View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1715_low_155 (Length: 262)
Name: NF1715_low_155
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_low_155 |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 32789140 - 32789362
Alignment:
| Q |
29 |
tcttacttcttacttctcccttcctctttcattttgcatgtccaaacttccaactctcaatctcaatttattgaagcaaattaaccctttagaaaactca |
128 |
Q |
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| T |
32789140 |
tcttacttcttacttctcccttcctctttcattttgcatatccaaacttccaactctcaatctcaatttattgaagcaaattaaccctttagaaaactca |
32789239 |
T |
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| Q |
129 |
catatccaaattttccatacatatagacatattctatattcttaagatcaaaagcatccattatctcctcatcacaattcttcctttaagagctagctct |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32789240 |
catatccaaattttccatacatatagacatattctatattcttaagatcaaaaccatccattatctcctcatcacaattcttcctttaagagctagctct |
32789339 |
T |
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| Q |
229 |
taaatttattgaattcctttcat |
251 |
Q |
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||||||||||||||||||||||| |
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| T |
32789340 |
taaatttattgaattcctttcat |
32789362 |
T |
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