View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1715_low_97 (Length: 338)

Name: NF1715_low_97
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1715_low_97
NF1715_low_97
[»] chr3 (49 HSPs)
chr3 (11-320)||(39671084-39671408)
chr3 (11-92)||(39020146-39020229)
chr3 (11-91)||(10206960-10207048)
chr3 (11-67)||(24482950-24483006)
chr3 (11-67)||(44677471-44677527)
chr3 (11-67)||(49363238-49363294)
chr3 (11-67)||(50206957-50207013)
chr3 (11-66)||(46253651-46253706)
chr3 (11-90)||(37508485-37508572)
chr3 (11-87)||(36121826-36121905)
chr3 (11-67)||(32767704-32767760)
chr3 (11-67)||(33375888-33375944)
chr3 (11-63)||(39697209-39697261)
chr3 (11-63)||(43905005-43905057)
chr3 (11-90)||(3281703-3281778)
chr3 (11-65)||(11633643-11633697)
chr3 (11-67)||(8821658-8821714)
chr3 (11-92)||(26996311-26996400)
chr3 (11-67)||(30909057-30909113)
chr3 (11-67)||(55400027-55400083)
chr3 (11-66)||(46019491-46019546)
chr3 (11-53)||(8846533-8846575)
chr3 (11-68)||(42358625-42358683)
chr3 (11-90)||(49761316-49761391)
chr3 (11-60)||(390844-390893)
chr3 (18-63)||(3953469-3953514)
chr3 (11-67)||(20080101-20080156)
chr3 (17-60)||(46982896-46982939)
chr3 (11-53)||(16675513-16675555)
chr3 (22-68)||(18741144-18741190)
chr3 (17-63)||(24095399-24095445)
chr3 (11-53)||(24645398-24645440)
chr3 (11-53)||(52937225-52937267)
chr3 (12-53)||(1337827-1337868)
chr3 (27-68)||(6178429-6178470)
chr3 (11-60)||(22371226-22371275)
chr3 (17-53)||(27541495-27541532)
chr3 (12-53)||(34057941-34057982)
chr3 (17-53)||(45711432-45711469)
chr3 (21-92)||(48893349-48893416)
chr3 (11-89)||(49417573-49417659)
chr3 (11-48)||(51465901-51465938)
chr3 (28-68)||(25188469-25188509)
chr3 (11-67)||(37927192-37927248)
chr3 (27-67)||(41309028-41309067)
chr3 (17-53)||(46852125-46852161)
chr3 (27-67)||(48405438-48405478)
chr3 (11-67)||(54694100-54694156)
chr3 (20-60)||(55013038-55013078)
[»] scaffold0204 (1 HSPs)
scaffold0204 (12-87)||(23086-23159)
[»] chr6 (22 HSPs)
chr6 (11-67)||(13143369-13143425)
chr6 (17-65)||(2777309-2777357)
chr6 (11-67)||(11547516-11547572)
chr6 (21-87)||(14986742-14986812)
chr6 (11-67)||(754425-754481)
chr6 (11-67)||(35213548-35213604)
chr6 (11-91)||(2075438-2075526)
chr6 (11-60)||(3610948-3610997)
chr6 (11-60)||(4820286-4820335)
chr6 (11-60)||(34504055-34504104)
chr6 (11-67)||(18141288-18141344)
chr6 (11-67)||(20822855-20822911)
chr6 (11-67)||(30152517-30152573)
chr6 (11-67)||(2689052-2689107)
chr6 (11-67)||(30036781-30036837)
chr6 (11-90)||(17551365-17551453)
chr6 (27-90)||(2242025-2242096)
chr6 (11-53)||(5028253-5028295)
chr6 (27-65)||(5570337-5570375)
chr6 (11-53)||(6531170-6531212)
chr6 (11-68)||(26832673-26832730)
chr6 (11-47)||(32046746-32046782)
[»] chr4 (48 HSPs)
chr4 (11-67)||(39344967-39345023)
chr4 (12-87)||(48335564-48335637)
chr4 (11-89)||(22819647-22819733)
chr4 (11-67)||(624299-624355)
chr4 (11-63)||(26206964-26207016)
chr4 (17-67)||(439253-439303)
chr4 (11-69)||(6141765-6141823)
chr4 (11-88)||(25318052-25318128)
chr4 (11-60)||(41486130-41486179)
chr4 (11-67)||(9118851-9118907)
chr4 (11-67)||(30079874-30079930)
chr4 (11-67)||(47099050-47099106)
chr4 (11-88)||(26718379-26718452)
chr4 (11-88)||(26731007-26731080)
chr4 (17-91)||(35820174-35820249)
chr4 (11-94)||(13086015-13086106)
chr4 (11-65)||(47965769-47965823)
chr4 (11-67)||(14451421-14451477)
chr4 (11-67)||(21617211-21617267)
chr4 (11-88)||(31657657-31657730)
chr4 (28-68)||(41262349-41262389)
chr4 (11-67)||(46405961-46406017)
chr4 (11-66)||(38338909-38338964)
chr4 (21-67)||(5932154-5932200)
chr4 (11-87)||(17683236-17683308)
chr4 (11-90)||(43769720-43769795)
chr4 (11-53)||(52846214-52846256)
chr4 (11-68)||(28458364-28458421)
chr4 (11-89)||(28657428-28657502)
chr4 (27-90)||(31275151-31275213)
chr4 (11-67)||(14527672-14527728)
chr4 (11-67)||(21260326-21260382)
chr4 (11-67)||(30170007-30170063)
chr4 (21-65)||(36111393-36111437)
chr4 (33-69)||(47240843-47240879)
chr4 (11-67)||(51194297-51194353)
chr4 (11-67)||(51887691-51887747)
chr4 (17-63)||(40348825-40348872)
chr4 (11-53)||(18882962-18883004)
chr4 (11-90)||(23822232-23822319)
chr4 (17-89)||(37297047-37297127)
chr4 (27-90)||(54000695-54000766)
chr4 (11-89)||(14010105-14010191)
chr4 (11-60)||(53152308-53152357)
chr4 (17-68)||(3316377-3316429)
chr4 (11-67)||(33860675-33860730)
chr4 (11-67)||(33899313-33899369)
chr4 (17-52)||(36177948-36177984)
[»] chr2 (42 HSPs)
chr2 (11-67)||(13347802-13347858)
chr2 (11-67)||(35589374-35589430)
chr2 (12-90)||(29684600-29684686)
chr2 (11-92)||(10711731-10711808)
chr2 (11-67)||(39449295-39449351)
chr2 (11-87)||(41569383-41569462)
chr2 (11-63)||(433882-433934)
chr2 (11-67)||(6999055-6999111)
chr2 (11-67)||(16677700-16677756)
chr2 (11-67)||(18176968-18177024)
chr2 (11-67)||(18723622-18723678)
chr2 (11-67)||(36802924-36802980)
chr2 (11-67)||(39213757-39213813)
chr2 (31-86)||(13265975-13266029)
chr2 (21-87)||(17779391-17779460)
chr2 (11-66)||(25881573-25881628)
chr2 (11-90)||(9634423-9634510)
chr2 (17-67)||(29051646-29051696)
chr2 (11-67)||(37257477-37257534)
chr2 (11-67)||(6170658-6170714)
chr2 (11-67)||(12889819-12889875)
chr2 (11-67)||(14233706-14233762)
chr2 (11-67)||(15269889-15269945)
chr2 (17-68)||(22888814-22888866)
chr2 (11-67)||(26206875-26206931)
chr2 (17-68)||(41195610-41195662)
chr2 (11-67)||(44711976-44712032)
chr2 (11-66)||(28245757-28245812)
chr2 (11-53)||(23352892-23352934)
chr2 (11-53)||(34119639-34119681)
chr2 (11-53)||(42678791-42678833)
chr2 (11-48)||(9377503-9377540)
chr2 (11-44)||(29712029-29712062)
chr2 (21-87)||(37737975-37738036)
chr2 (11-48)||(40937051-40937088)
chr2 (11-63)||(1416026-1416078)
chr2 (11-67)||(2221021-2221077)
chr2 (11-67)||(2841862-2841918)
chr2 (11-63)||(4952467-4952519)
chr2 (11-67)||(11385002-11385057)
chr2 (11-67)||(26738867-26738923)
chr2 (11-51)||(35705538-35705578)
[»] chr8 (39 HSPs)
chr8 (17-67)||(34018836-34018886)
chr8 (11-67)||(33589217-33589273)
chr8 (11-66)||(7955994-7956049)
chr8 (11-91)||(41520964-41521052)
chr8 (11-90)||(36110135-36110222)
chr8 (11-67)||(1633877-1633933)
chr8 (11-67)||(11017833-11017889)
chr8 (11-67)||(11657987-11658043)
chr8 (11-67)||(16872143-16872199)
chr8 (11-67)||(30136002-30136058)
chr8 (11-67)||(37783958-37784014)
chr8 (11-67)||(45529233-45529289)
chr8 (11-66)||(16327139-16327194)
chr8 (12-96)||(35564280-35564372)
chr8 (11-90)||(6991795-6991882)
chr8 (11-92)||(5277691-5277780)
chr8 (12-89)||(5864201-5864286)
chr8 (11-67)||(9549186-9549242)
chr8 (11-67)||(16613662-16613718)
chr8 (11-67)||(16966813-16966869)
chr8 (11-67)||(31596976-31597032)
chr8 (11-67)||(40739899-40739955)
chr8 (11-88)||(42569716-42569789)
chr8 (11-48)||(7473013-7473050)
chr8 (11-89)||(30439493-30439567)
chr8 (11-67)||(7592877-7592933)
chr8 (11-67)||(12707177-12707233)
chr8 (11-67)||(34718143-34718199)
chr8 (12-67)||(34490146-34490200)
chr8 (11-66)||(41159876-41159931)
chr8 (11-53)||(18651412-18651454)
chr8 (21-67)||(32847684-32847730)
chr8 (17-90)||(2730953-2731035)
chr8 (11-89)||(4658250-4658336)
chr8 (11-68)||(4994408-4994465)
chr8 (27-68)||(24798361-24798402)
chr8 (21-54)||(32501194-32501227)
chr8 (21-53)||(6968230-6968262)
chr8 (28-60)||(33605082-33605114)
[»] chr7 (35 HSPs)
chr7 (11-90)||(21822586-21822673)
chr7 (11-67)||(32815196-32815252)
chr7 (11-67)||(37808751-37808807)
chr7 (11-90)||(16980294-16980381)
chr7 (11-90)||(39231715-39231802)
chr7 (11-89)||(13162917-13163003)
chr7 (11-67)||(3343317-3343373)
chr7 (11-89)||(11352961-11353035)
chr7 (11-67)||(19786066-19786122)
chr7 (11-67)||(43573530-43573586)
chr7 (11-65)||(29162963-29163017)
chr7 (11-89)||(13729724-13729810)
chr7 (11-60)||(38779731-38779780)
chr7 (11-67)||(28036772-28036828)
chr7 (11-67)||(29002636-29002692)
chr7 (11-67)||(39332013-39332069)
chr7 (11-63)||(40353296-40353348)
chr7 (11-92)||(44184546-44184635)
chr7 (32-89)||(46773650-46773715)
chr7 (11-91)||(41893911-41893999)
chr7 (11-53)||(33180697-33180739)
chr7 (17-67)||(41458624-41458674)
chr7 (11-89)||(21559796-21559882)
chr7 (11-67)||(10055619-10055675)
chr7 (11-67)||(11564921-11564977)
chr7 (22-90)||(26749014-26749077)
chr7 (11-53)||(3062372-3062414)
chr7 (27-65)||(7295480-7295518)
chr7 (18-89)||(41025759-41025838)
chr7 (21-67)||(41402535-41402581)
chr7 (11-53)||(47078238-47078280)
chr7 (11-63)||(18111598-18111651)
chr7 (11-87)||(31844592-31844675)
chr7 (27-68)||(34978323-34978364)
chr7 (11-63)||(35452560-35452612)
[»] chr5 (39 HSPs)
chr5 (11-90)||(8675420-8675507)
chr5 (11-67)||(8267807-8267863)
chr5 (11-67)||(21064213-21064269)
chr5 (11-65)||(43441768-43441822)
chr5 (11-89)||(5042246-5042332)
chr5 (11-89)||(9977117-9977203)
chr5 (17-91)||(32912034-32912116)
chr5 (11-67)||(5821599-5821655)
chr5 (11-67)||(35098992-35099048)
chr5 (11-86)||(2688973-2689047)
chr5 (11-60)||(15478693-15478742)
chr5 (11-60)||(18842308-18842357)
chr5 (11-67)||(6517740-6517796)
chr5 (11-67)||(25871433-25871489)
chr5 (11-91)||(19481169-19481257)
chr5 (17-89)||(19839979-19840059)
chr5 (21-89)||(23126340-23126416)
chr5 (11-53)||(189690-189732)
chr5 (17-51)||(34124665-34124699)
chr5 (11-90)||(34270336-34270411)
chr5 (17-63)||(38704190-38704236)
chr5 (11-53)||(43214046-43214088)
chr5 (17-66)||(6446511-6446560)
chr5 (21-66)||(16437562-16437607)
chr5 (11-68)||(20770158-20770215)
chr5 (17-65)||(22649654-22649703)
chr5 (12-89)||(3640185-3640258)
chr5 (11-67)||(4430923-4430979)
chr5 (11-67)||(10649463-10649519)
chr5 (11-67)||(15267812-15267868)
chr5 (11-67)||(33620636-33620692)
chr5 (11-66)||(39088855-39088910)
chr5 (11-67)||(43196612-43196668)
chr5 (17-89)||(18660757-18660837)
chr5 (11-53)||(41175693-41175735)
chr5 (12-53)||(1839333-1839374)
chr5 (11-60)||(6931046-6931095)
chr5 (11-59)||(6292157-6292205)
chr5 (28-68)||(42446295-42446335)
[»] chr1 (59 HSPs)
chr1 (11-94)||(38303675-38303755)
chr1 (11-67)||(36577399-36577455)
chr1 (11-65)||(20565105-20565159)
chr1 (11-65)||(26837482-26837536)
chr1 (11-65)||(29586023-29586077)
chr1 (17-67)||(44294043-44294093)
chr1 (11-97)||(32915059-32915153)
chr1 (11-89)||(46082108-46082194)
chr1 (11-92)||(902633-902722)
chr1 (11-67)||(3603139-3603195)
chr1 (11-67)||(8411705-8411761)
chr1 (11-67)||(9008253-9008309)
chr1 (11-67)||(21340550-21340606)
chr1 (11-67)||(35136872-35136928)
chr1 (17-89)||(1790506-1790586)
chr1 (17-93)||(15705055-15705139)
chr1 (11-53)||(40316931-40316973)
chr1 (11-89)||(10890033-10890119)
chr1 (11-67)||(756884-756940)
chr1 (11-67)||(13489690-13489746)
chr1 (11-67)||(33024558-33024614)
chr1 (11-67)||(33054075-33054131)
chr1 (11-67)||(50328128-50328184)
chr1 (11-89)||(50781557-50781631)
chr1 (11-87)||(18336158-18336230)
chr1 (21-67)||(1852948-1852994)
chr1 (11-53)||(19969549-19969591)
chr1 (11-88)||(46172394-46172478)
chr1 (27-87)||(47398455-47398511)
chr1 (11-90)||(52362479-52362566)
chr1 (11-60)||(34040487-34040536)
chr1 (11-68)||(36779256-36779313)
chr1 (11-68)||(50824768-50824825)
chr1 (11-59)||(3024737-3024785)
chr1 (17-90)||(8200084-8200153)
chr1 (11-67)||(47214236-47214292)
chr1 (11-88)||(48220131-48220204)
chr1 (11-67)||(51191816-51191872)
chr1 (12-88)||(49241493-49241565)
chr1 (17-63)||(25259115-25259161)
chr1 (17-67)||(26585872-26585922)
chr1 (11-53)||(32319296-32319338)
chr1 (11-53)||(34254338-34254380)
chr1 (11-53)||(44632570-44632612)
chr1 (21-67)||(48325995-48326041)
chr1 (11-68)||(50775143-50775201)
chr1 (11-53)||(52714888-52714930)
chr1 (12-65)||(4514442-4514495)
chr1 (12-53)||(16986980-16987021)
chr1 (11-48)||(21486304-21486341)
chr1 (22-67)||(47215727-47215772)
chr1 (17-53)||(48470680-48470717)
chr1 (11-89)||(51286354-51286440)
chr1 (22-67)||(52267231-52267276)
chr1 (11-67)||(7128146-7128202)
chr1 (17-53)||(29154822-29154858)
chr1 (17-60)||(29359673-29359717)
chr1 (11-67)||(38713598-38713654)
chr1 (11-51)||(46543429-46543469)
[»] scaffold0471 (1 HSPs)
scaffold0471 (11-90)||(4-91)
[»] scaffold0321 (1 HSPs)
scaffold0321 (11-67)||(19664-19720)
[»] scaffold0221 (1 HSPs)
scaffold0221 (17-90)||(8211-8292)
[»] scaffold0449 (1 HSPs)
scaffold0449 (11-67)||(9231-9287)
[»] scaffold0532 (1 HSPs)
scaffold0532 (11-66)||(10993-11048)
[»] scaffold0687 (1 HSPs)
scaffold0687 (11-65)||(2227-2281)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-70)||(122856-122909)
[»] scaffold0136 (1 HSPs)
scaffold0136 (11-67)||(38453-38509)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 320
Target Start/End: Original strand, 39671084 - 39671408
