggatcggagatcgagaggt 3478471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 13311849 - 13311908
Alignment:
Q  25 tagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||    
T  13311849 tagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtt 13311908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16954639 - 16954722
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  || |||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  16954639 gggtgcccttctgatttggtcctaaagtctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttgactcaagtt 16954722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24324893 - 24324810
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || ||||||| ||| ||| |||||| ||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  24324893 gggtgcccttctgatttggtcttaaagtttggtgggccgatcaattttgattcgagatcgggagtcaattctttggctcaagtt 24324810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 6716806 - 6716748
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6716806 agtctggttggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 6716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11379222 - 11379139
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| ||||||||||  | ||||||||||  |||||| |||||||||||||||||||||||||| |||||  |||||||    
T  11379222 gggtgcccttctaatttggtcatgtagtctggtgagccgatcgcttttgattcgagatcgggagtcagtactttggttcaagtt 11379139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1320780 - 1320863
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||  | |||||||  || |||||||||| ||||||||||||||||| | ||||| ||||||||||||| ||||||||    
T  1320780 gggtgcccttttgatttggtcataaagtctggtgggccgatcacttttgattcaaaatcggaagtcagttctttggctcaagtt 1320863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 6585043 - 6585146
Alignment:
Q  177 atgtggctcagcttgggtgttggggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgtttac 274  Q
    ||||||||||||||||||||||  || ||||||||||||||||| ||||| | ||||  |||||||||||||| || | ||| |||||||| |||||| |    
T  6585043 atgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgctatttggaggtgagtagtgacgatgagtggttgtggatactgtgttttc 6585142  T
Q  275 agtg 278  Q
    ||||    
T  6585143 agtg 6585146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16829031 - 16828948
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  || |||||||| | | ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  16829031 gggtgcccttctgatttggtcctaaagtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttgactcaagtt 16828948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 38485567 - 38485610
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagt 69  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  38485567 agtctggtgggccgatcacttttgattcgagatcgggagtcagt 38485610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42533347 - 42533264
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  || |||||||||| | ||||||||||||||||||||||||||||| | ||||| || |||||    
T  42533347 gggtgccctcctgatttggtcctaaagtctggtgggctgatcacttttgattcgagatcgggagtcaatcctttggcttaagtt 42533264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 9349760 - 9349806
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttct 72  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  9349760 agtctggtgggccgatcacttttgattcgagatcgggagtcaattct 9349806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 12480901 - 12480955
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||  |||||||    
T  12480901 tggtgggccgatcgcttttgattcgagatcgggagtcagttctttggttcaagtt 12480955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 27993606 - 27993568
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27993606 agtctggtggaccgatcacttttgattcgagatcgggag 27993568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 47457092 - 47457034
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||||||||    
T  47457092 agtctgatggaccgatcgcttttgatttgagattgggagtcagttctttggctcaagtt 47457034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 48162083 - 48161984
Alignment:
Q  39 gatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt--gtgttgtgctctttcggtggttcggaggtcgcgaggtt 136  Q
    ||||| ||||||||||||||||| | ||||||||||| ||||| |||||||||||  |||   | ||||||||||| ||||| || ||||||| ||||||    
T  48162083 gatcatttttgattcgagatcggaaatcagttctttggctcaaattgatttttggacttttgtttttgtgctcttttggtggatcagaggtcgagaggtt 48161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 1820072 - 1820014
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||  |||||||||||||| ||||||||  ||||||| |||||||    
T  1820072 agtctggtggaccgatcgattttgattcgagatagggagtcaaatctttgattcaagtt 1820014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 25153231 - 25153265
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcg 60  Q
    |||||||||||||||||||||||||||||||||||    
T  25153231 agtctggtggaccgatcacttttgattcgagatcg 25153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 46262189 - 46262151
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  46262189 agtctggtgggccgatcacttttgattcgagatcgggag 46262151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 9428176 - 9428128
Alignment:
Q  25 tagtctggtggaccgatcacttttgattcgagatcgggagtcagttctt 73  Q
    ||||||||||  ||||||||||||||||||||||| | |||||||||||    
T  9428176 tagtctggtgagccgatcacttttgattcgagatcagaagtcagttctt 9428128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 17802885 - 17802833
Alignment:
Q  27 gtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactc 79  Q
    ||||||||| ||||||||||||||||||||||||| || ||| | ||||||||    
T  17802885 gtctggtgggccgatcacttttgattcgagatcggaagccagctttttgactc 17802833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 35206763 - 35206725
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  35206763 agtctggtgggccgatcacttttgatccgagatcgggag 35206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 46133348 - 46133302
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttct 72  Q
    |||||||||  |||||| ||||||||| |||||||||||||||||||    
T  46133348 agtctggtgagccgatcgcttttgatttgagatcgggagtcagttct 46133302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 23983191 - 23983264
Alignment:
Q  11 ctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| ||  ||||||||||  |||||  ||||||||||||||||||||||| ||| ||  ||||||||    
T  23983191 ctaatttggtcttgaagtctggtgggtcgatcgtttttgattcgagatcgggagtcaattccttagctcaagtt 23983264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 6716658 - 6716586
Alignment:
Q  177 atgtggctcagcttgggtgttggggtatgggagttttattttg-agggtg-ttctttgtgggtgagtagtgac 247  Q
    |||||||||||||| ||||||| || |||||||||| ||||||  ||||| ||| ||| ||||||||||||||    
T  6716658 atgtggctcagctttggtgttgaggaatgggagtttaattttgtggggtgtttcgttgggggtgagtagtgac 6716586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 39338960 - 39338674
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  39338960 gggtgccctgctaatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgt 39338861  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||| |||||||||||||||| |    
T  39338860 gttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaattgtgactcagcttgggtgttgag 39338761  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||| ||||    
T  39338760 gtctgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatggtggata-cttgtttacagtgcttgttttt 39338674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 10524084 - 10524373
Alignment:
Q  2 ggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtca----gttctttgactcaagttgatttttggggtt 97  Q
    |||||||||| ||||||||  ||||||||||||| |||||||||||||||||||||||||||||||     ||||||||||||||||| |||||||| ||    
