View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1715_low_99 (Length: 336)
Name: NF1715_low_99
Description: NF1715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1715_low_99 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 18 - 331
Target Start/End: Complemental strand, 39538374 - 39538061
Alignment:
| Q |
18 |
ttgtgaagtaaagaactaaagattgttaaatgcttgggctgaacttgcaggaaatgagaacccgaggtgttgttgagaataagttggttcttttgaaagg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
39538374 |
ttgtgaagtaaagaactaaagattgttaaatccttggactgaacttgcaggaaatgagaacccgaggtgttgttgagaatatgttggttcttttgaaagg |
39538275 |
T |
 |
| Q |
118 |
tctcagtggagctttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaact |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39538274 |
tctcagtggagctttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaact |
39538175 |
T |
 |
| Q |
218 |
ggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccatt |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |
|
|
| T |
39538174 |
ggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttcaggatactgtgagcaaactgatatccatt |
39538075 |
T |
 |
| Q |
318 |
ctccctatgctact |
331 |
Q |
| |
|
|||| |||| |||| |
|
|
| T |
39538074 |
ctccttatgttact |
39538061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 43 - 321
Target Start/End: Complemental strand, 39547807 - 39547529
Alignment:
| Q |
43 |
ttaaatgcttgggctgaacttgcaggaaatgagaacccgaggtgttgttgagaataagttggttcttttgaaaggtctcagtggagctttcagaccaggt |
142 |
Q |
| |
|
|||||| |||| ||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||| ||| |
|
|
| T |
39547807 |
ttaaatacttgaactgaactcgcaggaaatgcgaaaccgaggtgttgttgaggataagttggttcttttgaagggtgtaagtggagctttcagacctggt |
39547708 |
T |
 |
| Q |
143 |
gttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatca |
242 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39547707 |
gttctcactgctctgatgggtgtgactggtgcaggcaaaacaactctgatggatgtactttctggtagaaaaactggtggatatattggtgggaacatca |
39547608 |
T |
 |
| Q |
243 |
caatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccattctcc |
321 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |
|
|
| T |
39547607 |
caatatctggctatccaaagaagcaagatacctttgcaagaatttcaggatactgtgagcaaactgatatccattctcc |
39547529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 56 - 321
Target Start/End: Original strand, 39365880 - 39366145
Alignment:
| Q |
56 |
ctgaacttgcaggaaatgagaacccgaggtgttgttgagaataagttggttcttttgaaaggtctcagtggagctttcagaccaggtgttctcactgctc |
155 |
Q |
| |
|
||||| || ||||||||||||| |||||||||| ||||| ||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
39365880 |
ctgaaattacaggaaatgagaaaccgaggtgttattgaggataagttagttcttctgaagggtcttagtggagctttcagaccaggtgttctcacggctc |
39365979 |
T |
 |
| Q |
156 |
tgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatttctggcta |
255 |
Q |
| |
|
||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39365980 |
tgatgggtgtgaccggtgctggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatatctggcta |
39366079 |
T |
 |
| Q |
256 |
tccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccattctcc |
321 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||| |
|
|
| T |
39366080 |
tccaaagaagcaagaaacctttgcaagaatttctggatactgcgagcaaactgatatccattctcc |
39366145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 39338514 - 39338792
Alignment:
| Q |
43 |
ttaaatgcttgggctgaacttgcaggaaatgagaacccgaggtgttgttgagaataagttggttcttttgaaaggtctcagtggagctttcagaccaggt |
142 |
Q |
| |
|
|||||| ||||| ||| | |||||||||||||||| | |||||||| ||||| ||||||| ||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
39338514 |
