View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1715_low_6 (Length: 637)

Name: NF1715_low_6
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1715_low_6
NF1715_low_6
[»] chr3 (51 HSPs)
chr3 (19-626)||(44591980-44592591)
chr3 (501-608)||(51017788-51017895)
chr3 (499-605)||(40160736-40160843)
chr3 (509-599)||(23237369-23237460)
chr3 (488-605)||(24160503-24160622)
chr3 (489-605)||(24130560-24130678)
chr3 (499-591)||(6054212-6054305)
chr3 (499-605)||(4010005-4010112)
chr3 (499-599)||(21248977-21249077)
chr3 (509-605)||(28951867-28951964)
chr3 (503-599)||(32080062-32080159)
chr3 (499-599)||(43774191-43774291)
chr3 (560-605)||(16874239-16874284)
chr3 (517-605)||(42665930-42666019)
chr3 (499-605)||(47191373-47191479)
chr3 (489-599)||(51493604-51493717)
chr3 (565-605)||(30745785-30745825)
chr3 (502-605)||(34407080-34407184)
chr3 (509-595)||(4045631-4045718)
chr3 (499-605)||(4478355-4478462)
chr3 (559-614)||(12236591-12236646)
chr3 (499-589)||(27119293-27119384)
chr3 (565-599)||(12143461-12143495)
chr3 (498-607)||(36842161-36842271)
chr3 (567-613)||(38507641-38507687)
chr3 (499-609)||(43911611-43911714)
chr3 (560-605)||(3973303-3973348)
chr3 (560-605)||(3996528-3996573)
chr3 (526-605)||(14868685-14868766)
chr3 (560-605)||(19137620-19137665)
chr3 (499-605)||(36331715-36331821)
chr3 (504-604)||(794001-794101)
chr3 (489-605)||(3461699-3461818)
chr3 (488-535)||(38571397-38571445)
chr3 (543-595)||(51412022-51412074)
chr3 (555-605)||(6951834-6951884)
chr3 (566-608)||(23305744-23305786)
chr3 (560-605)||(3993756-3993801)
chr3 (526-605)||(9624983-9625064)
chr3 (526-605)||(27183695-27183776)
chr3 (490-538)||(49299217-49299266)
chr3 (499-610)||(49639024-49639134)
chr3 (512-593)||(53670329-53670409)
chr3 (499-605)||(7020775-7020883)
chr3 (523-610)||(16277962-16278050)
chr3 (509-537)||(17262289-17262317)
chr3 (525-580)||(28962990-28963046)
chr3 (566-610)||(31917922-31917966)
chr3 (569-613)||(46416281-46416325)
chr3 (490-537)||(47497148-47497196)
chr3 (517-601)||(48894104-48894188)
[»] chr1 (54 HSPs)
chr1 (499-605)||(9768796-9768903)
chr1 (488-605)||(18003817-18003935)
chr1 (499-599)||(3341723-3341824)
chr1 (499-596)||(2903014-2903112)
chr1 (502-605)||(48260179-48260283)
chr1 (499-605)||(41677061-41677168)
chr1 (499-596)||(50199463-50199561)
chr1 (498-606)||(9769566-9769675)
chr1 (499-613)||(47645789-47645898)
chr1 (503-605)||(11238019-11238122)
chr1 (499-605)||(42908772-42908879)
chr1 (503-605)||(1721141-1721244)
chr1 (499-605)||(18179329-18179436)
chr1 (499-605)||(43020612-43020719)
chr1 (499-598)||(12553201-12553302)
chr1 (511-605)||(52961081-52961176)
chr1 (489-605)||(195045-195163)
chr1 (499-596)||(4511512-4511610)
chr1 (499-604)||(23750152-23750258)
chr1 (489-537)||(33844687-33844736)
chr1 (489-537)||(33949242-33949291)
chr1 (543-596)||(47141838-47141891)
chr1 (503-599)||(50575908-50576005)
chr1 (526-612)||(47763399-47763487)
chr1 (498-611)||(7015672-7015787)
chr1 (556-605)||(9527426-9527476)
chr1 (566-599)||(5862135-5862168)
chr1 (489-537)||(19866545-19866594)
chr1 (526-605)||(29491470-29491551)
chr1 (498-580)||(11405482-11405563)
chr1 (499-605)||(7906313-7906420)
chr1 (521-614)||(18234336-18234428)
chr1 (527-605)||(43327011-43327090)
chr1 (566-605)||(49632294-49632333)
chr1 (489-605)||(9931088-9931206)
chr1 (499-537)||(9976371-9976409)
chr1 (489-534)||(27684647-27684693)
chr1 (560-614)||(33176152-33176206)
chr1 (488-533)||(35424214-35424260)
chr1 (566-595)||(3569055-3569084)
chr1 (489-537)||(23973458-23973507)
chr1 (504-537)||(27654997-27655030)
chr1 (526-605)||(38021252-38021333)
chr1 (509-593)||(38028550-38028635)
chr1 (490-605)||(52765707-52765824)
chr1 (490-537)||(3797925-3797972)
chr1 (498-605)||(4288589-4288697)
chr1 (499-605)||(4429471-4429576)
chr1 (559-599)||(5684129-5684169)
chr1 (565-605)||(9004347-9004387)
chr1 (493-580)||(31965538-31965626)
chr1 (548-592)||(34870318-34870362)
chr1 (565-605)||(37262159-37262199)
chr1 (565-604)||(47939252-47939292)
[»] chr6 (32 HSPs)
chr6 (488-605)||(34524876-34524994)
chr6 (502-614)||(30833009-30833122)
chr6 (491-605)||(30668162-30668278)
chr6 (489-609)||(4844140-4844262)
chr6 (489-605)||(26669635-26669753)
chr6 (498-594)||(19680234-19680331)
chr6 (499-610)||(35190759-35190869)
chr6 (565-609)||(8309161-8309205)
chr6 (499-615)||(10455733-10455851)
chr6 (499-605)||(14949006-14949114)
chr6 (517-591)||(7374055-7374130)
chr6 (556-605)||(2945596-2945646)
chr6 (565-599)||(9031773-9031807)
chr6 (498-610)||(9422829-9422943)
chr6 (497-605)||(22730686-22730796)
chr6 (499-610)||(12089093-12089203)
chr6 (559-596)||(20858431-20858468)
chr6 (500-536)||(1395578-1395614)
chr6 (509-596)||(1488098-1488186)
chr6 (517-597)||(8253596-8253676)
chr6 (499-605)||(12127898-12128003)
chr6 (502-537)||(7234035-7234070)
chr6 (509-605)||(8175997-8176095)
chr6 (565-599)||(17176156-17176190)
chr6 (499-537)||(32372514-32372552)
chr6 (509-604)||(20149976-20150073)
chr6 (509-604)||(22182759-22182856)
chr6 (517-605)||(31639142-31639231)
chr6 (567-599)||(6219361-6219393)
chr6 (560-615)||(14981751-14981807)
chr6 (556-596)||(17347265-17347305)
chr6 (565-605)||(19135930-19135970)
[»] chr5 (46 HSPs)
chr5 (499-605)||(11246481-11246588)
chr5 (499-609)||(38040263-38040373)
chr5 (499-599)||(31556825-31556926)
chr5 (503-614)||(27006332-27006444)
chr5 (490-612)||(31280357-31280480)
chr5 (499-600)||(37986854-37986956)
chr5 (499-595)||(28768608-28768705)
chr5 (489-597)||(20186875-20186983)
chr5 (499-605)||(3535923-3536030)
chr5 (489-597)||(34325274-34325384)
chr5 (509-605)||(42553138-42553234)
chr5 (502-605)||(41405078-41405182)
chr5 (543-599)||(42781626-42781682)
chr5 (543-609)||(9408982-9409049)
chr5 (499-605)||(13862126-13862232)
chr5 (499-610)||(18872517-18872625)
chr5 (499-605)||(28537136-28537243)
chr5 (502-605)||(6806632-6806735)
chr5 (499-599)||(42455383-42455482)
chr5 (517-605)||(17557031-17557119)
chr5 (560-605)||(25660913-25660958)
chr5 (499-610)||(32158403-32158513)
chr5 (560-605)||(35813291-35813336)
chr5 (517-605)||(40250182-40250271)
chr5 (502-605)||(7147009-7147113)
chr5 (499-578)||(38129000-38129080)
chr5 (488-601)||(8018591-8018706)
chr5 (502-604)||(10106632-10106735)
chr5 (499-581)||(17137854-17137937)
chr5 (517-595)||(31907662-31907741)
chr5 (498-537)||(40384321-40384360)
chr5 (504-609)||(19608610-19608716)
chr5 (499-537)||(22687868-22687906)
chr5 (556-610)||(36742012-36742066)
chr5 (526-605)||(1463871-1463952)
chr5 (539-599)||(3102155-3102216)
chr5 (526-605)||(4674829-4674910)
chr5 (559-599)||(9963422-9963463)
chr5 (488-536)||(18535985-18536034)
chr5 (560-612)||(37417178-37417231)
chr5 (499-606)||(41539316-41539422)
chr5 (498-582)||(42260706-42260791)
chr5 (567-599)||(17178278-17178310)
chr5 (499-605)||(29096297-29096402)
chr5 (567-599)||(31280602-31280634)
chr5 (509-537)||(39955071-39955099)
[»] chr4 (51 HSPs)
chr4 (499-605)||(20610740-20610847)
chr4 (491-596)||(12585537-12585644)
chr4 (499-605)||(49039432-49039539)
chr4 (489-605)||(54854155-54854273)
chr4 (499-605)||(49319394-49319502)
chr4 (499-612)||(33076526-33076637)
chr4 (499-605)||(41492486-41492592)
chr4 (489-593)||(23226681-23226787)
chr4 (502-605)||(24039889-24039989)
chr4 (498-605)||(36008275-36008382)
chr4 (499-605)||(33359818-33359925)
chr4 (499-612)||(27921890-27922004)
chr4 (517-605)||(56865-56954)
chr4 (499-599)||(21023339-21023439)
chr4 (489-604)||(35230271-35230388)
chr4 (489-604)||(49743364-49743481)
chr4 (498-605)||(1589144-1589251)
chr4 (539-605)||(2565261-2565328)
chr4 (499-605)||(42758151-42758257)
chr4 (500-610)||(54264924-54265035)
chr4 (517-596)||(18740921-18741002)
chr4 (556-608)||(9084756-9084809)
chr4 (560-605)||(20166317-20166362)
chr4 (489-605)||(4419662-4419780)
chr4 (499-609)||(21664076-21664186)
chr4 (499-609)||(21672840-21672950)
chr4 (499-605)||(12820394-12820500)
chr4 (499-612)||(31480264-31480377)
chr4 (565-597)||(38657549-38657581)
chr4 (499-598)||(51077875-51077974)
chr4 (556-615)||(52031197-52031257)
chr4 (499-605)||(15185079-15185186)
chr4 (526-615)||(28520745-28520836)
chr4 (565-596)||(42432018-42432049)
chr4 (579-613)||(31852345-31852379)
chr4 (559-605)||(36045831-36045877)
chr4 (560-605)||(48512199-48512245)
chr4 (506-599)||(52556669-52556763)
chr4 (536-610)||(55266460-55266534)
chr4 (499-536)||(4153245-4153282)
chr4 (526-605)||(8690214-8690295)
chr4 (565-606)||(17431377-17431418)
chr4 (499-610)||(20753114-20753224)
chr4 (517-605)||(29785151-29785240)
chr4 (498-605)||(32885689-32885795)
chr4 (565-610)||(43049987-43050032)
chr4 (566-615)||(44449522-44449571)
chr4 (499-605)||(17859779-17859884)
chr4 (501-612)||(32887125-32887237)
chr4 (499-605)||(36257695-36257800)
chr4 (569-613)||(40261177-40261221)
[»] chr8 (38 HSPs)
chr8 (488-612)||(220337-220463)
chr8 (488-612)||(689492-689618)
chr8 (488-612)||(733960-734086)
chr8 (488-612)||(857856-857982)
chr8 (510-612)||(216145-216248)
chr8 (510-612)||(692705-692808)
chr8 (510-612)||(696914-697017)
chr8 (510-612)||(729768-729871)
chr8 (510-612)||(853663-853766)
chr8 (499-605)||(14011025-14011132)
chr8 (500-593)||(22847250-22847344)
chr8 (512-605)||(18577114-18577208)
chr8 (509-593)||(26773699-26773784)
chr8 (505-605)||(28979027-28979128)
chr8 (509-612)||(7345422-7345526)
chr8 (489-605)||(26657857-26657975)
chr8 (489-608)||(12560030-12560150)
chr8 (499-587)||(44254299-44254388)
chr8 (548-599)||(32940351-32940402)
chr8 (559-605)||(39432376-39432422)
chr8 (498-599)||(11900573-11900674)
chr8 (559-612)||(16808409-16808462)
chr8 (548-605)||(29937211-29937268)
chr8 (518-574)||(574257-574313)
chr8 (499-592)||(30542777-30542870)
chr8 (489-536)||(39208845-39208893)
chr8 (509-575)||(19925096-19925163)
chr8 (499-605)||(25470833-25470940)
chr8 (499-537)||(6325339-6325377)
chr8 (498-605)||(14012612-14012719)
chr8 (499-599)||(17987438-17987537)
chr8 (498-536)||(27821891-27821929)
chr8 (526-605)||(2800019-2800100)
chr8 (499-610)||(43468694-43468804)
chr8 (498-593)||(30500481-30500576)
chr8 (556-599)||(35301208-35301252)
chr8 (567-599)||(36593201-36593233)
chr8 (560-608)||(39208910-39208958)
[»] chr7 (50 HSPs)
chr7 (499-599)||(10020456-10020557)
chr7 (489-605)||(7392282-7392400)
chr7 (498-599)||(35195850-35195952)
chr7 (489-610)||(11808034-11808158)
chr7 (499-605)||(44409202-44409308)
chr7 (509-605)||(41012577-41012675)
chr7 (511-598)||(9351042-9351130)
chr7 (490-592)||(32309125-32309229)
chr7 (488-605)||(32814828-32814947)
chr7 (489-605)||(43635589-43635707)
chr7 (499-605)||(21285342-21285448)
chr7 (499-605)||(1649153-1649260)
chr7 (509-591)||(7162665-7162748)
chr7 (526-599)||(20527443-20527518)
chr7 (498-612)||(38328553-38328667)
chr7 (498-607)||(43712299-43712409)
chr7 (499-595)||(1513498-1513594)
chr7 (565-605)||(17305444-17305484)
chr7 (509-599)||(16814704-16814795)
chr7 (499-537)||(26734258-26734296)
chr7 (499-596)||(35498408-35498505)
chr7 (502-599)||(48174974-48175071)
chr7 (543-612)||(7465460-7465529)
chr7 (513-609)||(21877673-21877769)
chr7 (499-605)||(29658261-29658367)
chr7 (556-609)||(32534630-32534683)
chr7 (499-605)||(38451863-38451969)
chr7 (526-605)||(41139087-41139168)
chr7 (499-586)||(5773149-5773239)
chr7 (565-605)||(8147240-8147280)
chr7 (500-599)||(19924774-19924874)
chr7 (556-596)||(23799310-23799350)
chr7 (490-537)||(24579263-24579311)
chr7 (509-605)||(25304179-25304275)
chr7 (566-605)||(3246541-3246580)
chr7 (514-596)||(24427373-24427456)
chr7 (558-605)||(37410528-37410575)
chr7 (499-608)||(46716331-46716439)
chr7 (556-605)||(14818410-14818460)
chr7 (556-605)||(15265408-15265458)
chr7 (498-610)||(25818282-25818393)
chr7 (509-546)||(28968680-28968718)
chr7 (498-579)||(41853511-41853593)
chr7 (554-596)||(43209411-43209453)
chr7 (498-605)||(30152742-30152848)
chr7 (560-612)||(31475889-31475942)
chr7 (567-596)||(38032911-38032940)
chr7 (518-605)||(10474518-10474606)
chr7 (517-612)||(14772341-14772436)
chr7 (517-612)||(15222793-15222888)
[»] chr2 (48 HSPs)
chr2 (499-605)||(1244570-1244677)
chr2 (498-597)||(14307680-14307780)
chr2 (497-599)||(44487752-44487855)
chr2 (499-599)||(12206505-12206606)
chr2 (489-612)||(39334857-39334982)
chr2 (499-605)||(39118394-39118501)
chr2 (498-583)||(4529749-4529835)
chr2 (499-605)||(11133076-11133182)
chr2 (502-586)||(36413780-36413865)
chr2 (499-605)||(5029087-5029194)
chr2 (509-599)||(32944069-32944160)
chr2 (489-605)||(34107275-34107393)
chr2 (509-605)||(2057482-2057577)
chr2 (509-605)||(18065255-18065352)
chr2 (548-605)||(20684272-20684329)
chr2 (501-596)||(40471163-40471259)
chr2 (499-592)||(10602019-10602114)
chr2 (499-605)||(18089730-18089837)
chr2 (489-594)||(20942085-20942192)
chr2 (499-605)||(26975286-26975392)
chr2 (499-614)||(29664594-29664709)
chr2 (556-606)||(36386158-36386208)
chr2 (575-612)||(17896819-17896856)
chr2 (501-605)||(22355084-22355189)
chr2 (499-605)||(41195931-41196037)
chr2 (509-605)||(407480-407576)
chr2 (548-611)||(2935811-2935875)
chr2 (506-605)||(31088991-31089091)
chr2 (517-591)||(20972826-20972901)
chr2 (566-605)||(36277757-36277796)
chr2 (556-599)||(44132608-44132651)
chr2 (488-591)||(10767002-10767108)
chr2 (499-600)||(29713076-29713178)
chr2 (499-537)||(32677399-32677437)
chr2 (565-595)||(34376553-34376583)
chr2 (560-614)||(35352459-35352513)
chr2 (490-583)||(36345158-36345252)
chr2 (509-610)||(37065431-37065533)
chr2 (499-537)||(41305053-41305091)
chr2 (560-605)||(5772861-5772906)
chr2 (566-599)||(6496446-6496479)
chr2 (511-595)||(6649959-6650041)
chr2 (536-605)||(24586648-24586717)
chr2 (548-605)||(30876951-30877008)
chr2 (489-537)||(35352380-35352429)
chr2 (509-537)||(2394970-2394998)
chr2 (499-596)||(3037611-3037708)
chr2 (509-537)||(5807764-5807792)
[»] scaffold0168 (1 HSPs)
scaffold0168 (499-605)||(34020-34127)
[»] scaffold0119 (1 HSPs)
scaffold0119 (489-605)||(1040-1158)
[»] scaffold2098 (1 HSPs)
scaffold2098 (523-599)||(625-702)
[»] scaffold0002 (1 HSPs)
scaffold0002 (499-599)||(440406-440507)
[»] scaffold0712 (1 HSPs)
scaffold0712 (558-605)||(4521-4568)
[»] scaffold0709 (1 HSPs)
scaffold0709 (558-605)||(4541-4588)
[»] scaffold0118 (1 HSPs)
scaffold0118 (499-612)||(37315-37429)
[»] scaffold0054 (1 HSPs)
scaffold0054 (498-606)||(67161-67270)
[»] scaffold0013 (1 HSPs)
scaffold0013 (539-609)||(245484-245554)
[»] scaffold0129 (1 HSPs)
scaffold0129 (500-586)||(7076-7163)
[»] scaffold0229 (1 HSPs)
scaffold0229 (523-576)||(22454-22507)
[»] scaffold0011 (1 HSPs)
scaffold0011 (509-593)||(19392-19477)
[»] scaffold0070 (2 HSPs)
scaffold0070 (558-605)||(12565-12613)
scaffold0070 (433-473)||(14394-14434)


Alignment Details
Target: chr3 (Bit Score: 498; Significance: 0; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 19 - 626
Target Start/End: Complemental strand, 44592591 - 44591980
Alignment:
Q  19 acacacgcacactgcacaagtagtcagtagtaaaagtgatagatcactagcagtgcagcatctgattcattttgaaaggtggtgcttgagtgtgagatat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44592591 acacacgcacactgcacaagtagtcagtagtaaaagtgatagatcactagcagtgcagcatctgattcattttgaaaggtggtgtttgagtgtgagatat 44592492  T
Q  119 ggagttggtaaagtagcaaattcgttccttgtgatggtgaaagatacgatagtaacagagagtagtaaatggtgagcgtgggtggtaacagtgtggggga 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44592491 ggagttggtaaagtagcaaattcgttccttgtgatggtgaaagatactatagtaacagagagtagtaaatggtgagcgtgggtggtaacagtgtggggga 44592392  T
Q  219 agaaacacagacacggcaacagcaagcaattgacaacacaatggaaatattagatggcacttggctcaa----attgacgtgggttgctgcaccaacgca 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||    
T  44592391 agaaacacagacacggcaacagcaagcaattgacaacacaatggaaatattagatggcacttggctcaagtacattgacgtgggttgctgcaccaacgca 44592292  T
Q  315 aaatggaggaaatgtttgtgtctatcaaatctcaactttgacatttcacatttgtgaatgcaacaattgattcatttcacattttttaaatcttcattgc 414  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  44592291 aaatggaggaaatgttcgtgtctatcaaatcttaaatttgacatttcacatttgtgaatgcaacaattgattcatttcacatttttgaaatcttcattgg 44592192  T
Q  415 tccgtctatcaatatatattttttaaaaaaggaaccaaatcaaactaactagtttggatcgattcannnnnnnggtcaagtagttagtggctataattca 514  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||       |||||||||| ||||||||||||||||    
T  44592191 tccgtctatcaatatatattttttaaaaaaggaaccaaattaaactaactagtttggatcgatccatttttttggtcaagtagctagtggctataattca 44592092  T
Q  515 cctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 614  Q
    ||||||||||||||||||||| ||||||||||||| || ||| |||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  44592091 cctttttcaaggtgaataagtagatgttcgggttttgaactctgacccctgcatataacaatgcatgttcctaccaactgagctaagctcacgggaactt 44591992  T
Q  615 ggatcgattcat 626  Q
    |||||| |||||    
T  44591991 ggatcggttcat 44591980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 501 - 608
Target Start/End: Complemental strand, 51017895 - 51017788
Alignment:
Q  501 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||| ||||||| |||||||| ||||||||||||  ||| |||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  51017895 gtggctagaattcacttttttcaaagtgaataagtggggtgtccgggtt-cgaactccgactcctgcatataacaatgcatgtccctgccaactgagcta 51017797  T
Q  600 agctcatgg 608  Q
      |||||||    
T  51017796 tactcatgg 51017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 40160843 - 40160736
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||| |||||||||||||||  ||| |||| ||| | | ||  |||||||||||||||||||||||||||||||| |||||    
T  40160843 tagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccccggcatataacaatgcatgtccctgccaattgagc 40160744  T
Q  598 taagctca 605  Q
    || |||||    
T  40160743 tatgctca 40160736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 599
Target Start/End: Complemental strand, 23237460 - 23237369
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||||||||||||||| ||||||| |||| |||| |||  ||||| ||||||||||  ||||||| ||||||||||||||||||||||||||    
T  23237460 aattcacctttttcaacgtgaatatgtgggatgtccggagttcgaactccgacccctacatataataatgcatgtccctgccaactgagcta 23237369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 605
Target Start/End: Original strand, 24160503 - 24160622
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    ||||||||||| | ||||||| |||||| |||||| || ||||||||||||| ||| |||| ||||| | |||||||| |||||||||| |||||||| |    
T  24160503 ggtcaagtagtctggtggctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctc 24160602  T
Q  586 tgccaactgagctaagctca 605  Q
    ||||||||||| || |||||    
T  24160603 tgccaactgagttatgctca 24160622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 24130678 - 24130560
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| |||||||||  ||||| ||||||||||||||||||||||  ||| |||| ||| | | ||| |||| ||||||||||||| ||||||||    
T  24130678 gtcaagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatgtccct 24130579  T
Q  587 gccaactgagctaagctca 605  Q
    |||||||||| || |||||    
T  24130578 gccaactgagttatgctca 24130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 6054212 - 6054305
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 591  Q
    |||||| || |||||||||||||||||||||||||||| | |||||||  ||||| |||||||| | |||| ||||||| ||||||||||||||    
T  6054212 tagtggttagaattcacctttttcaaggtgaataagtgaggtgttcggagttcgaactccgacctctgcatctaacaatacatgtccctgccaa 6054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 4010005 - 4010112
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || |||||| | |||||||||||||||| |||  |||||||| ||| | || || |||| |||||||||||||||||||||| ||||||||||    
T  4010005 tagtggttagaattcaacattttcaaggtgaataaatggggtgttcggggttcaaactgcggcccctgcatataacaatgcatgtccctaccaactgagc 4010104  T
Q  598 taagctca 605  Q
    || |||||    
T  4010105 tatgctca 4010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 21248977 - 21249077
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||| || ||||| | ||| |||| |||||||| ||| |||||| ||| |||||||||    