T  10524084 ggtgccctgccaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaatatattctttgactcaagttggtttttgggctt 10524183  T
Q  98 tgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgtt 197  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||    
T  10524184 tgtgttgtgctctttcggt-gttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgatatgtggctcagcttgggtgtt 10524282  T
Q  198 ggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||    
T  10524283 ggggtttgggagttttatttggagggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacggtgcttgttttt 10524373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 387159 - 387447
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt-- 98  Q
    ||||||||||||||||||||| || |||||||||| | |||||||||||||| |||||||||||||| ||||||||||||||||| |||||| | |||      
T  387159 gggtgccctgctaatttggtactaaagtctggtgggctgatcacttttgatttgagatcgggagtcaattctttgactcaagttggtttttgagcttttg 387258  T
Q  99 gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttg 198  Q
     | ||||||||||| ||||| ||||||||| |||||||| ||  ||||||||| || ||| || | | ||||||||| | ||||||||||||||||||||    
T  387259 tttttgtgctcttttggtggatcggaggtcacgaggttt-tggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttg 387357  T
Q  199 gggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||| ||   ||||||||| |||||| ||||    
T  387358 gggtctgggagttttattttgagggtgttctttgggggtgaatagtgacgatgggcggtggtgaattttgtgtttacaatgcttgttttt 387447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 55 - 281
Target Start/End: Complemental strand, 17116920 - 17116693
Alignment:
Q  55 agatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatc 154  Q
    |||| ||||||||||| ||||||||| |||| ||||| || ||||| ||||||| ||||| | | | |||||||||||||||||||||| || | |||||    
T  17116920 agattgggagtcagtt-tttgactcatgttggtttttaggctttgttttgtgctttttcgatagattggaggtcgcgaggtttgtgatatctacttgatc 17116822  T
Q  155 cttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggag-ttttattttgagggtgttctttgtgggtgagtagtgacg-ttgg 252  Q
    | ||||||| | |||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||| | ||    
T  17116821 catcggttaggtgctcttcgtaatgtggctcagcttgggtgttggggtctgagagtttttattttgagggtgttctttgtgggtgagtaatgacgatggg 17116722  T
Q  253 cggtggtggataccgtgtttacagtgctt 281  Q
    |||||||||||||||||||||||||||||    
T  17116721 cggtggtggataccgtgtttacagtgctt 17116693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 7874277 - 7874554
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||| |||||||  || ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  ||||    
T  7874277 gggtgccctgctgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggcttttg 7874376  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | |||||||| |||||||| |||||||||| |||| |||||  | || | || || || ||||| | ||| |||| |||||||||||||||||||||||     
T  7874377 ttttgtgctcattcggtggatcggaggtcgagagg-ttgtggaaactacttgttcatttggttaggagcttttcg-aatgtggctcagcttgggtgttga 7874474  T
Q  200 ggtatgggagttttattttgaggg-tgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtg 278  Q
     || | |||||||||||||||||| ||||||||| ||||||||||||||| | || ||| |||||||| ||||||||||||    
T  7874475 agtcttggagttttattttgagggatgttctttg-gggtgagtagtgacgatgggtggttgtggatactgtgtttacagtg 7874554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 14106619 - 14106342
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||||| |||||||  || |||||||||| ||||||||||||||||| |||||||||||||| |||||   |||  ||   |||| |||||| |    
T  14106619 gggtgccctgctgatttggtcctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcagttttggtttttgggttttt 14106520  T
Q  101 gtt---gtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgtt 197  Q
    |||   ||||||||||||||| || ||||||| |||||| |||  || || |||||| |||||||||| ||| | |||| ||||||||||||||||||||    
T  14106519 gtttttgtgctctttcggtggatcagaggtcgagaggtt-gtggaagttgtatgatcattcggttaagagctttacgaa-tgtggctcagcttgggtgtt 14106422  T
Q  198 ggggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgtttaca 275  Q
    |  || || |||||||||||||| |||||||||||| ||||||||||||||| || | ||| |||||||| |||||||||    
T  14106421 gaagtctgagagttttattttgaggggtgttctttgggggtgagtagtgacgatgagtggttgtggatactgtgtttaca 14106342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 247
Target Start/End: Original strand, 14405209 - 14405431
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttgtgttgtgctctttcggtggttcgga 124  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||  ||||| ||||||||||||||||| || ||    
T  14405209 agtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggctcaagttggtttttgggcttttgttttgtgctctttcggtggatcaga 14405308  T
Q  125 ggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgaggg- 223  Q
     |||| | || |||||  | ||||| | || || ||||| | |||  |||  |||||||||  |||||||||||  || ||||||||||||||||||||     
T  14405309 agtcgagtgg-ttgtggaaactgcacgttcatttggttaggagcttgtcg-catgtggctcgacttgggtgttgaagtctgggagttttattttgaggga 14405406  T
Q  224 tgttc-tttgtgggtgagtagtgac 247  Q
    ||||| |||| ||||||||||||||    
T  14405407 tgttcttttgggggtgagtagtgac 14405431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 5254267 - 5254515
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttgtgttgtgctctttcggtggttcgga 124  Q
    ||||| |||| |||||||||||| ||| ||||||||||||| | ||||||  |||||||| |||| |||  ||||| ||||||| ||||||||| |||||    
T  5254267 agtctagtgggccgatcacttttaatttgagatcgggagtctgctctttggttcaagttggttttcgggcttttgttttgtgctttttcggtggatcgga 5254366  T
Q  125 ggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttga-ggg 223  Q
    ||||| |||| |||||  ||||||||| || |||||||  | ||| |||| |||||||||||| ||||||||||  || || |||||   |||||| |||    
T  5254367 ggtcgagagg-ttgtggaagctgcatgttcattcggtttggagcttttcg-aatgtggctcagtttgggtgttgaagtctgagagtt---ttttgagggg 5254461  T
Q  224 tgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtg 278  Q
    |||||||  |||||||||||||||| | || ||| |||||||| ||||||||||||    
T  5254462 tgttctt--tgggtgagtagtgacgatgggtggttgtggatactgtgtttacagtg 5254515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 7460835 - 7460940
Alignment:
Q  175 aaatgtggctcagcttgggtgttggggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgttt 272  Q
    ||||||||||||||||||||||||  || ||||||||||||||||| |||||||||||| || |||||||||||| || | ||| |||||||  ||||||    
T  7460835 aaatgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgttctttggggttgagtagtgacgatgtgtggttgtggatattgtgttt 7460934  T
Q  273 acagtg 278  Q
    ||||||    
T  7460935 acagtg 7460940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1269469 - 1269552
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||| ||  || |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  1269469 gggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtt 1269552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 22885203 - 22885145
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||    
T  22885203 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtt 22885145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 4471934 - 4472002
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg 94  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  4471934 agtctggtgggccgatcgcctttgattcgagatcgggagtcagttctttgattcaagtttgtttttggg 4472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13337260 - 13337343
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||   ||| |||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  13337260 gggtgcccttctgatttgaccttaaagtctgatgggccgatcacttttgattcgaaatcggaagtcagttctttgactcaagtt 13337343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 16959993 - 16960051
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  16959993 agtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggctcaagtt 16960051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 15126480 - 15126380
