View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1715_low_55 (Length: 423)
Name: NF1715_low_55
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_low_55 |
 |  |
|
| [»] scaffold0067 (1 HSPs) |
 |  |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |  |
|
| [»] scaffold0017 (1 HSPs) |
 |  |  |
|
| [»] scaffold0011 (1 HSPs) |
 |  |  |
|
| [»] scaffold0108 (1 HSPs) |
 |  |  |
|
| [»] scaffold0091 (1 HSPs) |
 |  |  |
|
| [»] scaffold0070 (2 HSPs) |
 |  |  |
|
| [»] scaffold0060 (1 HSPs) |
 |  |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 98; Significance: 4e-48; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 28860312 - 28860207
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
28860312 |
aaggataagataatagaaactcttaatgagatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgtctatacgaatgt |
28860213 |
T |
 |
| Q |
402 |
ggaaca |
407 |
Q |
| |
|
|||||| |
|
|
| T |
28860212 |
ggaaca |
28860207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 4241564 - 4241668
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
4241564 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
4241663 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
4241664 |
ggaac |
4241668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 28860554 - 28860501
Alignment:
| Q |
109 |
ggaaatgttattttaacatagggacattatagtacttttaaatataaacatcac |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28860554 |
ggaaatgttattttaacatagggacattatagtacttttaaatataaacatcac |
28860501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 17021802 - 17021698
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||||||||| |||||||| | | ||||||||||||| |
|
|
| T |
17021802 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacatgagtaatcttgatagaaccacctatacgaatgt |
17021703 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
17021702 |
ggaac |
17021698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 17552239 - 17552135
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||||||||| |||||||| | | ||||||||||||| |
|
|
| T |
17552239 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacatgagtaatcttgatagaaccacctatacgaatgt |
17552140 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
17552139 |
ggaac |
17552135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 8329863 - 8329967
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||| |||||| | |||||||| ||| |||| || |||| |||||| |||||||||||| |||||| |||||| |
|
|
| T |
8329863 |
aaggatgaggtaatagaaactcttaatgaggtctatactctatgttgagtggggtacctagttacaagagtacccttgataaactcacctatatgaatgt |
8329962 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
8329963 |
ggaac |
8329967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 43325636 - 43325589
Alignment:
| Q |
111 |
aaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
43325636 |
aaatgttattttaacataggggcattatagtacttttaaatataaaca |
43325589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 19431221 - 19431117
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||| |||||||||||| || |||| | |||||||| ||| ||||||| ||||| |||||| |||||| |||| ||||||||||||| |
|
|
| T |
19431221 |
aaggatgagttaataacaactcttaatgagatttatactctatgttgactggggtacatagctacaggagtacctttgatagactcacctatacgaatgt |
19431122 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
19431121 |
ggaac |
19431117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 19567370 - 19567266
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||| |||||||||||| || |||| | |||||||| ||| ||||||| ||||| |||||| |||||| |||| ||||||||||||| |
|
|
| T |
19567370 |
aaggatgagttaataacaactcttaatgagatttatactctatgttgactggggtacatagctacaggagtacctttgatagactcacctatacgaatgt |
19567271 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
19567270 |
ggaac |
19567266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 405
Target Start/End: Original strand, 4540984 - 4541077
Alignment:
| Q |
312 |
taatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaa |
405 |
Q |
| |
|
||||| ||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||| | |||||||||| |
|
|
| T |
4540984 |
taatataaactcttaatgagatctatactctatgtggagtggagtacctagctacaagagtactcttgatagactcacctttgtgaatgtggaa |
4541077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 9636150 - 9636199
Alignment:
| Q |
109 |
ggaaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
9636150 |
ggaaatattattttaacataggggcattatagtacttttaaaaataaaca |
9636199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 21959993 - 21959889
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || |||||||||||| |||||| ||||||| | ||| |||| ||| |||| || |||| ||||| ||||||| |||| ||||||||||||| |
|
|
| T |
21959993 |
