View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1715_high_177 (Length: 242)
Name: NF1715_high_177
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_high_177 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 8548111 - 8547870
Alignment:
| Q |
1 |
ttcctaatcatttcaccgcaaaaagtgttttacaattataaaaagagcaatgctattcattccgagatattttatcctgagagaatgacaaaatgcatta |
100 |
Q |
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| T |
8548111 |
ttcctaatcatttcaccgcaagaagtgttttacaattataaaaagggcaatgctattcatcccgagatattttatcctgagagaatgacaaaatgcatta |
8548012 |
T |
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| Q |
101 |
agccaattaaatttctttatcagcggaaaacataagattcatgggtgcagtttaagaaatgcatagaaataaatacacggtcgtgaaatattcggtgaat |
200 |
Q |
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| T |
8548011 |
agccaattaaatttctttatcagcggaaaacataagattcatgggtgcagtttaagaaatgcatataaataaataaacggtcgtgaaatattcggtggat |
8547912 |
T |
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| Q |
201 |
tttctctcgcgataaacagcaatttccttataaaaatttcaa |
242 |
Q |
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| T |
8547911 |
tttctctcgcgataaacagcaatttccttataaaaatttcaa |
8547870 |
T |
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