View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1715_low_33 (Length: 493)
Name: NF1715_low_33
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_low_33 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 460; Significance: 0; HSPs: 28)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 1 - 472
Target Start/End: Original strand, 14552551 - 14553022
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552551 |
tgattttggcgtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
14552650 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552651 |
ggtttagggtttcatcccccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
14552750 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14552751 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatgagttt |
14552850 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552851 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
14552950 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattctggg |
472 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14552951 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattctggg |
14553022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 53 - 472
Target Start/End: Original strand, 14543252 - 14543671
Alignment:
| Q |
53 |
tctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtttagggtttcatcctccaatcactacttttggggctgctttgatagcca |
152 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||| |||| ||||||| |||||||||| |||| |
|
|
| T |
14543252 |
tctatatttggttcaaaggatttgattaagtcattggaggaagttaaggatttagggtttcatccttcaatgactaattttgggactgctttgatggcca |
14543351 |
T |
|
| Q |
153 |
agaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcc |
252 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | | ||||||||||||||||| ||||||| |
|
|
| T |
14543352 |
agaaatgtatgagtaaaaaactttgggatgagaaaattgatacctttaagaaatggggttggtctgatgaggctattattcgagcatttagatgtcgtcc |
14543451 |
T |
|
| Q |
253 |
tgacttgttgttgacttcaattgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacat |
352 |
Q |
| |
|
||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
14543452 |
tgaattgttgttggcttcaattgataagattaatttggtgatgagtttctgggtcaaccaattgggttggaattccttggcacttactaaaaggccacat |
14543551 |
T |
|
| Q |
353 |
atttttagttatagtttggagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttg |
452 |
Q |
| |
|
||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||| |||| | |||||||||||| | ||||||||||||||||||||| |
|
|
| T |
14543552 |
atttttagttacagtttggataaaacgatcactccaagggcctcagttttgcaatttcttttaatgaaaggtttgcgagaaaagaatgcaagcttagttg |
14543651 |
T |
|
| Q |
453 |
caccatttgattattctggg |
472 |
Q |
| |
|
||||||||| |||||||||| |
|
|
| T |
14543652 |
caccatttggttattctggg |
14543671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 53 - 456
Target Start/End: Original strand, 14529026 - 14529429
Alignment:
| Q |
53 |
tctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtttagggtttcatcctccaatcactacttttggggctgctttgatagcca |
152 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||| |||| ||||||| |||||||||| |||| |
|
|
| T |
14529026 |
tctatatttggttcaaaggatttgattaagtcattggaggaagttaaggatttagggtttcatccttcaatgactaattttgggactgctttgatggcca |
14529125 |
T |
|
| Q |
153 |
agaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcc |
252 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | | ||||||||||||||||| |||| || |
|
|
| T |
14529126 |
agaaatgtatgagtaaaaaactttgggatgagaaaattgatacctttaagaaatggggttggtctgatgaggctattattcgagcatttagatgtcggcc |
14529225 |
T |
|
| Q |
253 |
tgacttgttgttgacttcaattgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacat |
352 |
Q |
| |
|
||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
14529226 |
tgaattgttgttggcttcaattgataagattaatttggtgatgagtttctgggtcaaccaattgggttggaattccttggcacttactaaaaggccacat |
14529325 |
T |
|
| Q |
353 |
atttttagttatagtttggagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttg |
452 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| |||| | |||||||||||| ||||||||||| ||||||||| |
|
|
| T |
14529326 |
atttttagttacagtttggataaaaggatcactccaagggcctcagttttgcaatttcttttaatgaaaggtttgcaaaaaaagaatgctagcttagtta |
14529425 |
T |
|
| Q |
453 |
cacc |
456 |
Q |
| |
|
|||| |
|
|
| T |
