View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1715_low_209 (Length: 231)
Name: NF1715_low_209
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_low_209 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 30135413 - 30135629
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135413 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30135512 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135513 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
30135612 |
T |
 |
| Q |
201 |
ccatctcacaaatcaac |
217 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
30135613 |
ccatctcacaaatcaac |
30135629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 30021476 - 30021261
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30021476 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30021377 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30021376 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
30021277 |
T |
 |
| Q |
201 |
ccatctcacaaatcaa |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30021276 |
ccatctcacaaatcaa |
30021261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 30039219 - 30039435
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30039219 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30039318 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30039319 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
30039418 |
T |
 |
| Q |
201 |
ccatctcacaaatcaac |
217 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30039419 |
gcatctcacaaatcaac |
30039435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 30079882 - 30079666
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30079882 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30079783 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30079782 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
30079683 |
T |
 |
| Q |
201 |
ccatctcacaaatcaac |
217 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30079682 |
gcatctcacaaatcaac |
30079666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 30108697 - 30108913
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30108697 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30108796 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30108797 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
30108896 |
T |
 |
| Q |
201 |
ccatctcacaaatcaac |
217 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30108897 |
gcatctcacaaatcaac |
30108913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 30233357 - 30233573
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30233357 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30233456 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30233457 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
30233556 |
T |
 |
| Q |
201 |
ccatctcacaaatcaac |
217 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30233557 |
gcatctcacaaatcaac |
30233573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 30120715 - 30120875
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30120715 |
cttccaattagagacttgttttttcctcaaagcctttgccgtagtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
30120814 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcct |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30120815 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcct |
30120875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 30278006 - 30277798
Alignment:
| Q |
1 |
cttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggt |
100 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||| || ||| |||||||| |
|
|
| T |
30278006 |
cttccaagcagagacatgttttttcctcaaagcctttgccactgtaactatcaaaaggggcaaaccagaacaacatttggccactttttctgcaattggc |
30277907 |
T |
 |
| Q |
101 |
tttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgc |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30277906 |
tttatattgaattcttgaacaacatcacctgccattttctcaaataatttccaactatcatcctcaaataaaacttcaagtctaaattctttttgagtgc |
30277807 |
T |
 |
| Q |
201 |
ccatctcac |
209 |
Q |
| |
|
| ||||||| |
|
|
| T |
30277806 |
caatctcac |
30277798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 30250383 - 30250197
Alignment:
| Q |
24 |
tcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggttttatattgaattcgtgaacaac |
123 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||| ||||||||||||||||| || || |||| ||||| || |||||||||||||| |||||||| |
|
|
| T |
30250383 |
tcctcaaagcctttgctactgtaactatcaaaaggggtaaaccagcacaacattttgccacttttactgcaatgggctttatattgaattcttgaacaac |
30250284 |
T |
 |
| Q |
124 |
atcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgcccatctcaca |
210 |
Q |
| |
|
|||||||| ||| ||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30250283 |
atcacctgtcattttcacaaacaatttccaactatcgtcctcatgtaaaacttcaagtctaaattctttctgagtgcccatctcaca |
30250197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 30186298 - 30186489
Alignment:
| Q |
19 |
ttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggttttatattgaattcgtga |
118 |
Q |
| |
|
|||||||||||||||||| || || || ||||||||||||||||| ||||||| |||||| |||| | |||||||| |||||||||||||| ||| |
|
|
| T |
30186298 |
ttttttcctcaaagccttagcaacagtaacaatcaaaaggggcaaacctgcacaacgtttggccacctccactgcaattggctttatattgaattcttga |
30186397 |
T |
 |
| Q |
119 |
acaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgcccatctcaca |
210 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||||| | ||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
30186398 |
acaacatcacctgccattttctcaaacaatttccaactatcctcctcatgcaaagcttcaagtctgaattctttctgagtgcccatctcaca |
30186489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 30788749 - 30788542
Alignment:
| Q |
2 |
ttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggtt |
101 |
Q |
| |
|
||||||| | ||| || ||||||||||||||| |||||| || || |||| ||||||||||||||||||||| |||| || | || |||||||||| |
|
|
| T |
30788749 |
ttccaatcatagaatttttttttcctcaaagcttttgccactgcaacaatcagaaggggcaaaccagcacaacaaatggccacttctactgcaattggtt |
30788650 |
T |
 |
| Q |
102 |
ttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgcc |
201 |
Q |
| |
|
| ||||| || || |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30788649 |
taatattaaaatcttgaacaacatcacctgccattttctcaaataatttccaactatcttcctcaagtaaaacttcaagtctaaattctttttgagtgcc |
30788550 |
T |
 |
| Q |
202 |
catctcac |
209 |
Q |
| |
|
||||||| |
|
|
| T |
30788549 |
aatctcac |
30788542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 30169663 - 30169472
Alignment:
| Q |
19 |
ttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggttttatattgaattcgtga |
118 |
Q |
| |
|
|||||| ||||||||||| ||| ||| ||||||||||||||||| ||||||||||| | || || | || |||||||| |||||||| ||||| ||| |
|
|
| T |
30169663 |
tttttttctcaaagccttcgccactgtaactatcaaaaggggcaacccagcacaacaccttgccacttctactgcaattggctttatatttaattcatga |
30169564 |
T |
 |
| Q |
119 |
acaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgcccatctcaca |
210 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30169563 |
acaatatcacctgccattttctcaaacaatttccaactatcctcttgttgtaaaacttcaagtctaaattctttttgaatgcccatctcaca |
30169472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 190
Target Start/End: Complemental strand, 30066691 - 30066503
Alignment:
| Q |
2 |
ttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggtt |
101 |
Q |
| |
|
||||||| | ||| || ||| |||||||||||||||||| || || |||||||| || ||||||||||||| | |||| || | || |||||||||| |
|
|
| T |
30066691 |
ttccaatcaaagatttttttcttcctcaaagcctttgccacagtaacaatcaaaagcggaaaaccagcacaacgtctggccacttctactgcaattggtt |
30066592 |
T |
 |
| Q |
102 |
ttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattct |
190 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
30066591 |
ttatattgaaatcttgaacaacatcacctgccattttcttaaacaattgccaactatcctcctcatttaaaacttcaagtctaaattct |
30066503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 190
Target Start/End: Complemental strand, 30010196 - 30010008
Alignment:
| Q |
2 |
ttccaattagagacttgttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggtt |
101 |
Q |
| |
|
||||||| | ||| || ||| ||||| |||||||||||| || || |||||||| || || |||||||||| | |||| || |||| ||||||||| |
|
|
| T |
30010196 |
ttccaatcaaagatttttttcttcctaaaagcctttgccacagtaacaatcaaaagcggaaatccagcacaacgtctggccacttttactacaattggtt |
30010097 |
T |
 |
| Q |
102 |
ttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattct |
190 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
30010096 |
ttatattgaaatcttgaacaacatcacctgccattttcttaaacaattgccaactatcctcctcatttaaaacttcaagtctaaattct |
30010008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 30222203 - 30222036
Alignment:
| Q |
19 |
ttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggttttatattgaattcgtga |
118 |
Q |
| |
|
|||||| ||||||||||| ||| || ||||||||||| || || || ||||||||| |||| || | || ||||||||| |||||||| ||||| ||| |
|
|
| T |
30222203 |
tttttttctcaaagccttcgccacagtaactatcaaaagaggtaacccggcacaacatctggccacttctaccgcaattggctttatattaaattcatga |
30222104 |
T |
 |
| Q |
119 |
acaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaa |
186 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| |||||||||| | | ||||| ||||||||||| |
|
|
| T |
30222103 |
acaatatcacctgccattttctcaaacaatttccaactatcctcctgatgcaaaacatcaagtctaaa |
30222036 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 30090745 - 30090554
Alignment:
| Q |
19 |
ttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggttttatattgaattcgtga |
118 |
Q |
| |
|
|||||| ||||||||||| ||| || ||||||||||| || || | ||||||||| |||| || | || ||||||||| |||||||| ||||| ||| |
|
|
| T |
30090745 |
tttttttctcaaagccttcgccacagtaactatcaaaagaggtaactcggcacaacatctggccacttctaccgcaattggctttatattaaattcatga |
30090646 |
T |
 |
| Q |
119 |
acaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgcccatctcaca |
210 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| |||||||||| | | ||||| |||| ||||||| |||| ||| || ||||||||| |
|
|
| T |
30090645 |
acaatatcacctgccattttctcaaacaatttccaactatcctcctgatgcaaaacatcaattctaaatgctttctgaatgttcatctcaca |
30090554 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 30127350 - 30127159
Alignment:
| Q |
19 |
ttttttcctcaaagcctttgccgttgtgactatcaaaaggggcaaaccagcacaacatttggcaacctttatcgcaattggttttatattgaattcgtga |
118 |
Q |
| |
|
|||||| ||||||||||| ||| || ||||||||||| || || | ||||||||| |||| || | || ||||||||| |||||||| ||||| ||| |
|
|
| T |
30127350 |
tttttttctcaaagccttcgccacagtaactatcaaaagaggtaactcggcacaacatctggccacttctaccgcaattggctttatattaaattcatga |
30127251 |
T |
 |
| Q |
119 |
acaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctttttgagtgcccatctcaca |
210 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| |||||||||| | | ||||| |||| ||||||| |||| ||| || ||||||||| |
|
|
| T |
30127250 |
acaatatcacctgccattttctcaaacaatttccaactatcctcctgatgcaaaacatcaattctaaatgctttctgaatgttcatctcaca |
30127159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 30271972 - 30271857
Alignment:
| Q |
92 |
gcaattggttttatattgaattcgtgaacaacatcacctgccatcttctcaaacaatttccagctatcctcctcaagtaaaacttcaagtctaaattctt |
191 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| | |||| |||||| |||||||| ||||||| |
|
|
| T |
30271972 |
gcaattggttttatattgaaatcttgaacaacatcacctgccattttctcaaacaatttccaactatcttgctcatgtaaaatttcaagtc--aattctt |
30271875 |
T |
 |
| Q |
192 |
tttgagtgcccatctcac |
209 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
30271874 |
tttgagtgcccatctcac |
30271857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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