aaggatgaggtaatagaaactcgtaatgagatctatactctatattgagtggggtacctagttacaggagtatccttgatagactcacctatacgaatgt |
21959894 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
21959893 |
ggaac |
21959889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 9579250 - 9579299
Alignment:
| Q |
109 |
ggaaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
9579250 |
ggaaatgttattttaacataagggtattatggtacttttaaatataaaca |
9579299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 302 - 405
Target Start/End: Complemental strand, 13061001 - 13060898
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||| ||||| |
|
|
| T |
13061001 |
aaggatgagataatagaaactcttaatgagatctatactctatgttgagtggagtacatagctacaggagtactcttgataaactcacctatacaaatgt |
13060902 |
T |
 |
| Q |
402 |
ggaa |
405 |
Q |
| |
|
|||| |
|
|
| T |
13060901 |
ggaa |
13060898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 33467620 - 33467720
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | |||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
33467620 |
aaggatgagataatagaaactcttaatgagatctatactctatgttgagtggagcacatagctacaggagtactcttgatagactcacctatacgaatgt |
33467719 |
T |
 |
| Q |
402 |
g |
402 |
Q |
| |
|
| |
|
|
| T |
33467720 |
g |
33467720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 37263122 - 37263226
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
37263122 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
37263221 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
37263222 |
ggaac |
37263226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 406
Target Start/End: Complemental strand, 19103505 - 19103408
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| || |||| |||||| ||||| |||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
19103505 |
agataatagaaactcttaatgagatctatattctatgcggagtggaatacatagctacaggagtactcttgatagactcacctatacgaatgtggaac |
19103408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 7899439 - 7899543
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||| | |||||||| ||| |||| || |||| |||||| ||||||| |||| ||||||||||| | |
|
|
| T |
7899439 |
aaggatgaggtaatagaaactcttaatgaaatctatactctatgttgagtggggtacctagttacaggagtacccttgatagactcacctatacgaattt |
7899538 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
7899539 |
ggaac |
7899543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 8028889 - 8028993
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||| || |||||||||| | |||| | |||||||| ||||||||||| ||||||| |||||||||||| |||| ||||||||||||| |
|
|
| T |
8028889 |
aaggatgagataatataatctcttaatgagacctatcctctatgttgagtggagtacatagctacatgggtactcttgatagactcacctatacgaatgt |
8028988 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
|||| |
|
|
| T |
8028989 |
agaac |
8028993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 11671762 - 11671810
Alignment:
| Q |
110 |
gaaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
11671762 |
gaaatgttattttaacataggaacattatagtacttttaaatataaaca |
11671810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 405
Target Start/End: Complemental strand, 19907784 - 19907721
Alignment:
| Q |
342 |
tatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaa |
405 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
19907784 |
tatgttgagtggagtacatagctacatgagtactcttgatgaactcacctatacaaatgtggaa |
19907721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 406
Target Start/End: Complemental strand, 24491266 - 24491172
Alignment:
| Q |
312 |
taatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
||||||||||||||||| | ||||||| | |||||||| ||| ||||| | ||||| |||||| ||||||| |||| |||||| ||||||||||| |
|
|
| T |
24491266 |
taatagaaactcttaattagatctatactctatgttgagtggggtacaaagctacaagagtacccttgatagactcacctatatgaatgtggaac |
24491172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 17681662 - 17681759
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||| ||| | ||||||| ||||||| | |||||||| |||||||||| ||||||||||| |||||||| |||| || |||||||||| |||| |
|
|
| T |
17681662 |
agataatataaattgttaatgagatctatactttatgttgagtggagtacatggctacatgagtaatcttgatagactcaccaatacgaatgttgaac |
17681759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 12875858 - 12875782
Alignment:
| Q |
318 |
aaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctata |
394 |
Q |
| |
|
||||||||||||| ||||||| | ||| | || ||||||||||| ||||||| |||||||||||| |||| |||||| |
|
|
| T |
12875858 |
aaactcttaatgagatctatactctatatggagtggagtacatagctacatgcgtactcttgatagactcacctata |
12875782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 17681860 - 17681924
Alignment:
| Q |
342 |
tatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||| ||||||| |||||| | ||||||| |||||| |||| || ||||||||||||||| |
|
|
| T |
17681860 |
tatgttgagtggagtatgtaactagaggagtacttttgatagactcaccaatacgaatgtggaac |