14529426 |
cacc |
14529429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 86 - 461
Target Start/End: Original strand, 14525198 - 14525573
Alignment:
| Q |
86 |
ttggaggaagttaaaggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgaga |
185 |
Q |
| |
|
|||||||||||||| |||||||||||||| | | ||| | ||||||||||| |||||| | || |||||| |||||||||||| |||||||||||||| |
|
|
| T |
14525198 |
ttggaggaagttaagggtttagggtttcacctttcaacttcaacttttggggcagctttggttgcaaagaaatgtatgagtaaaacactttgggatgaga |
14525297 |
T |
|
| Q |
186 |
aagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaa |
285 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14525298 |
aagttgatgtttttaagaaatggggttggactgatgaagatgttattcgagcatttagaggtcgtcctgaattgttgttgacttcaattgataagattaa |
14525397 |
T |
|
| Q |
286 |
tttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcatt |
385 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||| | |||||||| || |
|
|
| T |
14525398 |
tttggtgatcagtttttgggttaatcaattgggttggaattccttggcactttctaaaaggccacgtatttttagttacagtttgcataaaaggattgtt |
14525497 |
T |
|
| Q |
386 |
ccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttg |
461 |
Q |
| |
|
|||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |
|
|
| T |
14525498 |
ccaagggcattggttctgcagtatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttggttgaaccgtttg |
14525573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 15023977 - 15024436
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15023977 |
tgattttggagtttctgattctgtcattgctagattgcttcaaaataagccatctatatttggttcaaaggatttgattaagtcattggaggaagttaag |
15024076 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
||||||||||| ||||| ||| || ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15024077 |
agtttagggtttgatccttcaacagcttcttttggggttgctttggtagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgacaccttta |
15024176 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
||||||||||||||||||||||| || || || ||||||||| ||| ||| | || ||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
15024177 |
agaaatggggttggtctgatgaaaatattgttgaagcatttaggagtcaacctaatttaatgttggtttcaattgataagattaatttggtgatgagttt |
15024276 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
||||||||||||||||| |||| |||| |||| |||||||||| ||| |||| ||| |||||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
15024277 |
ttgggtcaatcaattggattggaattcattggaacttgctaaatttccaaatatgttttgttatagtttacataaaaggatcattccaagagcctcagtt |
15024376 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccattt |
460 |
Q |
| |
|
| ||||| |||| |||| ||||||||| | |||||||||||||||||||| |||||||| |
|
|
| T |
15024377 |
tggcaatttcttttgataaaaggtttgcgacaaaagaatgcaagcttagttacaccattt |
15024436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 14534199 - 14534658
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||| ||| | || ||||| | || |||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
14534199 |
tgattttggaattcctcattctgtcattgctagattgattcgatctagaccatttttaatttgttcaaaggatttgattaattcattggaggaaattaag |
14534298 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
|||||||||||| ||||| ||| |||||||||||| ||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
14534299 |
ggtttagggtttgatccttcaacgactacttttgggtatgctttgttagccaataactgtacgagtaaaaaactttgggatgagaaagttgatgtcttga |
14534398 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||| ||| |||||| || |||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
14534399 |
agaaatggggttggtctgatgaagatgttatccgggcatttaggtgtcatcctgatatgatgttgacttcaattgaaaagattaatttggtgatgagttt |
14534498 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||| | | |||||||||||||| |||| ||||||||| | ||| |
|
|
| T |
14534499 |
ttgggtcaatcaattgggttgggattcattggcacttaccaaacggccacatattttaactcatagtttggagaaatggattgttccaaggggattggtt |
14534598 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccattt |
460 |
Q |
| |
|
|||||| |||| |||||||||| ||| | ||||||||||| ||||||||| |||||||| |
|
|
| T |
14534599 |
gtgcaatttcttttgatgaaaggcttgcgaaaaaagaatgccagcttagttacaccattt |
14534658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 470
Target Start/End: Original strand, 15008043 - 15008509
Alignment:
| Q |
4 |
ttttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggt |
103 |
Q |
| |
|
||||||||| ||| ||||| |||||||| ||||||||| | | |||||||||||| |||||| ||||||||||||||||| ||||||||||| || |
|
|
| T |
15008043 |
ttttggagtttctgattctaccattgctaaattgcttcagaaaaggccatctatatttggttcaactgatttgattaagtcattagaggaagttaagcgt |
15008142 |
T |
|
| Q |
104 |
ttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaaga |
203 |
Q |
| |
|
||||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15008143 |
ttagggtttcatccttcaacaactacttttgggactgctttgacagccaagaaaggtttaagtaaaaaactttgggatgagaaagttgatgcctttaaga |
15008242 |
T |
|
| Q |
204 |
aatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagtttttg |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||| | | |||||| |||| ||||| |||||||||||| |||| | |||||| |
|
|
| T |
15008243 |
aatggggttggtctgatgaagatgttattcgagcatttaggagttatcctaatattttgttggcttccattgaaaagattaatttgttgatgattttttg |
15008342 |
T |
|
| Q |
304 |
ggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagttttg |
403 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||| | ||| ||| ||| |||||||||| | ||||||||||||||||||| ||||||||| |
|
|
| T |
15008343 |
ggtcaatcaattgggttgggattccttggaacttactaaatgtccaattatgtttggttatagtttacatcaaaggatcattccaagggcatcagttttg |
15008442 |
T |
|
| Q |
404 |
caatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattctg |
470 |
Q |
| |
|
|||| ||| | |||||||||||| | ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15008443 |
caatttctatttatgaaaggtttgcgagaaaagaatgcaagcttagttgcaccatttacttattctg |
15008509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 5 - 460
Target Start/End: Original strand, 14520362 - 14520814
Alignment:
| Q |
5 |
tttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtt |
104 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||| ||||||||||| ||| |
|
|
| T |
14520362 |
tttggagtttctgattctaacattgctagattgcttcaaacaaggtcatctatatttggttcaactgatttgattaagtcattagaggaagttaagtgtt |
14520461 |
T |
|
| Q |
105 |
tagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaagaa |
204 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14520462 |
tagggtttcatccttcaaagactacttttggggctgctttgatagccaagaaatgt---agtaaaaaactttgggatgagaaagttgatgtctttaagaa |
14520558 |
T |
|
| Q |
205 |
atggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagtttttgg |
304 |
Q |
| |
|
|||||| ||||||||||||| ||| || |||| |||||| || ||| | || ||| |||| | || ||||||||||||| |||| | ||||||| |
|
|
| T |
14520559 |
atggggctggtctgatgaagttgtcatccgagtatttaggtttcagcctaatttattgggtgcttccaatggtaagattaatttgttgatgaatttttgg |
14520658 |
T |
|
| Q |
305 |
gtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagttttgc |
404 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| | |||| ||| ||| |||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
14520659 |
gtcaatcaattgggttgggattccttggcacttactaaatgtccacttatgtttggttatagtttacataaaaggatcattccaagggcctcagttttgc |
14520758 |
T |
|
| Q |
405 |
aatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccattt |
460 |
Q |
| |
|
||| |||| |||||||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
14520759 |
aatttcttttgatgaaaggtttgcgaaaaaagaatgcaagcttagttacaccattt |
14520814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 25 - 470
Target Start/End: Complemental strand, 15003970 - 15003525
Alignment:
| Q |
25 |
cattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtttagggtttcatcctccaatc |
124 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | || ||| |
|
|
| T |
15003970 |
cattgctagattgcttcaaaaaaggccatctatatttggttcaaaggatttgattatgtcattggaggaagttaagtgtttagggtttgacgcttcaacg |
15003871 |
T |
|
| Q |
125 |
actacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaag |
224 |
Q |
| |
|
|| ||||||||| |||||||||| ||||| || |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
15003870 |
accacttttgggactgctttgatgaccaagcaatgtatgagtaaaatactttgggataagaaagttgacgtctttaagaaatggggttggtctgatgaag |
15003771 |
T |
|
| Q |
225 |
atgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagtttttgggtcaatcaattgggttggga |
324 |
Q |
| |
|
|||||||||||| |||||| ||| ||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15003770 |
atgttattcgagtatttaggtgtcagcctagtttgatgttggcttcaattgataagattaatttggtgatgagtttttgggtcaatcaattgggttggga |
