View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1715_low_116 (Length: 319)

Name: NF1715_low_116
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1715_low_116
NF1715_low_116
[»] chr4 (84 HSPs)
chr4 (212-308)||(18922072-18922168)
chr4 (214-308)||(30739363-30739457)
chr4 (1-99)||(53865195-53865293)
chr4 (1-94)||(8165761-8165854)
chr4 (1-101)||(41025053-41025154)
chr4 (1-92)||(54895535-54895626)
chr4 (1-94)||(17109718-17109811)
chr4 (3-98)||(36309571-36309666)
chr4 (1-94)||(12722736-12722830)
chr4 (1-98)||(2124339-2124436)
chr4 (1-95)||(31762927-31763021)
chr4 (13-98)||(25715638-25715723)
chr4 (1-94)||(33883293-33883386)
chr4 (1-93)||(38010662-38010754)
chr4 (1-97)||(38563801-38563897)
chr4 (1-89)||(51076901-51076989)
chr4 (1-94)||(6841820-6841913)
chr4 (38-99)||(21995664-21995725)
chr4 (1-94)||(53526404-53526497)
chr4 (38-94)||(1492671-1492727)
chr4 (38-94)||(2124534-2124590)
chr4 (38-94)||(12722927-12722983)
chr4 (38-94)||(25715716-25715772)
chr4 (2-94)||(30779342-30779434)
chr4 (38-94)||(31763097-31763153)
chr4 (42-98)||(37059706-37059762)
chr4 (38-94)||(43374446-43374502)
chr4 (38-94)||(54895403-54895459)
chr4 (12-90)||(9967685-9967762)
chr4 (1-94)||(1492813-1492906)
chr4 (38-94)||(562774-562830)
chr4 (42-90)||(36309419-36309467)
chr4 (38-94)||(36924240-36924296)
chr4 (2-94)||(43375474-43375566)
chr4 (1-96)||(8157108-8157202)
chr4 (50-97)||(33819687-33819734)
chr4 (48-94)||(17109917-17109963)
chr4 (42-91)||(8157282-8157331)
chr4 (38-91)||(33883472-33883525)
chr4 (1-73)||(9812965-9813037)
chr4 (42-94)||(9813138-9813190)
chr4 (38-94)||(16475009-16475065)
chr4 (137-173)||(30739497-30739533)
chr4 (140-175)||(18922000-18922035)
chr4 (34-88)||(562931-562985)
chr4 (49-99)||(22180200-22180250)
chr4 (1-94)||(36924393-36924489)
chr4 (42-92)||(55660435-55660485)
chr4 (38-99)||(6806469-6806530)
chr4 (49-94)||(45256895-45256940)
chr4 (248-285)||(45637625-45637662)
chr4 (1-66)||(47568037-47568102)
chr4 (38-91)||(53526253-53526306)
chr4 (42-90)||(10374046-10374094)
chr4 (51-99)||(10473650-10473698)
chr4 (1-57)||(27872856-27872912)
chr4 (38-90)||(37059904-37059956)
chr4 (38-94)||(38563950-38564006)
chr4 (38-94)||(47567895-47567951)
chr4 (38-94)||(53865063-53865119)
chr4 (1-48)||(4169042-4169089)
chr4 (49-92)||(11786104-11786147)
chr4 (49-92)||(11798271-11798314)
chr4 (49-92)||(13635618-13635661)
chr4 (49-92)||(15051029-15051072)
chr4 (51-94)||(26577260-26577303)
chr4 (49-92)||(30358837-30358880)
chr4 (49-92)||(30597829-30597872)
chr4 (38-89)||(42788664-42788715)
chr4 (49-92)||(49425950-49425993)
chr4 (49-92)||(50644670-50644713)
chr4 (1-43)||(10374196-10374238)
chr4 (249-283)||(48341113-48341147)
chr4 (49-91)||(49492406-49492448)
chr4 (49-90)||(638994-639035)
chr4 (248-285)||(8815548-8815585)
chr4 (240-285)||(42527219-42527264)
chr4 (36-72)||(6806546-6806582)
chr4 (38-94)||(8166067-8166123)
chr4 (245-285)||(13608819-13608859)
chr4 (50-94)||(21098133-21098177)
chr4 (242-282)||(22495229-22495269)
chr4 (54-94)||(33871283-33871323)
chr4 (1-57)||(42788510-42788566)
[»] chr5 (63 HSPs)
chr5 (215-308)||(7465376-7465469)
chr5 (213-308)||(12564755-12564850)
chr5 (215-308)||(16143507-16143600)
chr5 (1-94)||(20134198-20134291)
chr5 (2-94)||(15059586-15059679)
chr5 (1-98)||(22830740-22830837)
chr5 (1-98)||(35662185-35662282)
chr5 (1-94)||(11660792-11660885)
chr5 (5-94)||(22695496-22695585)
chr5 (1-93)||(39861579-39861671)
chr5 (1-90)||(5630223-5630312)
chr5 (1-94)||(16552246-16552339)
chr5 (1-97)||(7286906-7287001)
chr5 (1-91)||(703732-703822)
chr5 (1-98)||(36864220-36864317)
chr5 (38-94)||(35662066-35662122)
chr5 (38-94)||(39861769-39861825)
chr5 (38-93)||(11660971-11661026)
chr5 (1-92)||(25671240-25671331)
chr5 (1-94)||(3340731-3340824)
chr5 (38-94)||(20134388-20134444)
chr5 (1-93)||(22671949-22672041)
chr5 (1-92)||(39166152-39166243)
chr5 (38-92)||(23155526-23155580)
chr5 (38-99)||(3340584-3340645)
chr5 (38-99)||(39086511-39086572)
chr5 (38-102)||(36864058-36864122)
chr5 (38-94)||(42746518-42746574)
chr5 (41-100)||(20696319-20696378)
chr5 (5-91)||(23155799-23155885)
chr5 (1-91)||(39086658-39086748)
chr5 (42-94)||(5411749-5411801)
chr5 (42-94)||(15559048-15559100)
chr5 (1-94)||(20696123-20696220)
chr5 (1-73)||(33857374-33857446)
chr5 (38-94)||(39166329-39166385)
chr5 (140-175)||(7465311-7465346)
chr5 (1-72)||(11376402-11376473)
chr5 (1-47)||(13363550-13363596)
chr5 (38-96)||(42746832-42746890)
chr5 (13-98)||(15559097-15559182)
chr5 (245-282)||(18908439-18908476)
chr5 (42-94)||(7286752-7286804)
chr5 (1-97)||(29947655-29947750)
chr5 (49-92)||(3883928-3883971)
chr5 (243-286)||(8488242-8488285)
chr5 (49-92)||(14394598-14394641)
chr5 (49-92)||(14940249-14940292)
chr5 (1-48)||(25016611-25016658)
chr5 (49-92)||(26637730-26637773)
chr5 (49-92)||(37456810-37456853)
chr5 (247-282)||(42289302-42289337)
chr5 (1-47)||(25016479-25016525)
chr5 (245-283)||(32247073-32247111)
chr5 (1-47)||(35915871-35915917)
chr5 (42-99)||(11376574-11376630)
chr5 (49-94)||(13363794-13363839)
chr5 (61-94)||(25545584-25545617)
chr5 (243-275)||(16518255-16518287)
chr5 (256-308)||(21042154-21042206)
chr5 (242-286)||(25942474-25942518)
chr5 (48-92)||(30783586-30783630)
chr5 (253-285)||(34177906-34177938)
[»] chr2 (48 HSPs)
chr2 (212-308)||(1997540-1997636)
chr2 (1-98)||(30777290-30777387)
chr2 (1-98)||(42364645-42364742)
chr2 (1-94)||(20661395-20661488)
chr2 (1-94)||(22596303-22596396)
chr2 (1-94)||(12449053-12449146)
chr2 (1-94)||(25575322-25575415)
chr2 (1-98)||(37867307-37867404)
chr2 (245-308)||(40426770-40426833)
chr2 (1-98)||(16111656-16111754)
chr2 (1-94)||(22588317-22588410)
chr2 (38-99)||(31783787-31783848)
chr2 (5-92)||(34726605-34726692)
chr2 (1-94)||(19246814-19246907)
chr2 (38-99)||(31711504-31711565)
chr2 (1-93)||(31711651-31711742)
chr2 (38-93)||(20661584-20661639)
chr2 (1-94)||(31783934-31784030)
chr2 (38-99)||(22596493-22596554)
chr2 (42-99)||(34726789-34726846)
chr2 (38-98)||(15252834-15252894)
chr2 (38-94)||(15253009-15253065)
chr2 (38-94)||(20194016-20194072)
chr2 (38-94)||(42364491-42364547)
chr2 (38-94)||(44915480-44915536)
chr2 (137-175)||(1997673-1997711)
chr2 (38-91)||(19246664-19246717)
chr2 (42-99)||(37867148-37867205)
chr2 (1-94)||(44915290-44915383)
chr2 (34-94)||(15150276-15150336)
chr2 (3-59)||(24183431-24183487)
chr2 (42-94)||(24183590-24183642)
chr2 (1-73)||(35126513-35126585)
chr2 (38-91)||(22588507-22588560)
chr2 (38-94)||(12449232-12449288)
chr2 (49-93)||(25193991-25194035)
chr2 (49-101)||(39355165-39355217)
chr2 (1-72)||(1095200-1095271)
chr2 (49-92)||(7487147-7487190)
chr2 (1-98)||(20570917-20571008)
chr2 (245-308)||(29691291-29691355)
chr2 (51-92)||(1292072-1292113)
chr2 (49-94)||(18297167-18297212)
chr2 (51-92)||(41345088-41345129)
chr2 (38-94)||(23182214-23182270)
chr2 (1-57)||(23225982-23226038)
chr2 (38-94)||(23593471-23593527)
chr2 (48-92)||(34464840-34464884)
[»] chr6 (27 HSPs)
chr6 (213-308)||(15117095-15117190)
chr6 (1-98)||(14237773-14237870)
chr6 (1-98)||(19281278-19281375)
chr6 (1-94)||(21384788-21384881)
chr6 (1-94)||(25119105-25119198)
chr6 (1-100)||(10698570-10698668)
chr6 (1-94)||(22857487-22857580)
chr6 (38-99)||(25119459-25119520)
chr6 (38-94)||(21384978-21385034)
chr6 (38-94)||(22857666-22857722)
chr6 (245-308)||(18672226-18672289)
chr6 (1-99)||(20522663-20522761)
chr6 (38-92)||(20522837-20522891)
chr6 (38-94)||(19284370-19284426)
chr6 (38-99)||(10588942-10589003)
chr6 (38-94)||(7371087-7371143)
chr6 (243-282)||(2189543-2189582)
chr6 (42-99)||(26713167-26713223)
chr6 (49-92)||(6900933-6900976)
chr6 (49-92)||(15493304-15493347)
chr6 (49-92)||(34869956-34869999)
chr6 (24-94)||(129210-129279)
chr6 (49-94)||(878390-878435)
chr6 (51-92)||(7765406-7765447)
chr6 (50-91)||(15034992-15035033)
chr6 (38-94)||(11140445-11140500)
chr6 (51-99)||(25066203-25066251)
[»] chr7 (50 HSPs)
chr7 (1-98)||(34227671-34227768)
chr7 (1-98)||(44426751-44426848)
chr7 (1-94)||(5728832-5728925)
chr7 (1-98)||(46004336-46004433)
chr7 (1-99)||(6620750-6620847)
chr7 (1-94)||(26945513-26945606)
chr7 (1-90)||(32604724-32604813)
chr7 (5-90)||(38837543-38837628)
chr7 (38-94)||(44426597-44426653)
chr7 (1-100)||(41065761-41065860)
chr7 (38-94)||(26945703-26945759)
chr7 (38-94)||(46004524-46004580)
chr7 (1-94)||(7843518-7843611)
chr7 (1-93)||(6846579-6846671)
chr7 (38-94)||(7843708-7843764)
chr7 (38-94)||(38837718-38837774)
chr7 (42-94)||(43742248-43742300)
chr7 (245-308)||(24904925-24904990)
chr7 (1-70)||(31365422-31365491)
chr7 (1-98)||(45478466-45478563)
chr7 (38-94)||(5728624-5728680)
chr7 (38-94)||(6620618-6620674)
chr7 (38-94)||(7845086-7845142)
chr7 (38-94)||(31365270-31365326)
chr7 (38-94)||(34227865-34227921)
chr7 (38-94)||(41065958-41066014)
chr7 (98-133)||(18667780-18667815)
chr7 (49-94)||(15973859-15973904)
chr7 (245-282)||(43026196-43026233)
chr7 (49-94)||(46572573-46572618)
chr7 (38-94)||(924496-924552)
chr7 (50-94)||(11732041-11732085)
chr7 (49-93)||(48692050-48692094)
chr7 (38-77)||(5728696-5728735)
chr7 (49-92)||(30884115-30884158)
chr7 (49-92)||(35737078-35737121)
chr7 (49-92)||(41911005-41911048)
chr7 (49-92)||(46358650-46358693)
chr7 (49-92)||(47340277-47340320)
chr7 (52-91)||(48690902-48690941)
chr7 (50-92)||(16933136-16933178)
chr7 (50-92)||(16938519-16938561)
chr7 (50-92)||(31660200-31660242)
chr7 (38-75)||(31192545-31192582)
chr7 (1-69)||(43742402-43742468)
chr7 (51-92)||(48830601-48830642)
chr7 (245-285)||(9490733-9490773)
chr7 (245-285)||(9628387-9628427)
chr7 (50-94)||(32685843-32685887)
chr7 (48-92)||(33798732-33798776)
[»] scaffold0516 (1 HSPs)
scaffold0516 (1-94)||(1200-1293)
[»] chr3 (57 HSPs)
chr3 (1-98)||(36185721-36185818)
chr3 (1-94)||(8036799-8036892)
chr3 (1-99)||(12974006-12974104)
chr3 (13-99)||(50416528-50416614)
chr3 (1-90)||(21175220-21175309)
chr3 (6-99)||(47225805-47225898)
chr3 (1-98)||(47924157-47924257)
chr3 (13-94)||(19012526-19012607)
chr3 (38-99)||(36185894-36185955)
chr3 (1-94)||(47729208-47729301)
chr3 (38-94)||(50416479-50416535)
chr3 (1-99)||(49053219-49053317)
chr3 (43-94)||(38345279-38345330)
chr3 (38-94)||(8036978-8037034)
chr3 (1-94)||(30795001-30795096)
chr3 (48-99)||(16276663-16276714)
chr3 (13-92)||(27437833-27437912)
chr3 (40-94)||(12974182-12974235)
chr3 (38-91)||(27446202-27446255)
chr3 (49-94)||(47225759-47225804)
chr3 (42-91)||(47924359-47924408)
chr3 (38-99)||(49053415-49053476)
chr3 (38-94)||(16653496-16653551)
chr3 (38-94)||(19012391-19012446)
chr3 (243-282)||(3694596-3694635)
chr3 (38-85)||(30794857-30794904)
chr3 (1-72)||(38345432-38345503)
chr3 (1-71)||(20127023-20127093)
chr3 (245-286)||(3857488-3857529)
chr3 (49-94)||(8719137-8719182)
chr3 (49-94)||(9071024-9071069)
chr3 (49-92)||(3475300-3475343)
chr3 (49-92)||(6097577-6097620)
chr3 (49-92)||(9106397-9106440)
chr3 (49-92)||(9595873-9595916)
chr3 (49-92)||(19284801-19284844)
chr3 (49-92)||(30947804-30947847)
chr3 (61-100)||(51361516-51361555)
chr3 (49-92)||(54379292-54379335)
chr3 (1-47)||(8718883-8718929)
chr3 (1-47)||(9070770-9070816)
chr3 (50-92)||(10986483-10986525)
chr3 (1-47)||(23699859-23699905)
chr3 (1-47)||(23718314-23718360)
chr3 (1-47)||(23736770-23736816)
chr3 (50-92)||(34562400-34562442)
chr3 (49-91)||(50755192-50755234)
chr3 (49-90)||(2941821-2941862)
chr3 (49-94)||(19384380-19384425)
chr3 (61-94)||(27068531-27068564)
chr3 (61-89)||(1377802-1377830)
chr3 (256-308)||(6926162-6926214)
chr3 (51-91)||(8718108-8718148)
chr3 (51-91)||(9069995-9070035)
chr3 (38-94)||(11065433-11065489)
chr3 (38-94)||(20127162-20127218)
chr3 (1-57)||(51681150-51681206)
[»] chr1 (62 HSPs)
chr1 (1-98)||(17893067-17893164)
chr1 (1-98)||(45849103-45849200)
chr1 (213-308)||(50039805-50039900)
chr1 (1-98)||(18952402-18952499)
chr1 (1-97)||(17811235-17811331)
chr1 (1-98)||(18928909-18929004)
chr1 (4-94)||(31763928-31764018)
chr1 (1-94)||(1395303-1395396)
chr1 (1-94)||(33157132-33157225)
chr1 (1-94)||(42133943-42134036)
chr1 (38-98)||(42134122-42134182)
chr1 (1-94)||(14229171-14229264)
chr1 (1-94)||(14389996-14390089)
chr1 (1-98)||(24368568-24368661)
chr1 (1-98)||(29945370-29945465)
chr1 (1-98)||(32595235-32595332)
chr1 (1-94)||(35754720-35754813)
chr1 (1-98)||(46590553-46590650)
chr1 (34-94)||(10974632-10974692)
chr1 (5-93)||(11354324-11354412)
chr1 (38-94)||(14229350-14229406)
chr1 (38-94)||(32595103-32595159)
chr1 (42-94)||(33156991-33157043)
chr1 (1-72)||(12796581-12796652)
chr1 (38-96)||(9628588-9628646)
chr1 (11-93)||(49992680-49992762)
chr1 (1-90)||(15588623-15588711)
chr1 (1-91)||(47693666-47693758)
chr1 (38-94)||(9041040-9041096)
chr1 (38-94)||(14389843-14389899)
chr1 (38-94)||(17893262-17893318)
chr1 (38-94)||(32143758-32143814)
chr1 (38-94)||(49992517-49992573)
chr1 (38-88)||(18928783-18928833)
chr1 (38-94)||(12070599-12070655)
chr1 (38-94)||(31763774-31763830)
chr1 (250-286)||(42786014-42786050)
chr1 (38-94)||(47693855-47693911)
chr1 (43-94)||(12796422-12796473)
chr1 (248-285)||(2653590-2653627)
chr1 (38-94)||(11354500-11354556)
chr1 (242-282)||(17128681-17128721)
chr1 (38-90)||(45849298-45849350)
chr1 (49-92)||(16976085-16976128)
chr1 (1-48)||(23319389-23319436)
chr1 (49-92)||(23817440-23817483)
chr1 (49-92)||(24636056-24636099)
chr1 (49-92)||(43452672-43452715)
chr1 (49-92)||(48762224-48762267)
chr1 (49-92)||(49936830-49936873)
chr1 (1-47)||(18057565-18057611)
chr1 (1-47)||(35197442-35197488)
chr1 (61-94)||(180865-180898)
chr1 (42-91)||(1395166-1395215)
chr1 (1-46)||(16116637-16116682)
chr1 (49-94)||(18057809-18057854)
chr1 (49-94)||(23920970-23921015)
chr1 (1-54)||(32143607-32143660)
chr1 (248-285)||(52251539-52251576)
chr1 (63-99)||(11422584-11422620)
chr1 (38-90)||(46590748-46590800)
chr1 (256-308)||(48973856-48973908)
[»] chr8 (53 HSPs)
chr8 (1-93)||(23567595-23567687)
chr8 (1-91)||(27506708-27506798)
chr8 (1-94)||(15809792-15809885)
chr8 (1-94)||(35448562-35448655)
chr8 (213-308)||(38685910-38686005)
chr8 (1-91)||(1672883-1672973)
chr8 (1-94)||(34343403-34343496)
chr8 (252-308)||(38233388-38233444)
chr8 (1-84)||(28979291-28979374)
chr8 (1-94)||(186033-186126)
chr8 (1-94)||(17656770-17656863)
chr8 (1-98)||(23504489-23504585)
chr8 (1-94)||(45409404-45409498)
chr8 (1-98)||(10585855-10585952)
chr8 (38-99)||(23567480-23567541)
chr8 (32-97)||(32644043-32644107)
chr8 (38-94)||(15808884-15808940)
chr8 (38-94)||(17656617-17656673)
chr8 (34-94)||(23347706-23347766)
chr8 (1-94)||(18161441-18161538)
chr8 (50-97)||(18757329-18757376)
chr8 (44-94)||(17792887-17792937)
chr8 (38-99)||(8439177-8439238)
chr8 (1-73)||(1773110-1773182)
chr8 (38-94)||(10586050-10586106)
chr8 (38-90)||(21120195-21120247)
chr8 (38-94)||(34343248-34343304)
chr8 (38-92)||(185882-185936)
chr8 (1-57)||(24472917-24472973)
chr8 (245-308)||(10617096-10617159)
chr8 (39-94)||(35448233-35448288)
chr8 (140-175)||(38233290-38233325)
chr8 (9-94)||(204933-205016)
chr8 (9-94)||(319770-319853)
chr8 (1-71)||(17792714-17792784)
chr8 (38-91)||(18161290-18161344)
chr8 (49-94)||(4835517-4835562)
chr8 (38-94)||(5106724-5106778)
chr8 (256-308)||(7178872-7178924)
chr8 (38-98)||(21120313-21120373)
chr8 (45-93)||(24473240-24473288)
chr8 (49-93)||(39657708-39657752)
chr8 (49-92)||(15227160-15227203)
chr8 (49-92)||(23397443-23397486)
chr8 (49-92)||(34633214-34633257)
chr8 (247-286)||(43776414-43776453)
chr8 (50-92)||(35301630-35301672)
chr8 (51-92)||(1149916-1149957)
chr8 (49-90)||(1209786-1209827)
chr8 (49-94)||(15259854-15259899)
chr8 (38-75)||(28979448-28979485)
chr8 (39-95)||(5222918-5222974)
chr8 (38-94)||(23940985-23941041)
[»] scaffold0249 (2 HSPs)
scaffold0249 (1-94)||(23543-23636)
scaffold0249 (40-90)||(23726-23776)
[»] scaffold0664 (1 HSPs)
scaffold0664 (7-98)||(3112-3203)
[»] scaffold0102 (3 HSPs)
scaffold0102 (1-94)||(33769-33861)
scaffold0102 (38-94)||(33615-33671)
scaffold0102 (1-94)||(15575-15668)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-93)||(9510-9602)
[»] scaffold0129 (2 HSPs)
scaffold0129 (40-94)||(20111-20165)
scaffold0129 (1-57)||(19956-20012)
[»] scaffold0126 (1 HSPs)
scaffold0126 (38-99)||(37627-37688)
[»] scaffold0035 (1 HSPs)
scaffold0035 (6-91)||(75694-75779)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-94)||(80666-80759)
scaffold0031 (38-100)||(80856-80918)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-94)||(72654-72747)
[»] scaffold0009 (1 HSPs)
scaffold0009 (42-90)||(51908-51956)
[»] scaffold0004 (2 HSPs)
scaffold0004 (38-91)||(96001-96054)
scaffold0004 (1-62)||(96151-96212)
[»] scaffold0777 (1 HSPs)
scaffold0777 (243-285)||(1073-1115)
[»] scaffold0117 (1 HSPs)
scaffold0117 (32-94)||(17856-17917)
[»] scaffold0571 (1 HSPs)
scaffold0571 (49-92)||(546-589)
[»] scaffold0074 (1 HSPs)
scaffold0074 (49-92)||(24404-24447)
[»] scaffold0338 (1 HSPs)
scaffold0338 (49-91)||(6513-6555)