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggag 125  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||||||| |||| |||   ||||||| ||| | | ||| |||||||||||| |||||    
T  15126480 agtctggtgggccgatcatttttgattcgagatcgggagtcggttctttggctcatgtttggttttgggcttt-tatggtgttctttcggtggtccggag 15126382  T
Q  126 gt 127  Q
    ||    
T  15126381 gt 15126380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 10173648 - 10173428
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgtt-gtgctctttcggtggttcgga 124  Q
    ||||| |||| ||||||||||||||||||||||||| ||| |||| |||| ||||||||   ||||||| ||| |||| ||| ||||||||||  |||||    
T  10173648 agtctagtgggccgatcacttttgattcgagatcggaagtaagttatttggctcaagtttggttttgggcttt-tgttggtgttctttcggtgaatcgga 10173550  T
Q  125 ggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagg-g 223  Q
    ||||| |||| | |||  || || |||||| || |  || | ||| ||||  |||||||||||||| ||||||| ||  || |||||| ||||||||| |    
T  10173549 ggtcgagagg-tggtggaagttgaatgatcttttgaatatgagcttttcg-gatgtggctcagctttggtgttgaggactgagagtttaattttgaggag 10173452  T
Q  224 tgttctttgtgggtgagtagtgacg 248  Q
    | ||||||| |||||||||||||||    
T  10173451 tattctttg-gggtgagtagtgacg 10173428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 9560854 - 9560804
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttgactca 80  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  9560854 tggtggaccgatcacttttgattcgagatcgggagctagttttttgactca 9560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25505004 - 25504930
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||  | ||||||| ||  ||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  25505004 gggtgcccttatgatttggtcttgcagtctggtggacctatcgcttttaattcgagatcgggagtcagttctttg 25504930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 2062901 - 2062958
Alignment:
Q  27 gtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| |||||  ||||||||||||||||||||||||| |||||| ||||||||    
T  2062901 gtctggtgggccgattgcttttgattcgagatcgggagtcagctctttggctcaagtt 2062958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 33788702 - 33788653
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  33788702 agtctggtgggccgatcgcttttgattcgagattgggagtcagttctttg 33788653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 7695984 - 7696032
Alignment:
Q  36 accgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  7695984 accgatcacttttgattcgataccgggagtcagttctttggctcaagtt 7696032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 248
Target Start/End: Complemental strand, 16952434 - 16952232
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatag 144  Q
    |||||||||||||||||||| |||||||||| ||||||||   ||||||   || | | ||| ||||||||||| |||||||| | |||| | |||  ||    
T  16952434 ttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggttgagagg-tggtggaag 16952336  T
Q  145 ctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttga-gggtgttctttgtgggtgagtag 243  Q
    ||  | |||| ||||| || | ||| ||||  |||||| ||| ||| ||||||| ||  ||||||||| |||| || |||||||||||| ||||||||||    
T  16952335 ctaaacgatctttcggataggagcttttcg-gatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgggggtgagtag 16952237  T
Q  244 tgacg 248  Q
    |||||    
T  16952236 tgacg 16952232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 248
Target Start/End: Complemental strand, 17023099 - 17022897
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatag 144  Q
    |||||||||||||||||||| |||||||||| ||||||||   ||||||   || | | ||| ||||||||||| |||||||| | |||| | |||  ||    
T  17023099 ttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggttgagagg-tggtggaag 17023001  T
Q  145 ctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttga-gggtgttctttgtgggtgagtag 243  Q
    ||  | |||| ||||| || | ||| ||||  |||||| ||| ||| ||||||| ||  ||||||||| |||| || |||||||||||| ||||||||||    
T  17023000 ctaaacgatctttcggataggagcttttcg-gatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgggggtgagtag 17022902  T
Q  244 tgacg 248  Q
    |||||    
T  17022901 tgacg 17022897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 248
Target Start/End: Complemental strand, 17060405 - 17060203
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatag 144  Q
    |||||||||||||||||||| |||||||||| ||||||||   ||||||   || | | ||| ||||||||||| |||||||| | |||| | |||  ||    
T  17060405 ttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggttgagagg-tggtggaag 17060307  T
Q  145 ctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttga-gggtgttctttgtgggtgagtag 243  Q
    ||  | |||| ||||| || | ||| ||||  |||||| ||| ||| ||||||| ||  ||||||||| |||| || |||||||||||| ||||||||||    
T  17060306 ctaaacgatctttcggataggagcttttcg-gatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttctttgggggtgagtag 17060208  T
Q  244 tgacg 248  Q
    |||||    
T  17060207 tgacg 17060203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 4162090 - 4162052
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4162090 agtctggtgggccgatcacttttgattcgagatcgggag 4162052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 23650396 - 23650444
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttcttt 74  Q
    |||||||||| | |||| |||||||||||||||||||||||| ||||||    
T  23650396 agtctggtgggctgatcgcttttgattcgagatcgggagtcatttcttt 23650444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 42048273 - 42048229
Alignment:
Q  39 gatcacttttgattcgagatcgggagtcagttctttgactcaagt 83  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||    
T  42048273 gatcacttttgattcgagaccgggagccagttttttgactcaagt 42048229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 17079199 - 17079238
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  17079199 ttttgattcgagatcgggagccagttctttggctcaagtt 17079238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 31902484 - 31902438
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttct 72  Q
    |||||||||| || ||| ||||| |||||||||||||||||||||||    
T  31902484 agtctggtgggccaatcgcttttaattcgagatcgggagtcagttct 31902438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 34230223 - 34230312
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggt 127  Q
    ||||||| |||| |||||||||| |||||||||||||||  |||||||   ||||||| ||| ||| ||  ||||||||||| ||||||||    
T  34230223 ccgatcattttttattcgagatcaggagtcagttctttggatcaagtttgattttgggctttttgtggt-ttctttcggtggatcggaggt 34230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 36276241 - 36276184
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| | | || ||||||||||||||||||||||||  |||||||||||||||    
T  36276241 agtctggtgggctgttcgcttttgattcgagatcgggagtca-atctttgactcaagtt 36276184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41086883 - 41086825
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatc 59  Q
    ||||||||| || |||||||  |||||||||||||  | ||||||||||||||||||||    
T  41086883 gggtgcccttctgatttggtcatatagtctggtgggtcaatcacttttgattcgagatc 41086825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 2392601 - 2392320
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||| || |||||| |||||||| |||||    
T  2392601 gggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtcttaagttggtttttgggctttgt 2392502  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||||||||||||||    
T  2392501 gttgtgctctttcggtggatcggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggg 2392402  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgctt 281  Q
    || | ||||||||||||||  |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  2392401 gtctaggagttttattttgtaggtgttatttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgctt 2392320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 20611769 - 20612050