15003671 |
T |
|
| Q |
325 |
ttccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggt |
424 |
Q |
| |
|
|| |||||||||| ||||| | |||| ||| ||| | |||||||| | ||||||||||||||||||||||||||| |||||| |||| | ||||||||| |
|
|
| T |
15003670 |
tttcttggcacttactaaatgtccacttatgtttggatatagtttacataaaaggatcattccaagggcctcagttctgcaatttctttttatgaaaggt |
15003571 |
T |
|
| Q |
425 |
ttgaggaaaaagaatgcaagcttagttgcaccatttgattattctg |
470 |
Q |
| |
|
||| | |||| ||||| ||||||||| |||| ||| |||||||| |
|
|
| T |
15003570 |
ttgcgagaaaaaaatgcgagcttagtttcaccgtttacttattctg |
15003525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 53 - 470
Target Start/End: Original strand, 14512576 - 14512993
Alignment:
| Q |
53 |
tctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtttagggtttcatcctccaatcactacttttggggctgctttgatagcca |
152 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| || | ||||||||| |||||||||||||||||| |
|
|
| T |
14512576 |
tctatatttggttcaaaggatttgattaagtcattagaggaagttaaggatttagggtttcatccttcattgactacttttagggctgctttgatagcca |
14512675 |
T |
|
| Q |
153 |
agaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcc |
252 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||| || || || |
|
|
| T |
14512676 |
agaaaggtatgactaaaaaactttgggataagaaagttgatgtctttaagaaacggggttggtctggtgaagctgttattcatgcatttcgaattcagcc |
14512775 |
T |
|
| Q |
253 |
tgacttgttgttgacttcaattgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacat |
352 |
Q |
| |
|
| | || ||||| ||||||| |||||||| ||| | || ||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
14512776 |
taatttaatgttggtttcaattcataagattgattcgtcaatgagtttttgggtcaatcaattgggttggaattccttggcacttatcaaactaccacaa |
14512875 |
T |
|
| Q |
353 |
atttttagttatagtttggagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttg |
452 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||| | |
|
|
| T |
14512876 |
atgttttcttatagtttggagaaaaggatcattccaagggcctcagttttgcaatttcttttgatgaaaggtttgcgaaaaaagaatgcaagcttaacta |
14512975 |
T |
|
| Q |
453 |
caccatttgattattctg |
470 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
14512976 |
caccatttacttattctg |
14512993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 50 - 470
Target Start/End: Complemental strand, 14850401 - 14849981
Alignment:
| Q |
50 |
ccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaaggtttagggtttcatcctccaatcactacttttggggctgctttgatag |
149 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| | || |||||| |||||| || |
|
|
| T |
14850401 |
ccatctgtatttggttcaaaggatttgattaagtcattggaggaagttaagtgtttagggtttgatccttcaaagaatagttttggaattgctttagcag |
14850302 |
T |
|
| Q |
150 |
ccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcg |
249 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
14850301 |
caaagaaaggtttgagtaaaaaactttgggatgagaaagttgatgcctttaagaaatggggttggtctgatgaagatgttattcgagtatttaggattca |
14850202 |
T |
|
| Q |
250 |
tcctgacttgttgttgacttcaattgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggcca |
349 |
Q |
| |
|
||| || |||| ||||||| |||||||| ||||| | || |||||||||||||||| |||||||||| |||||||||||||| | || ||||| |
|
|
| T |
14850201 |
acctattttaatgtttgtttcaatttataagattgatttgttaatgagtttttgggtcaatcgattgggttggaattccttggcacttaccaagcggcca |
14850102 |
T |
|
| Q |
350 |
catatttttagttatagtttggagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttag |
449 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
14850101 |
catatgttttcttatagtttggagaaaaggatcatcccaagggcctcagttatgcaatttcttttgatgaaaggtttgcgaaaaaagaatgcgagcttag |
14850002 |
T |
|
| Q |
450 |
ttgcaccatttgattattctg |
470 |
Q |
| |
|
|| ||||||||| |||||||| |
|
|
| T |
14850001 |
ttacaccatttgcttattctg |
14849981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 14547341 - 14547800
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||| |||||||||| | |||||||||||| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
14547341 |
tgattttggagtttctgattctgtcattgctagcttgcttcaaaaaaggccatctatatttggttcgactgatttgattaagtcattggaggaagttaag |
14547440 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||||||||||||| | ||||||||| |||||||||||| || |||||||||||||| | ||||||| |
|
|
| T |
14547441 |
tgtttagggtttgatccttcaacggctacttttggggctgctttgttcgccaagaaatgtatgagtaaaacacgatgggatgagaaagtcgccgtcttta |