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatga-gagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctttatctaatagac 101  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||||||        ||||||||||||||||||||||||||||||||||    
T  39671084 gagataaagtaaaaagtaatgtgagtatgaagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctttatctaatagac 39671183  T
Q  102 tttatattttggctattaaaatgtgttaggtgcatgta---------aggggtttggagtatatgtcgtttgttggtcttggaggagaatacttttcatg 192  Q
    ||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39671184 tttatattttggctattaaaatgtgttaggtgcatgtatatttagtaaggggtttggagtatatgtcgtttgttggtcttggaggagaatacttttcatg 39671283  T
Q  193 tgtgaatttgagttaggtttaaaatgannnnnnnnnnnngtttataattgttttgagcaagcgattgtatttgatcgatagacatgacgaaatgttctta 292  Q
    ||||||||||||||||||||| |||||            |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39671284 tgtgaatttgagttaggtttagaatgaatttttttt---gtttataattgttttgtgcaagcgattgtatttgatcgatagacatgacgaaatgttctta 39671380  T
Q  293 gtgaataatacattgtcaaaggacttat 320  Q
    ||||||||||||||||||||||||||||    
T  39671381 gtgaataatacattgtcaaaggacttat 39671408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 39020146 - 39020229
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--aatgttcaaatatcatttctctttat 92  Q
    ||||| |||||||||||||||||||||||||||| ||| || ||| |||| |||||  ||||||||||||||||||||||||||    
T  39020146 gagataaagtaaaaagtaatgtgagtatgagagaaaaagttattgtaaaagttgtctgaatgttcaaatatcatttctctttat 39020229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 10206960 - 10207048
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttta 91  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||        ||||||||||||||||||||||||    
T  10206960 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcttta 10207048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 24482950 - 24483006
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  24482950 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 24483006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 44677471 - 44677527
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  44677471 gagataaagtaaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgtca 44677527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 49363238 - 49363294
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  49363238 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 49363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 50206957 - 50207013
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  50206957 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 50207013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 46253706 - 46253651
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  46253706 gagataaagtaaaaagtaatgtgagtatgagagaaaaaattgttgcaaaagttgtc 46253651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 37508485 - 37508572
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||        |||||||||||||||||||||||    
T  37508485 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctcttt 37508572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 36121905 - 36121826
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca---atgttcaaatatcatttctc 87  Q
    ||||| ||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||   ||||||||||||||||||||    
T  36121905 gagataaagtaaaaagtaacgtgagtataagaaagaaagttgttgcaaaagttgtcatttatgttcaaatatcatttctc 36121826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 32767760 - 32767704
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  32767760 gagataaagtaaaaaataatgtgagtatgagagagaaaattattgcaaaagttgtca 32767704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 33375944 - 33375888
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  33375944 gagataaagtaaaaaataatgtgagtatgagagagaaaattgttgtaaaagttgtca 33375888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 39697209 - 39697261
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  39697209 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttacaaaaatt 39697261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 43905057 - 43905005
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  43905057 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttacaaaaatt 43905005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 3281703 - 3281778
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||  |||||    | ||||||||||||||||||||||||    
T  3281703 gagataaagtaaaaagtaatgtgagtataagagagaaagttgtcacaaaa----taaatgttcaaatatcatttctcttt 3281778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 11633697 - 11633643
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  11633697 gagataaagtaaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgt 11633643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 8821714 - 8821658
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||    
T  8821714 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttacaaaagttgtca 8821658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 26996400 - 26996311
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattg--------tcaatgttcaaatatcatttctctttat 92  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||| ||||| |||        | ||||||||||||||||||||||||||    
T  26996400 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttacaaaagttgttactaaatgaatgttcaaatatcatttctctttat 26996311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 30909113 - 30909057
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| ||| ||||||||| ||||||||||| ||||||    
T  30909113 gagataaagtaaaaagtaatgtgaatataagagagaaagttgttgcaaaagttgtca 30909057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 55400083 - 55400027
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  55400083 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtca 55400027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 46019546 - 46019491
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| |||||    
T  46019546 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtc 46019491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 8846575 - 8846533
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||||||||    
T  8846575 gagataaagtaaaaaataatgtgagtatgagagagaaaattgt 8846533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 42358625 - 42358683
Alignment:
Q  11 gagatgaagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||  |||||||||||||    
T  42358625 gagataaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaaattgtcaa 42358683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 49761391 - 49761316
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||    |  |||||||||||||||||||||||    
T  49761391 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctcttt 49761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 390893 - 390844
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||||||||||||||||| ||| |||||||||||    
T  390893 gagataaagtaaaaaataatgtgagtatgagagaaaaagttgttgcaaaa 390844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3953469 - 3953514
Alignment:
Q  18 agtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||    
T  3953469 agtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaaatt 3953514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 20080156 - 20080101
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  20080156 gagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcacaaaaattgtca 20080101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 46982896 - 46982939
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||    
T  46982896 aagtagaaagtaatatgagtatgagagagaaatttgttgcaaaa 46982939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 16675513 - 16675555
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||    
T  16675513 gagataaagtaaaaagtaacgtgaatatgagagagaaaattgt 16675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 18741190 - 18741144
Alignment:
Q  22 aaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||||    
T  18741190 aaaaataatgtgagtatgaaagagaaaattgttacaaaaattatcaa 18741144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 24095399 - 24095445
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||||||| |||||||||||||||||||||| ||||  ||||||||    
T  24095399 aagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaaatt 24095445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 24645440 - 24645398
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  24645440 gagataaagtaaaaagtaatgtgagtatgagagaaaaagttgt 24645398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 52937267 - 52937225
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||    
T  52937267 gagataaagtaaaaagtaatgtgagtatgagatagaaagttgt 52937225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 1337827 - 1337868
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||| ||||||||| |||||||||||||||| ||||||||||    
T  1337827 agataaagtaaaaaataatgtgagtatgagatagaaaattgt 1337868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 6178429 - 6178470
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||||||||||||||||||||  ||||| |||||||    
T  6178429 taatgtgagtatgagagagaaaattgtcacaaaagttgtcaa 6178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 22371275 - 22371226
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||||| |||||||||||||||||| || |||||    
T  22371275 gagataaagtaaaaaataatgtaagtatgagagagaaaattattacaaaa 22371226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 27541495 - 27541532
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgt 53  Q
    |||||||||| |||||||||||||||||||||||||||    
T  27541495 aagtaaaaagataatgtgagtatgagagagaaaattgt 27541532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 34057941 - 34057982
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  34057941 agataaagtaaaaagtaacgtgagtatgagagagaaagttgt 34057982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 45711432 - 45711469
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgt 53  Q
    |||||||||| |||||||||||||||||||||||||||    
T  45711432 aagtaaaaagataatgtgagtatgagagagaaaattgt 45711469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 48893416 - 48893349
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctttat 92  Q
    ||||| |||||||||||||||||| ||||||||  |||||| ||  |||||| |||||||||||||| ||||    
T  48893416 aaaaaataatgtgagtatgagagaaaaaattgt--caaaaaatg--aatgtttaaatatcatttctccttat 48893349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 49417659 - 49417573
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| || |||||| |||||||||||||||||||||| ||||  ||||| ||||||        ||||||||||||||||||||||    
T  49417659 gagataaaataaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctctt 49417573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 51465901 - 51465938
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaa 48  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  51465901 gagataaagtaaaaagtaatatgagtatgagagagaaa 51465938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 25188469 - 25188509
Alignment:
Q  28 aatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  25188469 aatgtgagtaagagagagaaagttgttgcaaaagttgtcaa 25188509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 37927192 - 37927248
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||  ||||| ||||||    
T  37927192 gagataaagtaaaaaattatgtgagtatgagagagaaagttgtcacaaaagttgtca 37927248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 41309067 - 41309028
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  41309067 taatgtgagtatgagagagaaaattgtt-aaaaaattgtca 41309028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 46852125 - 46852161
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  46852125 aagtaaaaagtaatatgagtatgagagagaaagttgt 46852161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 48405478 - 48405438
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    |||||||||||||||||||||| ||||| ||||| ||||||    
T  48405478 taatgtgagtatgagagagaaagttgttacaaaagttgtca 48405438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 54694100 - 54694156
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| ||| ||||  |||||||||||| |||| |||||||||||||    
T  54694100 gagataaagtaaaaaataacgtgataatgagagagaaagttgtagcaaaaattgtca 54694156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 55013078 - 55013038