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||| ||| |||||| || ||| ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||     
T  20611769 gggtgccctgctaatttcgtactatagtttgttgggccgatcatttttgattcgagatcgggagtcagttctttgacttaagttggtttttgggctttgc 20611868  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||||||||||||||| ||    
T  20611869 gttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaaatgtgactcagcttgggtgtt-gg 20611967  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttg 282  Q
    || | ||||||||||| ||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||    
T  20611968 gtctaggagttttattctgagggtgttctttgtgggtgagtagtgacgatgggcgatggtggatactgtgtttacagtgcttg 20612050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 34475849 - 34475564
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||||  |||| || | ||||||||||||||| |||||    
T  34475849 gggtgccctgctaatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaatcttggaattaagttgatttttgggctttgt 34475750  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||||| |||||||||    
T  34475749 gttgtgctctttcggtggattggaggtcgcgaggtttgtgatagctgtatgatccttcggttaggtgctcttcgaaatgtgactcagcttaggtgttggg 34475650  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||| ||||||  |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||    
T  34475649 gtatgagagttt--ttttaagggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacattgcttgttttt 34475564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 46 - 287
Target Start/End: Original strand, 47235729 - 47235971
Alignment:
Q  46 tttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagc 145  Q
    ||||||||||||||| ||||| ||||||||||| |||||| |||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||    
T  47235729 tttgattcgagatcgagagtcggttctttgacttaagttggtttttgggctttgtgttttgctctttcggtggatcagaggtcgcgaggtttgtgatagc 47235828  T
Q  146 tgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtg 245  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  47235829 tgcatgatccttcggttaggtgctcttcgaaatgtggttcagcttgggtgttggggtctgcgagttttattttgagggtgttctttgtgggtgagtagtg 47235928  T
Q  246 acgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||| ||| |||||||||||||||||||||||||||||| ||||    
T  47235929 acgatggacggtggtggataccgtgtttacagtgcttgttttt 47235971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 45163839 - 45164123
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtg--gaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt 98  Q
    ||||||||||||||||||||| |||||||| |||  | ||||||||||||||||||||||| | |||||||| |||| || |||||| |||||||| |||    
T  45163839 gggtgccctgctaatttggtactatagtcttgtgtgggccgatcacttttgattcgagatcagaagtcagttttttgtcttaagttggtttttgggcttt 45163938  T
Q  99 gtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttg 198  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  45163939 gtgttgtgctctttcggtggatcggaggtcacgaagtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggcttagcttgggtgttg 45164038  T
Q  199 gggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttg 282  Q
    |||| | |||||||||||||||||||||| ||||| ||||| |||||||| | ||||||| || |||||||||||||| ||||||    
T  45164039 gggtctaggagttttattttgagggtgttatttgtaggtgattagtgacgatgggcggtgatgaataccgtgtttacaatgcttg 45164123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 17550964 - 17551210
Alignment:
Q  22 ttatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttc 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||  ||    
T  17550964 ttatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtgttgtgctctttcgatgcatc 17551063  T
Q  122 ggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgag 221  Q
    ||||||||||||||||||||||||||||||||     ||||| | ||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  17551064 ggaggtcgcgaggtttgtgatagctgcatgat-----ggttaggtgctcttcgaaatgtggctcagtttgggtgttggggtctgagagttttattttgag 17551158  T
Q  222 ggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgttt 272  Q
    |||||||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  17551159 ggtgttctttgtcggtgagtagtgacgatgggcggtggtggttaccttgttt 17551210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 31482870 - 31483150
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||| |||| ||||||||||  |||||||||| || | ||||||||||||||||||||||||| |||  ||||  | | ||||||||||||||| |||||    
T  31482870 gggtaccctactaatttggttctatagtctggcgggcggatcacttttgattcgagatcgggaatcaaatcttaaaattaagttgatttttgggctttgt 31482969  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  31482970 gttgtgctctttcggtggattggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttaggtgttggg 31483069  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgtttacagtgctt 281  Q
    || || ||||||| |||| |||||||||||||||||| |||||||||| ||  | |||||||||||| |||||||| |||||    
T  31483070 gtttgagagtttt-ttttaagggtgttctttgtgggttagtagtgacgatgaacagtggtggataccatgtttacattgctt 31483150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 19176488 - 19176777
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    ||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||    
T  19176488 gggtgccctgctaatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttttg 19176587  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatcc--ttcggttaagcgctcttcgaaatgtggctcagcttgggtgtt 197  Q
      ||||||||||| ||||| ||||||||||| ||| |||||  |||||||||||||  |||||| | | |||||||| |||||||||||||||||||||     
T  19176588 atttgtgctcttttggtggatcggaggtcgcaagg-ttgtggaagctgcatgatccttttcggtcaggtgctcttcgtaatgtggctcagcttgggtgtc 19176686  T
Q  198 ggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||||| |||| |||||||||||||||||||||||  ||||||||||||||| |||  |||||||||||| |||||||| ||||||| ||||    
T  19176687 ggggtctgggtgttttattttgagggtgttctttaggggtgagtagtgacgatggatggtggtggatactgtgtttactgtgcttgttttt 19176777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 2394348 - 2394084
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||||||||||| || |||||| ||||||||          
T  2394348 gggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtcttaagttggtttttggg------ 2394255  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
               ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |  |||||| ||||||||||||||||||||||||||    
T  2394254 -----------tcggtggatcggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggg 2394166  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgctt 281  Q
    || | ||||||||||||||  |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  2394165 gtctaggagttttattttgtaggtgttatttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgctt 2394084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 43012372 - 43012648
Alignment:
Q  12 taatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggttt-gtgttgtgctct 110  Q
    |||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || |||||||||    
T  43012372 taatttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgagcttttgttttgtgctct 43012471  T
Q  111 ttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagt 210  Q
    |||||||  || |||||||||||||| |||  || ||||||||| |||||| | | |||||||||||||||||||||||||||||||||||| | |||||    
T  43012472 ttcggtgaatcagaggtcgcgaggtt-gtggaagttgcatgatcgttcggtcaggtgctcttcgaaatgtggctcagcttgggtgttggggtctaggagt 43012570  T
Q  211 tttattttgagggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||| |||||||||||||||||  ||||||||||| || ||| ||| ||||||||||||||||||| |||||| ||||    
T  43012571 tttaatttgagggtgttctttggaggtgagtagtggcgatggacgggggtggataccgtgtttacaatgcttgttttt 43012648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 9584148 - 9583863