Alignment Details
Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 18922072 - 18922168
Alignment:
Q  212 accttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18922072 accttgtaattattgatgtaatactgtgttgactttggtgtttcttccttagcacacctagtgctaggaaggccaatgttgtgttaatatatttcat 18922168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 30739457 - 30739363
Alignment:
Q  214 cttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30739457 cttgtaattattgatgtaatactgtgttgagtttgatgtttcttccttagcacacctagtggtaggaaggccaatgttgtgttaatatatttcat 30739363  T

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Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53865195 - 53865293
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||| |||||||| ||||||| || || | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  53865195 ttaagtatatctaatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccca 53865293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8165854 - 8165761
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||| |||||||||| |||||||||| || | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  8165854 ttaagcacatctaatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 8165761  T

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Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41025154 - 41025053
Alignment:
Q  1 ttaagtacatctaatga-ttttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||||||||||| |||| ||||| || |||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  41025154 ttaagtacatctaatgagttttagaatacaacttacagaaaccatttctgaatttatgcagggtgcataaggatttcattatgtaccataaccgcgccca 41025055  T
Q  100 ct 101  Q
    ||    
T  41025054 ct 41025053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 54895535 - 54895626
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||||||||| ||||| |||| || | ||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  54895535 ttaagtacatctaatggttttgaaatacaactcacagaaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataacc 54895626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17109811 - 17109718
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||| || | ||||||| |||||||||||||||| | ||| |||||||||||| |||||||||||||||||    
T  17109811 ttaagtacatctaatggttttggaatacaactcacagaaatcatttctggatttatgcaaggtacataaggatttccttatgcaccataaccgc 17109718  T

