View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17162_high_61 (Length: 228)

Name: NF17162_high_61
Description: NF17162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17162_high_61
NF17162_high_61
[»] chr2 (7 HSPs)
chr2 (23-206)||(6667463-6667652)
chr2 (23-106)||(28922402-28922485)
chr2 (23-91)||(28926075-28926144)
chr2 (21-92)||(38955840-38955912)
chr2 (39-116)||(14456285-14456362)
chr2 (26-90)||(21922337-21922402)
chr2 (21-92)||(38996520-38996592)
[»] chr3 (7 HSPs)
chr3 (23-125)||(15291461-15291563)
chr3 (54-125)||(48909802-48909873)
chr3 (23-93)||(15996379-15996449)
chr3 (23-92)||(52041384-52041454)
chr3 (23-92)||(1529165-1529236)
chr3 (23-92)||(39484808-39484879)
chr3 (23-92)||(1141744-1141814)
[»] chr5 (1 HSPs)
chr5 (24-126)||(22780026-22780128)
[»] chr7 (3 HSPs)
chr7 (22-125)||(48850725-48850828)
chr7 (22-116)||(39742270-39742365)
chr7 (24-92)||(6253382-6253451)
[»] chr4 (6 HSPs)
chr4 (40-94)||(7810064-7810118)
chr4 (23-109)||(6898735-6898822)
chr4 (19-92)||(24257699-24257773)
chr4 (26-92)||(9451245-9451312)
chr4 (20-91)||(12094856-12094928)
chr4 (21-69)||(27067872-27067920)
[»] chr6 (3 HSPs)
chr6 (23-90)||(26840415-26840482)
chr6 (23-90)||(26839989-26840056)
chr6 (23-91)||(31665629-31665699)
[»] chr8 (3 HSPs)
chr8 (21-91)||(4966438-4966509)
chr8 (34-91)||(9888950-9889008)
chr8 (23-91)||(42315342-42315412)
[»] chr1 (2 HSPs)
chr1 (23-92)||(22964007-22964077)
chr1 (19-92)||(15700717-15700791)


Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 6667463 - 6667652
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatg--- 119  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  6667463 atctttctttctaaagcttgtttggtcaagctattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatgcta 6667562  T
Q  120 ---ctaatcagcattccactttagctttcccacacaaataactatttccaacatacctctcttcgtgttttccatgcaaatgaatatcca 206  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6667563 atcctaatcagcattccactttagctttcccacacaaataactatttccaacatacctctcttcgtgttttccatgcaaatgaatatcca 6667652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 28922485 - 28922402
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattgcattagcattaa 106  Q
    ||||| ||| ||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||  ||||||||||    
T  28922485 atcttacttactaaagcatgtctggtcaagctattgtttaccctaatcttaacctaatttttccatccattgtgttagcattaa 28922402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 28926075 - 28926144
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaa-tcctaacctaatttttccctcca 91  Q
    ||||||||| ||||||||||| ||||||| |||||  | ||||||| || ||||||||||||||||||||    
T  28926075 atctttcttactaaagcttgtctggtcaagctattagtaaccctaattcttaacctaatttttccctcca 28926144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 38955912 - 38955840
Alignment:
Q  21 taatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||| ||| ||||||||| | || ||||||||||| | |||||||| |||||||||| ||||||||||||    
T  38955912 taatcttacttactaaagcttatctgatcaaactattgataaccctaattctaacctaatattttccctccat 38955840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 14456362 - 14456285
Alignment:
Q  39 cttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaa 116  Q
    ||||||||||||| ||||  ||||||||||| | |  |||||||||||||||||||   ||||||||| || ||||||    
T  14456362 cttgtttggtcaagctatcatttaccctaattcaactctaatttttccctccattgtgatagcattaaatccttctaa 14456285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 21922337 - 21922402
Alignment:
Q  26 tttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctcc 90  Q
    |||||||||||||||||| || |||| ||||   ||||||||||| ||||||||| ||||||||||    
T  21922337 tttctttctaaagcttgtctgatcaagctataacttaccctaatcttaacctaatattttccctcc 21922402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 38996592 - 38996520
Alignment:
Q  21 taatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||||||| ||||||||||| || |||| ||||   ||||||||||  ||||||||| ||||||||||||    
T  38996592 taatctttcttactaaagcttgtctgatcaagctatatgttaccctaattttaacctaatattttccctccat 38996520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 15291461 - 15291563
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatgcta 122  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  15291461 atctttcttactaaagcttgtttggtcaagctattgtttaccctaatcttaacctaatttttccctccattgtattagcattaactccttctaagtgcta 15291560  T
Q  123 atc 125  Q
    |||    
T  15291561 atc 15291563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 48909873 - 48909802
Alignment:
Q  54 tattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatgctaatc 125  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||||  ||||||| |||||||||||||||    