Alignment:
Q  20 taaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||||||||||||| ||| ||||||||| |||||||||||    
T  55013078 taaaaagtaatgtgaatataagagagaaagttgttgcaaaa 55013038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 23159 - 23086
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctc 87  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  23159 agataaagtaaaaaataatgtgaatatgagagagaaaattgttgcaaaaattgt--atgttcgaatatcatttctc 23086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 13143369 - 13143425
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13143369 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtca 13143425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 2777309 - 2777357
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2777309 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttgt 2777357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 11547516 - 11547572
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  11547516 gagataaagtaaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgtca 11547572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 14986742 - 14986812
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc----aatgttcaaatatcatttctc 87  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||    |||||||||||||||||||||    
T  14986742 aaaaaatagtgtgagtatgagagagaaaattgttgcaaaagttgtcactaaatgttcaaatatcatttctc 14986812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 754425 - 754481
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  754425 gagataaagtaaaaagtaatgtgagtatgagagaaaaagttgttgcaaaagttgtca 754481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 35213548 - 35213604
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  35213548 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttacaaaagttgtca 35213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 2075438 - 2075526
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttta 91  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||||  |||||        ||||||||||||||||||||||||    
T  2075438 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagctgtcactaaatggatgttcaaatatcatttctcttta 2075526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 3610948 - 3610997
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  3610948 gagataaagtaaaaagtaatgtgagtatgagagaaaaagttgttgcaaaa 3610997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 4820335 - 4820286
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  4820335 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaa 4820286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 34504104 - 34504055
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  34504104 gagataaagtgaaaagtaatgtgagtatgagagagaaagttgttgcaaaa 34504055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 18141288 - 18141344
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  18141288 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtca 18141344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 20822855 - 20822911
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  20822855 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtca 20822911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 30152517 - 30152573
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||||||||| ||||||    
T  30152517 gagataaagtaaaaaattatgtgagtatgagagagaaagttgttgcaaaagttgtca 30152573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 2689052 - 2689107
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  2689052 gagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcacaaaaattgtca 2689107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 30036781 - 30036837
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| | |||||| ||||||||||||| ||||||||||| ||||||    
T  30036781 gagataaagtaaaaaattatgtgattatgagagagaaagttgttgcaaaagttgtca 30036837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 17551365 - 17551453
Alignment:
Q  11 gagatgaagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa--------tgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||  |||||||||||||||||||||| ||||| ||||| |||||||        ||||||||||||||||||||||    
T  17551365 gagataaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttctcttt 17551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 2242025 - 2242096
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa--------tgttcaaatatcatttctcttt 90  Q
    |||||||||||||||||||||| ||||  |||||||||||||        ||||||||||||||||||||||    
T  2242025 taatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctcttt 2242096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 5028253 - 5028295
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||    
T  5028253 gagataaagtaaaaagtaatgtgagtataagagagaaagttgt 5028295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 5570337 - 5570375
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  5570337 taatgtgagtatgagagagaaaattgtcacaaaaattgt 5570375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 6531170 - 6531212
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  6531170 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 6531212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 26832730 - 26832673
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |   ||||||||||||    
T  26832730 gagataaagtaaaaaatgatgtgagtatgagagagaaaattatataaaaaattgtcaa 26832673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 32046782 - 32046746
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaa 47  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  32046782 gagataaagtaaaaaataatgtgagtatgagagagaa 32046746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 39344967 - 39345023
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39344967 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtca 39345023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 48335637 - 48335564
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctc 87  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  48335637 agataaagtaaaaaataatgtgaatatgagagagaaaattgttgcaaaaattgt--atgttcgaatatcatttctc 48335564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 22819733 - 22819647
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||        ||||||||||||||||||||||    
T  22819733 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctctt 22819647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 624299 - 624355
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  624299 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 624355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 26206964 - 26207016
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  26206964 gagataaagtaaaaagtaatgtgaatatgagagagaaaattgttgcaaaaatt 26207016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 439253 - 439303
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  439253 aagtaaaaactaatgtgagtatgagagagaaaattgttgcgaaaattgtca 439303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 6141765 - 6141823
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaat 69  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  6141765 gagataaagtaaagagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcaat 6141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 25318052 - 25318128
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| |||||| || || || ||||||||||||||||||    
T  25318052 gagataaagtaaaaaataatatgagtatgagagagaaaattgtcgcaaaagttatc-atattcaaatatcatttctct 25318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 41486130 - 41486179
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  41486130 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaa 41486179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 9118851 - 9118907
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  9118851 gagataaagtaaaaaataatgtgattatgagagagaaaattgttgcaaaagttgtca 9118907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 30079930 - 30079874
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  30079930 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 30079874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 47099106 - 47099050
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  47099106 gagataaagtaaaaagtaatgtgagtatgtgagagaaagttgttgcaaaagttgtca 47099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 26718452 - 26718379
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || ||| ||   |||||||||||||||||||||    
T  26718452 gagataaagtaaaaagtaatgtgagtatgagagagaaaattgt--cataaaatg--gatgttcaaatatcatttctct 26718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 26731080 - 26731007
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || ||| ||   |||||||||||||||||||||    
T  26731080 gagataaagtaaaaagtaatgtgagtatgagagagaaaattgt--cataaaatg--gatgttcaaatatcatttctct 26731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 35820249 - 35820174
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattg-tcaatgttcaaatatcatttctcttta 91  Q
    |||||||||||||| ||| ||||||||||||| |||||| |||| ||| | |||||||||||||||||||| ||||    
T  35820249 aagtaaaaagtaatatgaatatgagagagaaagttgttgtaaaagttgttgaatgttcaaatatcatttctgttta 35820174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 13086106 - 13086015
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctctttatct 94  Q
    ||||| || ||||||||||||||||||||||||||||| ||||| ||||| |||||        |||| |||||||||||||||||||||||    
T  13086106 gagataaaataaaaagtaatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatgaatgatcaaatatcatttctctttatct 13086015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 47965823 - 47965769
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  47965823 gagataaagtaaaaagtaatgtgagtatgagagaaaaagttgttgcaaaagttgt 47965769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 14451477 - 14451421
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||| ||| ||||||    
T  14451477 gagataaagtaaaaactaatgtgagtatgagagagaaagttgttgctaaagttgtca 14451421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 21617267 - 21617211
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  21617267 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtaacaaaaattgtca 21617211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 31657730 - 31657657
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  |||||    |  |||||||||||||||||||||    
T  31657730 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 41262349 - 41262389
Alignment:
Q  28 aatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  41262349 aatgtgagtaagagagagaaaattgttgcaaaaattgtcaa 41262389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 46405961 - 46406017
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  46405961 gagataaagtaaaaattaatgtgagtatgagagaaaaagttgttgcaaaagttgtca 46406017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 38338909 - 38338964
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| |||||    
T  38338909 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtc 38338964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 5932154 - 5932200
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  5932154 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 5932200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17683308 - 17683236
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctc 87  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||  || ||| ||  |||||||||||||||||||||    
T  17683308 gagataaagtaaaaagtaatgtgagtataagagagaaagttgt--cataaaatg--aatgttcaaatatcatttctc 17683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 43769795 - 43769720
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||    |  |||||||||||||||||||||||    
T  43769795 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctcttt 43769720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 52846214 - 52846256
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  52846214 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 52846256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 28458364 - 28458421
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| |||||||    
T  28458364 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcaa 28458421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 28657428 - 28657502