ttaaatacttggactggatttgcaggaaatgagaaacagaggtgttcttgaggataagttagttcttttgaagggtgtaagtggagctttcagaccaggt |
39338613 |
T |
 |
| Q |
143 |
gttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatca |
242 |
Q |
| |
|
|||||||| |||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39338614 |
gttctcaccgctctgatgggcatcaccggtgctgggaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatca |
39338713 |
T |
 |
| Q |
243 |
caatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccattctcc |
321 |
Q |
| |
|
|||||| |||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
39338714 |
aaatttccggctttccaaagaagcaagaaacctttgcaagaatttctggatactgtgagcaaactgatatccattctcc |
39338792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 56 - 331
Target Start/End: Complemental strand, 39564576 - 39564298
Alignment:
| Q |
56 |
ctgaacttgcaggaaatg---agaacccgaggtgttgttgagaataagttggttcttttgaaaggtctcagtggagctttcagaccaggtgttctcactg |
152 |
Q |
| |
|
|||||||||||||||||| |||| || ||||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||| |
|
|
| T |
39564576 |
ctgaacttgcaggaaatgcgaagaaacctaggtgttgttgaggataagttggttcttttgaagggtgtaagtggagctttcagacctggtgttctcactg |
39564477 |
T |
 |
| Q |
153 |
ctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatttctgg |
252 |
Q |
| |
|
|||| ||||| || || ||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| || |
|
|
| T |
39564476 |
ctctaatgggtgtgaccggtgctggcaaaacaactctgatggatgtgctttctggtaggaaaaccggaggatatattggtgggaacatcacaatttccgg |
39564377 |
T |
 |
| Q |
253 |
ctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccattctccctatgctact |
331 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |
|
|
| T |
39564376 |
ctttccaaagaagcaagaaacctttgcaagaatttctgggtactgtgagcaaaatgatatccactctccttatgttact |
39564298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 45 - 331
Target Start/End: Original strand, 39353359 - 39353645
Alignment:
| Q |
45 |
aaatgcttgggctgaacttgcaggaaatgagaacccgaggtgttgttgagaataagttggttcttttgaaaggtctcagtggagctttcagaccaggtgt |
144 |
Q |
| |
|
|||| ||||| ||| | ||||||||||||| || |||||| ||| |||| ||||||| |||||||| || ||| | ||||||||||||||||||||||| |
|
|
| T |
39353359 |
aaatacttggactggatttgcaggaaatgaaaaaccgaggcgttcttgaagataagttagttcttttaaagggtgtaagtggagctttcagaccaggtgt |
39353458 |
T |
 |
| Q |
145 |
tctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcaca |
244 |
Q |
| |
|
|||||| |||||||||||| |||| ||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
39353459 |
tctcacggctctgatgggcatcactggtgctggaaaaacaactctaatggatgtgctttctggtagaaaaaccggtggatatattggtgggaacatcaca |
39353558 |
T |
 |
| Q |
245 |
atttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccattctccctatgctact |
331 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||| |
|
|
| T |
39353559 |
atttccggctatccaaaaaagcaagaaacctttgcaagaatttctggatactgtgagcaaactgatatccattctccttatgttact |
39353645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 91 - 321
Target Start/End: Complemental strand, 39589587 - 39589357
Alignment:
| Q |
91 |
tgagaataagttggttcttttgaaaggtctcagtggagctttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctg |
190 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||| ||| || || ||||||||||||||| | ||||||||||||||||| || ||||| ||| || |
|
|
| T |
39589587 |
tgaggataagttggttcttttgaaaggtgtcagtggaatttttaggcctggtgttctcactgctttaatgggcgtcacgggtgctggaaaaactactttg |
39589488 |
T |
 |
| Q |
191 |
atggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctg |
290 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| || |||||||||||||||| |
|
|
| T |
39589487 |
ttggatgtgctttctggtagaaaaactggtggatatattggtgggaccatcacaatttctggatatcctaagaagcaagaaacatttgcaagaatttctg |