T  21248977 tagtggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaaccccggcccctgcatataataat-catgtctctgtcaactgagc 21249075  T
Q  598 ta 599  Q
    ||    
T  21249076 ta 21249077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 28951964 - 28951867
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||| |||||||||||||||||||||  |||||||| ||||| | | |||||| |||||||| |||||||||  |||||||||||| || |||||    
T  28951964 aattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatgctca 28951867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 32080159 - 32080062
Alignment:
Q  503 ggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| ||||| | |||||||   ||||||| ||| |||| |||||| ||||||||||    
T  32080159 ggctagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacccatacatataataattcatgcccctgcaaactgagcta 32080062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 43774291 - 43774191
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  |||||||||||||||  |||  ||| ||||| | |||||||| ||||||||||||||| |||||||||||||||||    
T  43774291 tagtggctagaattcaccttat--aaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgag 43774194  T
Q  597 cta 599  Q
    |||    
T  43774193 cta 43774191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 16874239 - 16874284
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  16874239 cccctgcatataacaatgcatgtccctgccaactgagctatgctca 16874284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 605
Target Start/End: Original strand, 42665930 - 42666019
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||||||||||  ||| |||  ||||| |||||||||| |||| ||||||||||| ||| |||||||| || ||||||||    
T  42665930 tttttcaaggtgaataagtggggtgtccggagttcgaactccgacccctgcatttaacaatgcatatccatgccaactaagttaagctca 42666019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 47191479 - 47191373
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 596  Q
    ||||||||| |||||| ||| |  |||||||||||||||  |||||||| ||||| ||||  |||| |||||||| ||||||| ||||||||||||||||    
T  47191479 tagtggctagaattcatcttat--aaggtgaataagtggggtgttcggggttcgaactccagcccctgcatataataatgcattgtccctgccaactgag 47191382  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  47191381 ctatgctca 47191373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 599
Target Start/End: Complemental strand, 51493717 - 51493604
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| |||||| || ||||||| |||||| |||||| |||||||   ||||||| ||||| | |||||||  ||||| ||||||||||||||||    
T  51493717 gtcaagtagtatagtggttagaattcacttttttcgaggtgattaagtggggcgttcggggttcgaaccccgacccttgcataaaacaatgcatgtccct 51493618  T
Q  587 g-ccaactgagcta 599  Q
    | ||||||||||||    
T  51493617 gcccaactgagcta 51493604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 565 - 605
Target Start/End: Original strand, 30745785 - 30745825
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  30745785 gcatataacaatgcatgtccctgccaactgagctatgctca 30745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 34407080 - 34407184
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| |||||| | |||||||| |||||||||||  |||  ||| ||||| | || ||||| |||||||| |||||||||||||||||||||||  ||    
T  34407080 tggctagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgccaactgagtcaa 34407179  T
Q  601 gctca 605  Q
    |||||    
T  34407180 gctca 34407184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 509 - 595
Target Start/End: Original strand, 4045631 - 4045718
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    ||||||||||||||||| |||||||||||  ||| ||   ||||| |  ||||||| ||||||||||||||||||||||| |||||||    
T  4045631 aattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatgcatgtccctgtcaactga 4045718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 4478355 - 4478462
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||| || ||||| ||| ||||||||| |||||| |||| ||||| | |||||||| |||||||| ||||||||| | | | ||||||||    
T  4478355 tagtggctaaaatttacatttttaaagatgaataagtgggatgtccgggattcgaaccccgacccctgcatataataatgcatgttcatactaactgagc 4478454  T
Q  598 taagctca 605  Q
    || |||||    
T  4478455 tatgctca 4478462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 559 - 614
Target Start/End: Complemental strand, 12236646 - 12236591
Alignment:
Q  559 accccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 614  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||| ||| ||||    
T  12236646 acccctgcatataataatgcatgtccctgccaactgagctacgctcacggggactt 12236591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 589
Target Start/End: Complemental strand, 27119384 - 27119293
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgcc 589  Q
    ||||| ||| ||||| ||||||| ||||  |||||||||  |||||||| ||||| | |||||| | |||||||||||||||||||||||||    
T  27119384 tagtgactagaattctcctttttaaaggaaaataagtggggtgttcgggattcgaaccccgacctctgcatataacaatgcatgtccctgcc 27119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 565 - 599
Target Start/End: Original strand, 12143461 - 12143495
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||||||||||||||||||||||||||||||||||    
T  12143461 gcatataacaatgcatgtccctgccaactgagcta 12143495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 607
Target Start/End: Complemental strand, 36842271 - 36842161
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||| || ||||||| |||||||| |||||||||| |||||| |||| ||||| | |||||||| | || ||| ||||||| |||||  ||||||||    
T  36842271 ttagtggttagaattcacttttttcaaagtgaataagtgggatgtacggggttcgaaccccgacccctgaatttaaaaatgcatatccctatcaactgag 36842172  T
Q  597 ctaagctcatg 607  Q
     || |||||||    
T  36842171 ttatgctcatg 36842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 567 - 613
Target Start/End: Complemental strand, 38507687 - 38507641
Alignment:
Q  567 atataacaatgcatgtccctgccaactgagctaagctcatgggaact 613  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||    
T  38507687 atataataatgcatgtccctgccaactgagctatgctcacgggaact 38507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 609
Target Start/End: Complemental strand, 43911714 - 43911611
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||        | | |||||||| ||||||||||||  ||||| ||||||||| |||    
T  43911714 tagtggcaataattcacatttttcaaggtgaataagtggagtgttc--------agccccgacccctgcatataacaatatatgtctctgccaactaagc 43911623  T
Q  598 taagctcatggg 609  Q
    || |||||||||    
T  43911622 tatgctcatggg 43911611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 3973348 - 3973303
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||    
T  3973348 cccctgcatataacaatgcatgtccctaccaactgagctatgctca 3973303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 3996528 - 3996573
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||    
T  3996528 cccctgcatataacaatgcatgtccctaccaactgagctatgctca 3996573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 14868766 - 14868685
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  |||||||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  14868766 gtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 14868685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 19137665 - 19137620
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||    
T  19137665 cccctgcatataacaatgcatgttcctgccaactgagctatgctca 19137620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 36331715 - 36331821
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 596  Q
    ||||||||| ||||||| ||||  || ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||||||| ||||    
T  36331715 tagtggctagaattcacttttt--aaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaattgag 36331812  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  36331813 ctatgctca 36331821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 604
Target Start/End: Original strand, 794001 - 794101
Alignment:
Q  504 gctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagct 603  Q
    |||| ||||||||| |||||| | |||||||||| ||| |||| |||||   ||| |||| ||||||||||||||||||| ||  || |||||||| |||    
T  794001 gctagaattcacctctttcaaagagaataagtgggtgtccggggttcgaatcccggcccccgcatataacaatgcatgtctctatcagctgagctatgct 794100  T
Q  604 c 604  Q
    |    
T  794101 c 794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 3461699 - 3461818
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    |||||||||| ||| || || |||||||||| |||||  ||||||| |||   |||||||| ||||| | || |||||  ||||||||||||||||||||    
T  3461699 gtcaagtagtctagcggttagaattcaccttattcaaaatgaataaatgggggtgttcggggttcgaaccccaacccctacatataacaatgcatgtccc 3461798  T
Q  586 tgccaactgagctaagctca 605  Q
    || |||||||| || |||||    
T  3461799 tgtcaactgagttatgctca 3461818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 535
Target Start/End: Original strand, 38571397 - 38571445
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagt 535  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  38571397 ggtcaagtagtctagtggctagaattcaccattttcaaggtgaataagt 38571445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 595
Target Start/End: Original strand, 51412022 - 51412074
Alignment:
Q  543 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    |||| ||||| | ||||| || |||||||||||||||||||||||||||||||    
T  51412022 cgggattcgaaccccgactcctgcatataacaatgcatgtccctgccaactga 51412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 605
Target Start/End: Original strand, 6951834 - 6951884
Alignment:
Q  555 tccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||| |||||||| |||||||||||||| |||||||| || |||||    
T  6951834 tccgacccctgcatataataatgcatgtccctgtcaactgagttatgctca 6951884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 608
Target Start/End: Complemental strand, 23305786 - 23305744
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    ||||||||||||||||||||| ||||||||| || ||||||||    
T  23305786 catataacaatgcatgtccctaccaactgagttatgctcatgg 23305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 3993756 - 3993801
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| ||||||||||||||||||||||  ||||||||||| |||||    
T  3993756 cccctgcatataacaatgcatgtccctctcaactgagctatgctca 3993801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 9625064 - 9624983
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  9625064 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 9624983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Original strand, 27183695 - 27183776
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  27183695 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 27183776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 538
Target Start/End: Original strand, 49299217 - 49299266
Alignment:
Q  490 tcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga 538  Q
    ||||||||| ||||||||| |||||| |||| ||||||||||||||||||    
T  49299217 tcaagtagtctagtggctagaattcagctttctcaaggtgaataagtgga 49299266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 610
Target Start/End: Complemental strand, 49639134 - 49639024
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||   ||||||||||||||||  |||||||| ||||| | ||| ||||  ||||||| |||||||   ||| ||||||||||    
T  49639134 tagtggctagaattcacctta--caaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagc 49639037  T
Q  598 taagctcatggga 610  Q
    || ||||| ||||    
T  49639036 tatgctcacggga 49639024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 593
Target Start/End: Original strand, 53670329 - 53670409
Alignment:
Q  512 tcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 593  Q
    |||||||||| ||||||| |||| || |||||||| ||||| |||  ||||| ||||||||||||  ||||| |||||||||    
T  53670329 tcaccttttttaaggtgactaagggg-tgttcgggattcgaactcgaacccctgcatataacaatctatgtctctgccaact 53670409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 7020883 - 7020775
Alignment:
Q  499 tagtggctataattcacctttttca-aggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||| |||||||||||| |  |||||||||||| || ||  |||| ||||| | |||||||  | |||||| |||||||||| |||||||||||     
T  7020883 tagtggctagaattcaccttttgctcaggtgaataagttgggtgaccggggttcgaaccccgacccatgtatataataatgcatgtctctgccaactgat 7020784  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  7020783 ctatgctca 7020775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 523 - 610
Target Start/End: Original strand, 16277962 - 16278050
Alignment:
Q  523 aaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggga 610  Q
    ||||||||||||||| |||| |||  |||||   |||||||| |||||||| ||||||||  ||| |||||||||||| ||||| ||||    
T  16277962 aaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcatggtcctaccaactgagctatgctcacggga 16278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 537
Target Start/End: Complemental strand, 17262317 - 17262289
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||||||||||||||||||||||    
T  17262317 aattcacctttttcaaggtgaataagtgg 17262289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 580
Target Start/End: Complemental strand, 28963046 - 28962990
Alignment:
Q  525 ggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcat 580  Q
    ||||||||||||| ||||||||| ||||| | |||||||| | ||||||||||||||    
T  28963046 ggtgaataagtgggatgttcgggattcgaaccccgacccctgtatataacaatgcat 28962990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 610
Target Start/End: Original strand, 31917922 - 31917966
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagctaagctcatggga 610  Q
    ||||||||||||||||| ||| | |||||||||| ||||||||||    
T  31917922 catataacaatgcatgttcctacaaactgagctatgctcatggga 31917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 613
Target Start/End: Original strand, 46416281 - 46416325
Alignment:
Q  569 ataacaatgcatgtccctgccaactgagctaagctcatgggaact 613  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||||    
T  46416281 ataataatgcatgtccttgccaactgagctatgctcacgggaact 46416325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 537
Target Start/End: Complemental strand, 47497196 - 47497148
Alignment:
Q  490 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  47497196 tcaagtagtttagtggttaaaattcaccttttttaaggtgaataagtgg 47497148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 601
Target Start/End: Complemental strand, 48894188 - 48894104
Alignment:
Q  517 tttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 601  Q
    ||||| ||||||||||||| | | || | | ||||| ||||||||||   |||||||||||||||| | || |||||||||||||    
T  48894188 ttttttaaggtgaataagttggtatttgaggttcgaactccgacccctatatataacaatgcatgttcttgtcaactgagctaag 48894104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 9768796 - 9768903
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||| |||| |||||||||||||||||||||||||||||  ||| |||| ||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  9768796 tagtagctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagc 9768895  T
Q  598 taagctca 605  Q
    || |||||    
T  9768896 tatgctca 9768903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 18003935 - 18003817
Alignment:
Q  488 ggtcaagtagttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||  |||||||| |||||||||||||| ||||||||||||||  ||||||||  |||| | ||| |||| ||||||||||||||||||||||    
T  18003935 ggtcaagtagccagtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccct 18003836  T
Q  587 gccaactgagctaagctca 605  Q
    ||||||||||||| |||||    
T  18003835 gccaactgagctatgctca 18003817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 3341723 - 3341824
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| |||| ||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  3341723 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgccaactgagc 3341822  T
Q  598 ta 599  Q
    ||    
T  3341823 ta 3341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 596
Target Start/End: Original strand, 2903014 - 2903112
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||| | |||||| | ||||||||||||||||||||||| ||||||||    
T  2903014 tagtggctagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatgcatgtccctggcaactgag 2903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 48260179 - 48260283
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| ||||||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||| ||||||| ||||||  ||||||||||||||||||     
T  48260179 tggctagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaactccgaccccgacatataataatgcacatccctgccaactgagctat 48260278  T
Q  601 gctca 605  Q
    |||||    
T  48260279 gctca 48260283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 41677168 - 41677061
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||||||||||| || ||| |||  ||||| | |||||||| |||||||| |||| ||||| |||||||||||||    
T  41677168 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgccaactgagc 41677069  T
Q  598 taagctca 605  Q
    || |||||    
T  41677068 tacgctca 41677061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 499 - 596
Target Start/End: Original strand, 50199463 - 50199561
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||| |||| |||||||||||||||||||||| || ||| |||| ||||| | ||| |||| |||||||||||||||||||||| |||||||||    
T  50199463 tagtggctagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgtccctaccaactgag 50199561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 606
Target Start/End: Original strand, 9769566 - 9769675
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | || | |||  ||||||| |||||||||||||||||||||||    
T  9769566 ttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaactgag 9769665  T
Q  597 ctaagctcat 606  Q
    ||| ||||||    
T  9769666 ctatgctcat 9769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 613
Target Start/End: Original strand, 47645789 - 47645898
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||||      |||| ||| |||| ||||| | |||||| | ||||||||||||||||||| |||||||||||||    
T  47645789 tagtggctagaattcacctttttcaaggtg------tggagtgtccgggcttcgaaccccgacctctgcatataacaatgcatgtctctgccaactgagc 47645882  T
Q  598 taagctcatgggaact 613  Q
    || |||||||||||||    
T  47645883 tatgctcatgggaact 47645898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 503 - 605
Target Start/End: Original strand, 11238019 - 11238122
Alignment:
Q  503 ggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 601  Q
    ||||| ||||||||||||||||| |||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||||||| ||||| |||||||| |    
T  11238019 ggctagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtccatgccatctgagctatg 11238118  T
Q  602 ctca 605  Q
    ||||    
T  11238119 ctca 11238122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 42908879 - 42908772
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||| |||||||||||  ||||||||||  | | |||  ||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  42908879 tagtggttagaattctcctttttcaagaagaataagtggggtatccggagttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagc 42908780  T
Q  598 taagctca 605  Q
    ||||||||    
T  42908779 taagctca 42908772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 1721244 - 1721141
Alignment:
Q  503 ggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 601  Q
    ||||| ||||||||||||| |||||||||||||| | ||| |||| |||||   ||| |||| |||||||||||||||||| ||| |||||||||||| |    
T  1721244 ggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgttcctaccaactgagctatg 1721145  T
Q  602 ctca 605  Q
    ||||    
T  1721144 ctca 1721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 18179436 - 18179329
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||| |||||||||||| |||||||  || |||  ||| ||||| |||||  ||| ||||||||||||||||||||||||||||||||     
T  18179436 tagtggctagaattctcctttttcaaggagaataagcagggtgtctggggttcgaactccggtccctgcatataacaatgcatgtccctgccaactgagt 18179337  T
Q  598 taagctca 605  Q
    || |||||    
T  18179336 tatgctca 18179329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 43020719 - 43020612