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || ||||||||  ||||    
T  9584148 gggtgccctgctaatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtctcaagatggtttttgggcttttg 9584049  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||| ||||||||||| |||||||| |||||| |||||| ||  ||| ||||||||||| | |||||||||||| |||||||| |||||||| ||||    
T  9584048 ttttgtgatctttcggtggatcggaggttgcgagg-ttgtga-agtcgcacgatccttcggtcaggcgctcttcgaattgtggctctgcttgggttttgg 9583951  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||| ||||||||||||||||||| |||||||||  |||||||||||||| | |||||||||||||| ||||||||| ||||||| ||||    
T  9583950 ggtctgggagttttattttgaggatgttctttg-cggtgagtagtgacgataggcggtggtggatatcgtgtttacggtgcttgttttt 9583863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 62 - 287
Target Start/End: Original strand, 53247947 - 53248174
Alignment:
Q  62 gagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggt 161  Q
    |||||| |||||||| |||||||| ||||| |  ||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||    
T  53247947 gagtcaattctttgattcaagttggtttttagattttgtgttgtgctctttcggtggattggaggtcgcgaggtttgtgatagttgtatgatccttcggt 53248046  T
Q  162 taagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggag-ttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggt 259  Q
    || | ||||||||||||||||||||| |||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  53248047 tatgtgctcttcgaaatgtggctcagtttgggtgttggggtctgagagtttttattttgagagtgttctttgtgggtgagtagtgacgatgggcggtggt 53248146  T
Q  260 ggataccgtgtttacagtgcttgatttt 287  Q
    || |||||||||||||||||||| ||||    
T  53248147 ggttaccgtgtttacagtgcttgttttt 53248174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 40023667 - 40023389
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||| ||||||||  ||||    
T  40023667 gggtgccctgctgattttgttttaaagtctggtggaccgatcacttttgattcgagatcgggagtcgattctttggcttaagttggtttttgggcttttg 40023568  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| || |||| || |||| |||||  ||||||||| || |||||||| | ||| |||| |||||||||||||| ||||||||     
T  40023567 ttttgtgctctttcggtggatcagaggacgggagg-ttgtggaagctgcatgttcattcggttaggagcttttcg-aatgtggctcagctagggtgttgt 40023470  T
Q  200 ggtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttacagtg 278  Q
     || ||||||||||||||||| ||| |||||||  || |||||||||||| |||  ||| |||||||||||||||||||||    
T  40023469 agtctgggagttttattttgaggggcgttcttttgggatgagtagtgacgatggatggttgtggataccgtgtttacagtg 40023389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 23328445 - 23328198
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttg-gggtttg 99  Q
    |||||||||| | |||||||  || ||| |||||||||||||||||||||||||||||||||||| || | |||| ||||||||| |||||| |  ||||    
T  23328445 gggtgccctgttgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgggagttagctttttggctcaagttggtttttgagcttttg 23328346  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| |||||||||| |||| |||||  |||| | || || |||||||| | ||| |||| |||||||||||||||||||||||     
T  23328345 ttttgtgctctttcggtggatcggaggtcgagagg-ttgtggaagctccttgttcattcggttaggagcttttcg-aatgtggctcagcttgggtgttga 23328248  T
Q  200 ggtatgggagttttattttgag-ggtgttctttgtgggtgagtagtgacg 248  Q
     || |||||||||||||||||| ||||||||||| |||||||||||||||    
T  23328247 agtctgggagttttattttgagtggtgttctttgggggtgagtagtgacg 23328198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 45398782 - 45399029
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||| ||||||||  ||||    
T  45398782 gggtgccctgctgatttggatttaaagtctggtggaccgatcacttttgattcgagatcgagagtcagctctttgatttaagttggtttttgggcttttg 45398881  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | || |||||||||| ||| |||||||||| |||| |||||  ||||||||| || |||||||| | ||| |||| |||||||| || ||| |||||||     
T  45398882 ttttatgctctttcgatggatcggaggtcgagagg-ttgtggaagctgcatgttcattcggttatgagcttttcg-aatgtggcgcaacttaggtgttga 45398979  T
Q  200 ggtatgggagttttattttg-agggtgttctttgtgggtgagtagtgacg 248  Q
     || |||||||| |||||||  |||||||| ||| |||||||||||||||    
T  45398980 agtttgggagttctattttgtggggtgttcgttgggggtgagtagtgacg 45399029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 176 - 287
Target Start/End: Complemental strand, 30352359 - 30352249
Alignment:
Q  176 aatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttac 274  Q
    ||||||||||||||||||||||||||| | |||||||  |||| |||||||||||||||| |||||||||||| | || |||||||||||||||||||||    
T  30352359 aatgtggctcagcttgggtgttggggtctcggagttt--tttttagggtgttctttgtggatgagtagtgacgatgggtggtggtggataccgtgtttac 30352262  T
Q  275 agtgcttgatttt 287  Q
    ||| |||| ||||    
T  30352261 agtacttgttttt 30352249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14193926 - 14194009
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  || ||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  14193926 gggtgcccttctgatttggtcctaaagtctggcggaccgatcacttttgattcgagattgggagtcggttctttggctcaagtt 14194009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 33144019 - 33143910
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaag-ttgatttttggggtttgtgttgtgctctttcggtggttcgga 124  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||  |||||||| ||| | | ||  ||||||||||| || ||    
T  33144019 agtctggtggatcgatcacttttgattcgagatcgggagtcagttctttggatcaagattagtttttgggctttttatggt-ttctttcggtggatcaga 33143921  T
Q  125 ggtcgcgaggt 135  Q
    |||||||||||    
T  33143920 ggtcgcgaggt 33143910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5556556 - 5556639
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||  | ||||||| || |||||||||||  ||||| ||||||||||||||||||||||||||||||||  |||||||    
T  5556556 gggtgcccttttgatttggtcttgtagtctggtggggcgatcgcttttgattcgagatcgggagtcagttctttggttcaagtt 5556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 47945717 - 47945815
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggag 125  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||   ||||||| ||| | | ||| |||||||||||| |||||    
T  47945717 agtccggtgggccgatcacttttgattcgagatcgggagtcagttatttggctcaagtttgattttgggcttt-tatggtgttctttcggtggtccggag 47945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 14755335 - 14755286
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  14755335 agtctggtgggccgatcacttttgattcaagatcgggagtcagttctttg 14755286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14879421 - 14879504
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || ||| |||  || |||||||||| |||||||||||||||||||||||||||||| |||| |||  |||||||    
T  14879421 gggtgcccttctgattgggtcctaaagtctggtgggccgatcacttttgattcgagatcgggagtctgttcgttggatcaagtt 14879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 30127273 - 30127332
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttct-ttgactcaagtt 84  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  30127273 agtctggtgagccgatcgcttttgattcgagatcgggagtcagttctcttgactcaagtt 30127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 37123397 - 37123442
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  37123397 tggtgggccgatcacttttgattcgagattgggagtcagttctttg 37123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 39021342 - 39021297
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||    
T  39021342 tggtgggccgatcacttttgattcgaggtcgggagtcagttctttg 39021297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 20710778 - 20710740
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggag 64  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  20710778 agtctggtgggccgatcacttttgattcgagatcgggag 20710740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 24099397 - 24099348
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||| ||||    
