View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1715_high_231 (Length: 204)
Name: NF1715_high_231
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_high_231 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 48483422 - 48483593
Alignment:
| Q |
20 |
caaagagtttccccatattataaaaacaaattagcaatggataaacaaatacaaccgcagcataaaaattaaaaggggaaaggggccatttaaatggtaa |
119 |
Q |
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| T |
48483422 |
caaagagtttccccatattataaaaacaacttagcaatggataaaaaaatacaaccgcagcataaaaattaaaaggggaaaggggccatttaaatggtaa |
48483521 |
T |
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| Q |
120 |
gttgacaatgctaggacttcaaacatatgccaaaggaaacttatgaacacatcataaatttataagttcatc |
191 |
Q |
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||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
48483522 |
gttgacaatgctaggacttcaaacataagccaaaggcaacttatgaacacatcataaatttataagttcatc |
48483593 |
T |
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