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||| ||||||||||||||| |||||  ||| || | ||||| | || ||||| |||||||| ||||||||||||||||||| ||||    
T  43020719 tagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtccctgccaaccgagc 43020620  T
Q  598 taagctca 605  Q
    || |||||    
T  43020619 tatgctca 43020612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 12553302 - 12553201
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctcc-gaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||| |||||||||||||||| ||||||||||||  ||| |||| ||||| | || | |||| |||||||||||||||||| ||| |||||||||    
T  12553302 tagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccccggcccctgcatataacaatgcatgttcctaccaactgag 12553203  T
Q  597 ct 598  Q
    ||    
T  12553202 ct 12553201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 511 - 605
Target Start/End: Original strand, 52961081 - 52961176
Alignment:
Q  511 ttcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||| ||| ||||||||||||   || |||| ||||| | ||| |||| |||||||||||||||||||| |||||||||||||| |||||    
T  52961081 ttcaccttttccaacgtgaataagtggggcgtccggggttcgaaccccggcccctgcatataacaatgcatgtccttgccaactgagctatgctca 52961176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 195163 - 195045
Alignment:
Q  489 gtcaagtag-ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||| || |||  ||| | ||| |  |  |||| ||||||||  ||||||||||||    
T  195163 gtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtctggggtacgaacctcagcccctgcatataattatgcatgtccct 195064  T
Q  587 gccaactgagctaagctca 605  Q
    ||||||||||||| |||||    
T  195063 gccaactgagctacgctca 195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 596
Target Start/End: Original strand, 4511512 - 4511610
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||| || ||||||||||||| ||||||||||||| ||| || |||| ||| | | |||||||| |||||||| ||||||||||| |||||| ||||    
T  4511512 tagtggttagaattcaccttttttaaggtgaataagtgggacgtccgggattcaaacaccgacccctgcatataataatgcatgtccttgccaattgag 4511610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 23750258 - 23750152
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||||||||||||| ||||||||| || ||||| || || || | |||||||  | |||||||||||||| ||||| ||||||||||    
T  23750258 tagtggttagaattcacctttttcaagatgaataagtggggtgttcagggtttgaaccccgacccatgtatataacaatgcatatccctaccaactgagc 23750159  T
Q  598 taagctc 604  Q
    || ||||    
T  23750158 tatgctc 23750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 537
Target Start/End: Complemental strand, 33844736 - 33844687
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  33844736 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtgg 33844687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 33949242 - 33949291
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  33949242 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtgg 33949291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 596
Target Start/End: Original strand, 47141838 - 47141891
Alignment:
Q  543 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  47141838 cggggttcgaactccgacccctgcatataacaatgcatgtccctgtcaactgag 47141891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 50576005 - 50575908
Alignment:
Q  503 ggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||||||||||||||| |||||||||||||| | |||  | | ||||| | ||  |||  |||||||||||||||||||||| ||||||||||||    
T  50576005 ggctataattcaccttttttaaggtgaataagtgaggtgtctgaggttcgaaccccagcccttgcatataacaatgcatgtcccttccaactgagcta 50575908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 47763399 - 47763487
Alignment:
Q  526 gtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaac 612  Q
    |||||||||||| |||| || | ||||| ||||| |||| |||||||| ||||||| ||||||||||||||||||| ||||| ||||||    
T  47763399 gtgaataagtgggatgtccgaggttcgaactccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacgggaac 47763487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 611
Target Start/End: Original strand, 7015672 - 7015787
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaat-aagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    ||||||| || ||||||| ||||||||||||||| ||||||  |||||||  ||||| |  |  ||||  |||||||||||||||||||| |||||||||    
T  7015672 ttagtggttaaaattcacatttttcaaggtgaattaagtggggtgttcggagttcgaacctcagcccctacatataacaatgcatgtcccagccaactga 7015771  T
Q  596 gctaagctcatgggaa 611  Q
    |||| ||||| |||||    
T  7015772 gctatgctcacgggaa 7015787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 9527476 - 9527426
Alignment:
Q  556 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  9527476 ccgacccctgcatataacaatgcattgtccctgccaactgagctatgctca 9527426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 566 - 599
Target Start/End: Complemental strand, 5862168 - 5862135
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||||||||||||||||||||||||||||||    
T  5862168 catataacaatgcatgtccctgccaactgagcta 5862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 537
Target Start/End: Complemental strand, 19866594 - 19866545
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 537  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  19866594 gtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtgg 19866545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 29491551 - 29491470
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctca 29491470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 580
Target Start/End: Complemental strand, 11405563 - 11405482
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat 580  Q
    |||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | |||||||| ||||||||||||||||    
T  11405563 ttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcat 11405482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 7906313 - 7906420
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||| ||||| ||||| |||||| ||  ||| | || ||||| | ||  |||| |||||||||||||||||||||| |||||||| |    
T  7906313 tagtggctagaattcacattttttaaggtcaataagcggggtgtcccgggttcgaaccccagcccctgcatataacaatgcatgtccctaccaactgaac 7906412  T
Q  598 taagctca 605  Q
    || |||||    
T  7906413 tatgctca 7906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 614
Target Start/End: Original strand, 18234336 - 18234428
Alignment:
Q  521 tcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 614  Q
    ||||||||||||||| || |||||||| ||||| | |||||| |  ||||||| |||||  |||||||||||||||||||| |||| ||| ||||    
T  18234336 tcaaggtgaataagtagagtgttcgggattcgaaccccgacctctacatataataatgc--gtccctgccaactgagctaacctcacggggactt 18234428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 605
Target Start/End: Complemental strand, 43327090 - 43327011
Alignment:
Q  527 tgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||| |||||  || ||||| || ||||||| |||||||||||| ||||||||||| ||||||| || |||||    
T  43327090 tgaataagtgggatgtttagggttcgaacttcgacccctgcatataacaatacatgtccctgcaaactgagttatgctca 43327011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 605
Target Start/End: Complemental strand, 49632333 - 49632294
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  49632333 catataacaatgcatgtccctgccaattgagctacgctca 49632294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 9931206 - 9931088
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| |||| | || |||||||||| || |||||||||||||||  |||| ||| ||||| ||||  | |  |||||||| |||||||||||||    
T  9931206 gtcaagtagtctagtagttagaattcaccttctttaaggtgaataagtggggtgtttggggttcgaactccagctcttgcatataataatgcatgtccct 9931107  T
Q  587 gccaactgagctaagctca 605  Q
    || ||||||| || |||||    
T  9931106 gctaactgagttatgctca 9931088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 537
Target Start/End: Original strand, 9976371 - 9976409
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  9976371 tagtggctagaattcacttttttcaaggtgaataagtgg 9976409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 534
Target Start/End: Complemental strand, 27684693 - 27684647
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataag 534  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  27684693 gtcaagtagtttagtggctaaaattcacttttttcaaggtgaataag 27684647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 614
Target Start/End: Original strand, 33176152 - 33176206
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 614  Q
    |||| |||||||||||||||| ||||| |||||||||||| ||||| ||| ||||    
T  33176152 cccctgcatataacaatgcatatccctaccaactgagctatgctcaaggggactt 33176206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 533
Target Start/End: Complemental strand, 35424260 - 35424214
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataa 533  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  35424260 ggtcaagtagtctagtggctagaattcatctttttcaaggtgaataa 35424214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 566 - 595
Target Start/End: Complemental strand, 3569084 - 3569055
Alignment:
Q  566 catataacaatgcatgtccctgccaactga 595  Q
    ||||||||||||||||||||||||||||||    
T  3569084 catataacaatgcatgtccctgccaactga 3569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 23973458 - 23973507
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| ||||||||| ||||||| |||||||| ||||||||||||    
T  23973458 gtcaagtagtctagtggctagaattcacatttttcaacgtgaataagtgg 23973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 27654997 - 27655030
Alignment:
Q  504 gctataattcacctttttcaaggtgaataagtgg 537  Q
    |||| |||||||||||||||||||||||||||||    
T  27654997 gctagaattcacctttttcaaggtgaataagtgg 27655030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 38021333 - 38021252
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| ||||| |||| |||||||| ||||||| |||| |||||||||||||| |||||    
T  38021333 gtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtccttgccaactgagctatgctca 38021252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 593
Target Start/End: Complemental strand, 38028635 - 38028550
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 593  Q
    ||||||| |||||||||||||||||||||  |||   || ||||| ||||| |||  |||||||||||||||||||| || |||||    
T  38028635 aattcacatttttcaaggtgaataagtggggtgtctagggttcgaactccggccctagcatataacaatgcatgtccttgtcaact 38028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 605
Target Start/End: Original strand, 52765707 - 52765824
Alignment:
Q  490 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctg 587  Q
    |||||||||| |||||||| |||||||||||||  | ||||||||||| ||||| |||| ||| | | || ||||  ||||| |||||| ||||||| ||    
T  52765707 tcaagtagttcagtggctagaattcacctttttttaagtgaataagtgagatgtccgggattcaaaccccaacccatgcatacaacaatacatgtccatg 52765806  T
Q  588 ccaactgagctaagctca 605  Q
    |||||  |||||| ||||    
T  52765807 ccaacaaagctaaactca 52765824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 537
Target Start/End: Complemental strand, 3797972 - 3797925
Alignment:
Q  490 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||    
T  3797972 tcaagtagtttaatggctataattcaccttttt-aaggtgaataagtgg 3797925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 4288697 - 4288589
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||| |||||| |||||| ||||||||||| || | |||  ||| ||||| ||| |||||| |||||||| |||| |||||| | |||| ||||    
T  4288697 ttagtggctagaattcatcttttttaaggtgaataaatgaggtgtctggggttcgaactctgacccctgcatataataatgtatgtccataccaattgag 4288598  T
Q  597 ctaagctca 605  Q
     || |||||    
T  4288597 ttatgctca 4288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 4429471 - 4429576
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  ||| |||||||||||| ||||| || ||||| | || ||||| |||||||| |||||||   ||| ||||||||||    
T  4429471 tagtggctagaattcaccttat--aagatgaataagtggaatgttcagggttcgaaccccaacccctgcatataataatgcattgtcctaccaactgagc 4429568  T
Q  598 taagctca 605  Q
    || |||||    
T  4429569 tatgctca 4429576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 599
Target Start/End: Complemental strand, 5684169 - 5684129
Alignment:
Q  559 accccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||| |||||||| |||||||||| |||||||||||||||    
T  5684169 acccctgcatataataatgcatgtctctgccaactgagcta 5684129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 605
Target Start/End: Complemental strand, 9004387 - 9004347
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||||||||||||||||||||| |||||    
T  9004387 gcatataacaatatatgtccctgccaactgagctatgctca 9004347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 493 - 580
Target Start/End: Complemental strand, 31965626 - 31965538
Alignment:
Q  493 agtagttagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcat 580  Q
    ||||||||||| ||| ||||||| ||||  |||||||||||||| | |||||||  ||||| | |||| ||| |||||||| |||||||    
T  31965626 agtagttagtgactagaattcactttttaaaaggtgaataagtgaggtgttcggagttcgaaccccgatccctgcatataataatgcat 31965538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 592
Target Start/End: Original strand, 34870318 - 34870362
Alignment:
Q  548 ttcgatctccgaccccggcatataacaatgcatgtccctgccaac 592  Q
    ||||| |||||||||| |||||||||||||||||| |||| ||||    
T  34870318 ttcgaactccgacccctgcatataacaatgcatgtacctgtcaac 34870362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 605
Target Start/End: Original strand, 37262159 - 37262199
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||| ||||||||||||||||||| ||| |||||    
T  37262159 gcatataacaacgcatgtccctgccaactgaactatgctca 37262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 604
Target Start/End: Original strand, 47939252 - 47939292
Alignment:
Q  565 gcatataacaatgcat-gtccctgccaactgagctaagctc 604  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  47939252 gcatataacaatgcattgtccctgccaactgagctatgctc 47939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 5e-27; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 34524994 - 34524876
Alignment:
Q  488 ggtcaagtagttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||  |||||||| |||||||||||||| ||||||||||||||  ||||||||  |||| | ||| |||| ||||||||||||||||||||||    
T  34524994 ggtcaagtagccagtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccct 34524895  T
Q  587 gccaactgagctaagctca 605  Q
    ||||||||||||| |||||    
T  34524894 gccaactgagctatgctca 34524876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 502 - 614
Target Start/End: Complemental strand, 30833122 - 30833009
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| ||||| |||||||||||| ||||||||||  ||| |||| ||||| | |||||||| ||||||||||||||||||||||||||||||| |||     
T  30833122 tggctagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactat 30833023  T
Q  601 gctcatgggaactt 614  Q
    ||||||||| ||||    
T  30833022 gctcatggggactt 30833009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 491 - 605
Target Start/End: Original strand, 30668162 - 30668278
Alignment:
Q  491 caagtagt-tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgc 588  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||||||| || |||||| | ||||| ||| |||||| |||||||| ||||||||||  |||    
T  30668162 caagtagtctagtgactataattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgc 30668261  T
Q  589 caactgagctaagctca 605  Q
    |||||||| || |||||    
T  30668262 caactgagttatgctca 30668278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 609
Target Start/End: Complemental strand, 4844262 - 4844140
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| |||||| || ||||||| |||||||||||||||||||| | |||  | | ||  | | |||||||| ||||||||||||||||||||||    
T  4844262 gtcaagtagtctagtggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatgcatgtccct 4844163  T
Q  587 gccaactgagctaagctcatggg 609  Q
    |||||||||| ||  ||||||||    
T  4844162 gccaactgagttatactcatggg 4844140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 26669635 - 26669753
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || |||  ||| ||||| | ||  ||||  |||||||  ||||||||||||    
T  26669635 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccct 26669734  T
Q  587 gccaactgagctaagctca 605  Q
     |||||||||||| |||||    
T  26669735 accaactgagctatgctca 26669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 19680234 - 19680331
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactg 594  Q
    |||||| ||| |||||||||||||||||| |||||||| || ||| |||| ||||| | ||| | || |||||||||||||||||||| |||||||||    
T  19680234 ttagtgtctagaattcacctttttcaaggagaataagtggggtgtccggggttcgaaccccggctcctgcatataacaatgcatgtccatgccaactg 19680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 610
Target Start/End: Complemental strand, 35190869 - 35190759
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||  |||||||| ||||| |||||||||| |||||||| |||||||    || ||||||||||    
T  35190869 tagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcattgttctaccaactgagc 35190772  T
Q  598 taagctcatggga 610  Q
    || ||||||||||    
T  35190771 tatgctcatggga 35190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 565 - 609
Target Start/End: Complemental strand, 8309205 - 8309161
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctcatggg 609  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  8309205 gcatataacaatgcatgtccctgccaactgagctatgctcatggg 8309161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 615
Target Start/End: Complemental strand, 10455851 - 10455733
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||| || ||||| | |||||||||| ||||||||||   ||| |||| ||||| | ||| |||| |||||||||||||||||| ||||||||||||     
T  10455851 tagtggttagaattctcttttttcaaggagaataagtgggggtgtccggggttcgaaccccggcccctgcatataacaatgcatgttcctgccaactgaa 10455752  T
Q  597 ctaagctcatgggaacttg 615  Q
    ||| ||||| ||| |||||    
T  10455751 ctatgctcacggggacttg 10455733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 14949006 - 14949114
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataa--gtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||||||||||||||||||||||||||||  | || ||| |||  ||||| | |||||| | |||||||| |||| ||||  ||||||||||||    
T  14949006 tagtggctataattcacctttttcaaggtgaataaatgggggtgtccggagttcgaaccccgacctctgcatataataatgtatgtttctgccaactgag 14949105  T
Q  597 ctaagctca 605  Q
     || |||||    
T  14949106 ttatgctca 14949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 591
Target Start/End: Original strand, 7374055 - 7374130
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 591  Q
    ||||| |||||||||||||||  |||||||  ||||| |||||||||   ||||||||||||||||||||||||||    
T  7374055 ttttttaaggtgaataagtggggtgttcggagttcgaactccgacccatacatataacaatgcatgtccctgccaa 7374130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 605
Target Start/End: Complemental strand, 2945646 - 2945596
Alignment:
Q  556 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  2945646 ccgacccctgcatataacaatgcattgtccctgccaactgagctatgctca 2945596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 565 - 599
Target Start/End: Complemental strand, 9031807 - 9031773
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||||||||||||||||||||||||||||||||||    
T  9031807 gcatataacaatgcatgtccctgccaactgagcta 9031773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 610
Target Start/End: Complemental strand, 9422943 - 9422829
Alignment:
Q  498 ttagtggctataattcacctttt-tcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    |||||||||| |||||||||||| |||||||||||||||||  ||| |||  ||||| | ||  | |  | |||||||||||||||||||||||||||||    
T  9422943 ttagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaaccccagctcttgtatataacaatgcatgtccctgccaactga 9422844  T
Q  596 gctaagctcatggga 610  Q
    | || ||||| ||||    
T  9422843 gttatgctcacggga 9422829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 605
Target Start/End: Original strand, 22730686 - 22730796
Alignment:
Q  497 gttagtggctataattcacctt-tttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactg 594  Q