T  24099397 agtctggtgggccgatcacttttgattcgatatcgggaatcagttttttg 24099348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 31424247 - 31424304
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagt 83  Q
    |||||||| | ||| || |||||||||||||||||||||||||| |||||| ||||||    
T  31424247 agtctggtaggccggtcgcttttgattcgagatcgggagtcagtgctttgattcaagt 31424304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 1652950 - 1652898
Alignment:
Q  32 gtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||  |||||||    
T  1652950 gtgggccgatcacttttgattcgagatcaggagttagttctttggttcaagtt 1652898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 823494 - 823447
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||||| ||||||||| ||| | |||||||    
T  823494 ccgatcacttttgattcgagatcgagagtcagttgtttcattcaagtt 823447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25647670 - 25647753
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||||||  || ||||||  || || ||||||||||||||||||||||||||  |||||||| || |||||    
T  25647670 gggtgcccttctgatttggtcctaaagtctgacgggcctatcacttttgattcgagatcgggagttggttctttggcttaagtt 25647753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 2782139 - 2782081
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||  |||||||||||||||  |||||||||| ||||| ||||||| |||||    
T  2782139 agtctggtgggacgatcacttttgattttagatcgggagccagttttttgactaaagtt 2782081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 19295935 - 19295877
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| || |||||||||||||||| ||||| ||| ||||  ||||||||||||    
T  19295935 agtctggtgggcctatcacttttgattcgatatcggaagttagtttcttgactcaagtt 19295877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 287
Target Start/End: Original strand, 18593232 - 18593516
Alignment:
Q  4 tgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgtt 103  Q
    |||||||||||||||||  |||||| | |||| | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||    
T  18593232 tgccctgctaatttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttagttctttgactcaagttggtttttgggcttagtgtt 18593331  T
Q  104 gtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggta 203  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| | | |||||||||||||||||| |||||||||||||||     
T  18593332 gtgctctttcggtggttcggaggtcgcgagatttgtgataggtgcatgatccttcggttaggtgttcttcgaaatgtggctcaacttgggtgttggggtc 18593431  T
Q  204 tgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  18593432 tgggagttttatttggaggatgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacagtgcttgttttt 18593516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 3 - 275
Target Start/End: Original strand, 34378086 - 34378359
Alignment:
Q  3 gtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgt 102  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| |    
T  34378086 gtgccctgctaatttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgacacaagttggtttttgggctttgttt 34378185  T
Q  103 tgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggt 202  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||  ||||||||||||||   |||||||| |||||||||||||||||||||||||||    
T  34378186 tgtgctctttcggtggaccggaggtcgcgaggtttgtgatagttgtttgatccttcggttagatgctcttcgtaatgtggctcagcttgggtgttggggt 34378285  T
Q  203 atgggagttttattttgagggtgttctttgtgggtgagtagtgacgttgg-cggtggtggataccgtgtttaca 275  Q
     || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  34378286 ttgagagttttattttgagggtgttctttgtgggtgagtagtgacgatggacggtggtggataccgtgtttaca 34378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 698347 - 698614
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||    
T  698347 gggtgccctgctaatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaactctttgactcaagttggtttttgggctttgt 698446  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||| ||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||    
T  698447 gttgtactctttctgtggttcagaggttgcgaggtttgtgatagctgcataatccttcggttaggtgctctttgaaatgtggctcagcttgggtgttggg 698546  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccg 267  Q
    || || ||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  698547 gtctgagagttttatttggagggtgttctttgtgggtgagtagtgacgatcggcgatggtggataccg 698614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 29087467 - 29087752
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggg-gtttg 99  Q
    |||||| |||||| ||||||  || |||||||||||| |||| |||||||||||||||| |||||||||||||||| |||| ||| ||| ||||  ||||    
T  29087467 gggtgctctgctattttggttctaaagtctggtggactgatcccttttgattcgagatcaggagtcagttctttgaatcaaattggtttctgggcttttg 29087566  T
Q  100 tgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttgg 199  Q
    | ||||||||||||||||| ||||||||||||||| || || ||||| |||||||||| ||| | | ||||||||  |||||||||| ||| | ||||||    
T  29087567 ttttgtgctctttcggtggatcggaggtcgcgagg-ttatggtagctccatgatcctttggtcaggtgctcttcg-tatgtggctcaacttagatgttgg 29087664  T
Q  200 ggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    ||| |||||| |||||||||||||| ||||||  ||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||    
T  29087665 ggtctgggagctttattttgagggt-ttctttaggggtgagtagtgacgatgggcggtggtgaataccgtgtttacagtgcttgttttt 29087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 287
Target Start/End: Complemental strand, 7161969 - 7161824
Alignment:
Q  143 agctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagta 242  Q
    ||||||||||||||| ||| | | | ||||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  7161969 agctgcatgatcctttggtcaggtgttcttcgatatgtggctcagcttgtgtgttggggtctgggagttttattttgatggtgttctttgggggtgagta 7161870  T
Q  243 gtgacgtt-ggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||| || ||||||||| | ||||||||||||||||| ||||    
T  7161869 gtgacgttgggtggtggtggaaatcgtgtttacagtgcttgttttt 7161824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 87 - 287
Target Start/End: Complemental strand, 18313651 - 18313451
Alignment:
Q  87 tttttggggtttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctca 186  Q
    |||||||  |||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||| |    
T  18313651 tttttggactttgtgttgtactctttcggtggattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 18313552  T
Q  187 gcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgtttacagtgcttgatt 285  Q
    | |||||| || || | | |||||||| | || |||||||||||  |||||||||||||||| || | |||| |||||| ||||||||| ||| ||| ||    
T  18313551 gtttgggttttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgagtggtgatggatatcgtgtttacggtgtttgttt 18313453  T
Q  286 tt 287  Q
    ||    
T  18313452 tt 18313451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7392126 - 7392052
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    ||||||||| || |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7392126 gggtgcccttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 7392052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 7162353 - 7162276
Alignment:
Q  60 gggagtcagttctttgactcaagttgatttttggg-gtttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 136  Q
    |||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||| ||| |||||||||||||||||    
T  7162353 gggagtcagttctttgactcaagttggtttttgggtttttgttttgtgctctttcgatggatcggaggtcgcgaggtt 7162276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7195334 - 7195251
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || ||||||   || |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7195334 gggtgcccttctgatttggccataaagtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 7195251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 22675394 - 22675336
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  22675394 agtctggtggaccgatcgattttgattcgagatcgggagtcagttctttggctcaagtt 22675336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 13954304 - 13954246
