View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1715_low_53 (Length: 425)
Name: NF1715_low_53
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 1 - 395
Target Start/End: Complemental strand, 37821832 - 37821438
Alignment:
| Q |
1 |
tatgtaaagattccaggacttaacaagattctatacccaaccttgtattaagattttctatatctgtagctttaattttgcaggcaagtttaaattattt |
100 |
Q |
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| T |
37821832 |
tatgtaaagattccaggacttaacaagattctatacccaaccttgtattaagattttctatatctgtagctttaattttgcaggcaagtttaaattattt |
37821733 |
T |
|
| Q |
101 |
gatctggggctgcattataaaatgtgcaattgattgtgtgaagatgtcgttgaattggtgttgcatcttaacttctgtgcacttgagactgacattatgc |
200 |
Q |
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| T |
37821732 |
gatctggggctgcattataaaatgtgcaattgattgtgtgaagatgtcgttgaattggtgttgcatcttaacttctgtgcacttgagactgacattatgc |
37821633 |
T |
|
| Q |
201 |
atgttatacaacaactatctgtctgtacctagttactgcgtgtcaatttagttcagttggtgatttagcatgtgctataatactggccaaaactggccat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37821632 |
atgttatacaacaactatctgtctgtacctagttactgcgtgtcaatttagttcagttggtgatttagcatgtgctataatactggccaaaactggccat |
37821533 |
T |
|
| Q |
301 |
agtactgttctttatttgattattattttgataatgtaatgttttttaacggttgatactgtaatactattcatctcttacatatataattatca |
395 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37821532 |
agtactgttctttatttgattattattttgataatgtaatgttttttaacggttgatactgtaatactattcatctcttacatatataattatca |
37821438 |
T |
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