14547540 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
||||||||||||||||||||||| | || ||| ||||||||| | |||| ||| |||||||||||||||| ||||||||||| ||||| ||| |
|
|
| T |
14547541 |
agaaatggggttggtctgatgaaactttttttcaagcatttaggttgcatcctagtttgatgttgacttcaattgaaaagattaattttgtgatgcattt |
14547640 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| ||||| | |||||||| ||| |||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
14547641 |
ttgggtcaaccaattgggttgggattccttggaacttactaaatgtccacatatgtttggttatagtttacatcaaaggatcattccaagggcctcagtt |
14547740 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccattt |
460 |
Q |
| |
|
||||||| |||| |||||||||||||| | ||||||| |||||||||| |||||||| |
|
|
| T |
14547741 |
ttgcaatttcttttgatgaaaggtttgcaagataagaatgaaagcttagttacaccattt |
14547800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 468
Target Start/End: Original strand, 15019942 - 15020409
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||| | ||| ||||| ||||||||||||||||| || | |||||||||||| ||||||| ||| ||||||||| |||||||||| |||| |
|
|
| T |
15019942 |
tgattttggattttctgattctaccattgctagattgcttcgaacaaggccatctatatttggttcaaatgatatgattaagttattggaggaaattaag |
15020041 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
|||||||||||| | ||| ||| || |||||||| |||||||||| ||||| || || |||| | |||||||||| |||||||||| ||||||| |
|
|
| T |
15020042 |
ggtttagggtttaaaccttcaacgaccgcttttgggactgctttgatgaccaagcaattgttgggtaacatactttgggataagaaagttgacgtcttta |
15020141 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15020142 |
agaaatggggttggtctgatgaagatgttattcgagtatttaggagtcagcctggtttgatgttgacttcaattgataagattaatttggtgatgagttt |
15020241 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
|||||| |||||| ||||||||||| ||||||||||| |||||| |||| ||| ||| || |||||| ||||||||||||||||| ||||||||| |
|
|
| T |
15020242 |
ttgggttaatcaaatgggttgggatcccttggcacttactaaaaatccacttatgttttcttttagtttacctaaaaggatcattccaagagcctcagtt |
15020341 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattc |
468 |
Q |
| |
|
||||||| |||| |||||||||||||| | || ||||| || ||||||||| |||||||| |||||| |
|
|
| T |
15020342 |
ttgcaatttcttttgatgaaaggtttgcgaaagaagaaggcgagcttagttagaccatttgcttattc |
15020409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 468
Target Start/End: Original strand, 31969367 - 31969834
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||||| | | |||||| ||||||||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
31969367 |
tgattttggagtttatgattctgccattgctagattgcttcgaactaggaaatctatatcttgttcaaatgatttgattaagtcattggaggacgttaag |
31969466 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
|||||||||||| | ||| ||| | | |||||| |||||||| | ||||| || |||||||||| | |||||||||| |||||||||| ||||||| |
|
|
| T |
31969467 |
ggtttagggtttgacccttcaacgatcgcatttgggactgctttggtgaccaagcaatgtatgagtaacatactttgggataagaaagttgacgtcttta |
31969566 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||| ||| ||| |||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
31969567 |
agaaatggggttggtctgatgaagatgttattcgagtatttaggagtcagcctagtttgatgttgacttcaattgataagattaatctgttgatcagttt |
31969666 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
|||||| |||||| ||||||||||| ||||||||||| ||||| |||| ||| ||| || |||||| | ||||||||||||||||| ||||| ||| |
|
|
| T |
31969667 |
ttgggttaatcaaatgggttgggatcccttggcacttactaaatctccacttatgttttcttttagtttacataaaaggatcattccaagagcctcggtt |
31969766 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattc |
468 |
Q |
| |
|
||||||| |||| |||||||||||||| | || ||||| || ||||||||| |||||||| |||||| |
|
|
| T |
31969767 |
ttgcaatttcttttgatgaaaggtttgcgaaagaagaaggcgagcttagttagaccatttgcttattc |
31969834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 470
Target Start/End: Original strand, 15013447 - 15013916
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||||| | | |||||| ||||||||||||||||| || || |||||||| ||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
15013447 |
tgattttggagtttgtgattctgccattgctagattgcttcgaactaggaaatctatatattgttcaaatgatttgattaagtcattggaggacgttaag |
15013546 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
|||||||||||| | ||| ||| | |||||||| |||||||| | ||||| | |||||||||| | |||||||||| |||||||||| ||||||| |