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctt 89  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||    |  ||||||||||||||||||||||    
T  28657428 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctctt 28657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 31275213 - 31275151
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaa-ttgtcaatgttcaaatatcatttctcttt 90  Q
    |||||||||||||||||||||| ||||  |||||| |||||| ||| ||||||||||||||||||    
T  31275213 taatgtgagtatgagagagaaagttgt--caaaaagttgtcactgtacaaatatcatttctcttt 31275151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 14527728 - 14527672
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| ||||||||||||||||| |||| |||| |||||| ||||||    
T  14527728 gagataaagtaaaaaataatgtgagtatgagagtgaaagttgtagcaaaagttgtca 14527672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 21260382 - 21260326
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||| ||||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  21260382 gagataaagaaaaaaataatgtgagtatgagagaaaaagttgttgcaaaagttgtca 21260326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 30170007 - 30170063
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| ||||||    
T  30170007 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtca 30170063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 36111393 - 36111437
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  36111393 aaaaagtaatgtgagtatgagagataaagttgttgcaaaagttgt 36111437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 47240879 - 47240843
Alignment:
Q  33 gagtatgagagagaaaattgttgcaaaaattgtcaat 69  Q
    |||||||||||||||| ||||||||||||||||||||    
T  47240879 gagtatgagagagaaagttgttgcaaaaattgtcaat 47240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 51194353 - 51194297
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||||| |||||||||||| ||||||| |||||| |||| ||||||    
T  51194353 gagataaagtaaaaagtgatgtgagtatgaaagagaaagttgttgtaaaagttgtca 51194297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 51887747 - 51887691
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||| ||||||||||||||||| |||| |||||| ||||||    
T  51887747 gagataaagtaaaaaataatttgagtatgagagagaaagttgtagcaaaagttgtca 51887691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 40348872 - 40348825
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||    
T  40348872 aagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaaatt 40348825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 18882962 - 18883004
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||    
T  18882962 gagataaagtaaaaagtattgtgagtatgagagagaaagttgt 18883004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 23822232 - 23822319
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| |||| ||| |||||| |||||| ||||||||||| |||||        ||||||||||||||||||||||||    
T  23822232 gagataaagtaaaaaataatatgaatatgagggagaaagttgttgcaaaagttgtcattaaatgaatgttcaaatatcatttctcttt 23822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 37297127 - 37297047
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa-------tgttcaaatatcatttctctt 89  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||| ||       |||||||||||||||||||||    
T  37297127 aagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcatttctctt 37297047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 54000766 - 54000695
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa--------tgttcaaatatcatttctcttt 90  Q
    |||||||||||||||||||||| |||||  ||||||||||||        ||||||||||||||||||||||    
T  54000766 taatgtgagtatgagagagaaagttgttataaaaattgtcaaaaagtggttgttcaaatatcatttctcttt 54000695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 14010105 - 14010191
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||| ||||||||||||| ||| || ||| |||| ||||||        ||||||||||||||||||||||    
T  14010105 gagataaagtaaaaagtaatatgagtatgagagaaaaagttattgtaaaagttgtcacaaaatggatgttcaaatatcatttctctt 14010191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 53152308 - 53152357
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||| ||| ||||||||| |||||||||||||||    
T  53152308 gagataaagtaaaaaataatatgaatatgagagaaaaaattgttgcaaaa 53152357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 3316429 - 3316377
Alignment:
Q  17 aagtaaaaa-gtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||||||| |||||||  |||||||||||||||||||| ||||| |||||||    
T  3316429 aagtaaaaacgtaatgtatgtatgagagagaaaattgttacaaaagttgtcaa 3316377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 33860730 - 33860675
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||  ||||||||||||    
T  33860730 gagataaagtaaaaa-tgatgtgagtatgagagagaaagttgtcacaaaaattgtca 33860675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 33899313 - 33899369
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||| ||||| ||||||||||||| || ||||| ||||||||||| ||||||    
T  33899313 gagataaagaaaaaaataatgtgagtatgtgaaagaaagttgttgcaaaagttgtca 33899369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 36177984 - 36177948
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattg 52  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36177984 aagtaaaaagataatgtgagtatgagagagaaaattg 36177948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 13347802 - 13347858
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13347802 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtca 13347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 35589374 - 35589430
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35589374 gagataaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttgtca 35589430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 29684600 - 29684686
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctcttt 90  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||    
T  29684600 agataaagtaaaaagtaaggtgagtatgagagagaaagttgttgcaaaaattgtcactaaataaatgttcaaatatcatttctcttt 29684686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 10711808 - 10711731
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctttat 92  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||    |  |||||||||||||||||||||||||    
T  10711808 gagataaagtaaaaagtaatgtgagtatgagagagaaaattgtcacaaaa----tagatgttcaaatatcatttctctttat 10711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 39449351 - 39449295
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  39449351 gagataaagtaaaaagtaatctgagtatgagagagaaagttgttgcaaaagttgtca 39449295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 41569383 - 41569462
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc---aatgttcaaatatcatttctc 87  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||| ||||| || ||   |||||| ||||||||||||||    
T  41569383 gagataaagtaaaaagtaacgtgagtatgagagagaaagttgttacaaaagttttcaataatgttgaaatatcatttctc 41569462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 433934 - 433882
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||||||||||||    
T  433934 gagataaagtaaaaaatgatgtgagtatgagagagaaagttgttgcaaaaatt 433882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 6999055 - 6999111
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  6999055 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtca 6999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16677756 - 16677700
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| ||| | ||||||||||||||||||| ||||||    
T  16677756 gagataaagtaaaaagtaatgtgaatataaaagagaaaattgttgcaaaagttgtca 16677700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 18177024 - 18176968
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||| ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  18177024 gagataaagaaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 18176968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 18723678 - 18723622
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  18723678 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtaacaaaaattgtca 18723622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 36802980 - 36802924
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| |||| |||||| ||||||    
T  36802980 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtca 36802924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 39213757 - 39213813
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  39213757 gagataaagtaaaaaataatgtgagtatgagagataaagttgttgcaaaagttgtca 39213813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 13266029 - 13265975
Alignment:
Q  31 gtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttct 86  Q
    |||||||||||||||||||||||||||||||||||   ||| ||||||||||||||    
T  13266029 gtgagtatgagagagaaaattgttgcaaaaattgt-gttgtacaaatatcatttct 13265975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 17779460 - 17779391
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc---aatgttcaaatatcatttctc 87  Q
    ||||| |||||| ||||||||||| ||| |||||||||||||||||   ||||||||||||| |||||||    
T  17779460 aaaaaataatgtaagtatgagagaaaaagttgttgcaaaaattgtcactaatgttcaaatattatttctc 17779391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 25881628 - 25881573
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  25881628 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaaattgtc 25881573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 9634423 - 9634510
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||  |||||||| |||        |||||||||||||||||||||||    
T  9634423 gagataaagtaaaaagtaatgtgagtatgagagaaaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctcttt 9634510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 29051646 - 29051696
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||| ||||||    
T  29051646 aagtaaaaaataatgtaagtatgaaagagaaaattgttgcaaaagttgtca 29051696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 37257534 - 37257477
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagta-tgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||    
T  37257534 gagataaagtaaaaaataatgtgagtaatgagagagaaagttgttgcaaaagttgtca 37257477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 6170714 - 6170658
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||  ||||| ||||||    
T  6170714 gagataaagtaaaaagtaacgtgagtatgagagagaaagttgtcacaaaagttgtca 6170658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 12889819 - 12889875
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| || |||||| |||||||||||||||||||||| |||| |||||| ||||||    
T  12889819 gagataaattaaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtca 12889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 14233706 - 14233762
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||  ||||| ||||||    
T  14233706 gagataaagtaaaaagtaatatgagtatgagagagaaatttgtcacaaaagttgtca 14233762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 15269945 - 15269889
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| ||||| ||||||| ||||  ||||||||||||    
T  15269945 gagataaagtaaaaagtaatgtgaatatgaaagagaaagttgtcacaaaaattgtca 15269889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 22888814 - 22888866
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||| |||||||||||||||||||||| ||||  |||||||||||||    
T  22888814 aagtaaaaaggtaatgtgagtatgagagagaaagttgtcacaaaaattgtcaa 22888866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 26206931 - 26206875
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| || |  ||||||||||||    
T  26206931 gagataaagtaaaaaataatgtgagtatgagagagaaagttataacaaaaattgtca 26206875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 41195662 - 41195610
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  41195662 aagtaaaaaggtaatgtgagtatgagagagaaaattgtcacaaaagttgtcaa 41195610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 44711976 - 44712032
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| || ||||||||||| ||||||| |||| |||||||||||||    
T  44711976 gagataaagtaaaaaatagtgtgagtatgaaagagaaagttgtagcaaaaattgtca 44712032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 28245812 - 28245757
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| |||||    
T  28245812 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtc 28245757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 23352892 - 23352934