39589388 |
T |
 |
| Q |
291 |
ggtactgtgagcaaaatgatatccattctcc |
321 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| |
|
|
| T |
39589387 |
gatactgtgagcaaaatgatatccactctcc |
39589357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 96 - 321
Target Start/End: Complemental strand, 39575344 - 39575119
Alignment:
| Q |
96 |
ataagttggttcttttgaaaggtctcagtggagctttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatgga |
195 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||| || ||||||||||||||||| || ||||| ||||| ||||| |||||||||||| ||||||| |
|
|
| T |
39575344 |
ataagttggttcttttgaacggtgtcagcggagcttttaggccaggtgttctcactgcacttatgggtgtcactggtgctggcaaaacaactttgatgga |
39575245 |
T |
 |
| Q |
196 |
tgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtac |
295 |
Q |
| |
|
||| ||| ||||||| |||| ||| ||||||||| |||||||||||||| |||| || |||| || |||||||| ||||||||||||||||| || ||| |
|
|
| T |
39575244 |
tgtacttgctggtaggaaaagtgggggatatattagtgggaacatcacagtttccgggcatcccaaaaagcaagaaacctttgcaagaatttccggatac |
39575145 |
T |
 |
| Q |
296 |
tgtgagcaaaatgatatccattctcc |
321 |
Q |
| |
|
||||||||||||||||| || ||||| |
|
|
| T |
39575144 |
tgtgagcaaaatgatatacactctcc |
39575119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 110 - 331
Target Start/End: Complemental strand, 39622336 - 39622115
Alignment:
| Q |
110 |
ttgaaaggtctcagtggagctttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggta |
209 |
Q |
| |
|
||||| ||| ||||||| | |||||||| | ||||||||| ||||||||||| || || ||||| ||||||||||||||||||||||| || |||| | |
|
|
| T |
39622336 |
ttgaatggtgtcagtggttcattcagaccggctgttctcacagctctgatgggtgtgactggtgctggcaaaacaactctgatggatgtactagctggaa |
39622237 |
T |
 |
| Q |
210 |
gaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatga |
309 |
Q |
| |
|
||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||| ||| ||| |||||||| |||||| | |
|
|
| T |
39622236 |
gaaaaaccagaggatatattggtgggaccatcacaatttctggctattcaaagaagcaggaaacctttgcaagagtttgtggatactgtgaacaaaatta |
39622137 |
T |
 |
| Q |
310 |
tatccattctccctatgctact |
331 |
Q |
| |
|
|||||||||||| |||| |||| |
|
|
| T |
39622136 |
tatccattctccttatgttact |
39622115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 176 - 321
Target Start/End: Complemental strand, 1085011 - 1084865
Alignment:
| Q |
176 |
ggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaag--aagcaagatac |
273 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||| || |
|
|
| T |
1085011 |
ggcaaaacaactttgatggatgtgctt-ctggtagaaaaactgatggatatattggtgggaacatcataatttctggctatccatagaaaagcaagaaac |
1084913 |
T |
 |
| Q |
274 |
ctttgcaagaatttctgggtactgtgagcaaaatgatatccattctcc |
321 |
Q |
| |
|
||| ||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
1084912 |
atttacaagaatttctggatactgtgagcaaatagatatccattctcc |
1084865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 1085123 - 1085062
Alignment:
| Q |
171 |
gtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtg |
233 |
Q |
| |
|
|||| |||||||||||| |||||||||||||| ||||||||||||||| |||||| ||||||| |
|
|
| T |
1085123 |
gtgctggcaaaacaactttgatggatgtgctt-ctggtagaaaaactgatggatacattggtg |
1085062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 318
Target Start/End: Complemental strand, 44223420 - 44223209
Alignment:
| Q |
107 |
cttttgaaaggtctcagtggagctttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctg |
206 |
Q |
| |
|
|||||||| ||| | ||||| || ||||| || ||||||||||| ||| ||||||| || | || || || |||||||||||||||||||| || ||| |
|
|
| T |
44223420 |
cttttgaagggtgttagtggtgcattcaggcccggtgttctcacagctttgatgggtgtaagtggagctggtaaaacaactctgatggatgttctggctg |
44223321 |
T |
 |
| Q |
207 |
gtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaa |
306 |
Q |
| |
|
|||| ||||| ||||||||||||| ||| |||||| ||||||| || || || |||||||| || ||||| ||||||||||| ||||||||||| || |
|
|
| T |
44223320 |
gtaggaaaacaggtggatatattgatggagacatcaaggtttctgggtaccctaaaaagcaagaaacatttgctagaatttctggctactgtgagcagaa |
44223221 |
T |
 |
| Q |
307 |
tgatatccattc |
318 |
Q |
| |
|
|||||||||||| |
|
|
| T |
44223220 |
tgatatccattc |
44223209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 44234170 - 44234031
Alignment:
| Q |
179 |
aaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttg |
278 |
Q |
| |
|
|||||||||||||||||||| || ||||||| ||||| ||||||||||||| ||| |||||| ||||||| ||||| || |||||||| || |||| |
|
|
| T |
44234170 |
aaaacaactctgatggatgttctggctggtaggaaaacaggtggatatattgatggagacatcaaggtttctgggtatcctaaaaagcaagaaacatttg |
44234071 |
T |
 |
| Q |
279 |
caagaatttctgggtactgtgagcaaaatgatatccattc |
318 |
Q |
| |
|
| ||||| || || ||||||||||| |||||||||||||| |
|
|
| T |
44234070 |
ctagaatctccggttactgtgagcagaatgatatccattc |
44234031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 131 - 318
Target Start/End: Complemental strand, 44211234 - 44211047
Alignment:
| Q |
131 |
ttcagaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattg |
230 |
Q |
| |
|
||||| || ||||||||||| ||| ||||||| || | || || || |||||||||||||||||||| || ||||||| ||||| ||||||||||||| |
|
|
| T |
44211234 |
ttcaggcccggtgttctcacagctttgatgggtgtaagtggagctggtaaaacaactctgatggatgttctggctggtaggaaaacaggtggatatattg |
44211135 |
T |
 |
| Q |
231 |
gtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatccattc |
318 |
Q |
| |
|
||| |||||| ||||||| || || || |||||||| || ||||| ||||| ||||| |||||||| || |||||||| ||||| |
|
|
| T |
44211134 |
atggagacatcaaggtttctgggtaccctaaaaagcaagaaacatttgctagaatatctggctactgtgaacagaatgatattcattc |
44211047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 315
Target Start/End: Original strand, 2877138 - 2877319
Alignment:
| Q |
134 |
agaccaggtgttctcactgctctgatgggcgtcacgggtgcaggcaaaacaactctgatggatgtgctttctggtagaaaaactggtggatatattggtg |
233 |
Q |
| |
|
||||| ||||||||||| ||| ||||||| || | || || || ||||| ||| |||||||||| | ||||||| |||||| |||| ||||||| || |
|
|
| T |
2877138 |
agacctggtgttctcacagctttgatgggtgttagtggagctggtaaaactactttgatggatgtattggctggtaggaaaactagtggttatattgatg |
2877237 |
T |
 |
| Q |
234 |
ggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagcaaaatgatatcca |
315 |
Q |
| |
|
||| ||| | ||||||||| || || || |||||||| || ||||| ||||| ||||| || |||||||| ||||||||||| |
|
|
| T |
2877238 |
ggagcataaaaatttctggttaccctaaaaagcaagaaacatttgctagaatctctggctattgtgagcagaatgatatcca |
2877319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 2886975 - 2887092
Alignment:
| Q |
204 |
ctggtagaaaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaagcaagatacctttgcaagaatttctgggtactgtgagca |
303 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||| ||| | ||||||||| || || || || ||||| || ||||| |||| ||||| || |||||||| |
|
|
| T |
2886975 |
ctggtaggaaaactggtggttatattgacgggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagca |
2887074 |
T |
 |
| Q |
304 |
aaatgatatccattctcc |
321 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
2887075 |
gaatgatatccattctcc |
2887092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 2161008 - 2160956
Alignment:
| Q |
212 |
aaaactggtggatatattggtgggaacatcacaatttctggctatccaaagaa |
264 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||| || |||||||||||||| |
|
|
| T |
2161008 |
aaaactggtggatatattgatggaaacatcacaatatccggctatccaaagaa |
2160956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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