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  13954304 agtctggtgggccgatcacttttgattcgagatcgggagtcattactttggctcaagtt 13954246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 39184256 - 39184208
Alignment:
Q  27 gtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  39184256 gtctggtgggccgatcacttttgattcgagatcggaagtcagttctttg 39184208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 23426355 - 23426402
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctt 73  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  23426355 agtctggtggaccgaacacttttgattcgagattgggagtcagttctt 23426402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24072361 - 24072237
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||| || |||||||  || |||||||| | | |||| ||||||||| |||||||| |||||||||||||  |||||||||  |||||||||| |    
T  24072361 gggtgcccttctgatttggtcctaaagtctggttggctgatcgcttttgatttgagatcggaagtcagttctttggttcaagttga--tttggggttttt 24072264  T
Q  101 gttgtgctctttcggtggttcggaggt 127  Q
     | ||| |||||||||||  |||||||    
T  24072263 ttggtgttctttcggtggaccggaggt 24072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8730903 - 8730977
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||  | ||||||| ||  ||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  8730903 gggtgcccttatgatttggtcttgcagtctggtggacctatcgcttttaattcgagatcgggagtcagttctttg 8730977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 14302500 - 14302368
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgtgttgtgctctttcggtggttcggag 125  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||   ||||||   ||||||| ||| | | ||  ||||||||||| ||||||    
T  14302500 agtctggtggactgatcacttttggttcgagattgggagtcagttctttggagcaagtttggttttgggctttttatggt-ttctttcggtggatcggag 14302402  T
Q  126 gtcgcgaggtttgtgatagctgcatgatccttcgg 160  Q
    |||| |||| | |||  |||||||||||| |||||    
T  14302401 gtcgagagg-tggtggaagctgcatgatctttcgg 14302368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 21402903 - 21402853
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttgactca 80  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  21402903 tggtgggccgatcacttttagttcgagatcgggagtcagttctttgactca 21402853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 26046034 - 26045976
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| |||||||||||||||||||||||||||||| |||  |||| ||||||||    
T  26046034 agtctggtgaaccgatcacttttgattcgagatcgggagttagtgttttggctcaagtt 26045976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 33258952 - 33258903
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  33258952 agtctggtgggccgatcacttttgattcgagatcaggagttagttctttg 33258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 8297498 - 8297537
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8297498 ttttgattcgagatcgggagtcagttctttggctcaagtt 8297537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 25991995 - 25992066
Alignment:
Q  3 gtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttcttt 74  Q
    ||||||| ||| ||||||  || |||||||||| || ||| ||||||||||||||||| |||||||||||||    
T  25991995 gtgcccttctattttggtgctaaagtctggtgggccaatcgcttttgattcgagatcgagagtcagttcttt 25992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 27713080 - 27713138
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||| |||| ||||||  ||||||||||||||||||| ||||||||||| ||||||||    
T  27713080 agtctagtgggccgatcgtttttgattcgagatcgggaatcagttctttggctcaagtt 27713138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 28765670 - 28765614
Alignment:
Q  28 tctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||  |||||||||||||||||||||| |||||||||  |||||| |||||    
T  28765670 tctggtggattgatcacttttgattcgagatcgagagtcagtttcttgacttaagtt 28765614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17854162 - 17854079
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| |||||||||| ||  ||| |||||| |||| | ||||||| |||||||||||||||| || ||||  |||||||    
T  17854162 gggtgcccttctaatttggtcttgaagtatggtgggccgaccgcttttgactcgagatcgggagtcaattatttggttcaagtt 17854079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 31721699 - 31721734
Alignment:
Q  37 ccgatcacttttgattcgagatcgggagtcagttct 72  Q
    |||||| |||||||||||||||||||||||||||||    
T  31721699 ccgatcgcttttgattcgagatcgggagtcagttct 31721734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 12046270 - 12046308
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcag 68  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  12046270 tggtgggccgatcacttttgattcgagatcgggactcag 12046308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 39024502 - 39024462
Alignment:
Q  44 cttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  39024502 cttttgattcgagatcgggagtcacttctttggttcaagtt 39024462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 3117479 - 3117766
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||||||||||||| |  |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  3117479 gggtgccctgctaatttgttgatatagtatggtgggccgatcacttttgattcaagatcgggagtcagttctttgactcaagttggtttttgggctttgt 3117578  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||    
T  3117579 gttgtgctctttatgtggttcggaggtcgcgaggtttgtgatagttgcatgatccttcgattatgtgctcttcgaaatgtggctcaacttgggtgttggg 3117678  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgttg-gcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || ||||||||||||||  |||||||||||||||||| ||||| |||| || |||||||||| |||||||||||||||||||| ||||    
T  3117679 gtctgggagttttatttatagggtgttctttgtgggtaagtagagacgatgagcggtggtggttaccgtgtttacagtgcttgttttt 3117766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 10541967 - 10542105
Alignment:
Q  150 tgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg- 248  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||||||||||||||||||||     
T  10541967 tgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctggaagttttatttggagggtattctttgtgggtgagtagtgacga 10542066  T
Q  249 ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    | |||||||||||||||||| |||| |||||||| ||||    
T  10542067 tgggcggtggtggataccgtatttaaagtgcttgttttt 10542105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 14663231 - 14663344
Alignment:
Q  169 tcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccg 267  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||  |    
T  14663231 tcttcgaaatgtggctcggcttggatgttggggtttgggagttttattttgaggatgttctttgcgggtgagtagtgacgatgggcggtggtggatattg 14663330  T
Q  268 tgtttacagtgctt 281  Q
    ||||||||||||||    
T  14663331 tgtttacagtgctt 14663344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16510396 - 16510304
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttgg 93  Q
    ||||||||||||||||||||  || ||||| |||| |||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||    
T  16510396 gggtgccctgctaatttggttctaaagtctagtgggccgatcacttttgattcgagattgagagtcagttcttttactcaagttggtttttgg 16510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 32935409 - 32935351
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  32935409 agtctggtgggccgatcgcttttgattcgagatcgggagtcagttcttggactcaagtt 32935351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 26216089 - 26216042
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctt 73  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  26216089 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctt 26216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20701898 - 20701765
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||| || |||||||  | ||| ||||||  ||||||||||||||||||||||||||||| ||||||||| || |||||   ||||||| ||| |    