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Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 36309571 - 36309666
Alignment:
Q  3 aagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||| ||||| | || || | ||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||||||    
T  36309571 aagtacatctaatggttttgaagtacaactcacagaaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataaccgcgccc 36309666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12722830 - 12722736
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg-gagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||| |||||||| ||||||| || || | ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  12722830 ttaagtatatctaatggttttggagtacaactcacagaaaccatttctggatttatgcaagggtgcataaggatttccttatgcaccataaccgc 12722736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2124436 - 2124339
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||| | || || | ||| ||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  2124436 ttaagtacatctaatggttttgaagtacaactcacataaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 2124339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31763021 - 31762927
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcg 95  Q
    ||||||| |||||||| ||||||| || || | ||| |||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||||    
T  31763021 ttaagtatatctaatggttttggagtacaactcacaaaaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgcg 31762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 25715723 - 25715638
Alignment:
Q  13 aatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||| ||||| |||| || | ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  25715723 aatggttttgaaatacaactcacagaaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataaccacgccc 25715638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33883386 - 33883293
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||  ||||||| || || | ||| |||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||    
T  33883386 ttaagtacatctaatagttttggagtacaactcacaaaaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgc 33883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38010662 - 38010754
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||||||||||| ||||||| || || | ||| |||| ||||||| ||||||| ||||||||||||||||||  |||||||||||||||    
T  38010662 ttaagtacatctaatggttttggagtacaactcacataaactatttctgaatttatgcagggtgcataaggatttccgtatgcaccataaccg 38010754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38563897 - 38563801
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    |||||||||||||||| ||||||| || || | ||| ||||||||| |||||||||| ||| || ||||||||||| |||||||| |||||||||||    
T  38563897 ttaagtacatctaatggttttggagtacaactcacacaaaccatttatggatttatgcaggatgtataaggatttccttatgcactataaccgcgcc 38563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51076989 - 51076901
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccata 89  Q
    |||| ||||||||||||||||||| || |||| ||  ||||||||| | |||||||| |||||||||||||||||| ||||||||||||    
T  51076989 ttaaatacatctaatgattttggagtacaattcactaaaaccatttatagatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6841913 - 6841820
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||  ||||||| || || | ||| |||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  6841913 ttaaatacatctaattgttttggagtacaactcacataaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 6841820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 21995725 - 21995664
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  21995725 aaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 21995664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 53526404 - 53526497
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||||||| || || | | |||||||||||| | ||||||| ||||| |||||| ||||| |||||||||||||||||    
T  53526404 ttaaatacatctaatgattttggagtacaactcatagaaaccatttcggaatttatgcagggtacataagaatttccttatgcaccataaccgc 53526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 1492727 - 1492671
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  1492727 aaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 1492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 2124534 - 2124590
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  2124534 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 2124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 12722927 - 12722983
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  12722927 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 12722983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 25715716 - 25715772
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  25715716 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 25715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 30779434 - 30779342
Alignment:
Q  2 taagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||| |||||||| ||||| | || || | ||||| ||||||| |||||||||| | |||||||||||||||| |||||||||||||||||    
T  30779434 taagtatatctaatggttttgaagtacaactcacagagaccatttatggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 30779342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 31763097 - 31763153
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  31763097 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 31763153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 37059762 - 37059706
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||||||||||||    
T  37059762 catttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgcgccc 37059706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 43374502 - 43374446
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  43374502 aaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgc 43374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 54895459 - 54895403
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  54895459 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 54895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 9967762 - 9967685
Alignment:
Q  12 taatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    ||||||||||||| ||||| | ||| |||||||||||| ||||||| |||||||||||||| ||| |||||||||||||    
T  9967762 taatgattttggagtaaaactcacaaaaaccatttctgaatttatgcagggtgcataagga-ttccttatgcaccataa 9967685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1492813 - 1492906
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | ||| ||||||||| || ||||||| | ||||||||||||  || |||||||||||||||||    
T  1492813 ttaagtacatctaatggttttggagtataactcacaaaaaccatttttgaatttatgcatggtgcataaggaaatccttatgcaccataaccgc 1492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 562830 - 562774
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||    
T  562830 aaaccatttctgaatttatgcagggtgcatagggatttccttatgcaccataaccgc 562774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 36309467 - 36309419
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  36309467 catttctggatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 36924296 - 36924240
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  36924296 aaactatttttggatttatgcagggtgcataaggatttccttatgcaccataaccgc 36924240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 43375474 - 43375566
Alignment:
Q  2 taagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||| |||| || || || | | | ||| |||||||| ||||||| ||||||||||||||||||  ||||||||||||||||    
T  43375474 taagtacatctaatggttttagagtacaactcaaaaaaatcatttctgaatttatgcagggtgcataaggatttccgtatgcaccataaccgc 43375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8157202 - 8157108
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgc 96  Q
    |||||||||||||||||||||||| || || | ||| ||| |||||||||||||||  |  ||||||| | ||||| |||||||||||||||||||    
T  8157202 ttaagtacatctaatgattttggagtacaactcacataaatcatttctggatttattca-agtgcataggaatttccttatgcaccataaccgcgc 8157108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 33819734 - 33819687
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgcc 33819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 17109917 - 17109963
Alignment:
Q  48 tggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  17109917 tggatttatgcagggtgcataaggatttccttatgcaccataaccgc 17109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 8157282 - 8157331
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  8157282 catttctagatttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 33883472 - 33883525
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||    
T  33883472 aaaccatttttggatttatgcagggtgcataatgatttccttatgcaccataac 33883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9813037 - 9812965
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggat 73  Q
    ||||||||||||||||||||| || || || | |||||||| |||||||| |||||| | |||||||||||||    
T  9813037 ttaagtacatctaatgattttagagtacaactcacagaaactatttctgggtttatgcatggtgcataaggat 9812965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 9813138 - 9813190
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| ||||||| ||||||||||| |||||| |||||||||||||||||    
T  9813138 catttctgaatttatgcagggtgcataaagatttccttatgcaccataaccgc 9813190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 16475009 - 16475065
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| |||||||||| ||| ||||||| |||||| |||||||||||||||||    
T  16475009 aaaccatttatggatttatgcaggatgcataaagatttccttatgcaccataaccgc 16475065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 30739533 - 30739497
Alignment:
Q  137 gaatagtcctttcactttattaggcataggttaaact 173  Q
    |||||||||||||||||||||||||||||||||||||    
T  30739533 gaatagtcctttcactttattaggcataggttaaact 30739497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 18922000 - 18922035
Alignment:
Q  140 tagtcctttcactttattaggcataggttaaactcc 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  18922000 tagtcctttcactttattaggcataggttaaactcc 18922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 562931 - 562985
Alignment:
Q  34 acagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccat 88  Q
    ||||||||||||||| |||||||| ||||| |||||||||||| ||||| |||||    
T  562931 acagaaaccatttctagatttatgcagggttcataaggatttccttatgtaccat 562985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 22180250 - 22180200
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||| ||||    
T  22180250 ggatttatgcacggtgcataaggatttccttatgcaccataaccgctccca 22180200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36924393 - 36924489
Alignment:
Q  1 ttaagtacatctaatgattt---tggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||   | || || |||| ||| ||||||||| |||||||||| ||| | ||||| |||||| |||||||||||||||||    
T  36924393 ttaagtacatctaatggtttaattagagtacaattcacaaaaaccatttatggatttatgcaggatacataaagatttccttatgcaccataaccgc 36924489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 55660435 - 55660485
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| ||||||| | ||||||||| ||||||||||||||||||||||    
T  55660435 catttctgaatttatgcaaggtgcataaagatttctttatgcaccataacc 55660485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 6806530 - 6806469
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||| ||||||| ||| |  |||||||||||||||||||||| |||||| ||||    
T  6806530 aaaccatttctgaatttatgcaggatatataaggatttctttatgcaccacaaccgcaccca 6806469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 45256895 - 45256940
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  45256895 ggatttatgcacggtgcataaggatttccttatgcaccataaccgc 45256940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 45637625 - 45637662
Alignment:
Q  248 ggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  45637625 ggtgtttcttccttagcacaccttgtgctaggaaggcc 45637662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47568037 - 47568102
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgca 66  Q
    |||||||||||||||||||||||| || || | ||| |||||||||||| ||||||| | ||||||    
T  47568037 ttaagtacatctaatgattttggagtataactcacaaaaaccatttctgaatttatgcatggtgca 47568102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 53526306 - 53526253
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||||||||||||||||| |  ||||||||||||||  ||||||||||||||    
T  53526306 aaaccatttctggatttatgcaaagtgcataaggattttcttatgcaccataac 53526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 10374094 - 10374046
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| ||||||||||| |||||| |||| ||||||||    
T  10374094 catttctggatttatgcagggtgcataaagatttccttatacaccataa 10374046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 10473650 - 10473698
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||| | |||||||||||||||| ||||||||||||||||| ||||    
T  10473650 atttatgcacggtgcataaggatttccttatgcaccataaccgctccca 10473698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27872912 - 27872856
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg 57  Q
    |||||||||||||||  ||||| |||| || | ||||||||||||||||||||||||    
T  27872912 ttaagtacatctaatagttttgaaatacaactcacagaaaccatttctggatttatg 27872856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 37059904 - 37059956
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||| ||||||| |||||||||||||||||  ||||| |||||||    
T  37059904 aaaccatttctgaatttatgcagggtgcataaggattttcttatgtaccataa 37059956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 38563950 - 38564006
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| || ||| ||| ||| ||||||||||||| ||||||||||||||||||    
T  38563950 aaaccatttatgaattcatgcaggatgcataaggatttttttatgcaccataaccgc 38564006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 47567951 - 47567895
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||| | |||||||||||||||  |||| ||||||||||||    
T  47567951 aaactatttctggatttatgcaaggtgcataaggattttcttattcaccataaccgc 47567895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 53865119 - 53865063
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| || |||||||| |||||| ||||||| |||||||||    
T  53865119 aaaccatttctagatttatgcagagtgcataaagatttccttatgcatcataaccgc 53865063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4169042 - 4169089
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttct 48  Q
    |||||||||||||||||||||||| || || | |||||||||||||||    
T  4169042 ttaagtacatctaatgattttggagtacaactcacagaaaccatttct 4169089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 11786104 - 11786147
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  11786104 ggatttatgcacggtgcataaggatttccttatgcaccataacc 11786147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 11798271 - 11798314
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  11798271 ggatttatgcacggtgcataaggatttccttatgcaccataacc 11798314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 13635661 - 13635618
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  13635661 ggatttatgcacggtgcataaggatttccttatgcaccataacc 13635618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 15051072 - 15051029
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  15051072 ggatttatgcacggtgcataaggatttccttatgcaccataacc 15051029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 26577303 - 26577260
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||| | |||||||||||||||| |||||||||||||||||    
T  26577303 atttatgcacggtgcataaggatttccttatgcaccataaccgc 26577260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 30358837 - 30358880
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  30358837 ggatttatgcacggtgcataaggatttccttatgcaccataacc 30358880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 30597829 - 30597872
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  30597829 ggatttatgcacggtgcataaggatttccttatgcaccataacc 30597872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 42788664 - 42788715
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccata 89  Q
    |||| |||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  42788664 aaactatttcttgatttatgcaggatgcataaggatttccttatgcaccata 42788715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 49425993 - 49425950
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  49425993 ggatttatgcacggtgcataaggatttccttatgcaccataacc 49425950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 50644670 - 50644713
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  50644670 ggatttatgcacggtgcataaggatttccttatgcaccataacc 50644713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10374196 - 10374238
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaacca 43  Q
    ||||||||||||||||||||||||||| || | ||||||||||    
T  10374196 ttaagtacatctaatgattttggaatacaactcacagaaacca 10374238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 48341147 - 48341113
Alignment:
Q  249 gtgtttcttccttagcacacctagtgctaggaagg 283  Q
    |||||||||||||||||||||| ||||||||||||    
T  48341147 gtgtttcttccttagcacaccttgtgctaggaagg 48341113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 49492448 - 49492406
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    
T  49492448 ggatttatgcacggtgcataaggatttccttatgcaccataac 49492406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 638994 - 639035
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    ||||||||| | |||||||||||||||| |||||||||||||    
T  638994 ggatttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 8815548 - 8815585
Alignment:
Q  248 ggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  8815548 ggtgtttcttccttagcactccttgtgctaggaaggcc 8815585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 42527264 - 42527219
Alignment:
Q  240 ttgattttggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||    
T  42527264 ttgactttggtgtttcttccttgacacaccttgtgctaggaaggcc 42527219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 6806546 - 6806582
Alignment:
Q  36 agaaaccatttctggatttatggagggtgcataagga 72  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  6806546 agaaaccatttctagatttatgtagggtgcataagga 6806582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 8166067 - 8166123
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| ||| |||||||||| ||| ||||||| || ||||||    
T  8166067 aaaccatttctgaatttatgcaggatgcataaggagttccttatgcatcaaaaccgc 8166123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 13608859 - 13608819
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    |||||||||||||| |||||||| || ||||||||||||||    
T  13608859 tttggtgtttcttctttagcacaacttgtgctaggaaggcc 13608819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 21098133 - 21098177
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| | |||||||||||||||| |||| ||||||||||||    
T  21098133 gatttatgcatggtgcataaggatttccttatacaccataaccgc 21098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 22495269 - 22495229
Alignment:
Q  242 gattttggtgtttcttccttagcacacctagtgctaggaag 282  Q
    ||||||||||||||||| |||||||| || |||||||||||    
T  22495269 gattttggtgtttcttctttagcacaacttgtgctaggaag 22495229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 33871283 - 33871323
Alignment:
Q  54 tatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| |||||||||||||||||| ||||||| |||||||||    
T  33871283 tatgcagggtgcataaggatttccttatgcatcataaccgc 33871323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42788566 - 42788510
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg 57  Q
    ||||||||||||||| |||||||| || || | ||| |||||||||||| |||||||    
T  42788566 ttaagtacatctaatcattttggagtataactcacataaaccatttctgaatttatg 42788510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 7465376 - 7465469
Alignment:
Q  215 ttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7465376 ttgtaattattgttgtaatactgtgttgattttagtgtttcttccttagcacacctagtgctaggaaggccaatgttgtgttaatatatttcat 7465469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 12564850 - 12564755
Alignment:
Q  213 ccttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  12564850 ccttgtaattattgatgtaatactgtgttgactttggtgtttcttccttagcacacctagtgctaggaagaccattgttgtgttaatatatttcat 12564755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 16143600 - 16143507
Alignment:
Q  215 ttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16143600 ttgtaattactgttgtaatactgtgttgactttggtgtttcttccttagcacacctagtgctaggaaggccaatgttatgttaatatatttcat 16143507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20134291 - 20134198
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  20134291 ttaagtacatctaatgattttggaatacaactcacagaaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgc 20134198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 15059586 - 15059679
Alignment:
Q  2 taagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataa-ggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||| |||||||||| || | |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  15059586 taagtacatctaatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataagggatttccttatgcaccataaccgc 15059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22830740 - 22830837
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||    
T  22830740 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctggatttatgcagtgtgcataaggatttccttatgcaccataactgcgccc 22830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35662185 - 35662282
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | ||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  35662185 ttaagtacatctaatggttttggagtacaactcacagaaaccatttatggatttatgcagggtgcataagtatttccttatgcaccataaccgcgccc 35662282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11660885 - 11660792
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | ||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  11660885 ttaagtacatctaatggttttggagtacaactcacaaaaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccataaccgc 11660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 22695496 - 22695585
Alignment:
Q  5 gtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| |||||||||| || | |||||||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  22695496 gtacatctaatggttttggaatacaactcacagaaactatttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 22695585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 39861671 - 39861579
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||||||||||| ||||| |||| || | || ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  39861671 ttaagtacatctaatggttttgaaatacaactcaccgaaaccatttctggatttatgcagggtgcataaggatttccttatgccccataaccg 39861579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5630223 - 5630312
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| ||||||| || || | |||||||| ||||||||||||||| |||||||||||||||||| | |||||||||||    
T  5630223 ttaagtacatctaatggttttggagtacaactcacagaaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 5630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16552339 - 16552246
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||| ||||||||| ||||||| || || | |||||||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||    
T  16552339 ttaagtgcatctaatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcatacggatttccttatgcaccataaccgc 16552246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7286906 - 7287001
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    |||||||||||||||| ||||| | || || | |||||||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  7286906 ttaagtacatctaatggttttgaagtacaactcacagaaaccatttccggatttatgcagggtgcataagga-ttccttatgcaccataaccgcgcc 7287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 703822 - 703732
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||||||||||||||||||||| || || | ||| |||||||||||  ||||||| ||| |||||||||||||| ||||||||||||||    
T  703822 ttaagtacatctaatgattttggagtacaactcacaaaaaccatttctaaatttatgcaggatgcataaggatttccttatgcaccataac 703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36864220 - 36864317
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||| |||||||||||||||| || || | ||| ||| |||||||| ||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  36864220 ttaagtatatctaatgattttggagtacaactcacataaatcatttctgaatttatgcagagtgcataaggatttccttatacaccataaccgcgccc 36864317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 35662122 - 35662066
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  35662122 aaaccatttctggatttatgtagggtgcataaggatttccttatgcaccataaccgc 35662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 39861769 - 39861825
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  39861769 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 39861825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 11660971 - 11661026
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  11660971 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccg 11661026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25671240 - 25671331
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||| |||||||  |||||||||| |||| | |||||||||||||| ||||||| | ||| |||||||||||| |||||||||||||||    
T  25671240 ttaagtagatctaatagttttggaatacaattcatagaaaccatttctgaatttatgcatggtacataaggatttccttatgcaccataacc 25671331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3340731 - 3340824
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | ||||||||||||| |||||||||  |  ||||||||||||||| ||| |||||||||||||    
T  3340731 ttaagtacatctaatggttttggagtataactcacagaaaccatttatggatttatacatagtgcataaggatttccttacgcaccataaccgc 3340824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 20134388 - 20134444
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  20134388 aaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgc 20134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22671949 - 22672041
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||||||| ||| ||||||| || || | | | ||| |||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  22671949 ttaagtacatctgatggttttggagtacaactcataaaaatcatttctggatttatgcaggatgcataaggatttccttatgcaccataaccg 22672041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 39166243 - 39166152
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||| ||||||||||| ||||||| || |  | ||||||| |||||||||||||||| |||||||||||| ||||| ||||||||| |||||    
T  39166243 ttaattacatctaatggttttggagtacagctcacagaaatcatttctggatttatgcagggtgcataagaatttccttatgcaccgtaacc 39166152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 23155580 - 23155526
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  23155580 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataacc 23155526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 3340645 - 3340584
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||  ||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  3340645 aaaccatttctaaatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 3340584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 39086572 - 39086511
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||| ||||    
T  39086572 aaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgcaccca 39086511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 36864122 - 36864058
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcccactc 102  Q
    ||||||||||| |||||||| || ||||||||| ||||| ||||||||||||||||| |||||||    
T  36864122 aaaccatttctagatttatgcagtgtgcataagaatttccttatgcaccataaccgcacccactc 36864058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 42746574 - 42746518
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||    
T  42746574 aaaccatttctggatttatgcaggattcataaggatttccttatgcaccataaccgc 42746518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 20696319 - 20696378
Alignment:
Q  41 ccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcccac 100  Q
    |||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| |||||    
T  20696319 ccatttatggatttatgcagggtgaataaggatttccttatgcaccataaccgcacccac 20696378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 23155799 - 23155885
Alignment:
Q  5 gtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||| |||| ||||||| || || | | |||||| |||| |||||||||| | |||||||||||||||| ||||||||||||||    
T  23155799 gtacatcgaatggttttggagtacaactcatagaaacaatttttggatttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39086658 - 39086748
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||||||| ||||| ||||||| || |  | ||||||||||||||| |||||||  |  ||||||||||||||| ||||||||||||||    
T  39086658 ttaagtacatataatggttttggagtacagctcacagaaaccatttctagatttatacatagtgcataaggatttccttatgcaccataac 39086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 5411749 - 5411801
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| ||||||| |||||||||||| ||||| |||||||||||||||||    
T  5411749 catttctgaatttatgaagggtgcataagaatttccttatgcaccataaccgc 5411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 15559100 - 15559048
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| ||||||| | |||||||||||||||| |||||||||||||||||    
T  15559100 catttctgaatttatgcatggtgcataaggatttccttatgcaccataaccgc 15559048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20696220 - 20696123
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggat----ttctttatgcaccataaccgc 94  Q
    |||| ||||||||||  ||||| | || || | |||||||||||||||||||||||| ||||| |||||||||    ||| |||||||||||||||||    
T  20696220 ttaaatacatctaattgttttgaagtacaactcacagaaaccatttctggatttatgtagggtacataaggatttccttccttatgcaccataaccgc 20696123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33857446 - 33857374
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggat 73  Q
    ||||||| |||||||| ||||||| || || | ||| ||||||||| |||||||||| |||||||||||||||    
T  33857446 ttaagtaaatctaatggttttggagtacaactcacataaaccatttttggatttatgaagggtgcataaggat 33857374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 39166329 - 39166385
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||  ||||||| |||||||||||||||||  |||||||||||||||||    
T  39166329 aaaccatttctaaatttatgcagggtgcataaggattttcttatgcaccataaccgc 39166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 7465311 - 7465346
Alignment:
Q  140 tagtcctttcactttattaggcataggttaaactcc 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  7465311 tagtcctttcactttattaggcataggttaaactcc 7465346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11376473 - 11376402
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagga 72  Q
    |||||||||||||||||||||| | || || | |||||||||||||||  ||||||| ||| ||||||||||    
T  11376473 ttaagtacatctaatgattttgaagtacaactcacagaaaccatttctaaatttatgcaggatgcataagga 11376402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13363550 - 13363596
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||    
T  13363550 ttaagtacatctaatgattttggagtacaattcacagaaaccatttc 13363596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 42746832 - 42746890
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgc 96  Q
    |||||||||||| ||||||| ||||||||||| |||||| |||| || |||||||||||    
T  42746832 aaaccatttctgaatttatgcagggtgcataaagatttccttatacatcataaccgcgc 42746890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 15559097 - 15559182
Alignment:
Q  13 aatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||| |||| ||   ||| ||| ||||||| |||||||| ||| |||||| ||||||| |||||||||||||| ||||||    
T  15559097 aatgattttgaaatacaacccacataaatcatttctagatttatgcaggatgcatacggatttccttatgcaccataacagcgccc 15559182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 18908476 - 18908439
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaag 282  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18908476 tttggtgtttcttccttagcacacctaatgctaggaag 18908439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 7286804 - 7286752
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| ||||||| ||||||||||| |||||| |||| ||||||||||||    
T  7286804 catttctgaatttatgcagggtgcataaagatttccttatacaccataaccgc 7286752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29947655 - 29947750
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    |||||||||||||||  |||| || || || | ||| |||||||||||  ||||||| ||| | | |||||||||||||||||||||||||| ||||    
T  29947655 ttaagtacatctaatagtttttgagtataactcacaaaaaccatttctaaatttatgcaggat-cgtaaggatttctttatgcaccataaccacgcc 29947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 3883971 - 3883928
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  3883971 ggatttatgcacggtgcataaggatttccttatgcaccataacc 3883928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 8488242 - 8488285
Alignment:
Q  243 attttggtgtttcttccttagcacacctagtgctaggaaggcca 286  Q
    |||||||||||||||| |||||||| || |||||||||||||||    
T  8488242 attttggtgtttcttctttagcacaacttgtgctaggaaggcca 8488285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 14394598 - 14394641
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  14394598 ggatttatgcacggtgcataaggatttccttatgcaccataacc 14394641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 14940292 - 14940249
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  14940292 ggatttatgcacggtgcataaggatttccttatgcaccataacc 14940249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25016658 - 25016611
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttct 48  Q
    |||||||||||||||||||||||| || || | |||||||||||||||    
T  25016658 ttaagtacatctaatgattttggagtagaactcacagaaaccatttct 25016611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 26637773 - 26637730
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  26637773 ggatttatgcacggtgcataaggatttccttatgcaccataacc 26637730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 37456810 - 37456853
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  37456810 ggatttatgcatggtgcataaggatttccttatgcaccataacc 37456853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 42289302 - 42289337
Alignment:
Q  247 tggtgtttcttccttagcacacctagtgctaggaag 282  Q
    |||||||||||||||||||||||| |||||||||||    
T  42289302 tggtgtttcttccttagcacaccttgtgctaggaag 42289337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25016525 - 25016479
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || || | ||||||||||||||    
T  25016525 ttaagtacatctaatgattttggagtataactcacagaaaccatttc 25016479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 32247073 - 32247111
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaagg 283  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  32247073 tttggtgtttcttccttcgcacacctagtgctaagaagg 32247111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35915871 - 35915917
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || || | ||||||||||||||    
T  35915871 ttaagtacatctaatgattttggagtacaactcacagaaaccatttc 35915917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 11376574 - 11376630
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||| ||||||| || ||||||||||| ||| |||||||||||||| |||||||    
T  11376574 catttctgaatttatgcagtgtgcataagga-ttccttatgcaccataactgcgccca 11376630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 13363794 - 13363839
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| || ||||||||||||||    
T  13363794 ggatttatgcacggtgcataaggatttccttgtgcaccataaccgc 13363839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 25545584 - 25545617
Alignment:
Q  61 ggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||||||||||    
T  25545584 ggtgcataaggatttccttatgcaccataaccgc 25545617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 16518287 - 16518255
Alignment:
Q  243 attttggtgtttcttccttagcacacctagtgc 275  Q
    |||||||||||||||||||||||||||| ||||    
T  16518287 attttggtgtttcttccttagcacaccttgtgc 16518255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 21042154 - 21042206
Alignment:
Q  256 ttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||| |||||||| ||||||||||||||   | ||||||||||||||||||    
T  21042154 ttcctttgcacaccttgtgctaggaaggccttaggtgtgttaatatatttcat 21042206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 25942518 - 25942474
Alignment:
Q  242 gattttggtgtttcttccttagcacacctagtgctaggaaggcca 286  Q
    |||||||||||| |||| |||||||| || |||||||||||||||    
T  25942518 gattttggtgttacttctttagcacaacttgtgctaggaaggcca 25942474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 30783586 - 30783630
Alignment:
Q  48 tggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||| | |||||||||||||||| ||||||| |||||||    
T  30783586 tggatttatgcacggtgcataaggatttccttatgcatcataacc 30783630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 285
Target Start/End: Original strand, 34177906 - 34177938
Alignment:
Q  253 ttcttccttagcacacctagtgctaggaaggcc 285  Q
    |||||||||||||||||| ||||||||||||||    
T  34177906 ttcttccttagcacaccttgtgctaggaaggcc 34177938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 1997636 - 1997540
Alignment:
Q  212 accttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    ||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1997636 accttgtaattattgatgtaataccgtgttgacattggtgtttcttccttagcacacctagtgctaggaaggccaaagttgtgttaatatatttcat 1997540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30777387 - 30777290
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  30777387 ttaagtacatctaatggttttggagtacaactcacataaaccatttctggatttatgcagggtgcataaggatttttttatgcaccataaccgcgccc 30777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42364645 - 42364742
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  42364645 ttaagtacatctaatggttttggagtacaactaacagaaaccatttctggatttatgcagggtgcataaggatttccttttgcaccataaccgcgccc 42364742  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20661488 - 20661395
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||| || | ||| ||||||||| | |||||||| |||||||||||||||||| |||||||||||||||||    
T  20661488 ttaagtacatctaatggttttggaatacaactcacaaaaaccatttatagatttatgcagggtgcataaggatttccttatgcaccataaccgc 20661395  T