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  23352892 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 23352934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 34119639 - 34119681
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  34119639 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 34119681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 42678833 - 42678791
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  42678833 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 42678791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 9377540 - 9377503
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaa 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  9377540 gagataaagtaaaaagtaatgtgaatatgagagagaaa 9377503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 29712062 - 29712029
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagaga 44  Q
    ||||| ||||||||||||||||||||||||||||    
T  29712062 gagataaagtaaaaagtaatgtgagtatgagaga 29712029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 37737975 - 37738036
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctc 87  Q
    |||||||||||||||||||||||||||| ||||  | ||||| ||   |||||||||||||||||||    
T  37737975 aaaaagtaatgtgagtatgagagagaaagttgt--cgaaaatggt---tgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 40937051 - 40937088
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaa 48  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  40937051 gagataaagtaaaaaataatgtgagtatgagagagaaa 40937088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 1416026 - 1416078
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||  ||||||||    
T  1416026 gagataaattaaaaagtaatgtaagtatgagagaaaaaattgtcacaaaaatt 1416078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 2221077 - 2221021
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||| |||| |||||||||||||||||||||| || |  ||||||||||||    
T  2221077 gagataaagtgaaaaataatgtgagtatgagagagaaagttatcacaaaaattgtca 2221021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 2841918 - 2841862
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||| ||||| ||||  ||||| ||||||    
T  2841918 gagataaagtaaaaaataatgtgagtatgagaaagaaagttgtaacaaaagttgtca 2841862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 4952467 - 4952519
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| ||||||||| |||||||| ||||| | ||||| ||||||||||||||    
T  4952467 gagataaagtaaaaaataatgtgaatatgaaatagaaagttgttgcaaaaatt 4952519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 11385002 - 11385057
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |  ||||||||||||    
T  11385002 gagataaagtaaaaa-tgatgtgagtatgagagagaaaattatcacaaaaattgtca 11385057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 26738867 - 26738923
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| || |||||| |||||| ||||||||| ||||| ||||||||||| ||||||    
T  26738867 gagataaaataaaaaataatgtaagtatgagaaagaaagttgttgcaaaagttgtca 26738923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 35705578 - 35705538
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaatt 51  Q
    ||||| ||||||||  |||||||||||||||||||||||||    
T  35705578 gagataaagtaaaatataatgtgagtatgagagagaaaatt 35705538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 34018886 - 34018836
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34018886 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttgtca 34018836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 33589217 - 33589273
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  33589217 gagataaagtaaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgtca 33589273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 7955994 - 7956049
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  7955994 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtc 7956049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 41521052 - 41520964
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttta 91  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||        ||||||||||||||||||||||||    
T  41521052 gagataaagtaaaaaataatgtgagtatgagagagaaaattgttgcaaaagttatcactaaatggatgttcaaatatcatttctcttta 41520964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 36110222 - 36110135
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| || |||        |||||||||||||||||||||||    
T  36110222 gagataaagtaaaaagtaatgtgagtatgaaagagaaaattgttgcaaaagttttcactaaatggatgttcaaatatcatttctcttt 36110135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 1633877 - 1633933
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  1633877 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 1633933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 11017889 - 11017833
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  11017889 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 11017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 11657987 - 11658043
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  11657987 gagataaaataaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 11658043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 16872143 - 16872199
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  16872143 gagataaagtaaaaagtaatgtgagtatgatagagaaagttgttgcaaaagttgtca 16872199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 30136002 - 30136058
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  30136002 gagataaagtaaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgtca 30136058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 37783958 - 37784014
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  37783958 gagataaagtaaaaagtaatctgagtatgagagagaaagttgttgcaaaagttgtca 37784014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 45529233 - 45529289
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  45529233 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttacaaaaattgtca 45529289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 16327139 - 16327194
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  16327139 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcgcaaaagttgtc 16327194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 35564372 - 35564280
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctttatctaa 96  Q
    |||| ||||||||| |||||||||||||||| ||||| |||||||||||||| |||        |||||||||||||||||||||||| ||||    
T  35564372 agataaagtaaaaaataatgtgagtatgagatagaaagttgttgcaaaaattatcactaaatggatgttcaaatatcatttctctttagctaa 35564280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 6991795 - 6991882
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| ||||||||||||||||||||||||| |  ||||||||||||        |||||||||||||||||||||||    
T  6991795 gagataaagtaaaaaataatgtgagtatgagagagaaaattatcacaaaaattgtcaccaaatagatgttcaaatatcatttctcttt 6991882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 5277691 - 5277780
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctttat 92  Q
    ||||| || |||||| ||||||||||||||||||||||||||| |||||  ||||||        |||||||||||||||||||||||||    
T  5277691 gagataaaataaaaaataatgtgagtatgagagagaaaattgtagcaaaggttgtcacaaaatggatgttcaaatatcatttctctttat 5277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 5864286 - 5864201
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctctt 89  Q
    |||| ||||||||| |||||||| ||||||||||||||||||| |||||||| ||        |||||||||||||||||||||||    
T  5864286 agataaagtaaaaaataatgtgattatgagagagaaaattgttacaaaaattatcactagatgaatgttcaaatatcatttctctt 5864201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 9549186 - 9549242
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||||||||  ||||| ||||||    
T  9549186 gagataaagtaaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgtca 9549242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16613718 - 16613662
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||| ||| |||| |||||||||||||    
T  16613718 gagataaagtaaaaaataatgtgagtatgagagaaaaagttgtagcaaaaattgtca 16613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16966869 - 16966813
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||| ||| |||||||||||||||||||||| ||||||||||| ||||||    
T  16966869 gagataaagtagaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 16966813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 31597032 - 31596976
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||| | ||||  ||||||||||||    
T  31597032 gagataaagtaaaaagtaatgtgagtatgagagagagagttgtcacaaaaattgtca 31596976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 40739899 - 40739955
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  40739899 gagataaagtaaaaaataatgtgaatatgagagaaaaaattgttgcaaaagttgtca 40739955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 42569716 - 42569789
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||  || ||| ||  ||||||||||||||||||||||    
T  42569716 gagataaagtaaaaagtaatgtgaatatgagagagaaagttgt--cataaaatg--aatgttcaaatatcatttctct 42569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 7473013 - 7473050
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaa 48  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  7473013 gagataaagtaaaaagtaatgtgagtatgagagagaaa 7473050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 30439493 - 30439567
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctt 89  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||    |  ||||||||||||||||||||||    
T  30439493 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctctt 30439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 7592933 - 7592877
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||| ||||||||| ||| ||||||||||| ||||||    
T  7592933 gagataaagtaaaaaataatgtgactatgagagataaagttgttgcaaaagttgtca 7592877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 12707233 - 12707177
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| || |||||||||| |||||||||||||||||| |||| |||||| ||||||    
T  12707233 gagataaattaaaaagtaacgtgagtatgagagagaaagttgtcgcaaaagttgtca 12707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 34718199 - 34718143
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| ||||||    
T  34718199 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgtca 34718143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 34490146 - 34490200
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    |||| ||||||||| |||||||||||| ||||||||| ||||||||||| ||||||    
T  34490146 agataaagtaaaaa-taatgtgagtataagagagaaagttgttgcaaaagttgtca 34490200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 41159876 - 41159931
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| |||||    
T  41159876 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtc 41159931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 18651454 - 18651412
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| | |||||||||||||||||||||||||    
T  18651454 gagataaagtaaaaaatgatgtgagtatgagagagaaaattgt 18651412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 32847684 - 32847730
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||| ||||||||| ||||||||||| ||||||    
T  32847684 aaaaaataatgtgagtataagagagaaagttgttgcaaaagttgtca 32847730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 2730953 - 2731035
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa--------tgttcaaatatcatttctcttt 90  Q
    |||||||||| |||||||| ||||||||||||| ||||| ||||| |||||||        ||||||||||||||||||||||    
T  2730953 aagtaaaaagataatgtgaatatgagagagaaagttgttacaaaagttgtcaaaaagtggttgttcaaatatcatttctcttt 2731035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 4658250 - 4658336
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||||  ||||| ||||||        ||||||||||||||||||||||    
T  4658250 gagataaagtaaaaagtaatgtaagtatgagagaaaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctctt 4658336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 4994465 - 4994408
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| ||||||||| |||||||||||||||||| ||| || |  |||||||||||||    
T  4994465 gagataaagtaaaaaataatgtgagtatgagagataaagttatcacaaaaattgtcaa 4994408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 24798361 - 24798402
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||||||||||||||| |||||  ||||||||||||    