|
|
| T |
15013547 |
ggtttagggtttgacccttcaacggccgcttttgggactgctttggtgaccaagcattgtatgagtaacatactttgggataagaaagttgacgtcttta |
15013646 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||| ||| ||| ||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
15013647 |
agaaatggggttggtctgatgaagatgttattcgagtatttaggtgtcagcctagtttgatgttggcttcaattgataagattaatttggtgatgagttt |
15013746 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||| |||| ||||| |||| ||| ||| |||||||||| ||| ||||||||||||| ||||||||| |
|
|
| T |
15013747 |
ttgggttaatcaaatgggttgggatcccttggaacttactaaatctccacttatgtttggttatagtttaccaaaacggatcattccaagagcctcagtt |
15013846 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattctg |
470 |
Q |
| |
|
||||||| | || |||||||||||||| ||||||| ||||| ||||||| | ||||||| |||||||| |
|
|
| T |
15013847 |
ttgcaatttattttgatgaaaggtttgcggaaaaaaaatgcgagcttaggtagaccattttcttattctg |
15013916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 470
Target Start/End: Original strand, 14567590 - 14568059
Alignment:
| Q |
1 |
tgattttggagtgtctcattctgtcattgctagattgcttcaaattaaaccatctatattttgttcaaaggatttgattaagtcattggaggaagttaaa |
100 |
Q |
| |
|
|||||||||||| ||| || |||||||||||| |||||||| | ||||||||| || |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14567590 |
tgattttggagtttctgataatgtcattgctagtttgcttcagtcaaggccatctatagttggttcaaaggaattgattaagtcattggaggaagttaag |
14567689 |
T |
|
| Q |
101 |
ggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaactttgggatgagaaagttgatgtcttta |
200 |
Q |
| |
|
||||||||||| ||||| ||| || ||||||||| ||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
14567690 |
agtttagggtttgatccttcaacagcttcttttggggttgctttggcagccaagaaatgtatgagaaaaaaacgttgggatgagaaagttgatgccttta |
14567789 |
T |
|
| Q |
201 |
agaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataagattaatttggtgatcagttt |
300 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| | | ||| | || ||||| ||||||| |||||||| ||| | | || ||||| |
|
|
| T |
14567790 |
agaaatggggttggtctgatgaagctgttattcaagcatttcggttgcagcctaatttaatgttggtttcaattcataagattgattcgttaatgagttt |
14567889 |
T |
|
| Q |
301 |
ttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||| | ||| ||| || | ||| ||| ||||||||||||||||| ||||||||||| | ||| |
|
|
| T |
14567890 |
ttgggtcaatcaattgggttggaattcattggcacttaccaaactaccaaatgtgttttgtttaagtttggagaaaaggattattccaagggcattggtt |
14567989 |
T |
|
| Q |
401 |
ttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagcttagttgcaccatttgattattctg |
470 |
Q |
| |
|
|||||| |||| |||||||||||||| | ||||||||||||||||||| | ||||||||| |||||||| |
|
|
| T |
14567990 |
gtgcaatttcttttgatgaaaggtttgcgaaaaaagaatgcaagcttaggtacaccatttgcttattctg |
14568059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 73 - 437
Target Start/End: Complemental strand, 14847668 - 14847310
Alignment:
| Q |
73 |
tttgattaagtcattggaggaagttaaaggtttagggtttcatcctccaatcactacttttggggctgctttgatagccaagaaaggtatgagtaaaaaa |
172 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||| ||| ||||| |||| |||||||| |||||| | ||||||||||||||| ||| |||||||| | |
|
|
| T |
14847668 |
tttgattaagtcat----ggaggttaacggtttaggttttgatccttcaatgactactttcggggcttccttgatagccaagaaatgtaggagtaaaaca |
14847573 |
T |
|
| Q |
173 |
ctttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaa |
272 |
Q |
| |
|
| |||||||||||| |||||||||||| ||||| |||||||||||||||||| | || ||| ||||||||| | || ||| ||||| ||||| |
|
|
| T |
14847572 |
cgttgggatgagaa-gttgatgtctttgagaaacggggttggtctgatgaagctatttttcaagcatttaggttgcagtctagtttgatgttggcttcag |
14847474 |
T |
|
| Q |
273 |
ttgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttgga |
372 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||||| ||| |||||| | |
|
|
| T |
14847473 |
ttcaaaagattaatttggtgatgagtttttgggtcaatctattgggttggaactccttggcacttgctaaaaggccgcatatttttggtttaagtttgca |
14847374 |
T |
|
| Q |
373 |
gaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaaga |
437 |
Q |
| |
|
||||||||||||||||||| | ||| ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
14847373 |
gaaaaggatcattccaaggacactggttctgcaatatcttctgatgaaa-gtttgaggaaaaaga |
14847310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 448
Target Start/End: Original strand, 14495101 - 14495367