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Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22596396 - 22596303
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||| | || |||| |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  22596396 ttaagtacatctaatggttttgtagtacaattcacagaaaccaattctggatttatgcagggtgcataaggatttccttatacaccataaccgc 22596303  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12449146 - 12449053
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | ||| |||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||    
T  12449146 ttaagtacatctaatggttttggagtacaactcacaaaaaccatttctgaatttatgcagtgtgcataaggatttccttatgcaccataaccgc 12449053  T

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Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25575415 - 25575322
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||| ||||| || | ||| |||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||||    
T  25575415 ttaagtacatctaatggttttagaatataactcacaaaaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgc 25575322  T

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Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37867307 - 37867404
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||| |||||||  ||||||| || || | |||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  37867307 ttaagtatatctaatagttttggagtataactcacagaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccgtaaccgcgccc 37867404  T

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Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 40426833 - 40426770
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  40426833 tttggtgtttcttccttagcacacctagtgttaggaaggccattgttgtgttaatatatttcat 40426770  T

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Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16111656 - 16111754
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccattt-ctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||| ||||| ||||||| || || | ||| ||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  16111656 ttaagtacatttaatggttttggagtacaactcacaaaaaccattttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 16111754  T

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Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22588410 - 22588317
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||||||| || || | ||| |||||||||||| ||||||| ||||||||||||||  || |||||||||||||||||    
T  22588410 ttaaatacatctaatgattttggagtacaactcacaaaaaccatttctgaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 22588317  T

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Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 31783848 - 31783787
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  31783848 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 31783787  T

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Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 34726692 - 34726605
Alignment:
Q  5 gtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||||| ||||| | || || | | ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  34726692 gtacatctaatggttttgaagtacaactcatagaaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19246814 - 19246907
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||||||| || || | ||| ||| |||||||| ||||||| |||||| |||||||  || |||||||||||||||||    
T  19246814 ttaagtacatctaatgattttggagtataactcacataaatcatttctgaatttatgtagggtgtataaggaaatccttatgcaccataaccgc 19246907  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 31711565 - 31711504
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||    
T  31711565 aaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgcaccca 31711504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31711651 - 31711742
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||| ||||||||||| ||||||| || || | ||| |||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||    
T  31711651 ttaaatacatctaatggttttggagtacaactcacaaaaaccatttctgaatttatgcagggtgcatgaggatttc-ttatgcaccataaccg 31711742  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 20661584 - 20661639
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  20661584 aaaccatttctggatttatgcagggtgcataatgatttccttatgcaccataaccg 20661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31783934 - 31784030
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtg---cataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||  | || || | |||||||||||||||| ||||||| ||||||   |||||||||||| |||||||||||||||||    
T  31783934 ttaagtacatctaatggttttttagtacaactcacagaaaccatttctgaatttatgcagggtggtgcataaggatttccttatgcaccataaccgc 31784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 22596493 - 22596554
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||    
T  22596493 aaacaatttctggatttatgcagggtacataaggatttccttatgcaccataaccgcaccca 22596554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 34726789 - 34726846
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||    
T  34726789 catttctggatttatgcagggtgcataagaatttccttatgcaccataaccgcaccca 34726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 15252894 - 15252834
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| |||  |||||||    
T  15252894 aaaccatttctggatttatgcagggtgcataaggatttccttatgcactatagtcgcgccc 15252834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 15253009 - 15253065
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||    
T  15253009 aaaccatttctgaatttatgcagggtgcataaggatttcgttatacaccataaccgc 15253065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 20194016 - 20194072
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||    
T  20194016 aaaccatttctagatttatgtagggtgcataagaatttccttatgcaccataaccgc 20194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 42364547 - 42364491
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||    
T  42364547 aaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgc 42364491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 44915480 - 44915536
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  44915480 aaacaatttctggatttatgcagggtgcataagcatttccttatgcaccataaccgc 44915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 1997711 - 1997673
Alignment:
Q  137 gaatagtcctttcactttattaggcataggttaaactcc 175  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1997711 gaatagtcctttcactttattaggcataggttaaactcc 1997673  T