17681924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 405
Target Start/End: Complemental strand, 12802816 - 12802714
Alignment:
| Q |
303 |
aggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtg |
402 |
Q |
| |
|
||||| ||||||||||||||||| |||| ||||||| | |||||||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
12802816 |
aggatgagataatagaaactcttcatgagatctatactctatgttgagtggagtacatagctacatgagtactcttgatagactcacctatacgaatgtg |
12802717 |
T |
 |
| Q |
403 |
gaa |
405 |
Q |
| |
|
||| |
|
|
| T |
12802716 |
gaa |
12802714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 10391653 - 10391757
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||| ||||||| || |||| | |||||||| ||||||||||| ||||| |||||||||||||| |||| ||||||| ||||| |
|
|
| T |
10391653 |
aaggatgagataatagaaacttttaatgagatatatactctatgttgagtggagtacatagctacaggagtactcttgatagactcacctataccaatgt |
10391752 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
10391753 |
ggaac |
10391757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 405
Target Start/End: Complemental strand, 2596305 - 2596202
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||| | |||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||||| |
|
|
| T |
2596305 |
aaggatgaaataatagaaactcttaatgagatctatactctatgttgagtggagtacataggtacaggagtactcttgttagactcacctatacgaatgt |
2596206 |
T |
 |
| Q |
402 |
ggaa |
405 |
Q |
| |
|
|||| |
|
|
| T |
2596205 |
ggaa |
2596202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 404
Target Start/End: Complemental strand, 15975404 - 15975303
Alignment:
| Q |
303 |
aggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtg |
402 |
Q |
| |
|
||||| |||||||||||||||||||| | || |||| | ||| | || || |||||||| |||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
15975404 |
aggatgagataatagaaactcttaataagatatatactctatttggagtgaagtacatagctacatgagtactcttgatagactcgcctatacgaatatg |
15975305 |
T |
 |
| Q |
403 |
ga |
404 |
Q |
| |
|
|| |
|
|
| T |
15975304 |
ga |
15975303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 406
Target Start/End: Complemental strand, 14784044 - 14783946
Alignment:
| Q |
308 |
aagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
||||||||||||||||||||||| |||| || || || | | ||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
14784044 |
aagataatagaaactcttaatgagatctgtaatgcatatgaagtggagtacaaatctacatgagtactcttgatagactcatctatacgaatgtggaac |
14783946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 406
Target Start/End: Complemental strand, 15234077 - 15233979
Alignment:
| Q |
308 |
aagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||| |||||||||||| ||||||| || || | | ||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
15234077 |
aagataataggaactcttaatgagatctataatgcatatgaagtggagtacaaatctacatgagtactcttgatagactcatctatacgaatgtggaac |
15233979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 7018152 - 7018247
Alignment:
| Q |
311 |
ataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
||||||| |||||||||||| ||||||| | |||||||| | | ||||||| ||||| |||||||||||||| | || ||||||||||||||||| |
|
|
| T |
7018152 |
ataatagcaactcttaatgagatctatactctatgttgagtagggtacatagctacaggagtactcttgatagattcatctatacgaatgtggaac |
7018247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 7033510 - 7033605
Alignment:
| Q |
311 |
ataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
||||||| |||||||||||| ||||||| | |||||||| | | ||||||| ||||| |||||||||||||| | || ||||||||||||||||| |
|
|
| T |
7033510 |
ataatagcaactcttaatgagatctatactctatgttgagtagggtacatagctacaggagtactcttgatagattcatctatacgaatgtggaac |
7033605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 44630049 - 44630146
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | ||||| || ||||||||||||||| | |||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
44630049 |
agataatagaaactcttaatgagatctatactctatgtggagtggagtacataactaaaggagtactcttgatagactcgcctatacaaatgtggaac |
44630146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 9183976 - 9184080
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
9183976 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
9184075 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
9184076 |
ggaac |
9184080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 17973909 - 17974013
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
17973909 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
17974008 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
17974009 |
ggaac |
17974013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 25483336 - 25483433
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | || || || ||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||| |
|
