View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1715_high_215 (Length: 222)
Name: NF1715_high_215
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_high_215 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 39275565 - 39275775
Alignment:
| Q |
1 |
gcaaattatgagtgatttaacattgaaatttcttttatatttatagtaaatttaaattaaatagtttccacctctcaaaattaaatattttctaannnnn |
100 |
Q |
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| T |
39275565 |
gcaaattatgagtgatttaacattgaaatttcttttatatttatagtacatttaaattaaatagtttccacctctcaaaattaaatattttctaattttt |
39275664 |
T |
|
| Q |
101 |
nnagctaaatatattttctaatttatgctaaactaaaatcaatgggatgcgtcagtttgaatagaagctgttacatgtgatttcatttgggtgtcatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39275665 |
ttagctaaatatattttctaatttatgctaaactaaaatcaatgggatgcgtcagtttgaatagaagctgttacatgtgatttcatttgggtgtcatttg |
39275764 |
T |
|
| Q |
201 |
cctttgttctt |
211 |
Q |
| |
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||||||||||| |
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| T |
39275765 |
cctttgttctt |
39275775 |
T |
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