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Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 19246717 - 19246664
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||| ||||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  19246717 aaacaatttctgaatttatgcagggtgcataaggatttccttatgcaccataac 19246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 37867205 - 37867148
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||| ||||||| |||||| ||||||||||| ||||||||||||||||| ||||    
T  37867205 catttctgaatttatgcagggtggataaggatttccttatgcaccataaccgcaccca 37867148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 44915383 - 44915290
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| ||||| ||||||| || || | ||| ||| |||||||  ||||||| ||| ||||||| |||||| |||||||||||||||||    
T  44915383 ttaagtacatttaatggttttggagtacaactcacataaatcatttctaaatttatgcaggctgcataaagatttccttatgcaccataaccgc 44915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 15150276 - 15150336
Alignment:
Q  34 acagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||  |||||||||||||||||    
T  15150276 acagaaaccttttctgaatttatgcaggatgcataaggattttcttatgcaccataaccgc 15150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 24183487 - 24183431
Alignment:
Q  3 aagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatgga 59  Q
    |||||||||||||| |||||||||| || | ||| ||||||||||||||||||||||    
T  24183487 aagtacatctaatggttttggaatacaactcacataaaccatttctggatttatgga 24183431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 24183590 - 24183642
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  24183590 cattcctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 24183642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35126585 - 35126513
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggat 73  Q
    |||||||||||||||||||||| |||| || | ||| |||||||||||  ||| ||| |||||||||||||||    
T  35126585 ttaagtacatctaatgattttgaaatacaactcacataaaccatttctaaattaatgcagggtgcataaggat 35126513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 22588507 - 22588560
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||| ||||||||||||||| |||||||||||||||||| ||| ||| ||||||    
T  22588507 aaactatttctggatttatgtagggtgcataaggatttccttacgcatcataac 22588560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 12449232 - 12449288
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||  ||||||| | ||||||||| |||||| |||||||||||||||||    
T  12449232 aaaccatttctaaatttatgcaaggtgcataaagatttccttatgcaccataaccgc 12449288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 25193991 - 25194035
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  25193991 ggatttatgcacggtgcataaggatttcattatgcaccataaccg 25194035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 39355165 - 39355217
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgcgcccact 101  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| | ||||||    
T  39355165 ggatttatgcacggtgcataaggatttccttatgcaccataaccactcccact 39355217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1095271 - 1095200
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagga 72  Q
    |||||||||||||||| ||||| |||| || | ||| ||| |||||||  ||||||| ||||||||||||||    
T  1095271 ttaagtacatctaatggttttgaaatacaactcacaaaaatcatttctaaatttatgcagggtgcataagga 1095200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 7487190 - 7487147
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  7487190 ggatttatgcacggtgcataaggatttccttatgcaccataacc 7487147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20570917 - 20571008
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||| ||||||| ||||| | || || ||||||||||||||| | |||||||| |||||||| |      || |||||||||||||||||||||    
T  20570917 ttaagtacgtctaatggttttgaagtacaacttacagaaaccatttttagatttatgcagggtgcaaa------tccttatgcaccataaccgcgccc 20571008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 29691291 - 29691355
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggcca--acgttgtgttaatatatttcat 308  Q
    ||||||||||||||||| |||||||| |||||||||||||||    |||| |||||||||||||||    
T  29691291 tttggtgtttcttcctt-gcacaccttgtgctaggaaggccatttggttgagttaatatatttcat 29691355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 1292113 - 1292072
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  1292113 atttatgcacggtgcataaggatttccttatgcaccataacc 1292072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 18297212 - 18297167
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | ||||||||||||||||  ||||||||||||||||    
T  18297212 ggatttatgcacggtgcataaggatttccctatgcaccataaccgc 18297167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 41345129 - 41345088
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  41345129 atttatgcacggtgcataaggatttccttatgcaccataacc 41345088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 23182214 - 23182270
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||| ||| |||||||||||| ||||| |||| ||||||||||||    
T  23182214 aaaccatttttagattaatgcagggtgcataagaatttccttattcaccataaccgc 23182270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23225982 - 23226038
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg 57  Q
    |||||||||||||||   ||||||||| || | |||||||||||||||| |||||||    
T  23225982 ttaagtacatctaatagctttggaatacaactcacagaaaccatttctgaatttatg 23226038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 23593471 - 23593527
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||| ||| |||||||||||| ||||| |||| ||||||||||||    
T  23593471 aaaccatttttagattaatgcagggtgcataagaatttccttattcaccataaccgc 23593527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 34464840 - 34464884
Alignment:
Q  48 tggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||    
T  34464840 tggatttatgcacggtgcataaggatttccttatggaccataacc 34464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 15117190 - 15117095
Alignment:
Q  213 ccttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15117190 ccttgtaattattgatataatactatgttgactttggtgtttcttccttagcacacctagtgctaggaaggccaatgttgtgttaatatatttcat 15117095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14237870 - 14237773
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||||||||||| || || | ||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  14237870 ttaagtacatctaatgattttggagtacaactcacataaacaatttctggatttatgtagggtgcataaggatttccttatgcaccataacctcgccc 14237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19281375 - 19281278
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || ||| ||||| |||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  19281375 ttaagtacatctaatggttttggagtacaacttatagaaagcatttctgaatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 19281278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21384881 - 21384788
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||| |||||||| |||||||||| || | |||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  21384881 ttaagtaaatctaatggttttggaatacaactcacagaaaccatttctggatttatgcaggatgcataagaatttccttatgcaccataaccgc 21384788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25119198 - 25119105
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||||||    
T  25119198 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataagaatttccttatgcaccataaccgc 25119105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10698668 - 10698570
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcccac 100  Q
    |||||||||||||||| ||||||| |  || | ||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  10698668 ttaagtacatctaatg-ttttggagtgcaactcacagaaaccatttcttgatttatgcagggtgcacaaggatttccttatgcaccataaccgcgcccac 10698570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22857580 - 22857487
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||| | || || | ||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  22857580 ttaagtacatctaatggttttgaagtacaactcacaaaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 22857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 25119459 - 25119520
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||    
T  25119459 aaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgcaccca 25119520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 21384978 - 21385034
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  21384978 aaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 21385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 22857666 - 22857722
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  22857666 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 22857722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 18672226 - 18672289
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    ||||||||||||| ||||||||||||| |||||||||| |||  ||||||||||||||||||||    
T  18672226 tttggtgtttcttgcttagcacacctaatgctaggaagaccattgttgtgttaatatatttcat 18672289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20522761 - 20522663
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||| ||||||||||| || |||| || || | | |||||||||||||| ||||||| |||||||||||  ||||| ||||||||||||||| ||||||    
T  20522761 ttaaatacatctaatggttctggagtacaactcaaagaaaccatttctgaatttatgcagggtgcataaatatttccttatgcaccataaccacgccca 20522663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 20522837 - 20522891
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  20522837 aaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccataacc 20522891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 19284426 - 19284370
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||| |||||||||||||||||| |||||||||||||||||    
T  19284426 aaaccatttttagatttatgcagggtgcataaggatttccttatgcaccataaccgc 19284370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 10588942 - 10589003
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||| |||| || ||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  10588942 aaactatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 10589003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 7371087 - 7371143
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||| | ||||||||||| |||||  |||||||||||||||||    
T  7371087 aaaccatttctggatttaagcagggtgcataaagattttcttatgcaccataaccgc 7371143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 2189582 - 2189543
Alignment:
Q  243 attttggtgtttcttccttagcacacctagtgctaggaag 282  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  2189582 attttggtgtttcttccttagcacaccttgtgctaggaag 2189543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 26713167 - 26713223
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||| ||||||  |||||||||||||||||| ||||||||||||||||| ||||    
T  26713167 catttctgaatttatatagggtgcataaggatttc-ttatgcaccataaccgcaccca 26713223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 6900933 - 6900976
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  6900933 ggatttatgcacggtgcataaggatttccttatgcaccataacc 6900976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 15493304 - 15493347
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  15493304 ggatttatgcacggtgcataaggatttccttatgcaccataacc 15493347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 34869999 - 34869956
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  34869999 ggatttatgcacggtgcataaggatttccttatgcaccataacc 34869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 129279 - 129210
Alignment:
Q  24 aataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||| | ||| |||| ||||||||||||||  |||||||||||  ||||| |||||||||||||||||    
T  129279 aataaaactcacataaactatttctggatttatatagggtgcataa-aatttccttatgcaccataaccgc 129210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 878390 - 878435
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | ||| |||||||||||| |||||||||||||||||    
T  878390 ggatttatgcacggtacataaggatttccttatgcaccataaccgc 878435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 7765406 - 7765447
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  7765406 atttatgcacggtgcataaggatttccttatgcaccataacc 7765447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 15034992 - 15035033
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||||| | |||||||||||||||| ||||||||||||||    
T  15034992 gatttatgcacggtgcataaggatttccttatgcaccataac 15035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 11140445 - 11140500
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| ||| |||||||||||||| |||| ||||| ||||||    
T  11140445 aaaccatttctgaatttatgtagg-tgcataaggatttccttatacaccaaaaccgc 11140500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 25066251 - 25066203
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||| |||||||||||| ||||| ||||  ||||||||||||||||    
T  25066251 atttatgcagggtgcataagaatttccttatataccataaccgcgccca 25066203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34227768 - 34227671
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  34227768 ttaagtacatctaatgtttttggaatacaattcacaaaaaccatttctggatttatgcaggttgcataaggatttccttatgcaccataaccgcgccc 34227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 44426751 - 44426848
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  44426751 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 44426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5728832 - 5728925
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||| |||||||||| || | |||||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||    
T  5728832 ttaaatacatctaatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataagaattttcttatgcaccataaccgc 5728925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46004433 - 46004336
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||||| |||||| ||||||| || || | |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||    
T  46004433 ttaagtacagctaatggttttggagtacaactcacagaaaccatttctggatttatgcagagtgcataaggatttcgttatgcaccataactgcgccc 46004336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6620750 - 6620847
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||| ||||||| || || | ||||||||||||| ||||| || | ||||| |||||||||||| ||||||||||||||||||||||    
T  6620750 ttaagtacatctaatggttttggagtacaactcacagaaaccatttgtggatgtacgcagggt-cataaggatttccttatgcaccataaccgcgccca 6620847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26945606 - 26945513
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||| |||||||||| || |  ||||||| |||||||||| |||| |||||||||||| ||||| |||||||||||||||||    
T  26945606 ttaaatacatctaatggttttggaatacaactcgcagaaacaatttctggatatatgcagggtgcataagaatttccttatgcaccataaccgc 26945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32604813 - 32604724
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||| ||||||| ||||||||||| |||||  |||||||||||||    
T  32604813 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataaagattttcttatgcaccataa 32604724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 38837628 - 38837543
Alignment:
Q  5 gtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||| ||||||| || || | |||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||    
T  38837628 gtacatctaatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataaggatttccgtatgcaccataa 38837543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 44426653 - 44426597
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44426653 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 44426597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41065860 - 41065761
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcccac 100  Q
    |||||||||| ||||| ||||||| || || | |||||||||||||||  ||||||| ||| ||||||| |||||  |||||||||||||||||||||||    
T  41065860 ttaagtacatttaatggttttggagtacaactcacagaaaccatttctaaatttatgcaggatgcataaagattttcttatgcaccataaccgcgcccac 41065761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 26945703 - 26945759
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26945703 aaactatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 26945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 46004524 - 46004580
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  46004524 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 46004580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7843611 - 7843518
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| ||||| ||||||| || || | ||| |||||||||||||||||||| || ||||||||||||||  |||  ||||||||||||    
T  7843611 ttaagtacatttaatggttttggagtacaactcacataaaccatttctggatttatgcagcgtgcataaggattttcttagacaccataaccgc 7843518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6846671 - 6846579
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||||| |||||||| ||||||| || || | |||||||||||||||| ||||||| |  |||||||||||  || ||||||||||||||||    
T  6846671 ttaagtaaatctaatggttttggagtacaactcacagaaaccatttctgaatttatgcaaagtgcataaggaaatccttatgcaccataaccg 6846579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 7843708 - 7843764
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||    
T  7843708 aaaccatttctgaatttatgcaggttgcataaggatttctttatacaccataaccgc 7843764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 38837718 - 38837774
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| |||||||||| | |||||||||||||||| |||||||||||||||||    
T  38837718 aaaccatttttggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 38837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 43742300 - 43742248
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  43742300 catttctggatttatgcaggatgcataaggatttccttatgcaccataaccgc 43742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 24904990 - 24904925
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggcca--acgttgtgttaatatatttcat 308  Q
    |||||||||||||||||||||||||| |||||||||||||||    |||| |||||||||||||||    
T  24904990 tttggtgtttcttccttagcacaccttgtgctaggaaggccatttggttgagttaatatatttcat 24904925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31365422 - 31365491
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataag 70  Q
    |||| ||||||||||| ||||||| || || | ||||||||||||| |||||||||| ||||||||||||    
T  31365422 ttaaatacatctaatggttttggagtacaactcacagaaaccatttatggatttatgcagggtgcataag 31365491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 45478466 - 45478563
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||| ||||  ||||| |||| || | ||| |||| ||| ||||||||||| | | |||||||||||||  |||||||||||||||||||||    
T  45478466 ttaagtacatataatagttttgcaatacaactcacaaaaacaattactggatttatgcaagatgcataaggattttcttatgcaccataaccgcgccc 45478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 5728680 - 5728624
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| | |||||||||||||||| | |||||| ||||||||    
T  5728680 aaaccatttctggatttatgcaaggtgcataaggatttcctcatgcactataaccgc 5728624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 6620674 - 6620618
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| |||||||||| |  ||||||||||||||| |||||||||||||||||    
T  6620674 aaaccatttatggatttatgcatagtgcataaggatttcgttatgcaccataaccgc 6620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 7845086 - 7845142
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||  ||||||| ||| |||||||||||||| |||||||||||||||||    
T  7845086 aaaccatttctaaatttatgcaggttgcataaggatttccttatgcaccataaccgc 7845142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 31365326 - 31365270
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| |||||||||| | | |||||||||||||| |||||||||||||||||    
T  31365326 aaaccatttatggatttatgcaagatgcataaggatttccttatgcaccataaccgc 31365270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 34227865 - 34227921
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| || ||||||| |||||||||||| ||||| |||||||||||||||||    
T  34227865 aaaccatttatgaatttatgcagggtgcataagaatttccttatgcaccataaccgc 34227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 41065958 - 41066014
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||  ||||||| ||||| |||||||||||| |||||||||||||||||    
T  41065958 aaaccatttctaaatttatgcagggtacataaggatttccttatgcaccataaccgc 41066014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 18667815 - 18667780
Alignment:
Q  98 cactccatacatgtcaaggttaagatgttggaatat 133  Q
    ||||||||||||||||||||||||||||||||||||    
T  18667815 cactccatacatgtcaaggttaagatgttggaatat 18667780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 15973904 - 15973859
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  15973904 ggatttatgcatggtgcataaggatttccttatgcaccataaccgc 15973859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 43026233 - 43026196
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaag 282  Q
    |||||||||||||||||||||||||| |||||||||||    
T  43026233 tttggtgtttcttccttagcacaccttgtgctaggaag 43026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 46572618 - 46572573
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  46572618 ggatttatgcatggtgcataaggatttccttatgcaccataaccgc 46572573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 924552 - 924496
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| | |||| |||| |||||| |||||||||||||||||    
T  924552 aaaccatttctgaatttatgcaaggtgtataaagatttccttatgcaccataaccgc 924496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 11732085 - 11732041
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| | |||||||||||||||| |||||||||||||||||    
T  11732085 gatttatgcacggtgcataaggatttccttatgcaccataaccgc 11732041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 48692050 - 48692094
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  48692050 ggatttatgcacggtgcataaggatttccttatgcaccataaccg 48692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 5728735 - 5728696
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttct 77  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  5728735 aaaccatttctgaatttatgcagggtgcataaggatttct 5728696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 30884158 - 30884115
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  30884158 ggatttatgcacggtgcataaggatttccttatgcaccataacc 30884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 35737078 - 35737121
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  35737078 ggatttatgcacggtgcataaggatttccttatgcaccataacc 35737121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 41911048 - 41911005
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  41911048 ggatttatgcacggtgcataaggatttccttatgcaccataacc 41911005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 46358650 - 46358693
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  46358650 ggatttatgcacggtgcataaggatttccttatgcaccataacc 46358693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 47340277 - 47340320
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  47340277 ggatttatgcacggtgcataaggatttccttatgcaccataacc 47340320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 48690941 - 48690902
Alignment:
Q  52 tttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  48690941 tttatgcacggtgcataaggatttctttatgcaccataac 48690902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 16933178 - 16933136
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  16933178 gatttatgcacggtgcataaggatttccttatgcaccataacc 16933136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 16938561 - 16938519
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  16938561 gatttatgcacggtgcataaggatttccttatgcaccataacc 16938519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 31660200 - 31660242
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  31660200 gatttatgcacggtgcataaggatttccttatgcaccataacc 31660242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 31192545 - 31192582
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggattt 75  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  31192545 aaaccatttctggatttatgcaggatgcataaggattt 31192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43742402 - 43742468
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataa 69  Q
    ||||||||||||||||||||||||  | || | ||||||||||||| |  ||||||| |||||||||||    
T  43742402 ttaagtacatctaatgattttgga--agaactcacagaaaccatttttaaatttatgcagggtgcataa 43742468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 48830601 - 48830642
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  48830601 atttatgcacggtgcataaggatttccttatgcaccataacc 48830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 9490773 - 9490733
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    |||| |||||||||||||||||||||| || ||||||||||    
T  9490773 tttgatgtttcttccttagcacacctaatgttaggaaggcc 9490733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 9628387 - 9628427
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    |||||||||||||| |||||||| || ||||||||||||||    
T  9628387 tttggtgtttcttctttagcacaacttgtgctaggaaggcc 9628427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 32685887 - 32685843
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| | |||| ||||||||||| |||||||||||||||||    
T  32685887 gatttatgcacggtgtataaggatttccttatgcaccataaccgc 32685843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 33798732 - 33798776
Alignment:
Q  48 tggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | | |||||||||||||||| |||||||||||||||    
T  33798732 tggatttacgtacggtgcataaggatttccttatgcaccataacc 33798776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1200 - 1293
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||||||| || || | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  1200 ttaaatacatctaatgattttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36185818 - 36185721
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  36185818 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctggatttatgcaggatgcataaggatttccttatgcaccataaccgcgccc 36185721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8036892 - 8036799
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||| | || || | ||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  8036892 ttaagtacatctaatggttttgaagtataactcacaaaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 8036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12974104 - 12974006
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||||| |||||||||| |  | || | |||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  12974104 ttaagtacatcgaatgattttgcagaacaactcacagaaacaatttctggatttaggcagggtgcataaggatttccttatgcaccataaccgcgccca 12974006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 50416528 - 50416614
Alignment:
Q  13 aatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||| ||||||| || |||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  50416528 aatggttttggagtacaattcacaaaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 50416614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 21175220 - 21175309
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| ||||||| || || | |||||||| ||||||||||||||| |||||||||||||||||| | |||||||||||    
T  21175220 ttaagtacatctaatggttttggagtacaactcacagaaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 21175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 47225805 - 47225898
Alignment:
Q  6 tacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||||| |||| || || || | |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| |||||||    
T  47225805 tacatctaatggttttagagtacaactcacagaaaccatttctggatttatgcagggtacataaggatttccttatgcaccataactgcgccca 47225898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47924257 - 47924157
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagg---atttctttatgcaccataaccgcgcc 97  Q
    |||||||||||||||| | ||| | || || | |||||||||||||||||||||||| |||||||||||||   ||||| ||||||||||||||||||||    
T  47924257 ttaagtacatctaatggtattgaagtacaactcacagaaaccatttctggatttatgcagggtgcataaggaatatttccttatgcaccataaccgcgcc 47924158  T
Q  98 c 98  Q
    |    
T  47924157 c 47924157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 19012526 - 19012607
Alignment:
Q  13 aatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||| || || | |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  19012526 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 19012607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 36185894 - 36185955