T  24798361 taatgtgagtatgagagagaaagttgttaaaaaaattgtcaa 24798402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 32501194 - 32501227
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgtt 54  Q
    ||||| ||||||||||||||||||||||||||||    
T  32501194 aaaaaataatgtgagtatgagagagaaaattgtt 32501227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 6968230 - 6968262
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||||||||||||||||||||||||||| ||||    
T  6968230 aaaaagtaatgtgagtatgagagagaaagttgt 6968262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 33605082 - 33605114
Alignment:
Q  28 aatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||||||||||||||||||||||||| |||||    
T  33605082 aatgtgagtatgagagagaaaattgttccaaaa 33605114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 21822586 - 21822673
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||    
T  21822586 gagataaagtaaaaagtaatgcgagtatgagagagaacattgttgcaaaaattgtcacaaaatagatgttcaaatatcatttctcttt 21822673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 32815252 - 32815196
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  32815252 gagataaagtaaaaaataatgtgagtatgagagaaaaaattgttgcaaaaattgtca 32815196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 37808751 - 37808807
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  37808751 gagataaagtaaaaaataatgtaagtatgagagagaaaattgttgcaaaaattgtca 37808807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 16980381 - 16980294
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||        ||||||||||||||||||||||||    
T  16980381 gagataaagtaaaaagtaatgtgagtataagagagaaagttgttgcaaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 16980294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 39231715 - 39231802
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||        |||||||||||||||||||||||    
T  39231715 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaactggatgttcaaatatcatttctcttt 39231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 13163003 - 13162917
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||        ||||||||||||||||||||||    
T  13163003 gagataaagtaaaaagtaatatgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctt 13162917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 3343317 - 3343373
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  3343317 gagataaagtaaaaagtaatgtgaatatgagagagaaaattgtcacaaaaattgtca 3343373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 11352961 - 11353035
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  | |||||||   ||||||||||||||||||||||    
T  11352961 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac-aaaattg---atgttcaaatatcatttctctt 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 19786066 - 19786122
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  19786066 gagataaagtaaaaagtaatgtgagtatgtgagagaaagttgttgcaaaagttgtca 19786122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 43573530 - 43573586
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  43573530 gagataaagtaaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgtca 43573586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 29162963 - 29163017
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  29162963 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgtaaaagttgt 29163017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 13729810 - 13729724
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| ||||||||| |||||||||||||||| ||||| ||||||||||| ||||||        ||||||||||||||||||||||    
T  13729810 gagataaagtaaaaaataatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctctt 13729724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 38779731 - 38779780
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||||    
T  38779731 gagatgaagtaaaaaataatgtgagtatgagagaaaaagttgttgcaaaa 38779780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 28036828 - 28036772
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||| ||||||||| ||||||||||| ||||||    
T  28036828 gagataaagtaaaaaataatgtgagtataagagagaaagttgttgcaaaagttgtca 28036772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 29002692 - 29002636
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||| || |||||||||| ||||||||||| ||||||    
T  29002692 gagataaagtaaaaagtaatgtgattacgagagagaaagttgttgcaaaagttgtca 29002636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 39332069 - 39332013
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||| ||||| ||||||    
T  39332069 gagataaagtaaaaagtaatgtgagtataagagagaaagttgttacaaaagttgtca 39332013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 40353348 - 40353296
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| || |||||| |||||||||||||||||||||| ||||||||||||||    
T  40353348 gagataaaataaaaaataatgtgagtatgagagagaaagttgttgcaaaaatt 40353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 44184546 - 44184635
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctctttat 92  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| |||||         |||||||||||||||||||||||||    
T  44184546 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttctctttat 44184635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 46773650 - 46773715
Alignment:
Q  32 tgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  46773650 tgagtatgagagagaaaattgttgcaaaaattgtcactgaatggatgttcaaatatcatttctctt 46773715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 41893999 - 41893911
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttta 91  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||  ||||| ||||||        ||||||||||||||||||||||||    
T  41893999 gagataaagtaaaaagtaatgtgagtatgaaagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctcttta 41893911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 33180697 - 33180739
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||||||||    
T  33180697 gagataaagtaaaaaataatgtgagtatgagagagaaaattgt 33180739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 41458674 - 41458624
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||||||| |||||||||||||||||||||| ||| | ||||||||||||    
T  41458674 aagtaaaaaataatgtgagtatgagagagaaagttgctacaaaaattgtca 41458624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21559882 - 21559796
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| ||||||||| |||||||||||||||||| ||| |||| |||||| ||||||        ||||||||||||||||||||||    
T  21559882 gagataaagtaaaaaataatgtgagtatgagagataaagttgtagcaaaagttgtcacagaatggatgttcaaatatcatttctctt 21559796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 10055619 - 10055675
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||| |||||||||   ||||||||||||    
T  10055619 gagataaagtaaaaaataatgtgagtatgagaaagaaaattgccacaaaaattgtca 10055675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 11564977 - 11564921
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| || | |||||| ||||||    
T  11564977 gagataaagtaaaaaataatgtgagtatgagagagaaagttatagcaaaagttgtca 11564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 26749077 - 26749014
Alignment:
Q  22 aaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctcttt 90  Q
    |||| ||| |||||||||||||||||| ||||  ||||||||||   ||||||||||||||||||||||    
T  26749077 aaaaataaagtgagtatgagagagaaagttgt--caaaaattgt---tgttcaaatatcatttctcttt 26749014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 3062414 - 3062372
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||    
T  3062414 gagataaagtaaaaagtaatgtgagtataagagagaaagttgt 3062372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 7295518 - 7295480
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  7295518 taatgtgagtatgagagagaaagttgttccaaaaattgt 7295480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 41025838 - 41025759
Alignment:
Q  18 agtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    |||||||| |||||||| ||||| |||||||||| ||||||||||| |||        ||||||||||||||||||||||    
T  41025838 agtaaaaaataatgtgactatgaaagagaaaattattgcaaaaattatcactaaatagatgttcaaatatcatttctctt 41025759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 41402581 - 41402535
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||| ||||||||||||||||| ||||||||||| ||||||    
T  41402581 aaaaaataatatgagtatgagagagaaagttgttgcaaaagttgtca 41402535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 47078238 - 47078280
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  47078238 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 47078280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18111598 - 18111651
Alignment:
Q  11 gagatgaagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| |||||||||  |||||||||||||||||||||||||||  ||||||||    
T  18111598 gagataaagtaaaaatataatgtgagtatgagagagaaaattgtcacaaaaatt 18111651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 31844592 - 31844675
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca-------atgttcaaatatcatttctc 87  Q
    ||||| ||||||||| |||||||||||| | ||||||||||||   |||||||||||       ||||||||||||||||||||    
T  31844592 gagataaagtaaaaaataatgtgagtataaaagagaaaattgtcataaaaattgtcacaaatggatgttcaaatatcatttctc 31844675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 34978364 - 34978323
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||||||||||||||| ||||  |||||||||||||    
T  34978364 taatgtgagtatgagagagaaagttgtcacaaaaattgtcaa 34978323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 35452560 - 35452612
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||  ||||||||    
T  35452560 gagataaagtaaaaaattatgtgagtatgagagagaaagttgtcacaaaaatt 35452612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 8675420 - 8675507
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||        |||||||||||||||||||||||    
T  8675420 gagataaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttatcacaaaatggatgttcaaatatcatttctcttt 8675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 8267807 - 8267863
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  8267807 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaaattgtca 8267863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 21064213 - 21064269
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  21064213 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 21064269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 43441822 - 43441768
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  43441822 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 43441768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 5042332 - 5042246
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||        ||||||||||||||||||||||    
T  5042332 gagataaagtaaaaaataatgtgagtatgagagataaagttgttgcaaaaattgtcactaaatggatgttcaaatatcatttctctt 5042246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 9977203 - 9977117
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||        ||||||||||||||||||||||    
T  9977203 gagataaagtaaaaagtaatgtgagtatgattgagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctt 9977117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 32912116 - 32912034
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctcttta 91  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||        |||||||||||||||||||||||||    
T  32912116 aagtaaaaagtaatgtgagtatgagagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctcttta 32912034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 5821599 - 5821655
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  5821599 gagataaagtaaaaaataatgtaagtatgagagaaaaaattgttgcaaaaattgtca 5821655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 35098992 - 35099048
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  35098992 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 35099048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 2688973 - 2689047
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttct 86  Q
    ||||| ||||||||| |||||| | ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||    
T  2688973 gagataaagtaaaaaataatgtaaatatgaaagagaaagttgttgcaaaagttgtc-atgttcaaatatcatttct 2689047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 15478742 - 15478693
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  15478742 gagataaagtaaaaaataatgtgagtatgagagagaaaattattgcaaaa 15478693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 18842308 - 18842357