|
| T |
25483336 |
agataatagaaactcttaatgagatctatactctacgtggagtggagtacatagctacatgagcactcttgatatactcacctatacgaatgtggaac |
25483433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 25490942 - 25491039
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | || || || ||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||| |
|
|
| T |
25490942 |
agataatagaaactcttaatgagatctatactctacgtggagtggagtacatagctacatgagcactcttgatatactcacctatacgaatgtggaac |
25491039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 30652451 - 30652347
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||| ||||||| |
|
|
| T |
30652451 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatgcgaatgt |
30652352 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
30652351 |
ggaac |
30652347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 24536578 - 24536681
Alignment:
| Q |
303 |
aggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtg |
402 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||| | |||||||| ||||||||||| || || |||||||||||||| | || |||||||||||||| |
|
|
| T |
24536578 |
aggatgagataatagaaaatcttaatgagatctatactctatgttgagtggagtacatagctgcaggagtactcttgatatattcacctatacgaatgtg |
24536677 |
T |
 |
| Q |
403 |
gaac |
406 |
Q |
| |
|
|||| |
|
|
| T |
24536678 |
gaac |
24536681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 11738734 - 11738686
Alignment:
| Q |
110 |
gaaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11738734 |
gaaatgttattttaacatagggacattatagtacttttaaatataaaca |
11738686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 399
Target Start/End: Original strand, 13290241 - 13290337
Alignment:
| Q |
303 |
aggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaat |
399 |
Q |
| |
|
||||| ||||||||| |||||||||||| || ||| | ||||| || ||||||||||| || || |||||||||||||| |||| | ||||||||| |
|
|
| T |
13290241 |
aggatgagataataggaactcttaatgaggtcgatactttatgtggagtggagtacatagctgcaagagtactcttgatagactcacttatacgaat |
13290337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 15445852 - 15445955
Alignment:
| Q |
303 |
aggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtg |
402 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||| | ||||| || ||||||||||| ||||| || | ||||||||| |||| | ||||||||||| |
|
|
| T |
15445852 |
aggatgagataattaaaactcttaatgtgatctataatctatgtggagtggagtacatagctacaagatttctcttgatagactcccaaatacgaatgtg |
15445951 |
T |
 |
| Q |
403 |
gaac |
406 |
Q |
| |
|
|||| |
|
|
| T |
15445952 |
gaac |
15445955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 14912890 - 14912986
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||| ||||||||||||| || |||| | |||||||| ||| ||||||| |||| |||||| |||||| | | ||||||||||||||||||| |
|
|
| T |
14912890 |
agataataaaaactcttaatgagatatatactctatgttgagtggggtacatagctacgcgagtacccttgat-gatttgcctatacgaatgtggaac |
14912986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 19992967 - 19993067
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | |||||||| ||||||||||| |||||||| ||||||||| | |||| ||||||||||||| |
|
|
| T |
19992967 |
aaggatgagataatagaaactcttaatgagatctatactatatgttgagtggagtacatagctacatgattactcttgaaagactcacctatacgaatgt |
19993066 |
T |
 |
| Q |
402 |
g |
402 |
Q |
| |
|
| |
|
|
| T |
19993067 |
g |
19993067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 16834720 - 16834820
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||| ||||||| |||| ||||| ||||||| |
|
|
| T |
16834720 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtacccttgatagactcacctatgcgaatgt |
16834819 |
T |
 |
| Q |
402 |
g |
402 |
Q |
| |
|
| |
|
|
| T |
16834820 |
g |
16834820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 10486283 - 10486179
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||| |||||||||||| ||||||| | |||||||| ||| ||||||| ||||| |||||| ||||||| |||| ||||||||||||| |
|
|
| T |
10486283 |
aaggatgagttaataacaactcttaatgagatctatactctatgttgagtggggtacatagctacaggagtacccttgatagactcacctatacgaatgt |
10486184 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
|||| |
|
|
| T |
10486183 |
agaac |
10486179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 406
Target Start/End: Original strand, 22694012 - 22694108
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatg-agtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | ||||| || ||| ||||||| ||||| | |||||||||| |||||||||||||||||||| |||| |
|
|
| T |
22694012 |
agataatagaaactcttaatgagatctatactctatgtggagtggggtacatagctacacgaagtactcttg--aaactcgcctatacgaatgtcgaac |
22694108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 19479324 - 19479220
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || |||||| |||||||||||| ||||||| | |||||||| | | ||||||| ||||| || ||| |||||| |||| ||||||||||||| |