    ||||||||||| |||||||||| ||| |||||||||||||||  ||| || | ||||| || |   ||| ||||||||||||||||||| ||||||||||    
T  22730686 gttagtggctagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactg 22730785  T
Q  595 agctaagctca 605  Q
    || || |||||    
T  22730786 agttatgctca 22730796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 610
Target Start/End: Complemental strand, 12089203 - 12089093
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| ||||| |||| |||||||| |||||||   ||| ||||||||||    
T  12089203 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagc 12089106  T
Q  598 taagctcatggga 610  Q
    || ||||| ||||    
T  12089105 tatgctcacggga 12089093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 559 - 596
Target Start/End: Original strand, 20858431 - 20858468
Alignment:
Q  559 accccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  20858431 acccctgcatataacaatgcatgtccctgccaactgag 20858468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 536
Target Start/End: Original strand, 1395578 - 1395614
Alignment:
Q  500 agtggctataattcacctttttcaaggtgaataagtg 536  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1395578 agtggctagaattcacctttttcaaggtgaataagtg 1395614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 596
Target Start/End: Complemental strand, 1488186 - 1488098
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||| |||| ||||||||||| |||  |||| ||| ||||| | |||||| | ||||||||||||||||||| ||||||| ||||    
T  1488186 aattcaccatttttaaggtgaataaatggggtgtttggggttcgaaccccgacctctgcatataacaatgcatgtctctgccaattgag 1488098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 597
Target Start/End: Original strand, 8253596 - 8253676
Alignment:
Q  517 tttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||||||||||||||    || || ||||| | ||  |||| |||||||||||||||||||| ||||||||||||    
T  8253596 tttttcaaggtgaataagtggggtgtctgggttcgaaccccagcccctgcatataacaatgcatgtccatgccaactgagc 8253676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 12127898 - 12128003
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| |||||  ||||||||| |||||||| |||||||   ||| ||||||||||    
T  12127898 tagtggctagaattcaccttat--aaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcattgtcctaccaactgagc 12127995  T
Q  598 taagctca 605  Q
    || |||||    
T  12127996 tatgctca 12128003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 537
Target Start/End: Complemental strand, 7234070 - 7234035
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||| |||||||||||||||||||||||||||||    
T  7234070 tggctagaattcacctttttcaaggtgaataagtgg 7234035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 8176095 - 8175997
Alignment:
Q  509 aattcacctttttc-aaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||  |||||||||||||||  |||||||  ||||| | ||   ||| ||||||||||||||||||| ||| ||||||||||| |||||    
T  8176095 aattcacctttttttaaggtgaataagtggggtgttcggagttcgaacaccagtccctgcatataacaatgcatgtctctgtcaactgagctatgctca 8175997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 599
Target Start/End: Complemental strand, 17176190 - 17176156
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||||||||||||||||||| |||||||||||    
T  17176190 gcatataacaatgcatgtccctgtcaactgagcta 17176156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 537
Target Start/End: Complemental strand, 32372552 - 32372514
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||| || |||||||||||||||||||||||||||||    
T  32372552 tagtggttaaaattcacctttttcaaggtgaataagtgg 32372514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 604
Target Start/End: Original strand, 20149976 - 20150073
Alignment:
Q  509 aattcacctttttcaaggtgaataagt-ggatgttc-gggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctc 604  Q
    ||||||||||||||||||||||||||| || ||| | ||| ||||| | || | |||  |||||||||| ||| |||||| |||||||||||| ||||    
T  20149976 aattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatgctc 20150073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 604
Target Start/End: Complemental strand, 22182856 - 22182759
Alignment:
Q  509 aattcacctttttcaaggtgaataagt-ggatgttc-gggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctc 604  Q
    ||||||||||||||||||||||||||| || ||| | ||| ||||| | || | |||  |||||||||| ||| |||||| |||||||||||| ||||    
T  22182856 aattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacatataacaacgcaagtccctcccaactgagctatgctc 22182759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 605
Target Start/End: Complemental strand, 31639231 - 31639142
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| ||||| |||||||||| ||| | || ||||| ||||| ||||  ||||||||||||| |||||||| |||||||| || |||||    
T  31639231 ttttttaaggtaaataagtggagtgtcctgggttcgaactccggcccctacatataacaatgcgtgtccctgtcaactgagttatgctca 31639142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 599
Target Start/End: Complemental strand, 6219393 - 6219361
Alignment:
Q  567 atataacaatgcatgtccctgccaactgagcta 599  Q
    |||||| ||||||||||||||||||||||||||    
T  6219393 atataataatgcatgtccctgccaactgagcta 6219361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 615
Target Start/End: Original strand, 14981751 - 14981807
Alignment:
Q  560 ccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaacttg 615  Q
    |||| |||||||| ||||||| ||||||||||||||||||| ||||| ||| |||||    
T  14981751 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacttg 14981807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 596
Target Start/End: Complemental strand, 17347305 - 17347265
Alignment:
Q  556 ccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  17347305 ccgacccatgcatataacaatgcatatccctgccaactgag 17347265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 605
Target Start/End: Complemental strand, 19135970 - 19135930
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||| ||||||||||||||||||| |||||| |||||    
T  19135970 gcatataataatgcatgtccctgccaaccgagctatgctca 19135930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 11246481 - 11246588
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||  ||| || || | |||||||| |||||||||||||||||||||||||||||||||    
T  11246481 tagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatgcatgtccctgccaactgagc 11246580  T
Q  598 taagctca 605  Q
    || |||||    
T  11246581 tatgctca 11246588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 609
Target Start/End: Complemental strand, 38040373 - 38040263
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||| || ||| ||| |  ||||||| |||||||||||||||||||||||||||||||||    
T  38040373 tagtgactataattcacctttttcaagatgaataagtgggatgtccgagtt-cgaacctcgacccctgcatataacaatgcatgtccctgccaactgagc 38040275  T
Q  598 taagctcatggg 609  Q
    || |||||||||    
T  38040274 tatgctcatggg 38040263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 31556926 - 31556825
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||| |||| ||||| |||||||||| |||||||||||||||||||||||| || |||||    
T  31556926 tagtggctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagc 31556827  T
Q  598 ta 599  Q
    ||    
T  31556826 ta 31556825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 503 - 614
Target Start/End: Complemental strand, 27006444 - 27006332
Alignment:
Q  503 ggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaag 601  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||  ||||| | |||||||| ||||||||||||||||| |||||||| |||| ||| |    
T  27006444 ggctagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccgaccccagcatataacaatgcatgcccctgccatctgacctatg 27006345  T
Q  602 ctcatgggaactt 614  Q
    |||| ||| ||||    
T  27006344 ctcacggggactt 27006332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 612
Target Start/End: Original strand, 31280357 - 31280480
Alignment:
Q  490 tcaagtagt-tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgc 588  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||||| |||||||| ||||| |   | |||| |||||||  ||| |||||||||||    
T  31280357 tcaagtagtctagtgggtagaattcacctttttcaaggtggataagtgggtgttcggggttcgaaccttggcccctgcatatagtaatacatgtccctgc 31280456  T
Q  589 caactgagctaagctcatgggaac 612  Q
    ||||||||||| ||||| ||||||    
T  31280457 caactgagctatgctcacgggaac 31280480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 600
Target Start/End: Original strand, 37986854 - 37986956
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |||| ||| | |||||||| | |||||||| ||||||| || || | ||||||||    
T  37986854 tagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatgcatatctctactaactgagc 37986953  T
Q  598 taa 600  Q
    |||    
T  37986954 taa 37986956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 595
Target Start/End: Complemental strand, 28768705 - 28768608
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    |||||| || |||||||||||||||||||| ||||||| |||||| ||| ||||| ||| |||||  |||||| ||||||||||||||| ||||||||    
T  28768705 tagtggttagaattcacctttttcaaggtggataagtgagatgtttgggattcgaactctgacccttgcatatgacaatgcatgtccctaccaactga 28768608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 597
Target Start/End: Complemental strand, 20186983 - 20186875
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||||||  |||  ||| ||  | | |||||||| |||||||| |||||||||||||    
T  20186983 gtcaagtagtctagtggttataattcacttttttcaaggtgaataagtggggtgtctggggtt--aaccccgacccctgcatataataatgcatgtccct 20186886  T
Q  587 gccaactgagc 597  Q
    |||||||||||    
T  20186885 gccaactgagc 20186875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 3535923 - 3536030
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||| ||||| |||||||||||||||  ||| |||| ||||| | ||| | || | ||||||||||||||||||||||||||||| |    
T  3535923 tagtggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaaccccggctcctgtatataacaatgcatgtccctgccaactgaac 3536022  T
Q  598 taagctca 605  Q
    || |||||    
T  3536023 tatgctca 3536030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 597
Target Start/End: Complemental strand, 34325384 - 34325274
Alignment:
Q  489 gtcaagtag-ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||| |||||||||| ||||||  ||||| ||||||||||||| ||||||||| | ||||| | ||   ||| |||||||| |||||||||||||    
T  34325384 gtcaagtagcttagtggctagaattcattttttttaaggtgaataagttggatgttcgagattcgaaccccagtccctgcatataataatgcatgtccct 34325285  T
Q  587 gccaactgagc 597  Q
    | |||||||||    
T  34325284 gtcaactgagc 34325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 605
Target Start/End: Original strand, 42553138 - 42553234
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||| |||||||||||||||||||| | ||| |||| ||||| | ||||||| | ||||||||||||||||||  || ||||||||||| |||||    
T  42553138 aattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccgaccctg-catataacaatgcatgtcgttgtcaactgagctatgctca 42553234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 41405078 - 41405182
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| |||||||||||||||| |||||||| |||| |||  | | ||| | | |||||||  ||||||||||||||||||||||| ||||||| |||     
T  41405078 tggctaaaattcacctttttcaaagtgaataattggagtgtctgcggttccaaccccgacccttgcatataacaatgcatgtccctgtcaactgaactat 41405177  T
Q  601 gctca 605  Q
    |||||    
T  41405178 gctca 41405182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 599
Target Start/End: Original strand, 42781626 - 42781682
Alignment:
Q  543 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||| ||||| | |||| ||| |||||||||||||||||||||||||||||||||||    
T  42781626 cggggttcgaaccccgaaccctgcatataacaatgcatgtccctgccaactgagcta 42781682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 9408982 - 9409049
Alignment:
Q  543 cgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctcatggg 609  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| || | |||||||    
T  9408982 cggggttcgaactccgacccctgcatataacaatgcattgtccctgccaactgagttatgttcatggg 9409049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 13862232 - 13862126
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||| |||||||||||  ||||||||||  ||| |||||| ||| |||||||||| |||||||||||||||| ||| || ||||||| |    
T  13862232 tagtggttagaattctcctttttcaagaagaataagtggggtgtccgggtt-cgaactccgacccctgcatataacaatgcatatccatgtcaactgaac 13862134  T
Q  598 taagctca 605  Q
    || |||||    
T  13862133 tatgctca 13862126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 610
Target Start/End: Complemental strand, 18872625 - 18872517
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||    |||||||||||||||  |||||||| ||||| | |||||||| |||||||| |||||||   ||| ||||||||||    
T  18872625 tagtggctagaattcacctt----aaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagc 18872530  T
Q  598 taagctcatggga 610  Q
    || ||||| ||||    
T  18872529 tatgctcacggga 18872517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 28537243 - 28537136
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||| ||||||| |||||||||| || ||| |||| ||||| | ||| |||  |||||||||||||||||||| || ||| ||||     
T  28537243 tagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccggcccatgcatataacaatgcatgtccatgtcaattgagt 28537144  T
Q  598 taagctca 605  Q
    || |||||    
T  28537143 tatgctca 28537136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 6806632 - 6806735
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagcta 599  Q
    |||||| |||||||||| |  || ||||||||||||| ||| |||| |||||   |||||||| ||||||||||||||| |||| |||||||||||||||    
T  6806632 tggctagaattcaccttat--aatgtgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcattgtctctgccaactgagcta 6806729  T
Q  600 agctca 605  Q
     |||||    
T  6806730 tgctca 6806735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 42455383 - 42455482
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||| ||| |||| ||||| ||||| |||| |||||||| |||||||   ||| ||||||||||    
T  42455383 tagtggctagaattcaccttat--aaggtgaataagtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagc 42455480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 605
Target Start/End: Complemental strand, 17557119 - 17557031
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| |||||||||||||||  ||| ||||||| || | ||||||||  |||||||||||||||||| |||||||||||| || |||||    
T  17557119 ttttttaaggtgaataagtggggtgtccgggttt-gaaccccgacccctacatataacaatgcatgtctctgccaactgagttaggctca 17557031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 25660958 - 25660913
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||    
T  25660958 cccctgcatataacaatgcatatccctgccaactgagctatgctca 25660913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 610
Target Start/End: Original strand, 32158403 - 32158513
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||  |||||||| ||||| | ||| |||| |||||||| |||||||   ||| |||| |||||    
T  32158403 tagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaattgagc 32158500  T
Q  598 taagctcatggga 610  Q
    |||||||| ||||    
T  32158501 taagctcacggga 32158513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 560 - 605
Target Start/End: Original strand, 35813291 - 35813336
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||    
T  35813291 cccctgcatataacaatgcatgtccctgtcaactgagctatgctca 35813336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 605
Target Start/End: Original strand, 40250182 - 40250271
Alignment:
Q  517 tttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||| | |||||||| || |||||| | ||||| | ||||| || ||||||||||||||||||  ||||||||||||||| |||||    
T  40250182 tttttcaatgagaataagtagggtgttcgaggttcgaaccccgactcctgcatataacaatgcatgttactgccaactgagctatgctca 40250271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 7147009 - 7147113
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| |||||||||||||||| || ||||| || | |||  | | ||||| | |||||||| |||||||| ||||||||||| | ||||||||||||     
T  7147009 tggctagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatgcatgtccttaccaactgagctat 7147108  T
Q  601 gctca 605  Q
    |||||    
T  7147109 gctca 7147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 38129000 - 38129080
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgc 578  Q
    |||||| || |||||| | ||||||||||||||||||||| ||| | || ||||| | |||||||| ||||||||||||||    
T  38129000 tagtggttagaattcatcattttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcatataacaatgc 38129080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 601
Target Start/End: Original strand, 8018591 - 8018706
Alignment:
Q  488 ggtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    |||||||||||| |||| ||| |||| || ||||||| |  ||||||||||  ||||| || ||||| |||||||| |  ||||||| ||||||||||||    
T  8018591 ggtcaagtagtttagtgactaaaatttacatttttcaggaagaataagtggggtgttcaggattcgaactccgacctctacatataataatgcatgtccc 8018690  T
Q  586 tgccaactgagctaag 601  Q
    ||| ||||||| ||||    
T  8018691 tgcgaactgagttaag 8018706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 502 - 604
Target Start/End: Complemental strand, 10106735 - 10106632
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| ||||  ||||||||||| |||||||||||  ||| |||| ||||| ||  | ||||  ||||||| |||| |||||||||||||||||||||     
T  10106735 tggctagaatttgcctttttcaagatgaataagtggggtgtccggggttcgaactttggcccctacatataataatggatgtccctgccaactgagctat 10106636  T
Q  601 gctc 604  Q
    ||||    
T  10106635 gctc 10106632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 581
Target Start/End: Original strand, 17137854 - 17137937
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatg 581  Q
    |||||| || ||||||| |||||||||||||||||||||| |||  ||| ||||| | |||| ||| |||||||| ||||||||    
T  17137854 tagtggttagaattcacgtttttcaaggtgaataagtggagtgtcgggggttcgaaccccgatccctgcatataataatgcatg 17137937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 595
Target Start/End: Complemental strand, 31907741 - 31907662
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    |||||||||||||||||||||  |||||| | || || |   |||||| |||||||||||||||||||||||| ||||||    
T  31907741 tttttcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcatataacaatgcatgtccctgcaaactga 31907662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 537
Target Start/End: Complemental strand, 40384360 - 40384321
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  40384360 ttagtggctagaattcaccttttttaaggtgaataagtgg 40384321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 609
Target Start/End: Complemental strand, 19608716 - 19608610
Alignment:
Q  504 gctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagc 602  Q
    |||| ||||||  ||||| |||||||||||||| | ||| |||  ||||| | |||||||| |||||||| ||||||| | |||  ||||||||||| ||    
T  19608716 gctagaattcattttttttaaggtgaataagtgaagtgtccggagttcgaaccccgacccctgcatataataatgcatattcctatcaactgagctatgc 19608617  T
Q  603 tcatggg 609  Q
    |||||||    
T  19608616 tcatggg 19608610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 537
Target Start/End: Original strand, 22687868 - 22687906
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||| || |||||||||||||||||||||||||||||    
T  22687868 tagtggttagaattcacctttttcaaggtgaataagtgg 22687906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 610
Target Start/End: Original strand, 36742012 - 36742066
Alignment:
Q  556 ccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggga 610  Q
    |||| ||| |||||||||||| |||||| ||||||||||||||| ||||| ||||    
T  36742012 ccgatccctgcatataacaattcatgtctctgccaactgagctatgctcacggga 36742066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 1463952 - 1463871
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  1463952 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 1463871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 599
Target Start/End: Original strand, 3102155 - 3102216
Alignment:
Q  539 tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagcta 599  Q
    |||||||| ||||| | ||||| ||  ||||||||||||||| |||||||||||||||||||    