Alignment:
| Q |
182 |
gagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataaga |
281 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||| |||||||||||| ||| |||||||||| | ||| ||| || | || || || ||||| | |
|
|
| T |
14495101 |
gagaaagttgatgccttgaagaaatggggttggtcggatgaagatgttcttcaagcatttagaaagcagcctcactgtatgataacatccatcgataaaa |
14495200 |
T |
|
| Q |
282 |
ttaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttt-tagttatagtttggagaaaagga |
380 |
Q |
| |
|
||||||| ||||| || |||||||||||||| |||||||||||| | |||| |||| |||| ||| ||||||| | ||| |||||||| ||||||| |
|
|
| T |
14495201 |
ttaatttagtgatgagcttttgggtcaatcagttgggttgggatgctatggccattgccaaaacaccagatattttgtcatta-agtttggaaaaaagga |
14495299 |
T |
|
| Q |
381 |
tcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagctta |
448 |
Q |
| |
|
|||||||||||||| | ||| |||||| |||| | | || |||||| | || ||||||||||||||| |
|
|
| T |
14495300 |
tcattccaagggccactgttgtgcaatttcttctcaataatggtttgcgaaataagaatgcaagctta |
14495367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 176 - 448
Target Start/End: Complemental strand, 14475784 - 14475512
Alignment:
| Q |
176 |
tgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgt-tgttgacttcaatt |
274 |
Q |
| |
|
||||| |||||||| |||| ||||||||| ||||||||||||| |||||||||| | | |||||||||| | | ||| | |||| |||| || || ||| |
|
|
| T |
14475784 |
tgggaagagaaagtcgatgcctttaagaagtggggttggtctgctgaagatgttctacaagcatttagaaggcaacctca-ttgtatgttaacatccatt |
14475686 |
T |
|
| Q |
275 |
gataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggcca-catatttttagttatagtttggag |
373 |
Q |
| |
|
||||| |||||| | ||||| | |||||||||||||| |||||||||||| | | || ||||| ||| | ||| || ||||| ||| ||||| || |
|
|
| T |
14475685 |
gataaaattaatctagtgatgaacttttgggtcaatcagttgggttgggatgcacttgcccttgccaaaggaccatcagttttttcttta-agttttgaa |
14475587 |
T |
|
| Q |
374 |
aaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagctta |
448 |
Q |
| |
|
|| ||| || ||||||||||||| || |||||||||||| ||| |||||||||| | |||||||||||||||||| |
|
|
| T |
14475586 |
aagagggtccttccaagggcctctgtattgcaatatcttctgaagaaaggtttgcgaaaaaagaatgcaagctta |
14475512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 448
Target Start/End: Complemental strand, 14161796 - 14161620
Alignment:
| Q |
272 |
attgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagtttgg |
371 |
Q |
| |
|
|||||||| |||||||| |||| | |||||||||||||| |||||||||||| | |||| |||| ||| |||| || |||||| |||| | |
|
|
| T |
14161796 |
attgataaaattaatttactgatgaacttttgggtcaatcagttgggttgggatgctatggccattgccaaagtgccaagggttattagttgtagtctcc |
14161697 |
T |
|
| Q |
372 |
agaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagctta |
448 |
Q |
| |
|
|||||| ||||| || |||||||||||| ||||||||||| | | |||||||||| |||||||||||||||||||| |
|
|
| T |
14161696 |
agaaaactatcatacctagggcctcagttgtgcaatatcttctaaagaaaggtttgcggaaaaagaatgcaagctta |
14161620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 448
Target Start/End: Complemental strand, 14480966 - 14480700
Alignment:
| Q |
182 |
gagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataaga |
281 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||| |||| | || ||||| | |||| || || |||||||| |
|
|
| T |
14480966 |
gagaaagttgatgcctttaagaagtggggttggtctgatgaagatattatgaaagcgtttaaaaagcggcctgattctatgttaacatctattgataaag |
14480867 |
T |
|
| Q |
282 |
ttaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttt-tagttatagtttggagaaaagga |
380 |
Q |
| |
|
||||||| ||||| | |||||||||||||| |||||||||||| | |||| |||| |||| ||| ||||| | |||| |||||||| |||| | |
|
|
| T |
14480866 |
ttaatttagtgatgggcttttgggtcaatcagttgggttgggatgctatggccattgccaaaacaccattaattttgtcgtta-agtttggaaaaaacaa |
14480768 |
T |
|
| Q |
381 |
tcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagctta |
448 |
Q |
| |
|
||||||| |||||| ||| ||||||||||| ||| ||||||||||| || |||| |||||||||| |
|
|
| T |
14480767 |
tcattccgagggcccttgttgtgcaatatcttctgagtaaaggtttgagaaataagagtgcaagctta |
14480700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 325
Target Start/End: Original strand, 14502588 - 14502731
Alignment:
| Q |
182 |
gagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttagaggtcgtcctgacttgttgttgacttcaattgataaga |