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  18842308 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaa 18842357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 6517796 - 6517740
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  6517796 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtca 6517740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 25871433 - 25871489
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| | |||||||||||||    
T  25871433 gagataaagtaaaaaataatgtgagcatgagagagaaaattatagcaaaaattgtca 25871489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 19481169 - 19481257
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttta 91  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| || |||        ||||||||||||||||||||||||    
T  19481169 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctcttta 19481257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 19839979 - 19840059
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctctt 89  Q
    ||||||||| |||||||||||||||||||||| ||||  |||||||||||        |||||||||||||||||||||||    
T  19839979 aagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctctt 19840059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 23126340 - 23126416
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| ||||||||||||| |||||||||||||||||||| ||||||        ||||||||||||||||||||||    
T  23126340 aaaaaataatgtgagtatgggagagaaaattgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctt 23126416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 189690 - 189732
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  189690 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 189732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 34124699 - 34124665
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaatt 51  Q
    |||||||||||||||||||||||||||||||||||    
T  34124699 aagtaaaaagtaatgtgagtatgagagagaaaatt 34124665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 34270411 - 34270336
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||  ||||    ||  |||||||||||||||||||||||    
T  34270411 gagataaagtaaaaaataatgggagtatgagagagaaaattgtcacaaa----gtggatgttcaaatatcatttctcttt 34270336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 38704190 - 38704236
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  38704190 aagtaaaaaataatgtgagtatgatagaaaaaattgttgcaaaaatt 38704236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 43214046 - 43214088
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  43214046 gagataaagtaaaaagtaatgtgagtatgagtgagaaaattgt 43214088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 6446511 - 6446560
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    |||||||||||||||||||||||||||||||| ||||  ||||| |||||    
T  6446511 aagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtc 6446560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 16437562 - 16437607
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||    
T  16437562 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtc 16437607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 20770215 - 20770158
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| |||||||    
T  20770215 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcaa 20770158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 22649654 - 22649703
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  22649654 aagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaaattgt 22649703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 3640185 - 3640258
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctt 89  Q
    |||| ||||||||| |||||||||||||||||||||| ||||  |||||    |  ||||||||||||||||||||||    
T  3640185 agataaagtaaaaaataatgtgagtatgagagagaaagttgtctcaaaa----tagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 4430923 - 4430979
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| | |||||||||||||||| ||| ||||||||||| ||||||    
T  4430923 gagataaagtaaaaaatgatgtgagtatgagagaaaaagttgttgcaaaagttgtca 4430979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 10649519 - 10649463
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||  ||||| ||||||    
T  10649519 gagataaagtaaaaagtaatgtgagtatgaaagagaaagttgtcacaaaagttgtca 10649463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 15267868 - 15267812
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||| ||| ||||||||||||| ||||||||||| ||||||    
T  15267868 gagataaagtaaaaaataatatgaatatgagagagaaagttgttgcaaaagttgtca 15267812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 33620692 - 33620636
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||| | ||||||||||| ||||||||||||||| ||||||    
T  33620692 gagataaagtaaaaaataatataagtatgagagaaaaaattgttgcaaaagttgtca 33620636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 39088855 - 39088910
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgag-tatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  39088855 gagataaagtaaaaa-taatgtgaggtatgagagagaaaattgttgcaaaagttgtc 39088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 43196612 - 43196668
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||| ||||| ||||  ||||||||||||    
T  43196612 gagataaagtaaaaaataatgtgagtatgagaaagaaagttgtaacaaaaattgtca 43196668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 18660837 - 18660757
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa-------tgttcaaatatcatttctctt 89  Q
    |||||||||| ||| |||||||||||||||||||||||  ||||| |||||||       |||||||||||||||||||||    
T  18660837 aagtaaaaagataacgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaatggttgttcaaatatcatttctctt 18660757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 41175693 - 41175735
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  41175693 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 41175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 1839333 - 1839374
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||| ||||||||| |||||||||||||||||||||| ||||    
T  1839333 agataaagtaaaaaataatgtgagtatgagagagaaagttgt 1839374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 6931046 - 6931095
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||||||||||||| ||| ||| |||||||||||    
T  6931046 gagataaagtaaaaaataatgtgagtatgaaagataaagttgttgcaaaa 6931095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 6292205 - 6292157
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaa 59  Q
    ||||| ||||||||| |||||||||||| ||||||||| |||| |||||    
T  6292205 gagataaagtaaaaaataatgtgagtataagagagaaagttgtagcaaa 6292157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 42446295 - 42446335
Alignment:
Q  28 aatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  42446295 aatgtgagtaagagagagaaagttgttgcaaaagttgtcaa 42446335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 38303675 - 38303755
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctttatct 94  Q
    ||||| ||||||||| ||||| |||||||||||||||| |||||| |||| |||   |||||||||||||||||||||||||||    
T  38303675 gagataaagtaaaaaataatgcgagtatgagagagaaagttgttgtaaaagttg---atgttcaaatatcatttctctttatct 38303755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 36577399 - 36577455
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  36577399 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 36577455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 20565105 - 20565159
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20565105 gagataaagtaaagagtaatgtgagtatgagagagaaagttgttgcaaaaattgt 20565159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26837536 - 26837482
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26837536 gagataaagtaaaaagtaacgtgagtatgagagagaaaattgttgcaaaagttgt 26837482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29586077 - 29586023
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29586077 gagataaagtaaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgt 29586023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 44294093 - 44294043
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  44294093 aagtaaaaaataatgtgagtatgagagagaaaattattgcaaaaattgtca 44294043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 32915059 - 32915153
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctttatctaat 97  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||        ||||||||||||||||||||||||| ||||    
T  32915059 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctctttatttaat 32915153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 46082108 - 46082194
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||        ||||||||||||||||||||||    
T  46082108 gagataaagtaaaaagtaatgtgagtatgcgagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctt 46082194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 902722 - 902633
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctttat 92  Q
    ||||| |||||||||||||||||||||||||||||||| |||||  |||| ||||||        |||||||||||||||||||||||||    
T  902722 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgttataaaagttgtcactaaatagatgttcaaatatcatttctctttat 902633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 3603195 - 3603139
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  3603195 gagataaactaaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 3603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 8411705 - 8411761
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  8411705 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 8411761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 9008309 - 9008253
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  9008309 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 9008253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 21340606 - 21340550
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  21340606 gagataaagtaaaaagtaatgtgagtatgaaagagaaagttgttgcaaaagttgtca 21340550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 35136928 - 35136872
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  35136928 gagataaagtaaaaagtaatgtgagtatgagaaagaaagttgttgcaaaagttgtca 35136872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 1790586 - 1790506
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctctt 89  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||||        |||||||||||||||||||||||    
T  1790586 aagtaaaaagtaatttgagtatgagagagaaagttgttgcaaaagttgtcaccaaatgaatgttcaaatatcatttctctt 1790506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 15705055 - 15705139
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctttatc 93  Q
    |||||||||||||||||||||||||||||||| ||||  ||||| ||||||        ||||||||||||||||||||||||||    
T  15705055 aagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctctttatc 15705139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 40316931 - 40316973
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  40316931 gagataaagtaaaaagtaatgtgagtatgagagagaaaattgt 40316973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 10890033 - 10890119
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||        ||||||||||||||||||||||    
T  10890033 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctctt 10890119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 756940 - 756884
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||| ||||| ||||||||||| ||||||    
T  756940 gagataaagtaaaaaataatgtgagtatgagaaagaaagttgttgcaaaagttgtca 756884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 13489746 - 13489690
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  13489746 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgtca 13489690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 33024558 - 33024614
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||| ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  33024558 gagataaagaaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 33024614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 33054075 - 33054131
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| |||| |||||| ||||||    
T  33054075 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtca 33054131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 50328128 - 50328184