T  20701898 gggtgcccttctgatttggtcatttagactggtgtgccgatcacttttgattcgagatcgggagttagttctttggcttaagtttggttttgggcttttt 20701799  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggt 135  Q
     | ||  ||||||||||| |||||||||| |||||    
T  20701798 atggt-ttctttcggtggatcggaggtcgagaggt 20701765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 13423482 - 13423535
Alignment:
Q  31 ggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  13423482 ggtggaccgatcacttttgattcgagatcgagagtcggttctttggctcaagtt 13423535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 26534789 - 26534742
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctt 73  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  26534789 agtctggtgggccgatcacttttgattcgagattgggagtcagttctt 26534742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 34105428 - 34105479
Alignment:
Q  30 tggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaa 81  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  34105428 tggtgggccgatcacttttgattcgagatcgggagtcagtttcttgactcaa 34105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9224027 - 9224101
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||  ||| |||||  || |||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  9224027 gggtgcccttttaagttggtcctaaagtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttg 9224101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 7546499 - 7546464
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgg 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  7546499 agtctggtggaccgatcacttttgattcgagatcgg 7546464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 33968670 - 33968625
Alignment:
Q  39 gatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||    
T  33968670 gatcgcttttgattcgagatcgggagtcagttctttggttcaagtt 33968625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 32316393 - 32316437
Alignment:
Q  40 atcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||    
T  32316393 atcacttttgattcgagatcggtagtaagttctttgattcaagtt 32316437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 34090374 - 34090418
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagtt 70  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||    
T  34090374 agtctggtgggtcgatcaattttgattcgagatcgggagtcagtt 34090418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 34092806 - 34092864
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||  |||||||||||||||||||||| || ||||  |||||||| |||||||    
T  34092806 agtctggtgagccgatcacttttgattcgagataggaagtctattctttgattcaagtt 34092864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 21266127 - 21266168
Alignment:
Q  29 ctggtggaccgatcacttttgattcgagatcgggagtcagtt 70  Q
    ||||||| |||||| |||||||||||||||||||||| ||||    
T  21266127 ctggtgggccgatcgcttttgattcgagatcgggagttagtt 21266168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 12129228 - 12129264
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcggg 62  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  12129228 agtctgatggtccgatcacttttgattcgagatcggg 12129264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 12794125 - 12794173
Alignment:
Q  26 agtctggtggaccgatca-cttttgattcgagatcgggagtcagttctt 73  Q
    ||||| |||| ||||||| |||||||||||||||| |||||||||||||    
T  12794125 agtctagtgggccgatcaacttttgattcgagatcaggagtcagttctt 12794173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 35866 - 35583
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    |||||||  |||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||| |    
T  35866 gggtgcctagctaatttggttatatagtctagtgggccgatcacttttgattcgagatcgggagtca-ttctttgacttaagttggtttttgggctttat 35768  T
Q  101 gttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggg 200  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||||||||||||    
T  35767 gttgtgctctttcggtggatcggaggtcacgagatttgtgatagctgcatgatccatcggttaggtgctcttcgaaatgaggctcagcttgggtgttggg 35668  T
Q  201 gtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcggtggtggataccgtgtttacagtgcttgatttt 287  Q
    || |||||||||  |||| || |||||||| |  ||||||| |||||| | ||| ||||||||||| |||||||||||||||| ||||    
T  35667 gtgtgggagttt--tttttagagtgttcttagcaggtgagt-gtgacgatgggcagtggtggatactgtgtttacagtgcttgttttt 35583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 57 - 287
Target Start/End: Original strand, 5747 - 5979
Alignment:
Q  57 atcgggagtcagttctttgactcaagttgatttttggggtttgtgtt-gtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatcc 155  Q
    |||||||||||||||||||||||| |||| |||||||| ||||| || ||||||||||||| | ||||||||||| ||||||||||||||| | ||||||    
T  5747 atcgggagtcagttctttgactcaggttggtttttgggctttgtttttgtgctctttcggtagatcggaggtcgcaaggtttgtgatagctacttgatcc 5846  T
Q  156 ttcggttaagcgctcttcgaaatgtggctcagcttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtagtgacg-ttggcg 254  Q
    |||||||| | |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| | | || |    
T  5847 ttcggttaggtgctcttcgtaatgtggctcagcttgggtgttgggatctgggagttttattttgagggtgttttttgtgggtgagtagtgatgatgggag 5946  T
Q  255 gtggtggataccgtgtttacagtgcttgatttt 287  Q
    |||||||||||| ||||||| ||||||| ||||    
T  5947 gtggtggataccatgtttacggtgcttgttttt 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19369 - 19496
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagttgatttttggggtttgt 100  Q
    ||||||||| || |||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||   ||||||| ||| |    
T  19369 gggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggcttttt 19468  T
Q  101 gttgtgctctttcggtggttcggaggtcg 129  Q
     | ||  ||||||||||| ||||||||||    
T  19469 atggt-ttctttcggtggatcggaggtcg 19496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42233 - 42150
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    ||||||||| || |||| ||  || |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  42233 gggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtt 42150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36693 - 36773
Alignment:
Q  1 gggtgccctgctaatttggtattatagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaa 81  Q
    ||||||||| || |||||||  || ||||||| || | ||||||||||||||||||||||||||||||||||||| |||||    
T  36693 gggtgcccttctgatttggtcctaaagtctggcgggctgatcacttttgattcgagatcgggagtcagttctttgtctcaa 36773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 1087 - 1038
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttg 75  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  1087 agtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 3841 - 3896
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaa 81  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||    
T  3841 agtctggtgggccgatcaattttgattcgagatcgggagtcagtttcttgactcaa 3896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 8140 - 8198
Alignment:
Q  26 agtctggtggaccgatcacttttgattcgagatcgggagtcagttctttgactcaagtt 84  Q
    |||||||||  |||||||||||||||||||||| || ||||  |||||||| |||||||    
T  8140 agtctggtgagccgatcacttttgattcgagataggaagtctattctttgattcaagtt 8198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 19113 - 19177
Alignment:
Q  211 tttattttgagggtgttctttgtgggtgagtagtgacgttggcggtggtggataccgtgtttacagt 277  Q
    |||||||||||||||||| |||||||||||||||||  |  |||||||| |||||||||||||||||    
T  19113 tttattttgagggtgttcattgtgggtgagtagtga--tgagcggtggtagataccgtgtttacagt 19177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 10452 - 10412
Alignment:
Q  45 ttttgattcgagatcgggagtcagttctttgactcaagttg 85  Q
    |||||||||||||||| |||||||||  |||||||||||||    
T  10452 ttttgattcgagatcgagagtcagtttcttgactcaagttg 10412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University