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  36185894 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcaccca 36185955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47729208 - 47729301
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||| |||| || || | || |||||||||||||||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  47729208 ttaaatacatctaatggtttttgagtacatttcacagaaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccaaaaccgc 47729301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 50416535 - 50416479
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  50416535 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 50416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49053317 - 49053219
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||  ||||| | || || | |||||||||||||||| |||||||  ||||||||||| ||||| |||||||||||||| |||||||    
T  49053317 ttaagtacatctaatagttttgaagtacaactcacagaaaccatttctgaatttatgccgggtgcataagaatttccttatgcaccataactgcgccca 49053219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 38345330 - 38345279
Alignment:
Q  43 atttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  38345330 atttctggatttatgcagggtgcataaagatttctttatgcaccataaccgc 38345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 8036978 - 8037034
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| |||||||||| |||||||||||||||||| | |||||||||||||||    
T  8036978 aaaccatttttggatttatgcagggtgcataaggatttcctcatgcaccataaccgc 8037034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30795001 - 30795096
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagg--atttctttatgcaccataaccgc 94  Q
    ||||||||| ||||||||||||||||| || | ||||||||||||| |  ||||||| |||||  ||||||  ||||| |||||||||||||||||    
T  30795001 ttaagtacaactaatgattttggaatacaactcacagaaaccatttttaaatttatgcagggtagataaggatatttccttatgcaccataaccgc 30795096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 16276714 - 16276663
Alignment:
Q  48 tggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  16276714 tggatttatgcacggtgcataaggatttctttatgcaccataaccgctccca 16276663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 27437912 - 27437833
Alignment:
Q  13 aatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||| |||||||||| || |||||||||||||||||| ||||||| | |||||||||  ||||| |||| ||||||||||    
T  27437912 aatggttttggaatacaacttacagaaaccatttctgaatttatgcatggtgcataaaaatttccttatacaccataacc 27437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 12974182 - 12974235
Alignment:
Q  40 accatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  12974182 accatttctggatttatgcagg-tgcataaggatttccttatgcaccataaccgc 12974235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 27446202 - 27446255
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||||||||| ||||||| | |||||||||||||||| ||||||||||||||    
T  27446202 aaaccatttctgaatttatgcaaggtgcataaggatttccttatgcaccataac 27446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 47225804 - 47225759
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  47225804 ggatttatgcagggtgcataaggatttgtttatgcaccataaccgc 47225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 47924359 - 47924408
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  47924359 catttcttgatttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 49053415 - 49053476
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||| ||||||||||||||| |||||| |||| |||||| ||||||||||||||||| ||||    
T  49053415 aaactatttctggatttatgcagggtggataaagatttccttatgcaccataaccgcaccca 49053476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 16653551 - 16653496
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  16653551 aaaccatttctggatttatgcagg-tgcataagaatttccttatgcaccataaccgc 16653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 19012446 - 19012391
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||    
T  19012446 aaaccatttctggatttatgcagg-tgcataagaatttccttatgcaccataaccgc 19012391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 3694635 - 3694596
Alignment:
Q  243 attttggtgtttcttccttagcacacctagtgctaggaag 282  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3694635 attttggtgtttcttccttagcacaccttgtgctaggaag 3694596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 30794904 - 30794857
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcac 85  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  30794904 aaaccatttctagatttatgcagggtgcataaggatttccttatgcac 30794857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38345432 - 38345503
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagga 72  Q
    |||||||||||||||| ||||||| || || | |||||||  ||||||||||||||| ||| ||||||||||    
T  38345432 ttaagtacatctaatggttttggagtacaactcacagaaattatttctggatttatgcaggatgcataagga 38345503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20127093 - 20127023
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagg 71  Q
    ||||||| ||||||||| ||| ||||| || | |||||||||||||||  ||||||| |||||||||||||    
T  20127093 ttaagtatatctaatgaatttagaatacaactcacagaaaccatttctaaatttatgcagggtgcataagg 20127023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 3857529 - 3857488
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggcca 286  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  3857529 tttgatgtttcttccttagcacacctagtgctacgaaggcca 3857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 8719137 - 8719182
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  8719137 ggatttatgcacggtgcataaggatttccttatgcaccataaccgc 8719182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 9071024 - 9071069
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  9071024 ggatttatgcacggtgcataaggatttccttatgcaccataaccgc 9071069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 3475343 - 3475300
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  3475343 ggatttatgcacggtgcataaggatttccttatgcaccataacc 3475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 6097620 - 6097577
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  6097620 ggatttatgcacggtgcataaggatttccttatgcaccataacc 6097577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 9106397 - 9106440
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  9106397 ggatttatgcacggtgcataaggatttccttatgcaccataacc 9106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 9595916 - 9595873
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  9595916 ggatttatgcacggtgcataaggatttccttatgcaccataacc 9595873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 19284801 - 19284844
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  19284801 ggatttatgcacggtgcataaggatttccttatgcaccataacc 19284844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 30947847 - 30947804
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  30947847 ggatttatgcacggtgcataaggatttccttatgcaccataacc 30947804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 51361555 - 51361516
Alignment:
Q  61 ggtgcataaggatttctttatgcaccataaccgcgcccac 100  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  51361555 ggtgcataaggatttccttatgcaccataaccgctcccac 51361516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 54379292 - 54379335
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  54379292 ggatttatgcacggtgcataaggatttccttatgcaccataacc 54379335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8718883 - 8718929
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || || | ||||||||||||||    
T  8718883 ttaagtacatctaatgattttggagtacaactcacagaaaccatttc 8718929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9070770 - 9070816
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || || | ||||||||||||||    
T  9070770 ttaagtacatctaatgattttggagtacaactcacagaaaccatttc 9070816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 10986483 - 10986525
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  10986483 gatttatgcacggtgcataaggatttccttatgcaccataacc 10986525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23699859 - 23699905
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||    
T  23699859 ttaagtacatctaatggttttggaatacaactcacagaaaccatttc 23699905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23718314 - 23718360
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||    
T  23718314 ttaagtacatctaatggttttggaatacaactcacagaaaccatttc 23718360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23736770 - 23736816
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||| |||||||||| || | ||||||||||||||    
T  23736770 ttaagtacatctaatggttttggaatacaactcacagaaaccatttc 23736816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 34562442 - 34562400
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  34562442 gatttatgcacggtgcataaggatttccttatgcaccataacc 34562400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 50755192 - 50755234
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    
T  50755192 ggatttatgcacggtgcataaggatttccttatgcaccataac 50755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 2941862 - 2941821
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    ||||||||| | |||||||||||||||| |||||||||||||    
T  2941862 ggatttatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 19384425 - 19384380
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||    
T  19384425 ggatttatgcacggtgcataagaatttccttatgcaccataaccgc 19384380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 27068564 - 27068531
Alignment:
Q  61 ggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||||||||||    
T  27068564 ggtgcataaggatttccttatgcaccataaccgc 27068531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 89
Target Start/End: Complemental strand, 1377830 - 1377802
Alignment:
Q  61 ggtgcataaggatttctttatgcaccata 89  Q
    |||||||||||||||||||||||||||||    
T  1377830 ggtgcataaggatttctttatgcaccata 1377802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 6926162 - 6926214
Alignment:
Q  256 ttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||| |||||||| ||||||||||||||   | ||||||||||||||||||    
T  6926162 ttcctttgcacaccttgtgctaggaaggcctcaggtgtgttaatatatttcat 6926214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 8718148 - 8718108
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  8718148 atttatgtacggtgcataaggatttccttatgcaccataac 8718108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 9070035 - 9069995
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  9070035 atttatgtacggtgcataaggatttccttatgcaccataac 9069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 11065489 - 11065433
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| |||||| |||||||| ||| || ||||||||||  |||||||||||||||||    
T  11065489 aaactatttctagatttatgtaggatgtataaggattttcttatgcaccataaccgc 11065433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 20127162 - 20127218
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||| ||||||| |||||||||||||||||  ||||||| |||| ||||    
T  20127162 aaactatttctgaatttatgcagggtgcataaggattttcttatgcatcatagccgc 20127218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51681206 - 51681150
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg 57  Q
    |||||||||||||||  ||||| |||| || | |||||||| |||||||||||||||    
T  51681206 ttaagtacatctaatagttttgaaatacaactcacagaaactatttctggatttatg 51681150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17893164 - 17893067
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  17893164 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccacgccc 17893067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45849200 - 45849103
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  45849200 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataatcgcgccc 45849103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 50039805 - 50039900
Alignment:
Q  213 ccttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    ||||| |||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  50039805 ccttgcaattattgatgtcatactgtgttgtctttggtgtttcttccttagcacacctagtgctaggaaggcgattgttgtgttaatatatttcat 50039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18952499 - 18952402
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||| || ||||| ||||||| || || | ||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18952499 ttaagtatatttaatggttttggagtacaactcacataaaccatttctggatttatgtagggtgcataaggatttctttatgcacgataaccgcgccc 18952402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17811235 - 17811331
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    |||||||||||||||| ||||||| || || | | |||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||    
T  17811235 ttaagtacatctaatggttttggagtacaactcatagaaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgcgcc 17811331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 18928909 - 18929004
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||  ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  18928909 ttaagtacatctaatggttttggagtataactcaca--aaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 18929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 31763928 - 31764018
Alignment:
Q  4 agtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||||||  ||   ||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  31763928 agtacatctaatgattttggaatgcaacccacaaaaatcatttctggatttatgtagggtgcataaggatttccttatgcaccataaccgc 31764018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1395303 - 1395396
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||||||||| || || || | ||| |||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||    
T  1395303 ttaagtacatctaatgatttttgagtacaactcacaaaaaccatttctgaatttatgcatggtgcataaggatttccttatgcaccataaccgc 1395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33157132 - 33157225
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||| || || || | |||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||||||||    
T  33157132 ttaagtacatctaatggttttagagtacaactcacagaaaccatttctggatttatgcagggtgcataatgatttccttatccaccataaccgc 33157225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 42134036 - 42133943
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||||| | || || | |||||||| |||||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  42134036 ttaagtacatctaatgattttgaagtacaactcacagaaactatttctagatttatgcaggatgcataaggatttccttatgcaccataaccgc 42133943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 42134122 - 42134182
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  42134122 aaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 42134182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14229264 - 14229171
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||||| | ||  | | ||| ||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||    
T  14229264 ttaagtacatctaatgattttgtagtacgactcacaaaaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 14229171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14389996 - 14390089
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||  ||||||| ||||||||||||||  || |||||||||||||||||    
T  14389996 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctaaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 14390089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24368568 - 24368661
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||| ||||||    |||||||||||||||  |||||||||||||||||||||    
T  24368568 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctgaatttat----ggtgcataaggattttcttatgcaccataaccgcgccc 24368661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 29945370 - 29945465
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||| |||||||| ||||||| || || |  ||||||||||||||  ||||||| || ||||||||||||||| |||||||||||||||||||||    
T  29945370 ttaagtatatctaatggttttggagtacaact--cagaaaccatttctaaatttatgcagagtgcataaggatttccttatgcaccataaccgcgccc 29945465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 32595235 - 32595332
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||||||  |||||||||| || | || | |||||||| |||||| |||||| | |||||||||||||||||| ||||||||||||||| |||||    
T  32595235 ttaagtacataaaatgattttgaaaaacaactcacagaaacaatttctagatttaagcagggtgcataaggatttccttatgcaccataaccacgccc 32595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35754720 - 35754813
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| | ||||||||||| || || | |||||||||||||||||||||||| |  |||||||| ||  ||||||||||||||||||||    
T  35754720 ttaagtacatatgatgattttggagtacaactcacagaaaccatttctggatttatgcattgtgcataaagaaatctttatgcaccataaccgc 35754813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46590650 - 46590553
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    ||||||||||||||||||||| || || || | ||| |||||||||||||||| ||| ||| |||||||| ||||  ||||||||||||| |||||||    
T  46590650 ttaagtacatctaatgattttagagtacaactcacaaaaaccatttctggattaatgcaggatgcataagaattttcttatgcaccataatcgcgccc 46590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 10974692 - 10974632
Alignment:
Q  34 acagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||    
T  10974692 acagaaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10974632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 11354412 - 11354324
Alignment:
Q  5 gtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||| ||||||||||| || || | ||| |||||||||||| |||||||||||||| |||| |||||| ||||||||| ||||||    
T  11354412 gtacatctgatgattttggagtacaactcacaaaaaccatttctgaatttatggagggtgtataatgatttccttatgcaccgtaaccg 11354324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 14229350 - 14229406
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  14229350 aaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgc 14229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 32595159 - 32595103
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  32595159 aaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 32595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 33157043 - 33156991
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  33157043 catttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 33156991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12796581 - 12796652
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagga 72  Q
    |||||||||||||||| |||| || || || | |||||||||||||||||||||||| ||||||||||||||    
T  12796581 ttaagtacatctaatggttttagagtacaactcacagaaaccatttctggatttatgcagggtgcataagga 12796652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 9628588 - 9628646
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgc 96  Q
    |||| ||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9628588 aaacaattactggatttatgcagggtgcataaggatttccttatgcaccataaccgcgc 9628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 49992680 - 49992762
Alignment:
Q  11 ctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||||||||||||||| || | |||||||||||||||| ||||||| |||||||||||| ||||   |||||| ||||||||    
T  49992680 ctaatgattttggaatacaactcacagaaaccatttctgaatttatgcagggtgcataagaattttcatatgcatcataaccg 49992762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15588623 - 15588711
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| ||||||| || || | ||||||||||||| || ||||||| || |||||||| |||||| |||||||||||||    
T  15588623 ttaagtacatctaatggttttggagtacaagtcacagaaaccatttatgaatttatgcagagtgcataa-gatttccttatgcaccataa 15588711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47693758 - 47693666
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgc--ataaggatttctttatgcaccataac 91  Q
    |||||||||||||||| |||| ||||| || | ||| ||||||||| || ||||||| |||||||  ||||||||||| ||||||||||||||    
T  47693758 ttaagtacatctaatggttttagaatacaactcacaaaaaccatttttgaatttatgcagggtgcatataaggatttccttatgcaccataac 47693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 9041040 - 9041096
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||    
T  9041040 aaaccatttctgaaattatgcagggtgcataaggatttccttatgcaccataaccgc 9041096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 14389899 - 14389843
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||    
T  14389899 aaaccatttctggatttatgcagggtgcataaggatttccttatgcactacaaccgc 14389843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 17893262 - 17893318
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  17893262 aaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 17893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 32143758 - 32143814
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  32143758 aaaccatttctagatttatgcagagtgcataaggatttccttatgcaccataaccgc 32143814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 49992573 - 49992517
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  49992573 aaaccatttctagatttatgaagtgtgcataaggatttccttatgcaccataaccgc 49992517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 18928833 - 18928783
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccat 88  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  18928833 aaaccaattctggatttatgcagggtgcataaggatttccttatgcaccat 18928783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 12070599 - 12070655
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| | ||||||| |||||||||||| ||||| |||||||||||||||||    
T  12070599 aaaccatttcggaatttatgcagggtgcataagaatttccttatgcaccataaccgc 12070655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 31763830 - 31763774
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| || ||||||| |||||| ||||||||||| |||||||||||||||||    
T  31763830 aaaccatttttgaatttatgcagggtgtataaggatttccttatgcaccataaccgc 31763774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 42786014 - 42786050
Alignment:
Q  250 tgtttcttccttagcacacctagtgctaggaaggcca 286  Q
    |||||||||||||||||||||||||||||||||||||    
T  42786014 tgtttcttccttagcacacctagtgctaggaaggcca 42786050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 47693855 - 47693911
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||  ||||||||||| |||||| ||||||| |||||||||    
T  47693855 aaaccatttctggatttataaagggtgcataaagatttccttatgcatcataaccgc 47693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 12796473 - 12796422
Alignment:
Q  43 atttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||| | |||||| ||||||||| |||||||||||||||||    
T  12796473 atttctggatttatgcaaggtgcagaaggatttccttatgcaccataaccgc 12796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 2653627 - 2653590
Alignment:
Q  248 ggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2653627 ggtgtttcttccttagcacaccttgtgctaggaaggcc 2653590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 11354500 - 11354556
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| || ||||||| || ||||||||||||||  |||||||||||||||||    
T  11354500 aaaccatttatgaatttatgcagagtgcataaggatttgcttatgcaccataaccgc 11354556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 17128681 - 17128721
Alignment:
Q  242 gattttggtgtttcttccttagcacacctagtgctaggaag 282  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  17128681 gattttggtgtttcttccttagcacatcttgtgctaggaag 17128721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 45849298 - 45849350
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||| |||| |||||||||| |||||||||||| ||||| |||||||||||||    
T  45849298 aaactatttatggatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 16976085 - 16976128
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  16976085 ggatttatgcacggtgcataaggatttccttatgcaccataacc 16976128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23319436 - 23319389
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttct 48  Q
    ||||||||||||||||||||||||||| || | || ||||||||||||    
T  23319436 ttaagtacatctaatgattttggaatacaactcacggaaaccatttct 23319389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 23817440 - 23817483
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  23817440 ggatttatgcacggtgcataaggatttccttatgcaccataacc 23817483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 24636056 - 24636099
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  24636056 ggatttatgcacggtgcataaggatttccttatgcaccataacc 24636099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 43452672 - 43452715
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  43452672 ggatttatgcacggtgcataaggatttccttatgcaccataacc 43452715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 48762267 - 48762224
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  48762267 ggatttatgcacggtgcataaggatttccttatgcaccataacc 48762224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 49936873 - 49936830
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  49936873 ggatttatgcacggtgcataaggatttccttatgcaccataacc 49936830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18057565 - 18057611
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || || | ||||||||||||||    
T  18057565 ttaagtacatctaatgattttggagtacaactcacagaaaccatttc 18057611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35197488 - 35197442
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttc 47  Q
    |||||||||||||||||||||||| || || | ||||||||||||||    
T  35197488 ttaagtacatctaatgattttggagtacaactcacagaaaccatttc 35197442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 180865 - 180898
Alignment:
Q  61 ggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||||||||| ||||||||||||    
T  180865 ggtgcataaggatttctttatacaccataaccgc 180898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 1395215 - 1395166
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||| |||||||| | |||||||| ||||||||| ||||||||||||||    
T  1395215 catttatggatttaagcagggtgcaaaaggatttccttatgcaccataac 1395166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16116637 - 16116682
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccattt 46  Q
    |||||||||||||||||||||||| || || | |||||||||||||    
T  16116637 ttaagtacatctaatgattttggagtacaactcacagaaaccattt 16116682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 18057809 - 18057854
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||| ||||||||||||    
T  18057809 ggatttatgcacggtgcataaggatttccttatacaccataaccgc 18057854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 23921015 - 23920970
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | | |||||||||||||| |||||||||||||||||    
T  23921015 ggatttatgcacgatgcataaggatttccttatgcaccataaccgc 23920970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32143660 - 32143607
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggattt 54  Q
    |||||||||||||||||||||| |||| || | ||| ||||||||||| |||||    
T  32143660 ttaagtacatctaatgattttgaaatacaactcacaaaaaccatttctagattt 32143607  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 52251539 - 52251576
Alignment:
Q  248 ggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  52251539 ggtgtttcttccttagcactccttgtgctaggaaggcc 52251576  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 11422584 - 11422620
Alignment:
Q  63 tgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  11422584 tgcataaggatttccttatgcaccataaccgctccca 11422620  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 46590748 - 46590800
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    ||||||||| | |||||||  ||||||||||| |||||| |||||||||||||    
T  46590748 aaaccatttatcgatttatacagggtgcataaagatttccttatgcaccataa 46590800  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 48973856 - 48973908
Alignment:
Q  256 ttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||| |||||||| ||||||||||||||   | ||||||||||||||||||    
T  48973856 ttcctttgcacaccttgtgctaggaaggccttaggtgtgttaatatatttcat 48973908  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23567595 - 23567687
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||||||||||||||||||||||||| || | | |||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  23567595 ttaagtacatctaatgattttggaatacaactcatagaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccg 23567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27506798 - 27506708
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||||||||||||||| |||||||||| || ||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  27506798 ttaagtacatctaatggttttggaatacaacttacataaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