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||||||| |||||||||| ||||||| ||||||||||| ||||||    
T  50328128 gagataaagtaaaaagtaacgtgagtatgaaagagaaagttgttgcaaaagttgtca 50328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 50781557 - 50781631
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctctt 89  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  || ||| ||   ||||||||||||||||||||||    
T  50781557 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgt--cataaaatg--gatgttcaaatatcatttctctt 50781631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18336230 - 18336158
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctc 87  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||    | |||||||||||||||||||||    
T  18336230 gagataaagtaaaaactaatgtgagtatgagagagaaagttgtcacaaaa----tgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 1852948 - 1852994
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  1852948 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtca 1852994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 19969549 - 19969591
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  19969549 gagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 19969591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 46172394 - 46172478
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca-------atgttcaaatatcatttctct 88  Q
    ||||| || |||||| ||||||||||||||||||||||||| || ||||| ||||||       |||||||||||||||||||||    
T  46172394 gagataaaataaaaaataatgtgagtatgagagagaaaattattacaaaagttgtcactaatggatgttcaaatatcatttctct 46172478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 47398455 - 47398511
Alignment:
Q  27 taatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctc 87  Q
    |||||||||||||||||||||||||||  |||||| ||  |||||||||||||||||||||    
T  47398455 taatgtgagtatgagagagaaaattgt--caaaaaatg--aatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 52362566 - 52362479
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| ||||||        |||||||||||||||||||||||    
T  52362566 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctcttt 52362479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 34040487 - 34040536
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||| ||||    
T  34040487 gagataaagtaaaaaataatgtgagtatgagagagaaagttgttgtaaaa 34040536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 36779256 - 36779313
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| |||||||||||||||| ||||||||| | ||| |||||||||||||| ||||    
T  36779256 gagataaagtaaaaagtaatgtaagtatgagaaaaaaagttgttgcaaaaattatcaa 36779313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 50824825 - 50824768
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||  |||||||| ||||    
T  50824825 gagataaagtaaaaaataatatgagtatgagagagaaaattgtcacaaaaattatcaa 50824768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 3024737 - 3024785
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaa 59  Q
    ||||| ||||||||| |||| |||||||||||||||||||| |||||||    
T  3024737 gagataaagtaaaaaataatatgagtatgagagagaaaattattgcaaa 3024785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 8200153 - 8200084
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctcttt 90  Q
    ||||||||| |||||||||||||||||||||| ||||  |||||    |  |||||||||||||||||||||||    
T  8200153 aagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctcttt 8200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 47214292 - 47214236
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| ||||||    
T  47214292 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtca 47214236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 48220131 - 48220204
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  |||||    |  |||||||||||||||||||||    
T  48220131 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaa----tggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 51191872 - 51191816
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||| ||||||||||||||||||| ||| ||||| ||||| ||||||    
T  51191872 gagataaagtaaaatgtaatgtgagtatgagagaaaaagttgttacaaaagttgtca 51191816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 49241493 - 49241565
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatgttcaaatatcatttctct 88  Q
    |||| ||||||||| |||||||||||||||||||||| ||||  ||||    ||  |||||||||||||||||||||    
T  49241493 agataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaa----gtggatgttcaaatatcatttctct 49241565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 25259161 - 25259115
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaatt 63  Q
    ||||||||| |||| ||||||| ||||| ||||||||||||||||||    
T  25259161 aagtaaaaaataatttgagtataagagataaaattgttgcaaaaatt 25259115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 26585872 - 26585922
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||||||| ||||||||||||  |||||||| ||||||||||| ||||||    
T  26585872 aagtaaaaaataatgtgagtataggagagaaagttgttgcaaaagttgtca 26585922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 32319296 - 32319338
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||||||||| |||| |||||||||||||||||||||| ||||    
T  32319296 gagatgaagtgaaaaataatgtgagtatgagagagaaagttgt 32319338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 34254338 - 34254380
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  34254338 gagataaagtaaaaagtaatgtgagtatgagagataaagttgt 34254380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 44632612 - 44632570
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||    
T  44632612 gagataaagtaaaaaataatgtgagtatgagagagaaagttgt 44632570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 48326041 - 48325995
Alignment:
Q  21 aaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||| ||||||||||||||| ||||||||||| ||||||    
T  48326041 aaaaaataatgtaagtatgagagagaaagttgttgcaaaagttgtca 48325995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 50775143 - 50775201
Alignment:
Q  11 gagatgaagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaaattgtcaa 68  Q
    ||||| |||||||||  |||||||||||||||||||||| ||||  |||||||||||||    
T  50775143 gagataaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaaattgtcaa 50775201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 52714888 - 52714930
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||    
T  52714888 gagataaagtaaaaagtaacgtgagtatgagaaagaaaattgt 52714930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 4514442 - 4514495
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    |||| ||||||||| |||||||| ||||||| ||||| ||||||||||| ||||    
T  4514442 agataaagtaaaaaataatgtgaatatgagatagaaagttgttgcaaaagttgt 4514495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 16987021 - 16986980
Alignment:
Q  12 agatgaagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    |||| ||||||||| |||||||||||||||||||||| ||||    
T  16987021 agataaagtaaaaaataatgtgagtatgagagagaaagttgt 16986980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 21486304 - 21486341
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaa 48  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  21486304 gagataaagtaaaaaataatgtgagtatgagagagaaa 21486341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 47215727 - 47215772
Alignment:
Q  22 aaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    |||| |||||||||||||||||||||||||||  ||||| ||||||    
T  47215727 aaaaataatgtgagtatgagagagaaaattgtcacaaaagttgtca 47215772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 48470717 - 48470680
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgt 53  Q
    |||||||||| |||||||||||||||||||||||||||    
T  48470717 aagtaaaaaggtaatgtgagtatgagagagaaaattgt 48470680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 51286354 - 51286440
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctctt 89  Q
    ||||| || |||||| |||||||||||||||||||||| ||||  ||||| |||||        |||||||||||||||||||||||    
T  51286354 gagataaaataaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttctctt 51286440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 52267276 - 52267231
Alignment:
Q  22 aaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    |||| |||||||||||||||||||||| ||||  ||||||||||||    
T  52267276 aaaaataatgtgagtatgagagagaaagttgtcacaaaaattgtca 52267231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 7128202 - 7128146
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||| ||| |||||||| |||||||||| || ||||||||||| ||||||    
T  7128202 gagataaagtagaaaataatgtgaatatgagagaggaagttgttgcaaaagttgtca 7128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 29154858 - 29154822
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgt 53  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  29154858 aagtaaaaaataatgtgagtatgagagagaaagttgt 29154822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 29359717 - 29359673
Alignment:
Q  17 aagtaaaaag-taatgtgagtatgagagagaaaattgttgcaaaa 60  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||    
T  29359717 aagtaaaaagataatgtgagtatgagagagaaagttgttacaaaa 29359673  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 38713654 - 38713598
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||| |||| ||| ||||||||||||| ||||  ||||||||||||    
T  38713654 gagataaagtaaaaaataatatgaatatgagagagaaagttgtcacaaaaattgtca 38713598  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 46543429 - 46543469
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaatt 51  Q
    ||||| ||||||||| || ||||||||||||||||||||||    
T  46543429 gagataaagtaaaaaatagtgtgagtatgagagagaaaatt 46543469  T

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Target: scaffold0471 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 91 - 4
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca--------atgttcaaatatcatttctcttt 90  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| || |||        |||||||||||||||||||||||    
T  91 gagataaagtaaaaagtaatgtgagtatgaaagagaaaattgttgcaaaagttttcactaaatggatgttcaaatatcatttctcttt 4  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 19720 - 19664
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  19720 gagataaagtaaagagtaatgtgagtatgagagagaaagttgttgcaaaagttgtca 19664  T

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Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 8292 - 8211
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc--------aatgttcaaatatcatttctcttt 90  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||| |||||        ||||||||||||||||||||||||    
T  8292 aagtaaaaagtaatatgaatatgagagagaaagttgttgcaaaagttgtcataaaatgaatgttcaaatatcatttctcttt 8211  T

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Target: scaffold0449 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 9287 - 9231
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| |||||||||||||| ||||||| ||||||||| ||||| ||||| ||||||    
T  9287 gagataaagtaaaaagtaatatgagtataagagagaaagttgtttcaaaagttgtca 9231  T

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Target: scaffold0532 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 11048 - 10993
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtc 66  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||  ||||| |||||    
T  11048 gagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgtc 10993  T

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Target: scaffold0687 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 2281 - 2227
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgt 65  Q
    ||||| ||||||||| |||||||| ||||||||| ||| ||||||||||| ||||    
T  2281 gagataaagtaaaaaataatgtgactatgagagataaagttgttgcaaaagttgt 2227  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 122909 - 122856
Alignment:
Q  17 aagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtcaatg 70  Q
    ||||||||| |||||| |||||||| |||||| ||||||||||| || ||||||    
T  122909 aagtaaaaaataatgtaagtatgagtgagaaagttgttgcaaaagttatcaatg 122856  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 38509 - 38453
Alignment:
Q  11 gagatgaagtaaaaagtaatgtgagtatgagagagaaaattgttgcaaaaattgtca 67  Q
    ||||| ||||||||||||| |||||||||||| ||||| ||||  ||||| ||||||    
T  38509 gagataaagtaaaaagtaacgtgagtatgagaaagaaagttgtcacaaaagttgtca 38453  T

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