|
|
| T |
19479324 |
aaggatgagttaatagcaactcttaatgagatctatactctatgttgagtagggtacatagctacaggaatacctttgatagactcacctatacgaatgt |
19479225 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
19479224 |
ggaac |
19479220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 17289229 - 17289318
Alignment:
| Q |
319 |
aactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaacat |
408 |
Q |
| |
|
|||||||||||| || |||| | |||||||| ||| ||||||| |||||||| ||| ||||||| |||| ||||| ||| |||||||||| |
|
|
| T |
17289229 |
aactcttaatgagatatatactctatgttgagtggggtacatagctacatgaatacccttgatagactcacctatccgattgtggaacat |
17289318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 558306 - 558202
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
558306 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
558207 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
558206 |
ggaac |
558202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 36425175 - 36425071
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
36425175 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
36425076 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
36425075 |
ggaac |
36425071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 36940748 - 36940852
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
36940748 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
36940847 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
36940848 |
ggaac |
36940852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 41998252 - 41998148
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
41998252 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
41998153 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
41998152 |
ggaac |
41998148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 26668814 - 26668711
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| | ||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
26668814 |
aaggatgagataatagaaactcttaatgaga-ctatactctatgtggagtggagtacctagctacaggagtactcttgatatactcacctatacgaatgt |
26668716 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
26668715 |
ggaac |
26668711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 26940411 - 26940308
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| | ||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
26940411 |
aaggatgagataatagaaactcttaatgaga-ctatactctatgtggagtggagtacctagctacaggagtactcttgatatactcacctatacgaatgt |
26940313 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
26940312 |
ggaac |
26940308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 39519922 - 39519818
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||| || | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||| ||||||| |
|
|
| T |
39519922 |
aaggatgagataatagaaactcttaatgagatctctactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatgcgaatgt |
39519823 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
39519822 |
ggaac |
39519818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 406
Target Start/End: Original strand, 17550056 - 17550154
Alignment:
| Q |
308 |
aagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||| |||||||||||| ||||||| || || | | ||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
17550056 |
aagataataggaactcttaatgagatctataatgcatatgaagtggagtacaaatctacatgagtactcttgatagactcatctatacgaatgtggaac |
17550154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 8224007 - 8223960
Alignment:
| Q |
111 |
aaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8224007 |
aaatgttattttaacatagggatattatagtacttttaaatataaaca |
8223960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 25688156 - 25688260
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| | ||||| |||||||||||||| |||||||| ||| | | ||||||||||| ||| |||||||||||| ||| |||| | |||| |||||| |
|
|
| T |
25688156 |
aaggatgaaataatggaaactcttaatgaggtctatattctatatgaagtggagtacatagctaaatgagtactcttaatagactcacttatatgaatgt |
25688255 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
25688256 |
ggaac |
25688260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 41318897 - 41318974
Alignment:
| Q |
310 |
gataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactc |
387 |
Q |
| |
|
||||||||||||||||||||| ||||||| | ||||| || || |||| || ||||| |||||||||||||| |||| |
|
|
| T |
41318897 |
gataatagaaactcttaatgagatctatactctatgtggagtgtagtatctagctacaagagtactcttgatagactc |
41318974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 3674176 - 3674072
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
3674176 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
3674077 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
3674076 |
ggaac |