T  3102155 tgttcggggttcgaaccccgactcctacatataacaatgcattgtccctgccaactgagcta 3102216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Original strand, 4674829 - 4674910
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||| ||||||||||| |||||    
T  4674829 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactgagctatgctca 4674910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 599
Target Start/End: Complemental strand, 9963463 - 9963422
Alignment:
Q  559 accccggcatataacaatgcat-gtccctgccaactgagcta 599  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  9963463 acccctgcatataacaatgcattgtccctgccaactgagcta 9963422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 18536034 - 18535985
Alignment:
Q  488 ggtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtg 536  Q
    |||||||||||| ||||| || ||||||| ||||||||||||||||||||    
T  18536034 ggtcaagtagtttagtggttagaattcacttttttcaaggtgaataagtg 18535985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 612
Target Start/End: Original strand, 37417178 - 37417231
Alignment:
Q  560 ccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaac 612  Q
    |||| |||||||| |||| || ||||||||||||||||||||||||| ||||||    
T  37417178 cccctgcatataataatgtattgtccctgccaactgagctaagctcacgggaac 37417231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 606
Target Start/End: Complemental strand, 41539422 - 41539316
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||| ||| ||||||||||||||||| | ||||||| || |||  ||| ||||| || | ||||| ||||||||  |||||||||||  ||||||||||    
T  41539422 tagtgactagaattcacctttttcaagattaataagtggggtgtctggggttcgaactacaacccctgcatataattatgcatgtccc--ccaactgagc 41539325  T
Q  598 taagctcat 606  Q
    || ||||||    
T  41539324 tatgctcat 41539316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 582
Target Start/End: Original strand, 42260706 - 42260791
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgt 582  Q
    ||||| |||| |||||| |||||| ||||||||||||| |||||| |||  |||||   |||| ||| ||||||||||||||||||    
T  42260706 ttagtagctagaattcatctttttaaaggtgaataagtgggatgtccggagttcgaaacccgaaccctgcatataacaatgcatgt 42260791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 599
Target Start/End: Original strand, 17178278 - 17178310
Alignment:
Q  567 atataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||||||||||||||||| |||||||||||    
T  17178278 atataacaatgcatgtccctgtcaactgagcta 17178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 29096297 - 29096402
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| ||||| |||  |||||||| |||||||   ||| ||||||||||    
T  29096297 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaactccggcccttgcatataataatgcattgtcctaccaactgagc 29096394  T
Q  598 taagctca 605  Q
    || |||||    
T  29096395 tatgctca 29096402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 599
Target Start/End: Original strand, 31280602 - 31280634
Alignment:
Q  567 atataacaatgcatgtccctgccaactgagcta 599  Q
    |||||| ||||||||||||||||||||||||||    
T  31280602 atataataatgcatgtccctgccaactgagcta 31280634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 537
Target Start/End: Complemental strand, 39955099 - 39955071
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||||||||||||||||||||||    
T  39955099 aattcacctttttcaaggtgaataagtgg 39955071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 20610847 - 20610740
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||| |||  ||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  20610847 tagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagc 20610748  T
Q  598 taagctca 605  Q
    || |||||    
T  20610747 tatgctca 20610740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 491 - 596
Target Start/End: Original strand, 12585537 - 12585644
Alignment:
Q  491 caagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgc 588  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| | |||||||| ||||| ||||| |||   |||||||||||||||||||||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggcccttacatataacaatgcatgtccctgc 12585636  T
Q  589 caactgag 596  Q
    ||||||||    
T  12585637 caactgag 12585644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 49039432 - 49039539
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| |||| ||||| | ||   ||| |||||||||||||||||||||||||||||||||    
T  49039432 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgccaactgagc 49039531  T
Q  598 taagctca 605  Q
    || |||||    
T  49039532 tatgctca 49039539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 54854155 - 54854273
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| | ||  |||| ||||||||  ||||||||||||    
T  54854155 gtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtccct 54854254  T
Q  587 gccaactgagctaagctca 605  Q
    ||||||||||||| |||||    
T  54854255 gccaactgagctatgctca 54854273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 49319502 - 49319394
Alignment:
Q  499 tagtggctataattcaccttttt-caaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||| |||| || || | |||||||| |||||||| ||||||||||| |||||||||||    
T  49319502 tagtggctataattcaccttttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaactgag 49319403  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  49319402 ctatgctca 49319394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 33076637 - 33076526
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||||||||| |||||| ||||||||||||| || ||| |||| ||||| | |||||||| |||||||| ||||||||||||  ||||||||||    
T  33076637 tagtggctataattcatcttttt-aaggtgaataagtagggtgtccggggttcgaaccccgacccctgcatataataatgcatgtccc--ccaactgagc 33076541  T
Q  598 taagctcatgggaac 612  Q
    || ||||| ||||||    
T  33076540 tatgctcacgggaac 33076526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 41492486 - 41492592
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||| |||||||||  ||| | |||| ||| | ||| |||| |||||||| ||||||||||||||||||||||||    
T  41492486 tagtggctagaattcacctttttcaaggtaaataagtggggtgtccaggtt-cgaaccccggcccctgcatataataatgcatgtccctgccaactgagc 41492584  T
Q  598 taagctca 605  Q
    || |||||    
T  41492585 tatgctca 41492592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 593
Target Start/End: Original strand, 23226681 - 23226787
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||| |||  ||||| | || || || ||||||||||||||||||||||    
T  23226681 gtcaagtagtatagtggctataattcacattttttaaggtgaataagtgagatgtccggtgttcgaaccccaactcctgcatataacaatgcatgtccct 23226780  T
Q  587 gccaact 593  Q
    | |||||    
T  23226781 gtcaact 23226787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 24039989 - 24039889
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaa 600  Q
    |||||| |||||||||||||||||||||||||||| | |||||||| ||||| | |||||||   ||||||||||||||||| |||| |||||||||||     
T  24039989 tggctagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaaccccgaccc---catataacaatgcatgt-cctgtcaactgagctat 24039894  T
Q  601 gctca 605  Q
    |||||    
T  24039893 gctca 24039889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 36008382 - 36008275
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactga 595  Q
    |||||||||| |||||||||| |  |||||||||||||||  |||||||| ||||| | ||| |||| |||||||||||||||| |||||||||||||||    
T  36008382 ttagtggctagaattcaccttat--aaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactga 36008285  T
Q  596 gctaagctca 605  Q
    |||| |||||    
T  36008284 gctatgctca 36008275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 33359925 - 33359818
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||||||||||||||||||||||  ||| | || ||||| |  ||||||  ||||||||||||| |||||| || |||||||||    
T  33359925 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgacccttgcatataacaatgaatgtccatgtcaactgagc 33359826  T
Q  598 taagctca 605  Q
    || |||||    
T  33359825 tatgctca 33359818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 27922004 - 27921890
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||| ||||| ||| |||||||||| |||||  ||| ||||| | ||| |||| |||||||| ||||||||||||| ||||||||||    
T  27922004 tagtggttagaattcacattttttaagatgaataagtgagatgtctggggttcgaaccccggcccctgcatataataatgcatgtccctaccaactgagc 27921905  T
Q  598 taagctcatgggaac 612  Q
    || ||||| ||||||    
T  27921904 tatgctcacgggaac 27921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 605
Target Start/End: Original strand, 56865 - 56954
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||||||| |||  |||||||  ||||| ||||| |||  |||||||||||||||||||||||||||||||| || |||||    
T  56865 tttttcaaggtgaataaatggggtgttcggagttcgaactccggcccttgcatataacaatgcatgtccctgccaactgagttatgctca 56954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 21023339 - 21023439
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||||||||||||||||||||||| || |||  ||| ||||| | || ||||||| ||||||||||||||||  |||||||||||||    
T  21023339 tagtggttagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaaccccaaccccgg-atataacaatgcatgtttctgccaactgagc 21023437  T
Q  598 ta 599  Q
    ||    
T  21023438 ta 21023439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 604
Target Start/End: Original strand, 35230271 - 35230388
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||||||||| ||||||||| ||||||||| |||||||||  ||| || | ||||| | |||||||  ||||||| |||||||| |||||    
T  35230271 gtcaagtagtctagtggctaaaattcacctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatgcatatccct 35230370  T
Q  587 gccaactgagctaagctc 604  Q
     |||||||||||| ||||    
T  35230371 accaactgagctatgctc 35230388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 604
Target Start/End: Complemental strand, 49743481 - 49743364
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||| ||||| || ||||||||||||||||||| |||||||| | ||| |||| |||||   ||| |||| |||||||| ||||||| |||||    
T  49743481 gtcaagtagtttagtggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatgcatatccct 49743382  T
Q  587 gccaactgagctaagctc 604  Q
    ||||||||| ||| ||||    
T  49743381 gccaactgaactatgctc 49743364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 605
Target Start/End: Original strand, 1589144 - 1589251
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||| ||||||||||||| ||| ||||||| ||| |||| |||| |||||   | |||||| ||||||||||||||||||| | ||||||||||    
T  1589144 ttagtggctagaattcaccttttt-aagatgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatgcatgtcaccgccaactgag 1589242  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  1589243 ctatgctca 1589251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 539 - 605
Target Start/End: Complemental strand, 2565328 - 2565261
Alignment:
Q  539 tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctca 605  Q
    |||||||| ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||| |||||    
T  2565328 tgttcgggattcgaactccgacccctgcatataacaatgcattgtccctgtcaactgagctatgctca 2565261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 42758151 - 42758257
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||||||||| |||||| |||||||||||||||  ||| | || ||||| | ||| |||| |||||||| ||||||||||||| | ||||||||    
T  42758151 tagtggctataattcatctttttgaaggtgaataagtggggtgtccagggttcgaac-ccggcccctgcatataataatgcatgtccctacaaactgagc 42758249  T
Q  598 taagctca 605  Q
    || |||||    
T  42758250 tatgctca 42758257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 610
Target Start/End: Complemental strand, 54265035 - 54264924
Alignment:
Q  500 agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 598  Q
    |||||||| |||||| ||||||||||||||||||||| | |||||| | || || | | ||||||  |||||||||||||||||  |||||| |||||||    
T  54265035 agtggctagaattcatctttttcaaggtgaataagtgaggtgttcgaggtttgaaccctgacccctacatataacaatgcatgtttctgccagctgagct 54264936  T
Q  599 aagctcatggga 610  Q
    | ||||| ||||    
T  54264935 atgctcacggga 54264924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 596
Target Start/End: Original strand, 18740921 - 18741002
Alignment:
Q  517 tttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||||||||||||||   |||| ||| ||||| |||||||||| |||||||| ||||||| || ||||||||||||    
T  18740921 tttttcaaggtgaataagtgggggtgtttggggttcgaactccgacccctgcatataataatgcatatctctgccaactgag 18741002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 556 - 608
Target Start/End: Complemental strand, 9084809 - 9084756
Alignment:
Q  556 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgg 608  Q
    |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  9084809 ccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcatgg 9084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 20166362 - 20166317
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  20166362 cccctgcatataacaatgcatgtccctgccaactgagctacgctca 20166317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 4419662 - 4419780
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||| || || ||||||| ||||||||||||||||| || | ||||| || || || | ||| |||| ||||||||||||||||||| ||    
T  4419662 gtcaagtagtgtagcggttagaattcacttttttcaaggtgaataaatgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtctct 4419761  T
Q  587 gccaactgagctaagctca 605  Q
    | |||||||| || |||||    
T  4419762 gacaactgagttatgctca 4419780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 609
Target Start/End: Complemental strand, 21664186 - 21664076
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 598  Q
    |||||| || ||||||||||| ||||| |||||||||||||||  ||| ||||| |  |  |||| ||||||||  || ||| ||||| |||||||||||    
T  21664186 tagtggttagaattcacctttctcaagatgaataagtggatgtctgggattcgaacctcagcccctgcatataattatacatatccctaccaactgagct 21664087  T
Q  599 aagctcatggg 609  Q
    | |||||||||    
T  21664086 atgctcatggg 21664076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 609
Target Start/End: Complemental strand, 21672950 - 21672840
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 598  Q
    |||||| || ||||||||||| ||||| |||||||||||||||  ||| ||||| |  |  |||| ||||||||  || ||| ||||| |||||||||||    
T  21672950 tagtggttagaattcacctttctcaagatgaataagtggatgtctgggattcgaacctcagcccctgcatataattatacatatccctaccaactgagct 21672851  T
Q  599 aagctcatggg 609  Q
    | |||||||||    
T  21672850 atgctcatggg 21672840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 12820394 - 12820500
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| | || ||| | | |||||||| ||||||||||||||| |||| ||||||||||||    
T  12820394 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccagggttctaaccccgacccctgcatataacaatgcattgtctctgccaactgag 12820491  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  12820492 ctatgctca 12820500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 31480377 - 31480264
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 596  Q
    |||||| || ||||||| ||||  |||||||||||||||  |||||||| |||||  | |  |||| |||||||||||||||| ||||||||||||||||    
T  31480377 tagtggttagaattcacgtttt--aaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatgcattgtccctgccaactgag 31480280  T
Q  597 ctaagctcatgggaac 612  Q
    ||| | ||||| ||||    
T  31480279 ctatgttcatgagaac 31480264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 597
Target Start/End: Complemental strand, 38657581 - 38657549
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||||||||||||||||||||||||||    
T  38657581 gcatataacaatgcatgtccctgccaactgagc 38657549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 51077974 - 51077875
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||| || | |||||||||||||||  |||||| | ||||| |||||||||| |||||||| |||||||   ||| ||||||||||    
T  51077974 tagtggctagaattcacccttat-aaggtgaataagtggggtgttcgagattcgaactccgacccctgcatataataatgcattgtcctaccaactgagc 51077876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 615
Target Start/End: Complemental strand, 52031257 - 52031197
Alignment:
Q  556 ccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaacttg 615  Q
    |||||||| |||||||  ||||||| || |||||||||||||||||||||| |||||||||    
T  52031257 ccgacccctgcatatactaatgcattgttcctgccaactgagctaagctcacgggaacttg 52031197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 15185186 - 15185079
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||| | |||||||||| |||| ||| || ||| | || ||| | | |||||||| |||||||||||||||| ||||||||||| || |    
T  15185186 tagtggctaaaattctcttttttcaaggagaatgagtagggtgtccaggattcaaaccccgacccctgcatataacaatgcatatccctgccaaccgaac 15185087  T
Q  598 taagctca 605  Q
    || |||||    
T  15185086 tatgctca 15185079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 615
Target Start/End: Original strand, 28520745 - 28520836
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctcatgggaacttg 615  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| ||||| ||| |||||    
T  28520745 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacttg 28520836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 565 - 596
Target Start/End: Complemental strand, 42432049 - 42432018
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||||||||||||||||||||||||||    
T  42432049 gcatataacaatgcatgtccctgccaactgag 42432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 613
Target Start/End: Complemental strand, 31852379 - 31852345
Alignment:
Q  579 atgtccctgccaactgagctaagctcatgggaact 613  Q
    ||||||||||||||||||||||||||| |||||||    
T  31852379 atgtccctgccaactgagctaagctcacgggaact 31852345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 605
Target Start/End: Complemental strand, 36045877 - 36045831
Alignment:
Q  559 accccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| ||||||||||||||||||||||| ||| ||||||| |||||    
T  36045877 acccctgcatataacaatgcatgtccctgtcaattgagctatgctca 36045831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 48512245 - 48512199
Alignment:
Q  560 ccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||    
T  48512245 cccctgcatataacaatgcattgtccctgccaactgagctatgctca 48512199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 599
Target Start/End: Original strand, 52556669 - 52556763
Alignment:
Q  506 tataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||||||| | ||||| |||| ||||||||||| ||||||   ||||| | |||||||| ||||||||||||| |||| |||  |||||||||||    
T  52556669 tataattctcattttttaaggagaataagtggagtgttcgatgttcgaaccccgacccctgcatataacaatgtatgttcctatcaactgagcta 52556763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 610
Target Start/End: Original strand, 55266460 - 55266534
Alignment:
Q  536 ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggga 610  Q
    ||||||||||| ||||| |||||||||| |||||||| |||||||    || |||||||||||| ||||| ||||    
T  55266460 ggatgttcgggattcgaactccgacccctgcatataataatgcattgttctaccaactgagctatgctcacggga 55266534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 536
Target Start/End: Complemental strand, 4153282 - 4153245
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg 536  Q
    |||||||||||||| | |||||||||||||||||||||    
T  4153282 tagtggctataatttatctttttcaaggtgaataagtg 4153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 8690295 - 8690214
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | |||||||| |||||||| ||||||| |||| |||||||||||||| |||||    
T  8690295 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccttgccaactgagctatgctca 8690214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 606
Target Start/End: Complemental strand, 17431418 - 17431377
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctcat 606  Q
    ||||||||||||||||||||||| |||||||| || ||||||    
T  17431418 gcatataacaatgcatgtccctgtcaactgagttatgctcat 17431377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 610
Target Start/End: Original strand, 20753114 - 20753224
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||| | ||| |||| ||||| | ||| ||||  ||||||| ||||||| | ||| ||||||||||    