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Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15809792 - 15809885
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15809792 ttaagtacatctaatggttttggagtacaactcagagaaaccatttctgaatttatggagggtgcataaggatttccttatgcaccataaccgc 15809885  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35448562 - 35448655
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||| |||||||| || || | ||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  35448562 ttaagtacatctaataattttggagtacaactcacataaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 35448655  T

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Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 38685910 - 38686005
Alignment:
Q  213 ccttgtaattatggatgtaatactgtgttgattttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||||| ||||| |||||||||||  |||||||||||||||||||||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  38685910 ccttgtaattattgatgtcatactgtgttgtctttggtgtttcttccttagcacgcctagtgccaggaatgccattgttgtgttaatatatttcat 38686005  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1672883 - 1672973
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    |||| ||||||||||| ||||| |||| || | |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  1672883 ttaaatacatctaatggttttgaaatacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34343403 - 34343496
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||| || | | |||||||||||||| ||||||| |||||||||||  ||||| |||||||||||||||||    
T  34343403 ttaagtacatctaatggttttggaatacaactcatagaaaccatttctgaatttatgcagggtgcataataatttccttatgcaccataaccgc 34343496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 38233388 - 38233444
Alignment:
Q  252 tttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38233388 tttcttccttagcacacctagtgctaggaaggccaatgttgtgttaatatatttcat 38233444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28979374 - 28979291
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgca 84  Q
    |||||||||||||||||||||| |||| || | ||| ||| |||||||||||||||| |||||||||||||||||| |||||||    
T  28979374 ttaagtacatctaatgattttgaaatacaactcacaaaaatcatttctggatttatgcagggtgcataaggatttccttatgca 28979291  T

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Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 186033 - 186126
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||||||||| |||| || | ||  |||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  186033 ttaaatacatctaatgattttgaaatacaactcacgaaaaccatttctggatttatacagggtgcataaggatttccttatacaccataaccgc 186126  T