3674072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 18468749 - 18468645
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
18468749 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
18468650 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
18468649 |
ggaac |
18468645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 12970369 - 12970472
Alignment:
| Q |
303 |
aggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtg |
402 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| | ||| ||| ||||||||||| ||||||||||||| ||||| |||| |||||||||||||| |
|
|
| T |
12970369 |
aggataagataatagaaactcttaatgagatctatactctataatgagtggagtacatagctacatgagtactattgatggactcacctatacgaatgtg |
12970468 |
T |
 |
| Q |
403 |
gaac |
406 |
Q |
| |
|
|||| |
|
|
| T |
12970469 |
gaac |
12970472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 8884780 - 8884676
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | || || || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
8884780 |
aaggatgagataatagaaactcttaatgagatctatactctacgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
8884681 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
8884680 |
ggaac |
8884676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 23664680 - 23664784
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||| ||||||| |
|
|
| T |
23664680 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatgcgaatgt |
23664779 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
23664780 |
ggaac |
23664784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 18370940 - 18370989
Alignment:
| Q |
109 |
ggaaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
18370940 |
ggaaatgttattttaacataggggcattatagtacttttaaaaataaaca |
18370989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 405
Target Start/End: Original strand, 16452890 - 16452983
Alignment:
| Q |
312 |
taatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaa |
405 |
Q |
| |
|
||||| ||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||| | |||||||||| |
|
|
| T |
16452890 |
taatataaactcttaatgagatctatactctatgtggagtggagtacctagctacaagagtactcttgatagactcacctttgtgaatgtggaa |
16452983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 5e-26; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 10136862 - 10136758
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
10136862 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatacgaatgt |
10136763 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
10136762 |
ggaac |
10136758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 25845293 - 25845189
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| | ||||| || |||||||| || ||||| |||||||||||||| |||| ||||| ||||||| |
|
|
| T |
25845293 |
aaggatgagataatagaaactcttaatgagatctatactctatgtggagtggagtacctagctacaggagtactcttgatagactcacctatgcgaatgt |
25845194 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
25845193 |
ggaac |
25845189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 27306973 - 27307068
Alignment:
| Q |
313 |
aatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaacat |
408 |
Q |
| |
|
|||||||||||||||||| || |||| | ||| || ||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
27306973 |
aatagaaactcttaatgagatttatagtatataaggagtggagtagatagctacatgagtactctttatagactcgcctatacgaatgtggaacat |
27307068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 30196161 - 30196208
Alignment:
| Q |
111 |
aaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30196161 |
aaatgttattttaacatagggacattatagtacttttaaatataaaca |
30196208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 406
Target Start/End: Complemental strand, 16037144 - 16037047
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||| ||||||||||||||||| | |||| | ||||| || |||||||||| ||||||| |||| |||||||| |||| |||||||||||||||||| |
|
|
| T |
16037144 |
agatgatagaaactcttaatgaggtatatactctatgtggagtggagtacatgactacattagtattcttgatagactcacctatacgaatgtggaac |
16037047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 399
Target Start/End: Complemental strand, 11807734 - 11807637
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaat |
399 |
Q |
| |
|
|||||| |||||||||||||| ||||||| ||||||| | |||||| | |||| |||||| ||||| |||||||||||||| ||| || |||||||| |
|
|
| T |
11807734 |
aaggatgagataatagaaacttttaatgagatctatactttatgttaagtggattacatagctacaggagtactcttgatagactgaccgatacgaat |
11807637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 52860507 - 52860552
Alignment:
| Q |
111 |
aaatgttattttaacatagggacattatagtacttttaaatataaa |
156 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
52860507 |
aaatgttattttaacatagggacgttatagtacttttaaatataaa |
52860552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 41862242 - 41862297