T  20753114 tagtggctagaattcaccttat--aaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataatgcattttcctaccaactgagc 20753211  T
Q  598 taagctcatggga 610  Q
    || ||||| ||||    
T  20753212 tatgctcacggga 20753224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 605
Target Start/End: Complemental strand, 29785240 - 29785151
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||||||||||  ||| |||| ||||| | ||  ||||  ||||| ||| || ||||||||||||||||||||| |||||    
T  29785240 tttttcaaggtgaataagtggggtgtccggggttcgaaccccagcccctacatattacagtgtatgtccctgccaactgagctatgctca 29785151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 32885795 - 32885689
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||| || |||||||||| |  |||||||||||||||  ||| || | ||||| |||||||||| |||||||| |||||||   ||| |||||||||    
T  32885795 ttagtggatagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcctaccaactgag 32885698  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  32885697 ctatgctca 32885689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 610
Target Start/End: Original strand, 43049987 - 43050032
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctcatggga 610  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||||    
T  43049987 gcatataacaatgcatgttcctgtcaactgagctatgctcacggga 43050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 566 - 615
Target Start/End: Original strand, 44449522 - 44449571
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagctaagctcatgggaacttg 615  Q
    ||||||||||||||||| ||||| ||||||| || ||||| |||||||||    
T  44449522 catataacaatgcatgttcctgctaactgagttatgctcacgggaacttg 44449571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 17859884 - 17859779
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||| | |||||||| ||||| ||||| ||||  | ||||| |||||||   ||| ||||||||||    
T  17859884 tagtggctagaattcaccttat--aaggtgaataagtgaggtgttcggggttcgaactccggcccctacgtataataatgcattgtcctaccaactgagc 17859787  T
Q  598 taagctca 605  Q
    || |||||    
T  17859786 tatgctca 17859779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 612
Target Start/End: Complemental strand, 32887237 - 32887125
Alignment:
Q  501 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||| ||||||| ||||||||| | |||||||||  ||| |||  ||||| |  |||| ||||||||||| |||| | ||||||| |||||||||||    
T  32887237 gtggctaaaattcacatttttcaagattaataagtggggtgtccggagttcgaaccacgactccggcatataaaaatgtacgtccctgtcaactgagcta 32887138  T
Q  600 agctcatgggaac 612  Q
     | ||| ||||||    
T  32887137 tgatcacgggaac 32887125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 36257800 - 36257695
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||| ||||  || ||||||||||||  ||| |||| ||||| | ||| |||| ||||| || | ||| ||||||||||||||||||    
T  36257800 tagtggctagaattcacttttt--aaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatacaatactgcttgtccctgccaactgagc 36257703  T
Q  598 taagctca 605  Q
    || |||||    
T  36257702 tatgctca 36257695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 613
Target Start/End: Complemental strand, 40261221 - 40261177
Alignment:
Q  569 ataacaatgcatgtccctgccaactgagctaagctcatgggaact 613  Q
    |||| ||||||||||||||| |||||||||| ||||| |||||||    
T  40261221 ataataatgcatgtccctgctaactgagctatgctcacgggaact 40261177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 612
Target Start/End: Original strand, 220337 - 220463
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  220337 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 220436  T
Q  586 tgccaactgagctaagctcatgggaac 612  Q
    |||||||||||||| ||||| ||||||    
T  220437 tgccaactgagctatgctcacgggaac 220463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 612
Target Start/End: Original strand, 689492 - 689618
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  689492 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 689591  T
Q  586 tgccaactgagctaagctcatgggaac 612  Q
    |||||||||||||| ||||| ||||||    
T  689592 tgccaactgagctatgctcacgggaac 689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 612
Target Start/End: Original strand, 733960 - 734086
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  733960 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 734059  T
Q  586 tgccaactgagctaagctcatgggaac 612  Q
    |||||||||||||| ||||| ||||||    
T  734060 tgccaactgagctatgctcacgggaac 734086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 612
Target Start/End: Original strand, 857856 - 857982
Alignment:
Q  488 ggtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||  ||| |||| ||||| | | |||| | |||||||||| ||||||||||    
T  857856 ggtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccc 857955  T
Q  586 tgccaactgagctaagctcatgggaac 612  Q
    |||||||||||||| ||||| ||||||    
T  857956 tgccaactgagctatgctcacgggaac 857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 612
Target Start/End: Original strand, 216145 - 216248
Alignment:
Q  510 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  216145 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 216244  T
Q  609 gaac 612  Q
    ||||    
T  216245 gaac 216248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 612
Target Start/End: Original strand, 692705 - 692808
Alignment:
Q  510 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  692705 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 692804  T
Q  609 gaac 612  Q
    ||||    
T  692805 gaac 692808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 612
Target Start/End: Original strand, 696914 - 697017
Alignment:
Q  510 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  696914 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 697013  T
Q  609 gaac 612  Q
    ||||    
T  697014 gaac 697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 612
Target Start/End: Original strand, 729768 - 729871
Alignment:
Q  510 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  729768 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 729867  T
Q  609 gaac 612  Q
    ||||    
T  729868 gaac 729871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 510 - 612
Target Start/End: Original strand, 853663 - 853766
Alignment:
Q  510 attcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    ||||||||||||||||||||||||||| | ||| || | ||||| | | |||| | ||||||||||||| ||||||||||||||||||||| ||||| ||    
T  853663 attcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgg 853762  T
Q  609 gaac 612  Q
    ||||    
T  853763 gaac 853766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 14011025 - 14011132
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||| ||||| ||| ||||||||||| |||| || | ||||| ||||| |||| ||||||||||||||||||||||||||||||| |    
T  14011025 tagtggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaactccggcccctgcatataacaatgcatgtccctgccaactgaac 14011124  T
Q  598 taagctca 605  Q
    || |||||    
T  14011125 tatgctca 14011132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 593
Target Start/End: Original strand, 22847250 - 22847344
Alignment:
Q  500 agtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 593  Q
    |||||||| ||||||||||||| |||||||||||||| | |||  ||| ||||| |  ||||||| |||||||||||||||||||||||||||||    
T  22847250 agtggctagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatgcatgtccctgccaact 22847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 512 - 605
Target Start/End: Complemental strand, 18577208 - 18577114
Alignment:
Q  512 tcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||||||||||||||| | |||| ||| || || | |||||||| |||||||||||| |||||||||| |||||||| || |||||    
T  18577208 tcacctttttcaaggtgaataagtgaaatgtttggggtttgaaccccgacccctgcatataacaatacatgtccctgtcaactgagttatgctca 18577114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 593
Target Start/End: Original strand, 26773699 - 26773784
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 593  Q
    ||||||| ||||| ||| |||||||||||| |||||||| ||||| |||||||| | ||||||||||||||||| ||||| |||||    
T  26773699 aattcacattttttaagatgaataagtggaatgttcggggttcgaactccgacctctgcatataacaatgcatgcccctgtcaact 26773784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 605
Target Start/End: Complemental strand, 28979128 - 28979027
Alignment:
Q  505 ctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagct 603  Q
    ||||||||||| ||||| |||||||||||||| | ||| |||| |||||  |||||||||  |||||||||||||||||||||  ||||||| ||| |||    
T  28979128 ctataattcacattttttaaggtgaataagtgaggtgtccggggttcgaattccgacccctacatataacaatgcatgtccctatcaactgaactatgct 28979029  T
Q  604 ca 605  Q
    ||    
T  28979028 ca 28979027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 509 - 612
Target Start/End: Complemental strand, 7345526 - 7345422
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatg 607  Q
    ||||||||||||| |||||||||||||||  |||| ||  || ||   |||||||| |||||||| ||||||||||||||||||||||| || ||||| |    
T  7345526 aattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtccctgccaactgagttatgctcacg 7345427  T
Q  608 ggaac 612  Q
    |||||    
T  7345426 ggaac 7345422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 26657975 - 26657857
Alignment:
Q  489 gtcaagtag-ttagtggctataattcacctttttcaaggtgaataagtgga--tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    ||||||||| |||||||||  ||||||| |||||||||||||||||||||   |||  ||| ||||| | |||  ||| |||||||||||||||||||||    
T  26657975 gtcaagtagcttagtggcttgaattcac-tttttcaaggtgaataagtgggggtgtctggggttcgaaccccggtccctgcatataacaatgcatgtccc 26657877  T
Q  586 tgccaactgagctaagctca 605  Q
    | |||||||||||| |||||    
T  26657876 taccaactgagctatgctca 26657857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 608
Target Start/End: Complemental strand, 12560150 - 12560030
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| || |||||| |||| |||||||||||||| |||||||| | |||| | | ||||| | || ||||| |||||||||||||  ||| |||    
T  12560150 gtcaagtagtctaatggctagaattgacctttttcaaggtaaataagtgaggtgtttgaggttcgaaccccaacccctgcatataacaatg-ttgttcct 12560052  T
Q  587 gccaactgagctaagctcatgg 608  Q
    ||||||||||||| ||||||||    
T  12560051 gccaactgagctatgctcatgg 12560030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 587
Target Start/End: Original strand, 44254299 - 44254388
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctg 587  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||| | |  ||||| | ||||| || |||||||| ||||||||||||||    
T  44254299 tagtggctaaaattcacatttttcaaggtgaataagtaggatgtccagagttcgaaccccgactcccgcatataataatgcatgtccctg 44254388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 32940351 - 32940402
Alignment:
Q  548 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||| |||||||||| | ||||||||||||||||||||| |||||||||||    
T  32940351 ttcgaactccgacccctgtatataacaatgcatgtccctgtcaactgagcta 32940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 559 - 605
Target Start/End: Original strand, 39432376 - 39432422
Alignment:
Q  559 accccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||    
T  39432376 acccctgcatataacattgcatgtccctgccaactgagctatgctca 39432422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 599
Target Start/End: Complemental strand, 11900674 - 11900573
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||| ||||||||||||||||| |||||||||||    || |  ||| | |  | ||||| |||||||| ||||||||| ||||||||||||||    
T  11900674 ttagtggctagaattcacctttttcaagatgaataagtggggtatctgtgttcaaacctcaacccctgcatataataatgcatgttcctgccaactgagc 11900575  T
Q  598 ta 599  Q
    ||    
T  11900574 ta 11900573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 559 - 612
Target Start/End: Original strand, 16808409 - 16808462
Alignment:
Q  559 accccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 612  Q
    ||||| |||||||| ||||||||||||||| ||||||| || ||||||||||||    
T  16808409 acccctgcatataataatgcatgtccctgctaactgagttatgctcatgggaac 16808462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 605
Target Start/End: Complemental strand, 29937268 - 29937211
Alignment:
Q  548 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| ||||| |||| |||||||||||| ||||||||| |||||||||||| |||||    
T  29937268 ttcgaactccggcccctgcatataacaatacatgtccctaccaactgagctatgctca 29937211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 574313 - 574257
Alignment:
Q  518 ttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataaca 574  Q
    |||||||||||||||||||| ||| |||| ||||| | |||||||| ||||||||||    
T  574313 ttttcaaggtgaataagtgggtgtccggggttcgaaccccgacccctgcatataaca 574257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 592
Target Start/End: Complemental strand, 30542870 - 30542777
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaac 592  Q
    |||||| || |||||||||| |  ||||||||||| |||| |||||||| ||||| | |||| ||| ||||||||||||||| |||||||||||||    
T  30542870 tagtggttagaattcaccttat--aaggtgaataaatggaatgttcggggttcgaaccccgatccctgcatataacaatgcattgtccctgccaac 30542777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 536
Target Start/End: Original strand, 39208845 - 39208893
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg 536  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  39208845 gtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtg 39208893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 19925096 - 19925163
Alignment:
Q  509 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaa 575  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||| | ||||||||  ||||||||||    
T  19925096 aattcaccttttttaaggtgaataagtgaggtgttcgggattcgaaccccgacccctacatataacaa 19925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 25470833 - 25470940
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |||||||||||||| | || ||| || | ||||| | |||||||  | |||||| ||||||||| |||| ||||||||     
T  25470833 tagtggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaaccccgacccatgaatataataatgcatgttcctgtcaactgagt 25470932  T
Q  598 taagctca 605  Q
    || |||||    
T  25470933 tatgctca 25470940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 537
Target Start/End: Complemental strand, 6325377 - 6325339
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  6325377 tagtggctagaattcacctttttcaaggtgaatgagtgg 6325339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 14012719 - 14012612
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactga 595  Q
    |||||||||| |||||||||| |  || ||||||||||||  ||| |||  ||||| | ||| |||| |||||||||||||||| |||||||||||||||    
T  14012719 ttagtggctaaaattcaccttat--aatgtgaataagtggggtgtccggacttcgaaccccggcccctgcatataacaatgcattgtccctgccaactga 14012622  T
Q  596 gctaagctca 605  Q
     ||| |||||    
T  14012621 actatgctca 14012612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 17987438 - 17987537
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||||||||||||| |  ||||||||||| |||  ||| |||| ||||| ||||| |||| |||||||| |||||||   ||| ||||||||||    
T  17987438 tagtggctataattcaccttat--aaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataatgcattatcctaccaactgagc 17987535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 536
Target Start/End: Original strand, 27821891 - 27821929
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtg 536  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  27821891 ttagtggctagaattcaccttttttaaggtgaataagtg 27821929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 2800100 - 2800019
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||||  ||| |||| ||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  2800100 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctca 2800019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 610
Target Start/End: Original strand, 43468694 - 43468804
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||  ||||| | ||||||||  |||||||||||||||   ||| ||||||||||    
T  43468694 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcattgtcctaccaactgagc 43468791  T
Q  598 taagctcatggga 610  Q
    || ||||| ||||    
T  43468792 tatgctcacggga 43468804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 498 - 593
Target Start/End: Complemental strand, 30500576 - 30500481
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 593  Q
    |||||||||| ||||||  |||||||| |||||||||||||| || |||  ||||| | || |||||  ||||||| |||||||||| |||||||||    
T  30500576 ttagtggctagaattcat-tttttcaatgtgaataagtggatggtccggagttcgaaccccaacccctacatataataatgcatgtctctgccaact 30500481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 599
Target Start/End: Original strand, 35301208 - 35301252
Alignment:
Q  556 ccgaccccggcatataacaatgcat-gtccctgccaactgagcta 599  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||    
T  35301208 ccgacccctgcatataataatgcattgtccctgccaactgagcta 35301252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 599
Target Start/End: Complemental strand, 36593233 - 36593201
Alignment:
Q  567 atataacaatgcatgtccctgccaactgagcta 599  Q
    |||||||||||||||||||| ||||||||||||    
T  36593233 atataacaatgcatgtccctaccaactgagcta 36593201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 608
Target Start/End: Original strand, 39208910 - 39208958
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctcatgg 608  Q
    |||| |||||||| ||||||||||||||| ||||||||||  |||||||    
T  39208910 cccctgcatataataatgcatgtccctgcaaactgagctagactcatgg 39208958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 10020456 - 10020557
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtggat-gttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||||||||||||| ||||||||||| | ||||||| ||||| | || ||||| ||||||||||||||||||||||| |||||||||    
T  10020456 tagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtccctgtcaactgagc 10020555  T
Q  598 ta 599  Q
    ||    
T  10020556 ta 10020557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 7392282 - 7392400
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||| || |||||||| ||| | | || ||| | |||||||||||||||||| |||    
T  7392282 gtcaagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgttcct 7392381  T
Q  587 gccaactgagctaagctca 605  Q
    ||||| ||||||| |||||    
T  7392382 gccaattgagctatgctca 7392400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 498 - 599
Target Start/End: Complemental strand, 35195952 - 35195850
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||| ||| || |||||||||||||||||||||| |||  |||||||| ||||| | ||| |||| |||||||| |||||||||||||||||||||||    
T  35195952 ttagtgactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatgcatgtccctgccaactgag 35195853  T
Q  597 cta 599  Q
    |||    
T  35195852 cta 35195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 610
Target Start/End: Complemental strand, 11808158 - 11808034
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttc-aaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    |||||||||| |||| | || ||||||| |||||| |||||||||||||||  ||| |||| ||||| | |||||||| |||||||||||||||||||||    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccc 11808059  T
Q  586 tgccaactgagctaagctcatggga 610  Q
    | |||| ||||||||||||| ||||    
T  11808058 taccaattgagctaagctcacggga 11808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 44409308 - 44409202
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||||||||||||||||||||||| || |||||||| ||||| | |||||||  |||||||| ||||||||||||||| |||||||     
T  44409308 tagtggttagaattcacctttttcaaggtgaataagtggggtgttcggg-ttcgaaccccgacccttgcatataataatgcatgtccctgctaactgagt 44409210  T
Q  598 taagctca 605  Q
    || |||||    
T  44409209 tatgctca 44409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 605
Target Start/End: Original strand, 41012577 - 41012675
Alignment:
Q  509 aattcacctttttc-aaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||  ||||||||||||||| ||||||||| ||||| ||||| ||||  ||||||||||||||||||||| |||| ||||||| |||||    