281 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| |||||||||||| || |||||||| | | ||| ||| || | || || |||||||| | |
|
|
| T |
14502588 |
gagaaagttgatgcctttaagaagtggggttggtcggatgaagatgttcttgaagcatttaaaaagcagcctcactgtatgataacatccattgataaaa |
14502687 |
T |
|
| Q |
282 |
ttaatttggtgatcagtttttgggtcaatcaattgggttgggat |
325 |
Q |
| |
|
||||||| ||||| || |||||||||||||| |||||||||||| |
|
|
| T |
14502688 |
ttaatttagtgatgagcttttgggtcaatcagttgggttgggat |
14502731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 14168689 - 14168641
Alignment:
| Q |
175 |
ttgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaa |
223 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14168689 |
ttgggatgcgaaagttgttgtctttaagaaatggggttggtctgatgaa |
14168641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 14485645 - 14485693
Alignment:
| Q |
180 |
atgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgt |
228 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14485645 |
atgaaaaagttgatgtctttaagaaatggggatggtctgatgaagatgt |
14485693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 14158254 - 14158163
Alignment:
| Q |
357 |
ttagttatagtttggagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagctta |
448 |
Q |
| |
|
|||||| |||| | |||| ||| ||||| |||||| | | |||||||||||||||| ||| |||||||||| | |||||||||||||||||| |
|
|
| T |
14158254 |
ttagttctagtcttgagagaagtatcataccaaggacattagttttgcaatatcttctgaagaaaggtttgcgaaaaaagaatgcaagctta |
14158163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 14153301 - 14153345
Alignment:
| Q |
182 |
gagaaagttgatgtctttaagaaatggggttggtctgatgaagat |
226 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
14153301 |
gagaaagttgatgcttttaagaaatggggttggtctgaagaagat |
14153345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 448
Target Start/End: Original strand, 14521196 - 14521269
Alignment:
| Q |
375 |
aaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaagctta |
448 |
Q |
| |
|
|||||||||||||||| || | ||| |||||| |||| ||| ||||||||||| || ||||||||||||||| |
|
|
| T |
14521196 |
aaaggatcattccaagagcagctgttgtgcaatttcttctgaataaaggtttgagaaataagaatgcaagctta |
14521269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 14145320 - 14145364
Alignment:
| Q |
182 |
gagaaagttgatgtctttaagaaatggggttggtctgatgaagat |
226 |
Q |
| |
|
||||||||||||| | | |||||||||||||||||||| |||||| |
|
|
| T |
14145320 |
gagaaagttgatgccctaaagaaatggggttggtctgaagaagat |
14145364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 268 - 400
Target Start/End: Complemental strand, 38524834 - 38524702
Alignment:
| Q |
268 |
ttcaattgataagattaatttggtgatcagtttttgggtcaatcaattgggttgggattccttggcacttgctaaaaggccacatatttttagttatagt |
367 |
Q |
| |
|
|||||||||||||||| ||||| | || ||||||||||||||||||||||||||| |||||||| ||||| |||||| || ||||||||||||| | |
|
|
| T |
38524834 |
ttcaattgataagattgatttgttaatgagtttttgggtcaatcaattgggttggaattccttgacacttactaaaaatccgaatatttttagttacgct |
38524735 |
T |
|
| Q |
368 |
ttggagaaaaggatcattccaagggcctcagtt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
38524734 |
ttggagaaaaggatcattccaagggccttagtt |
38524702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 49553778 - 49553845
Alignment:
| Q |
176 |
tgggatgagaaagttgatgtctttaagaaatggggttggtctgatgaagatgttattcgagcatttag |
243 |
Q |
| |
|
|||| |||||||||||| | ||||||||||||||||||||||||||||| || ||| ||||||||| |
|
|
| T |
49553778 |
tgggctgagaaagttgaaatttttaagaaatggggttggtctgatgaagacattcttcaagcatttag |
49553845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 9809482 - 9809555
Alignment:
| Q |
371 |
gagaaaaggatcattccaagggcctcagttttgcaatatcttgtgatgaaaggtttgaggaaaaagaatgcaag |
444 |
Q |
| |
|
||||||| ||||| || ||||| |||||| ||||||||||| | | |||||||||| |||||||||||||||| |
|
|
| T |
9809482 |
gagaaaactatcatgcctagggcatcagttgtgcaatatcttctaaagaaaggtttgcggaaaaagaatgcaag |
9809555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 24741547 - 24741591
Alignment:
| Q |
182 |
gagaaagttgatgtctttaagaaatggggttggtctgatgaagat |
226 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
24741547 |
gagacagttgatgcctttaagaaatggggttggtttgatgaagat |
24741591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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