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Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17656770 - 17656863
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||||||||||| |||||||||||| |   | |||||||||||||||||    
T  17656770 ttaagtacatctaatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataagaaaaaccttatgcaccataaccgc 17656863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23504585 - 23504489
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||||||||||| || || | ||| |||||||||||| ||||||  ||||||||||||||||| ||||||||| |||||| |||||    
T  23504585 ttaagtacatctaatgattttggagtacaactcaca-aaaccatttctgaatttatacagggtgcataaggatttttttatgcactataaccacgccc 23504489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 45409498 - 45409404
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagga-tttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | | ||||||||||| | |||||||| |||||||||||||| |||| |||||||||||||||||    
T  45409498 ttaagtacatctaatggttttggagtacaactcaaagaaaccattttttgatttatgtagggtgcataaggattttccttatgcaccataaccgc 45409404  T

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Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10585952 - 10585855
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||| ||||||| || || | | ||||||||||||| |||||||| | |||||||||||||||  ||||||||| |||||| ||||    
T  10585952 ttaagtacatctaatggttttggagtacaactcatagaaaccatttctagatttatgcatggtgcataaggattttcttatgcaccgtaaccgagccc 10585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 23567541 - 23567480
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||||    
T  23567541 aaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgcaccca 23567480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 32644107 - 32644043
Alignment:
Q  32 ttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  32644107 ttacataaaccatttctggatttatgcagggtgcataagga-ttccttatgcaccataaccgcgcc 32644043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 15808940 - 15808884
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  15808940 aaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 15808884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 17656673 - 17656617
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  17656673 aaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgc 17656617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 23347706 - 23347766
Alignment:
Q  34 acagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||    
T  23347706 acagaaaccatttctggatttatgcagggttcataaggattttcttatgcaccataaccgc 23347766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18161441 - 18161538
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggattt-ctt---tatgcaccataaccgc 94  Q
    |||||||||||||||| |||||||||| || | ||||||||||||| | |||||||||| | ||||||||||||| |||   ||||||||||||||||    
T  18161441 ttaagtacatctaatggttttggaatacaactcacagaaaccatttttagatttatggatgatgcataaggatttacttatatatgcaccataaccgc 18161538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 18757329 - 18757376
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataaccgcgcc 97  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  18757329 gatttatgcagggtgcataaggatttctttatgcaccataaccgcgcc 18757376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 17792887 - 17792937
Alignment:
Q  44 tttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  17792887 tttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 17792937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 8439177 - 8439238
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  8439177 aaaccatttatggatttatggaggatgcataaagatttccttatgcaccataaccgcaccca 8439238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1773182 - 1773110
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggat 73  Q
    |||| ||||||||||||||||||| || || | ||| ||||||||||||||| |||| |||||||||||||||    
T  1773182 ttaaatacatctaatgattttggagtacaactcacaaaaaccatttctggatgtatgcagggtgcataaggat 1773110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 10586050 - 10586106
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||    
T  10586050 aaaccatttctgaatttatgcagggtgcataaggatttccttatgcatcataaccgc 10586106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 21120247 - 21120195
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  21120247 aaaccatttctggatttatgcatggtgcataaggatttcattatgcaccataa 21120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 34343304 - 34343248
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||| ||||||| ||||||||||| |||||| |||||||||||||||||    
T  34343304 aaaccatttctgaatttatgtagggtgcataaagatttccttatgcaccataaccgc 34343248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 185936 - 185882
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||||||| ||||||| || ||||||||||||||| |||||||||||||||    
T  185936 aaaccatttctgaatttatgcagagtgcataaggatttccttatgcaccataacc 185882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24472973 - 24472917
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg 57  Q
    |||||||||||||||| ||||| | || || ||||||||||||||||||||||||||    
T  24472973 ttaagtacatctaatggttttgaagtataacttacagaaaccatttctggatttatg 24472917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 10617096 - 10617159
Alignment:
Q  245 tttggtgtttcttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    ||||||||||||||||| |||  ||| |||||||||||||||  |||||||||||||| |||||    
T  10617096 tttggtgtttcttccttggcattccttgtgctaggaaggccattgttgtgttaatataattcat 10617159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 35448288 - 35448233
Alignment:
Q  39 aaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||||||||||||||| |||| || |||||| ||||||| |||||||||    
T  35448288 aaccatttctggatttatggaggttgcaaaatgatttccttatgcatcataaccgc 35448233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 38233290 - 38233325
Alignment:
Q  140 tagtcctttcactttattaggcataggttaaactcc 175  Q
    ||||||||||||||||||||||||||||||||||||    
T  38233290 tagtcctttcactttattaggcataggttaaactcc 38233325  T

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Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 205016 - 204933
Alignment:
Q  9 atctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||| ||||| || || || | ||||||| |||||||| ||||||| |||||||||||| |||||  ||||||||||||||||    
T  205016 atctaataattttagagtacaactcacagaaatcatttctgaatttatgcagggtgcataagaatttc--tatgcaccataaccgc 204933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 319853 - 319770
Alignment:
Q  9 atctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||| ||||| || || || | ||||||| |||||||| ||||||| |||||||||||| |||||  ||||||||||||||||    
T  319853 atctaataattttagagtacaactcacagaaatcatttctgaatttatgcagggtgcataagaatttc--tatgcaccataaccgc 319770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17792784 - 17792714
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataagg 71  Q
    |||| ||||||||||| ||||||  || || | | |||||||||||||||||||||| |||||||||||||    
T  17792784 ttaaatacatctaatggttttggcgtacaactcaaagaaaccatttctggatttatgcagggtgcataagg 17792714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 18161344 - 18161290
Alignment:
Q  38 aaaccatttctggattta-tggagggtgcataaggatttctttatgcaccataac 91  Q
    |||| ||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  18161344 aaactatttctggatttaatgtagggtgcataaggatttccttatgcaccataac 18161290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 4835562 - 4835517
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  4835562 ggatttatgcacggtgcataaggatttccttatgcaccataaccgc 4835517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 5106724 - 5106778
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||||||| ||||||||||||||  || |||||||| ||||||||    
T  5106724 aaaccatttctggatttatgcagggtgcataagga--tccttatgcacaataaccgc 5106778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 7178924 - 7178872
Alignment:
Q  256 ttccttagcacacctagtgctaggaaggccaacgttgtgttaatatatttcat 308  Q
    |||||| |||||||| ||||||||||||||   ||||||||||||||||||||    
T  7178924 ttccttcgcacaccttgtgctaggaaggcctttgttgtgttaatatatttcat 7178872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 21120313 - 21120373
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||||||||||||  |||||||||||| ||||  ||| |||||||| ||||||||    
T  21120313 aaaccatttctggatttatacagggtgcataagaattttcttacgcaccatagccgcgccc 21120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 24473240 - 24473288
Alignment:
Q  45 ttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||| ||||||  |||||||||||||||||| ||||||||||||||||    
T  24473240 ttctgaatttatacagggtgcataaggatttccttatgcaccataaccg 24473288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 39657752 - 39657708
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  39657752 ggatttatgcacggtgcataaggatttccttatgcaccataaccg 39657708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 15227160 - 15227203
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  15227160 ggatttatgtacggtgcataaggatttccttatgcaccataacc 15227203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 23397443 - 23397486
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  23397443 ggatttatgcatggtgcataaggatttccttatgcaccataacc 23397486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 34633257 - 34633214
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  34633257 ggatttatgcacggtgcataaggatttccttatgcaccataacc 34633214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 43776414 - 43776453
Alignment:
Q  247 tggtgtttcttccttagcacacctagtgctaggaaggcca 286  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  43776414 tggtgtttcttccttagtacaccttgtgctaggaaggcca 43776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 35301672 - 35301630
Alignment:
Q  50 gatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    |||||||| | |||||||||||||||| |||||||||||||||    
T  35301672 gatttatgcacggtgcataaggatttccttatgcaccataacc 35301630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 1149957 - 1149916
Alignment:
Q  51 atttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||| | |||||||||||||||| |||||||||||||||    
T  1149957 atttatgcacggtgcataaggatttccttatgcaccataacc 1149916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 1209786 - 1209827
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    ||||||||| | |||||||||||||||| |||||||||||||    
T  1209786 ggatttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 15259899 - 15259854
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||| | |||||||||||||||| |||||| ||||||||||    
T  15259899 ggatttatgcacggtgcataaggatttccttatgccccataaccgc 15259854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 28979448 - 28979485
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggattt 75  Q
    |||||||||||||||||||| || ||||||||||||||    
T  28979448 aaaccatttctggatttatgcagagtgcataaggattt 28979485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 5222974 - 5222918
Alignment:
Q  39 aaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcg 95  Q
    |||||||| || ||||||| | | |||| |||||||| |||||||||||||||||||    
T  5222974 aaccatttatgaatttatgcaagctgcaaaaggatttttttatgcaccataaccgcg 5222918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 23940985 - 23941041
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||  |||||| ||| ||| ||||| | ||||||||||||||||||||||||    
T  23940985 aaaccattcttggattaatgcaggatgcatgaagatttctttatgcaccataaccgc 23941041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 23636 - 23543
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||| ||||||| || || | || ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  23636 ttaagtacatctaatggttttggagtacaactcacggaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 23543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 23726 - 23776
Alignment:
Q  40 accatttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||||||||    
T  23726 accatttatcgatttatgcagggtgcataaggatttccttatgcaccataa 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 3112 - 3203
Alignment:
Q  7 acatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccc 98  Q
    |||||||||  ||||||| || || | |||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||| ||||||    
T  3112 acatctaatagttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaagatttccttatgcacgataacagcgccc 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33769 - 33861
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||| ||||||||||| ||||||| || || | ||||||||||||| |||||||||| | |||||||||| ||||| |||||||||||||||||    
T  33769 ttaaatacatctaatggttttggagtacaaatgacagaaaccatttttggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 33861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 33671 - 33615
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  33671 aaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 33615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15668 - 15575
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| ||||| ||||| | || || | |||||||||||||||||||||||| || ||||||||| |  || |||||||||||||||||    
T  15668 ttaagtacatttaatggttttgaagtacaactcacagaaaccatttctggatttatgcagagtgcataagaaaatccttatgcaccataaccgc 15575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9602 - 9510
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccg 93  Q
    |||||||||||||||| ||||||| || || | |||||||||||||||| ||||||| || |||||||||||  || ||||||| ||||||||    
T  9602 ttaagtacatctaatggttttggagtataactcacagaaaccatttctgaatttatgcagagtgcataaggaaatccttatgcaacataaccg 9510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 20111 - 20165
Alignment:
Q  40 accatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  20111 accatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 20165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20012 - 19956
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatg 57  Q
    |||||||||||||||| |||| || || || | ||||||||||||||||||||||||    
T  20012 ttaagtacatctaatggtttttgagtacaactcacagaaaccatttctggatttatg 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 37688 - 37627
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgccca 99  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||| |||||||| ||||    
T  37688 aaaccatttatggatttatgtagggtgcataaggatttccttatgcacaataaccgcaccca 37627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 75779 - 75694
Alignment:
Q  6 tacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||||||| |||||||||| || ||||||||||||||| | |||||||| ||||||||||| ||  || || |||||||||||    
T  75779 tacatctaatggttttggaatacaacttacagaaaccatttttagatttatgcagggtgcataaagaaatccttgtgcaccataac 75694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 80759 - 80666
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||||||||||  ||||||  || || | ||||||||||||||||||||||||  |||||||||||||  || |||| ||||||||||||    
T  80759 ttaagtacatctaatagttttggggtacaactcacagaaaccatttctggatttatgcggggtgcataaggaaatccttatacaccataaccgc 80666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 80856 - 80918
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgcgcccac 100  Q
    |||||||||||| |||| || |||||||||||||||||  ||||||||||||||||| |||||    
T  80856 aaaccatttctgaatttttgcagggtgcataaggattttcttatgcaccataaccgcacccac 80918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 72654 - 72747
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||||| ||||||| ||||||| || || | ||| ||| |||||||  ||||||| || ||||||||||||||| |||||||||||||||||    
T  72654 ttaagtacgtctaatggttttggagtacaactcacaaaaatcatttctaaatttatgcagagtgcataaggatttcgttatgcaccataaccgc 72747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 51956 - 51908
Alignment:
Q  42 catttctggatttatggagggtgcataaggatttctttatgcaccataa 90  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  51956 catttctggatttatgcagggtgcataaggatttccttatgcaccataa 51908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 96054 - 96001
Alignment:
Q  38 aaaccatttctggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||||||| |||||||| |||||||||||||||||  ||||||||||||||    
T  96054 aaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataac 96001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 96151 - 96212
Alignment:
Q  1 ttaagtacatctaatgattttggaataaaatttacagaaaccatttctggatttatggaggg 62  Q
    |||||||||||||||||||||| |||| || | ||||||||||||||| |||||||| ||||    
T  96151 ttaagtacatctaatgattttgaaatacaactcacagaaaccatttctagatttatgcaggg 96212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 1073 - 1115
Alignment:
Q  243 attttggtgtttcttccttagcacacctagtgctaggaaggcc 285  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  1073 attttggtatttcttccttagcacaccttgtgctaggaaggcc 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 17917 - 17856
Alignment:
Q  32 ttacagaaaccatttctggatttatggagggtgcataaggatttctttatgcaccataaccgc 94  Q
    |||||| ||||||||||||||||||| ||| ||||||| |||||  |||||||||||||||||    
T  17917 ttacagcaaccatttctggatttatgcagg-tgcataatgattttcttatgcaccataaccgc 17856  T

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Target: scaffold0571 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 589 - 546
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  589 ggatttatgcacggtgcataaggatttccttatgcaccataacc 546  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 24404 - 24447
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataacc 92  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  24404 ggatttatgcacggtgcataaggatttccttatgcaccataacc 24447  T

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Target: scaffold0338 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 6513 - 6555
Alignment:
Q  49 ggatttatggagggtgcataaggatttctttatgcaccataac 91  Q
    ||||||||| | |||||||||||||||| ||||||||||||||    
T  6513 ggatttatgcatggtgcataaggatttccttatgcaccataac 6555  T

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