T  41012577 aattcacctttttttaaggtgaataagtgggatgttcggggttcgagctccggcccctacatataacaatgcatgtccctaccaattgagctatgctca 41012675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 598
Target Start/End: Complemental strand, 9351130 - 9351042
Alignment:
Q  511 ttcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 598  Q
    ||||| ||||| |||||||||||||||| | |||||| ||||| |||||||||| |||||||| ||| |||||||||| ||||||||||    
T  9351130 ttcactttttttaaggtgaataagtggagttttcggggttcgaactccgacccctgcatataataatacatgtccctgtcaactgagct 9351042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 490 - 592
Target Start/End: Original strand, 32309125 - 32309229
Alignment:
Q  490 tcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctg 587  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||||||| |||  |||  | | ||||| |||||||||| |||||||||||||||||||||||    
T  32309125 tcaagtagtctagtggctagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatgcatgtccctg 32309224  T
Q  588 ccaac 592  Q
    |||||    
T  32309225 ccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 32814947 - 32814828
Alignment:
Q  488 ggtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccc 585  Q
    |||||||||||  ||||| || |||||||||||||  |  |||||||||||  ||| |||| ||||| |||||||||| |||||||| ||||||||||||    
T  32814947 ggtcaagtagtccagtggttaaaattcacctttttttatatgaataagtggggtgtccgggattcgaactccgacccctgcatataataatgcatgtccc 32814848  T
Q  586 tgccaactgagctaagctca 605  Q
    | |||||||||||| |||||    
T  32814847 taccaactgagctatgctca 32814828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 43635707 - 43635589
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||| |||||||| |||||||| |||  |||||||||||||||  ||| |||| ||||| | |||||| | ||||||||||||||||||  ||    
T  43635707 gtcaagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttct 43635608  T
Q  587 gccaactgagctaagctca 605  Q
    |||||||||| || |||||    
T  43635607 gccaactgagttatgctca 43635589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 21285342 - 21285448
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | ||| |||| |||||||||||||||| ||||||||||||||||    
T  21285342 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgag 21285439  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  21285440 ctatgctca 21285448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 1649260 - 1649153
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||| | || ||||| | | | |||| ||||| |||||||||| ||||| ||||||||||    
T  1649260 tagtggctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagc 1649161  T
Q  598 taagctca 605  Q
    || |||||    
T  1649160 tatgctca 1649153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 591
Target Start/End: Original strand, 7162665 - 7162748
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 591  Q
    ||||||||||||||||| |||||||||||| | ||| |  ||||| | |||||||| |||||||||||||||| ||||||||||    
T  7162665 aattcacctttttcaagatgaataagtggaatattcagagttcgaaccccgacccctgcatataacaatgcatatccctgccaa 7162748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 526 - 599
Target Start/End: Original strand, 20527443 - 20527518
Alignment:
Q  526 gtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagcta 599  Q
    ||||||||||| | |||||||| ||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  20527443 gtgaataagtgaggtgttcggggttcgaactccggcccctgcatataacaatgcattgtccctgccaactgagcta 20527518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 498 - 612
Target Start/End: Original strand, 38328553 - 38328667
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||| || |||| |||||||||||||||||||| |||  |||| ||| ||||| |||| |  || ||||||||||||| |||||||| |||| ||||    
T  38328553 ttagtggttagaattaacctttttcaaggtgaataaatggggtgtttggggttcgaactcc-agtcctgcatataacaatgtatgtccctaccaattgag 38328651  T
Q  597 ctaagctcatgggaac 612  Q
    ||| ||||||||||||    
T  38328652 ctatgctcatgggaac 38328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 607
Target Start/End: Original strand, 43712299 - 43712409
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||| ||||| |||||||||||| | ||||||||  | | || | ||||| | |||||||| | |||||||||||||||||||| |||||||||    
T  43712299 ttagtggctagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatgcatgtccctaccaactgag 43712398  T
Q  597 ctaagctcatg 607  Q
     || |||||||    
T  43712399 ttatgctcatg 43712409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 595
Target Start/End: Complemental strand, 1513594 - 1513498
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    ||||||||| ||||||| |||| ||||||||||||||||  |||||||  ||||| |  | |||||  ||||||||||||||||||||||||||||||    
T  1513594 tagtggctaaaattcacatttt-caaggtgaataagtggggtgttcggtgttcgaacctcaacccctacatataacaatgcatgtccctgccaactga 1513498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 565 - 605
Target Start/End: Original strand, 17305444 - 17305484
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  17305444 gcatataacaatgcatgtccctgccaactgagctatgctca 17305484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 509 - 599
Target Start/End: Complemental strand, 16814795 - 16814704
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||| |||||||| ||||||||||||| |||  ||| ||||| | ||||||||  ||||||| ||||||||| | ||||||||||||||    
T  16814795 aattcacatttttcaaagtgaataagtggagtgtctggggttcgaaccccgacccctacatataataatgcatgttcttgccaactgagcta 16814704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 537
Target Start/End: Original strand, 26734258 - 26734296
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  26734258 tagtggctagaattcacctttttcaaggtgaataagtgg 26734296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 596
Target Start/End: Complemental strand, 35498505 - 35498408
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||| |||||||||||||||| |||||||||| || ||| ||   || || | || ||||| |||||||| |||||||||||||||||||||||    
T  35498505 tagtggctagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaac-ccaacccctgcatataataatgcatgtccctgccaactgag 35498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 48175071 - 48174974
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||||| |||||||||||| ||||| ||||||||||  ||| |||| ||||| | ||| |||| | |||||| ||||||||||| ||||||||||||||    
T  48175071 tggctagaattcacctttt-caaggggaataagtggggtgtccggggttcgaacaccggcccctgtatataataatgcatgtccttgccaactgagcta 48174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 612
Target Start/End: Complemental strand, 7465529 - 7465460
Alignment:
Q  543 cgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 612  Q
    |||| ||||| | ||| |||| |||||||| |||||||||| ||||||||||||||| ||||| ||||||    
T  7465529 cggggttcgaaccccggcccctgcatataataatgcatgtctctgccaactgagctatgctcacgggaac 7465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 609
Target Start/End: Original strand, 21877673 - 21877769
Alignment:
Q  513 cacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggg 609  Q
    ||||||||||||| |||||||||||  |||||| | ||||| | || | ||| |||||||||||| ||||| |||||||||| ||||| |||||||||    
T  21877673 cacctttttcaagatgaataagtggggtgttcgaggttcgaacccc-agccctgcatataacaatccatgtacctgccaacttagctatgctcatggg 21877769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 29658261 - 29658367
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | ||| |||| ||||||||||||||| |||| ||||||| ||||    
T  29658261 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcgctgccaattgag 29658358  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  29658359 ctatgctca 29658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 32534630 - 32534683
Alignment:
Q  556 ccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggg 609  Q
    |||||||| ||||||||| ||| |||||||||||||||||| || |||||||||    
T  32534630 ccgacccctgcatataaccatgtatgtccctgccaactgagttatgctcatggg 32534683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 38451969 - 38451863
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  || ||||||||||||  ||| |||| ||||| | ||| |||| |||||||||||||||| ||||||| ||||||||    
T  38451969 tagtggctagaattcaccttat--aatgtgaataagtggggtgtccgggattcgaaccccggcccctgcatataacaatgcattgtccctgtcaactgag 38451872  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  38451871 ctatgctca 38451863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 605
Target Start/End: Complemental strand, 41139168 - 41139087
Alignment:
Q  526 gtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    ||||||||||| | ||| |||| ||||| | |||||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  41139168 gtgaataagtgaagtgtccgggattcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctca 41139087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 586
Target Start/End: Complemental strand, 5773239 - 5773149
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga---tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||| || ||| |||||||||||||||||||||||||    ||| |||| ||||| |  |||||||  |||||||||||||||||||||    
T  5773239 tagtgggtagaatccacctttttcaaggtgaataagtgggatgtgtccggggttcgaacctcgacccctacatataacaatgcatgtccct 5773149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 605
Target Start/End: Original strand, 8147240 - 8147280
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  8147240 gcatataacaatgcatgtccctgccaattgagctatgctca 8147280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 599
Target Start/End: Complemental strand, 19924874 - 19924774
Alignment:
Q  500 agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 598  Q
    |||||||| ||||||| ||||| |||||||||||||||  | |  ||| ||||| |||  ||  | |||||||| |||||||||||||||||||||||||    
T  19924874 agtggctagaattcactttttttaaggtgaataagtggggtatatgggattcgaactctcacttctgcatataataatgcatgtccctgccaactgagct 19924775  T
Q  599 a 599  Q
    |    
T  19924774 a 19924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 596
Target Start/End: Complemental strand, 23799350 - 23799310
Alignment:
Q  556 ccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  23799350 ccgacccctgcatataacaatgcatgtctctgccaactgag 23799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 490 - 537
Target Start/End: Original strand, 24579263 - 24579311
Alignment:
Q  490 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||    
T  24579263 tcaagtagtttagtggatagaattcacctttttcaaggtgaataagtgg 24579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 25304275 - 25304179
Alignment:
Q  509 aattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||| ||| || |||||||| |||  | | ||| | |||| ||||| |||||||||||| ||||| |||||||||||| ||| |||||    
T  25304275 aattcaccttttttaagatggataagtgggtgtatgaggttcaaactccaacccctgcatataacaattcatgttcctgccaactgaactacgctca 25304179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 605
Target Start/End: Original strand, 3246541 - 3246580
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  3246541 catataacaatgcatgtccctgtcaactgagctatgctca 3246580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 596
Target Start/End: Complemental strand, 24427456 - 24427373
Alignment:
Q  514 acctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||| ||||||||||||||| |||  | |||||| ||||| |   |||||| ||||||||||||||||||| ||||||||||||    
T  24427456 acctatttcaaggtgaataaatggggtattcggggttcgaaccttgacccctgcatataacaatgcatgtctctgccaactgag 24427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 605
Target Start/End: Original strand, 37410528 - 37410575
Alignment:
Q  558 gaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||| |||||||||||||||||||| | |||||||||||| |||||    
T  37410528 gacccctgcatataacaatgcatgtccttaccaactgagctatgctca 37410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 608
Target Start/End: Complemental strand, 46716439 - 46716331
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||||||||||||||||| |  ||||| |||||||||  ||||| || ||||| | |||||| | |||||||| |||||||   ||| ||||||||||    
T  46716439 tagtggctataattcaccttat--aaggtaaataagtggggtgttcagggttcgaaccccgacctctgcatataataatgcattgtcctaccaactgagc 46716342  T
Q  598 taagctcatgg 608  Q
    || ||||||||    
T  46716341 tatgctcatgg 46716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 14818410 - 14818460
Alignment:
Q  556 ccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctca 605  Q
    |||||||| |||||||| |||||| |||||||||||||||||||| |||||    
T  14818410 ccgacccctgcatataataatgcactgtccctgccaactgagctatgctca 14818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 15265408 - 15265458
Alignment:
Q  556 ccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctca 605  Q
    |||||||| |||||||| |||||| |||||||||||||||||||| |||||    
T  15265408 ccgacccctgcatataataatgcactgtccctgccaactgagctatgctca 15265458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 610
Target Start/End: Complemental strand, 25818393 - 25818282
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||| ||||||||||||||| |  | |||||||||||||| |||||||| ||||| ||||  |||| |||||||| |||||||   ||| |||||||||    
T  25818393 ttagttgctataattcaccttat--atggtgaataagtggagtgttcggggttcgaactccagcccctgcatataataatgcattatcctaccaactgag 25818296  T
Q  597 ctaagctcatggga 610  Q
     || ||||| ||||    
T  25818295 ttatgctcacggga 25818282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 546
Target Start/End: Original strand, 28968680 - 28968718
Alignment:
Q  509 aattcacctttttcaaggtgaataagtg-gatgttcggg 546  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28968680 aattcacctttttcaaggtgaataagtgagatgttcggg 28968718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 579
Target Start/End: Original strand, 41853511 - 41853593
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgca 579  Q
    |||| ||||| ||||| |||||||||||| |||||||| || | |||||| ||||| ||||| || | |||||||||||||||    
T  41853511 ttaggggctagaattctcctttttcaaggagaataagtggggtattcggggttcgaactccggcctctgcatataacaatgca 41853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 554 - 596
Target Start/End: Complemental strand, 43209453 - 43209411
Alignment:
Q  554 ctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||| |||| |||||||||||||||||| |||||||||||||    
T  43209453 ctccggcccctgcatataacaatgcatgttcctgccaactgag 43209411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 30152848 - 30152742
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||| |||||| ||| |  |||||||||||||||  |||||||| ||||| | ||||||||   |||||| |||||||   ||| |||||||||    
T  30152848 ttagtggctagaattcatcttat--aaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcctaccaactgag 30152751  T
Q  597 ctaagctca 605  Q
    |||||||||    
T  30152750 ctaagctca 30152742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 612
Target Start/End: Original strand, 31475889 - 31475942
Alignment:
Q  560 ccccggcatataacaatgca-tgtccctgccaactgagctaagctcatgggaac 612  Q
    |||| |||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  31475889 cccctgcatataataatgcaatgtccctgccaactgagctatgctcacgggaac 31475942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 596
Target Start/End: Original strand, 38032911 - 38032940
Alignment:
Q  567 atataacaatgcatgtccctgccaactgag 596  Q
    ||||||||||||||||||||||||||||||    
T  38032911 atataacaatgcatgtccctgccaactgag 38032940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 605
Target Start/End: Original strand, 10474518 - 10474606
Alignment:
Q  518 ttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||||| | ||| ||||  |||| | |||||||| ||||||||||||| ||||| || |||||||| ||| |||||    
T  10474518 tttttaaggtgaataagtgaggtgtccgggggtcgaaccccgacccctgcatataacaatgtatgtctctaccaactgaactatgctca 10474606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 612
Target Start/End: Original strand, 14772341 - 14772436
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 612  Q
    ||||| ||||||||| || ||| ||||||||||| || | ||| ||||  ||| |||||||||||||| |||||||||||| || ||||| ||||||    
T  14772341 ttttttaaggtgaatcagcggagtgttcgggttt-gaaccccggcccctacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaac 14772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 612
Target Start/End: Original strand, 15222793 - 15222888
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaac 612  Q
    ||||| ||||||||| || ||| ||||||||||| || | ||| ||||  ||| |||||||||||||| |||||||||||| || ||||| ||||||    
T  15222793 ttttttaaggtgaatcagcggagtgttcgggttt-gaaccccggcccctacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaac 15222888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 1244677 - 1244570
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||||||||||| || ||| |||| ||||| | || ||||| ||||||| ||||| ||||||||||||||||| |    
T  1244677 tagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaactgaac 1244578  T
Q  598 taagctca 605  Q
    || |||||    
T  1244577 tatgctca 1244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 597
Target Start/End: Original strand, 14307680 - 14307780
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||| ||||||| ||||| || ||||||||||||  |||||||| ||||| |  ||||||| |||||||||||||||||||||| |||||||||    
T  14307680 ttagtggctagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtccctaccaactgag 14307779  T
Q  597 c 597  Q
    |    
T  14307780 c 14307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 599
Target Start/End: Original strand, 44487752 - 44487855
Alignment:
Q  497 gttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    |||||||| || ||||||||||||| ||||||||||||| |||||| |||| ||||| ||||| |||  |||||||| |||||||||||||  |||||||    
T  44487752 gttagtggttagaattcaccttttttaaggtgaataagtgggatgtccggggttcgaactccggcccttgcatataataatgcatgtccctatcaactga 44487851  T
Q  596 gcta 599  Q
    ||||    
T  44487852 gcta 44487855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 12206606 - 12206505
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataag-tggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||||||||||||||||||||||||  || |||||||| ||||| | |||||||| | |||||| |||| |||| |||||||||| |||    
T  12206606 tagtggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccctgaatataataatgtatgttcctgccaactaagc 12206507  T
Q  598 ta 599  Q
    ||    
T  12206506 ta 12206505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 489 - 612
Target Start/End: Original strand, 39334857 - 39334982
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||  ||  ||||| | ||  |||| | |||||| |||||||||||||    
T  39334857 gtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcatgtccct 39334956  T
Q  587 gccaactgagctaagctcatgggaac 612  Q
    |||||||||| || ||||| ||||||    
T  39334957 gccaactgagttatgctcacgggaac 39334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 39118501 - 39118394
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||| ||||||| |||| ||||||||||  |||||||| ||||| ||| | |||| ||||||||||||| |||||||| |||||||||     
T  39118501 tagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaactctggcccctgcatataacaatgtatgtccctaccaactgagt 39118402  T
Q  598 taagctca 605  Q
    || |||||    
T  39118401 tacgctca 39118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 583
Target Start/End: Original strand, 4529749 - 4529835
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtc 583  Q
    ||||| |||| |||||||||||||||| |||||||||| || |||||||  ||||| |||||||||| |||||||| ||||||||||    
T  4529749 ttagttgctaaaattcacctttttcaaagtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcatgtc 4529835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 11133182 - 11133076
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | |||||||| ||||||||||||||| ||||||| |||||||||    
T  11133182 tagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgag 11133085  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  11133084 ctatgctca 11133076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 586
Target Start/End: Complemental strand, 36413865 - 36413780
Alignment:
Q  502 tggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||| |||||||||||||||| |||||||||| || ||| | || ||||| ||||| |||| ||||||||||||||||||||||    
T  36413865 tggctaaaattcacctttttcaaagtgaataagtggggtgtccagggttcgaactccggcccctgcatataacaatgcatgtccct 36413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 5029087 - 5029194
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || |||||| |||||||||||||||||||| || |||||| | ||||| ||||| || | |||||||| ||||||| | ||| ||||||||||    
T  5029087 tagtgggtagaattcatctttttcaaggtgaataagtggggtgttcgagattcgaactccggcctctgcatataataatgcatatacctaccaactgagc 5029186  T
Q  598 taagctca 605  Q
    || |||||    
T  5029187 tatgctca 5029194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 599
Target Start/End: Complemental strand, 32944160 - 32944069
Alignment:
Q  509 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||| |||||||||||||||||||| | |||||||  || || ||||||  || |||||||| ||||||||||| ||||||||||||||    
T  32944160 aattcacttttttcaaggtgaataagtgaggtgttcggagtttgaactccgattcctgcatataataatgcatgtccatgccaactgagcta 32944069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 34107393 - 34107275
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||| || |||  ||  ||||| |  | ||||| ||||||||  || |||||||||    
T  34107393 gtcaagtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccct 34107294  T
Q  587 gccaactgagctaagctca 605  Q
    ||||||||||||| |||||    
T  34107293 gccaactgagctatgctca 34107275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 2057577 - 2057482
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||||| |||||||||||||||  ||| |||| ||||| ||| ||||| | |||||||||||| || |||||||||||||||||| |||||    
T  2057577 aattcaccttttttaaggtgaataagtggggtgtccgggattcgaactc-gaccctg-catataacaatgtatatccctgccaactgagctatgctca 2057482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 18065352 - 18065255
Alignment:
Q  509 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||| |||||||||||||||||||  | |||||||| ||||| |  | ||||| ||||||||||||||||| | || |||||||||||| |||||    
T  18065352 aattcacatttttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgagctatgctca 18065255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 605
Target Start/End: Complemental strand, 20684329 - 20684272
Alignment:
Q  548 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| |||||||||| |||||||| |||| ||||||||| |||||||||||||||||    
T  20684329 ttcgaactccgacccctgcatataataatgtatgtccctgtcaactgagctaagctca 20684272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 596
Target Start/End: Complemental strand, 40471259 - 40471163
Alignment:
Q  501 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    ||||||||||||| ||||||| |||  ||||||||||  |||||||| |||||   || ||||| |||||||| |||||||||||||| ||||||||    
T  40471259 gtggctataattctcctttttgaagaagaataagtggggtgttcgggattcgaatcccaacccctgcatataataatgcatgtccctgtcaactgag 40471163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 592
Target Start/End: Complemental strand, 10602114 - 10602019
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcg-ggtttcgatctccgaccccggcatataacaatgcatgtccctgccaac 592  Q
    ||||||||| |||||| ||||||||| ||||||||||||  ||| || || ||||| | ||| |||| ||||||||||||||||||| ||||||||    
T  10602114 tagtggctagaattcatctttttcaaagtgaataagtggggtgtccgtgggttcgaaccccgtcccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 18089837 - 18089730
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||| ||| ||||||| |||||||||||||||||||| | |||  ||| ||||| ||| | |||| |||||  | |||||||||| |||||||||||||    
T  18089837 tagtgactagaattcacgtttttcaaggtgaataagtgaggtgtctggggttcgaactctggcccctgcatagtataatgcatgtctctgccaactgagc 18089738  T
Q  598 taagctca 605  Q
    || |||||    
T  18089737 tatgctca 18089730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 594
Target Start/End: Original strand, 20942085 - 20942192
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||||| | |||  ||| ||||| ||||  ||||  |||||||  ||||||||||||    
T  20942085 gtcaagtagtctagtgactagaattcacttttttcaaggtgaataagtgaggtgtctggggttcgaactccatcccctacatataattatgcatgtccct 20942184  T
Q  587 gccaactg 594  Q
    ||||||||    
T  20942185 gccaactg 20942192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 26975286 - 26975392
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagct 598  Q
    |||||| || |||| |||||||| || |||||||| ||| ||| |||| ||||| | ||  || | ||||||| ||||||||||||||||||||||| |     
T  26975286 tagtggttagaattaaccttttttaaagtgaataactgggtgtccggggttcgaaccccagcctctgcatatagcaatgcatgtccctgccaactgaacc 26975385  T
Q  599 aagctca 605  Q
    |||||||    
T  26975386 aagctca 26975392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 614
Target Start/End: Complemental strand, 29664709 - 29664594
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||||||| |||||||||| |  ||| |||||||||||  ||| |||| || || | |||||||| ||||||||||||||| |||||||||||| ||||    
T  29664709 tagtggctagaattcaccttat--aagatgaataagtggggtgtccgggatttgaaccccgacccctgcatataacaatgcattgtccctgccaattgag 29664612  T
Q  597 ctaagctcatgggaactt 614  Q
    ||| ||||| ||| ||||    
T  29664611 ctatgctcacggggactt 29664594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 556 - 606
Target Start/End: Original strand, 36386158 - 36386208
Alignment:
Q  556 ccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcat 606  Q
    |||||||| |||||||||||||||| ||||| |||||||||||| ||||||    
T  36386158 ccgacccctgcatataacaatgcatatccctaccaactgagctatgctcat 36386208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 575 - 612
Target Start/End: Complemental strand, 17896856 - 17896819
Alignment:
Q  575 atgcatgtccctgccaactgagctaagctcatgggaac 612  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17896856 atgcatgtccctgccaactgagctatgctcatgggaac 17896819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 605
Target Start/End: Complemental strand, 22355189 - 22355084
Alignment:
Q  501 gtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||| |||||||||||| ||||||||||||||||  |||  ||  |||||    | ||||| ||| |||||||||||||||| ||||||||||||||    
T  22355189 gtggctagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtccttgccaactgagcta 22355090  T
Q  600 agctca 605  Q
     |||||    
T  22355089 tgctca 22355084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 41195931 - 41196037
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||||||| |||||||||| ||  |||||||||| || | |||||||| ||||| ||||| || | ||||||||||||||| | |||||| ||||||||    
T  41195931 tagtggctagaattcaccttatt--aggtgaataaatgaggtgttcgggattcgaactccggcctctgcatataacaatgcattatccctgtcaactgag 41196028  T
Q  597 ctaagctca 605  Q
    ||| |||||    
T  41196029 ctatgctca 41196037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 407576 - 407480
Alignment:
Q  509 aattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||| ||||||||| ||||||| |||    ||||| ||||| |||||||||  |||||||||||||||| ||| ||||||| |||  |||||||    
T  407576 aattcacttttttcaagctgaataaatggggtgtcggggttcgaactccgacccttgcatataacaatgcatatccttgccaaccgagtcaagctca 407480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 611
Target Start/End: Complemental strand, 2935875 - 2935811
Alignment:
Q  548 ttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagctaagctcatgggaa 611  Q
    ||||| ||||| |||| ||||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  2935875 ttcgaactccggcccccgcatataacaatgcattgttcctgccaactgagctatgctcacgggaa 2935811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 605
Target Start/End: Original strand, 31088991 - 31089091
Alignment:
Q  506 tataattcacctttttcaaggtgaataagtgg-atgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctc 604  Q
    |||||||||| |||||||| | |||||||||| ||||||||| ||| | ||||||||||  |||| || |||||||||| ||  |||||||| || ||||    
T  31088991 tataattcacttttttcaaagcgaataagtgggatgttcgggattcaaactccgacccctacataaaataatgcatgtctctatcaactgaggtatgctc 31089090  T
Q  605 a 605  Q
    |    
T  31089091 a 31089091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 591
Target Start/End: Original strand, 20972826 - 20972901
Alignment:
Q  517 tttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaa 591  Q
    ||||||||||| ||| |||||| |||||||| ||||| ||||| | || |||||||| ||||||||||| ||||||    
T  20972826 tttttcaaggtcaatcagtggagtgttcggggttcgaactccggctcctgcatataataatgcatgtccatgccaa 20972901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 605
Target Start/End: Original strand, 36277757 - 36277796
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  36277757 catataacaatgcatgtcactgccaactgagctatgctca 36277796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 556 - 599
Target Start/End: Original strand, 44132608 - 44132651
Alignment:
Q  556 ccgaccccggcatataacaatgcatgtccctgccaactgagcta 599  Q
    |||||| | ||||||||||||||||||| |||||||||||||||    
T  44132608 ccgacctctgcatataacaatgcatgtctctgccaactgagcta 44132651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 591
Target Start/End: Complemental strand, 10767108 - 10767002
Alignment:
Q  488 ggtcaagtagtta-gtggctataattcacctt-tttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtcc 584  Q
    |||||| |||||| ||||||| |||||||||| ||| ||| |||||||||| | |||||||  ||||| | ||||||||  ||||||||||||  |||||    
T  10767108 ggtcaattagttaagtggctagaattcaccttcttttaagctgaataagtgaggtgttcggagttcgaaccccgacccctacatataacaatgattgtcc 10767009  T
Q  585 ctgccaa 591  Q
    |||||||    
T  10767008 ctgccaa 10767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 600
Target Start/End: Original strand, 29713076 - 29713178
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| |||||| |||||| ||||| ||||||| || |||  ||| ||||| | || | ||| ||||||||||||| |||||| |||||||||| |    
T  29713076 tagtggctagaattcatcttttttaaggtaaataagtagggtgtctggggttcgaaccccaatccctgcatataacaatgtatgtccgtgccaactgaac 29713175  T
Q  598 taa 600  Q
    |||    
T  29713176 taa 29713178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 537
Target Start/End: Complemental strand, 32677437 - 32677399
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  32677437 tagtgactataattcacctttttcaaagtgaataagtgg 32677399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 595
Target Start/End: Complemental strand, 34376583 - 34376553
Alignment:
Q  565 gcatataacaatgcatgtccctgccaactga 595  Q
    |||||||||||||||||||||||||||||||    
T  34376583 gcatataacaatgcatgtccctgccaactga 34376553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 560 - 614
Target Start/End: Original strand, 35352459 - 35352513
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctcatgggaactt 614  Q
    |||| ||||||||  ||||||||||||||||||||||||| | ||| ||||||||    
T  35352459 cccccgcatataattatgcatgtccctgccaactgagctatgttcacgggaactt 35352513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 583
Target Start/End: Original strand, 36345158 - 36345252
Alignment:
Q  490 tcaagtagtt-agtggctataattcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtc 583  Q
    |||||||||| |||||||| || |||||||||||||| ||||||||||||   || |  ||||| || ||  ||| |||||||||||||||||||    
T  36345158 tcaagtagtttagtggctagaactcacctttttcaagatgaataagtggagtgtctgagttcgaactacggtccctgcatataacaatgcatgtc 36345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 610
Target Start/End: Original strand, 37065431 - 37065533
Alignment:
Q  509 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatg 607  Q
    ||||||| ||||| ||||||||| |||| | || ||||  ||||| | |||||| | |||||||||||||||||||| | ||||| |||||| ||||| |    
T  37065431 aattcacattttttaaggtgaattagtgaggtgatcggagttcgaaccccgaccactgcatataacaatgcatgtccataccaacagagctatgctcacg 37065530  T
Q  608 gga 610  Q
    |||    
T  37065531 gga 37065533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 537
Target Start/End: Original strand, 41305053 - 41305091
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  41305053 tagtggctcgaattcacctttttcaaggtgaataagtgg 41305091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 5772906 - 5772861
Alignment:
Q  560 ccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||| |||||||||||| ||||||| |||||||||||||| |||||    
T  5772906 cccctgcatataacaatacatgtccttgccaactgagctatgctca 5772861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 566 - 599
Target Start/End: Complemental strand, 6496479 - 6496446
Alignment:
Q  566 catataacaatgcatgtccctgccaactgagcta 599  Q
    ||||||||||||||||||||| ||||||||||||    
T  6496479 catataacaatgcatgtcccttccaactgagcta 6496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 6650041 - 6649959
Alignment:
Q  511 ttcacctttttcaaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactga 595  Q
    ||||||||||| || |||||||||||| |||| ||  ||||| ||| || ||| ||||||||||| | |||||||| ||||||||    
T  6650041 ttcaccttttttaaagtgaataagtggctgtttgg--ttcgaactctgatccctgcatataacaacgtatgtccctaccaactga 6649959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 605
Target Start/End: Complemental strand, 24586717 - 24586648
Alignment:
Q  536 ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||||||||| ||||| ||||| || | ||||| || |||||||||||||  |||||||||||| ||||    
T  24586717 ggatgttcggggttcgaactccggccgctgcatacaataatgcatgtccctttcaactgagctaaactca 24586648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 605
Target Start/End: Complemental strand, 30877008 - 30876951
Alignment:
Q  548 ttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    ||||| |||||||||| |||||||||||| |||| |||| |||||| ||||| |||||    
T  30877008 ttcgaactccgacccctgcatataacaatacatgaccctaccaactaagctatgctca 30876951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 35352380 - 35352429
Alignment:
Q  489 gtcaagtagt-tagtggctataattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  35352380 gtcaagtagtctagtgactagaattcacatttttcaaggtgaataagtgg 35352429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 537
Target Start/End: Original strand, 2394970 - 2394998
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||||||||||||||||||||||    
T  2394970 aattcacctttttcaaggtgaataagtgg 2394998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 596
Target Start/End: Original strand, 3037611 - 3037708
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgag 596  Q
    ||||| ||| |||||||||| |  |||||||||||||||  ||| |||| ||||| | ||| |||| ||||||||||||||| |||||| ||||||||||    
T  3037611 tagtgcctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcccagccaactgag 3037708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 537
Target Start/End: Original strand, 5807764 - 5807792
Alignment:
Q  509 aattcacctttttcaaggtgaataagtgg 537  Q
    |||||||||||||||||||||||||||||    
T  5807764 aattcacctttttcaaggtgaataagtgg 5807792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 34020 - 34127
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| ||||| ||||||| || | ||||||||||| ||| |||  ||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  34020 tagtggctagaattctccttttttaaagagaataagtggagtgtccggaattcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagc 34119  T
Q  598 taagctca 605  Q
    || |||||    
T  34120 tatgctca 34127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 1158 - 1040
Alignment:
Q  489 gtcaagtagtt-agtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || |||  ||| ||||| | ||  ||||  |||||||  ||||||||||||    
T  1158 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccct 1059  T
Q  587 gccaactgagctaagctca 605  Q
     |||||||||||| |||||    
T  1058 accaactgagctatgctca 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2098 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 599
Target Start/End: Original strand, 625 - 702
Alignment:
Q  523 aaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaatgca-tgtccctgccaactgagcta 599  Q
    ||||||||||||||| |||| ||| ||||| |||| |||||  |||||||||||||| ||||||||||||||||||||    
T  625 aaggtgaataagtgggtgtttgggattcgaactccaacccctacatataacaatgcattgtccctgccaactgagcta 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 440507 - 440406
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagt-ggatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    |||||| || ||||||||||||| ||||||||||||| || ||||||||  |||| | ||| ||||  ||||||| ||||||||| ||||||||||||||    
T  440507 tagtggttagaattcaccttttttaaggtgaataagtggggtgttcgggagtcgaaccccggcccctacatataataatgcatgttcctgccaactgagc 440408  T
Q  598 ta 599  Q
    ||    
T  440407 ta 440406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 4568 - 4521
Alignment:
Q  558 gaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4568 gacccctgcatataacaatgcatgtccctgccaactgagctatgctca 4521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 4588 - 4541
Alignment:
Q  558 gaccccggcatataacaatgcatgtccctgccaactgagctaagctca 605  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4588 gacccctgcatataacaatgcatgtccctgccaactgagctatgctca 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 612
Target Start/End: Original strand, 37315 - 37429
Alignment:
Q  499 tagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagc 597  Q
    ||||||||| | ||||| ||||| |||||||||||||||  ||| | |||||||| |  || |||| | ||| |||||||||||||||| ||||||||||    
T  37315 tagtggctaaatttcacattttttaaggtgaataagtggggtgtccaggtttcgaacatcggcccctgtataaaacaatgcatgtccctaccaactgagc 37414  T
Q  598 taagctcatgggaac 612  Q
    || ||||| ||||||    
T  37415 tatgctcacgggaac 37429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 606
Target Start/End: Complemental strand, 67270 - 67161
Alignment:
Q  498 ttagtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgag 596  Q
    |||||||||| ||||||| ||||||||||||| |||||||  ||| | || ||||| | ||  ||||  ||||||||||||||| ||||| |||||||||    
T  67270 ttagtggctagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagcccctacatataacaatgcatatccctcccaactgag 67171  T
Q  597 ctaagctcat 606  Q
    ||| ||||||    
T  67170 ctatgctcat 67161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 245484 - 245554
Alignment:
Q  539 tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaactgagctaagctcatggg 609  Q
    |||||||||||||| | |||||||| |||||||||| |||| || ||||||||||||| || | |||||||    
T  245484 tgttcgggtttcgaaccccgacccctgcatataacagtgcacgttcctgccaactgagttatgttcatggg 245554  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 586
Target Start/End: Complemental strand, 7163 - 7076
Alignment:
Q  500 agtggctataattcacctttttcaaggtgaataagtgga-tgttcgggtttcgatctccgaccccggcatataacaatgcatgtccct 586  Q
    |||||||| ||||||||||||||||| |||||||||||| |||  | | |||||   | |||||| |||||||||||||||| |||||    
T  7163 agtggctagaattcacctttttcaagatgaataagtggagtgtatgaggttcgaaacctgacccctgcatataacaatgcatatccct 7076  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 22507 - 22454
Alignment:
Q  523 aaggtgaataagtggatgttcgggtttcgatctccgaccccggcatataacaat 576  Q
    ||||||||||||||| |||||||| ||||| ||| ||||||  |||||||||||    
T  22507 aaggtgaataagtgggtgttcggggttcgaactctgacccctacatataacaat 22454  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 593
Target Start/End: Original strand, 19392 - 19477
Alignment:
Q  509 aattcacctttttcaaggtgaataagtg-gatgttcgggtttcgatctccgaccccggcatataacaatgcatgtccctgccaact 593  Q
    |||||||||||||||| |||||||| || | ||| || | ||| ||| || |||||  ||||||||||||||||||| ||||||||    
T  19392 aattcacctttttcaaagtgaataaatgaggtgtccgaggttcaatccccaacccctacatataacaatgcatgtccgtgccaact 19477  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 12613 - 12565
Alignment:
Q  558 gaccccggcatataacaatgcat-gtccctgccaactgagctaagctca 605  Q
    |||||| |||||||| ||||||| ||||||||||||||||||| |||||    
T  12613 gacccctgcatataataatgcattgtccctgccaactgagctatgctca 12565  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 473
Target Start/End: Complemental strand, 14434 - 14394
Alignment:
Q  433 ttttttaaaaaaggaaccaaatcaaactaactagtttggat 473  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  14434 ttttttaaaaaaggaaccaaatcaaacaaattggtttggat 14394  T

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