Alignment:
| Q |
351 |
tggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
41862242 |
tggagtacctaactacatgagtactcttgataaactcacctatgtgaatatggaac |
41862297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 32915 - 33019
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| ||| ||||| |||||||||||| || |||| | |||||||| |||| | |||||||||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
32915 |
aaggatgagagaatagcaactcttaatgagatttatactctatgttgagtggattgcataactacaggagtactcttgatagactctcctatacgaatgt |
33014 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
33015 |
ggaac |
33019 |
T |
 |
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Target: scaffold0061 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 48442 - 48546
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||| ||||||| | |||||||| ||| |||| || |||| |||||| ||||||| |||| ||||||||||||| |
|
|
| T |
48442 |
aaggatgaggtaatagaaactcttaatgagatctatactctatgttgagtggggtacctagttacaggagtacccttgatagactcacctatacgaatgt |
48541 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
48542 |
ggaac |
48546 |
T |
 |
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Target: scaffold0017 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 150191 - 150087
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||| ||||||| | |||||||| ||| |||| || |||| |||||| ||||||| |||| ||||||||||||| |
|
|
| T |
150191 |
aaggatgaggtaatagaaactcttaatgagatctatactctatgttgagtggggtacctagttacaggagtacccttgatagactcacctatacgaatgt |
150092 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
150091 |
ggaac |
150087 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 2814 - 2710
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||| |||||| |||||| |||| ||||||| ||||| |
|
|
| T |
2814 |
aaggatgagttaatagaaactcttaatgagatctatacactatgttgagtggggtacataactacaggagtacctttgatagactcacctatacaaatgt |
2715 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
2714 |
ggaac |
2710 |
T |
 |
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Target: scaffold0108 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 406
Target Start/End: Complemental strand, 21338 - 21241
Alignment:
| Q |
309 |
agataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
|||||||||||||||||||||| || |||| | ||||| || ||||||||||| || | ||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
21338 |
agataatagaaactcttaatgagatttatactctatgtggagtggagtacatagttatagaagtactcttgatagactcacctatacgaatgtggaac |
21241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 15428 - 15477
Alignment:
| Q |
109 |
ggaaatgttattttaacatagggacattatagtacttttaaatataaaca |
158 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15428 |
ggaaatgttattttaacatagggacattatagtacttttaaatctaaaca |
15477 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 60016 - 59912
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||| ||||||| | |||||||| ||| |||| || |||| || ||| ||||||| |||| ||||||||||||| |
|
|
| T |
60016 |
aaggatgaggtaatagaaactcttaatgagatctatactctatgttgagtggggtacctagttacaggattacccttgatagactcacctatacgaatgt |
59917 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
59916 |
ggaac |
59912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 64218 - 64114
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || ||||||||||||||||||| ||||||| | |||||||| ||| |||| || |||| || ||| ||||||| |||| ||||||||||||| |
|
|
| T |
64218 |
aaggatgaggtaatagaaactcttaatgagatctatactctatgttgagtggggtacctagttacaggattacccttgatagactcacctatacgaatgt |
64119 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
64118 |
ggaac |
64114 |
T |
 |
Back To:
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Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 406
Target Start/End: Original strand, 51407 - 51501
Alignment:
| Q |
312 |
taatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgtggaac |
406 |
Q |
| |
|
||||| ||||||||||||| ||||||| | |||||||| ||| |||| || |||| |||||| ||||||| |||| |||||||||||||||||| |
|
|
| T |
51407 |
taatataaactcttaatgagatctatactctatgttgagtggggtacctagttacaggagtacccttgatagactcacctatacgaatgtggaac |
51501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 212855 - 212959
Alignment:
| Q |
302 |
aaggataagataatagaaactcttaatgaaatctatattgtatgttgaatggagtacataactacatgagtactcttgataaactcgcctatacgaatgt |
401 |
Q |
| |
|
|||||| || |||||||||||| |||||| ||||||| | ||| |||| ||| |||| || |||| ||||| ||||||| |||| ||||||||||||| |
|
|
| T |
212855 |
aaggatgaggtaatagaaactcgtaatgagatctatactctatattgagtggggtacctagttacaggagtatccttgatagactcacctatacgaatgt |
212954 |
T |
 |
| Q |
402 |
ggaac |
406 |
Q |
| |
|
||||| |
|
|
| T |
212955 |
ggaac |
212959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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