T  48909873 tattgtttaccctaatcttaacctaatttttcccttcattgtattagtgttaactccttctaaatgctaatc 48909802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 15996449 - 15996379
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccatt 93  Q
    ||||||||| ||||||||||| || |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  15996449 atctttcttactaaagcttgtctgatcaagctattgtttaccctaattctaacctaatttttccctgcatt 15996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 52041454 - 52041384
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||| |||||| |||||    
T  52041454 atctttcttactaaagcttgtctggtcaagctattgttcaccctaattttaacctaatattttccttccat 52041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 1529165 - 1529236
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaa-tcctaacctaa-tttttccctccat 92  Q
    ||||||||| ||||||||||||||||||| |||||  | ||||||| || |||||||| |||||||||||||    
T  1529165 atctttcttactaaagcttgtttggtcaagctattagtaaccctaattcttaacctaattttttccctccat 1529236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 39484879 - 39484808
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactat-tgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||||| ||||||||||||||||||| |||| |||| |||||| |  ||||||||| ||||||||||||    
T  39484879 atctttcttactaaagcttgtttggtcaagctatatgttcaccctagttttaacctaatattttccctccat 39484808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 1141744 - 1141814
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||||| ||||||||||||||||||| | |||||| || |||||  ||| ||||| ||||||||||||    
T  1141744 atctttcttactaaagcttgtttggtcaagcaattgttcactctaattttaatctaatattttccctccat 1141814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 22780128 - 22780026
Alignment:
Q  24 tctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatgctaa 123  Q
    |||||||||||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||| ||||||    
T  22780128 tctttctttctaaagcttgtctgatcaagctattgtttaccctaatcttaacctaatttttccctccattgtgttagcattaactccttctaagtgctaa 22780029  T
Q  124 tca 126  Q
    |||    
T  22780028 tca 22780026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 48850725 - 48850828
Alignment:
Q  22 aatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattgcattagcattaactctttctaaatgct 121  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||||||||||||   ||||||||||||| |||||| ||||    
T  48850725 aatctttctttctaaagcttgtctgatcaagctattgtttaccctaatcttaacctaatttttccctccattatgttagcattaactccttctaagtgct 48850824  T
Q  122 aatc 125  Q
    ||||    
T  48850825 aatc 48850828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 39742365 - 39742270
Alignment:
Q  22 aatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccattgcattagcattaactctttctaa 116  Q
    |||||||||| |||||||||||||| |||| |||||| | ||||||||| ||||||||| ||||||||| |||   ||||||||||||| ||||||    
T  39742365 aatctttcttactaaagcttgtttgatcaagctattgataaccctaatcttaacctaatattttccctcgattatgttagcattaactccttctaa 39742270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 6253382 - 6253451
Alignment:
Q  24 tctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacct-aatttttccctccat 92  Q
    |||||||| |||||||||||||  |||| | |||||||| |||||| ||||||| |||||||||||||||    
T  6253382 tctttcttactaaagcttgtttaatcaagcaattgtttaacctaattctaacctaaatttttccctccat 6253451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 7810064 - 7810118
Alignment:
Q  40 ttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctccattg 94  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  7810064 ttgtttggtcaagctattgtttaccctaatcttaacctaatttttccctccattg 7810118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 6898822 - 6898735
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccattgcattagcattaactc 109  Q
    ||||||||| |||||||||||||| |||| |||||| | ||||||||| ||||||||| |||||| |||||||  |||||||||||||    
T  6898822 atctttcttactaaagcttgtttgatcaagctattggtaaccctaatcttaacctaatattttccgtccattgtgttagcattaactc 6898735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 24257699 - 24257773
Alignment:
Q  19 tctaatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||||||||| ||||||||||||||||||| | |||||| ||||||||  ||||||||| |||| |||||||    
T  24257699 tctaatctttcttactaaagcttgtttggtcaagcaattgttcaccctaattttaacctaatatttttcctccat 24257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 9451245 - 9451312
Alignment:
Q  26 tttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    |||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||| ||||||||||||    
T  9451245 tttcttactaaagcttgtctggtcaagctattgttcaccctaattttaacctaatattttccctccat 9451312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 12094928 - 12094856
Alignment:
Q  20 ctaatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctcca 91  Q
    |||||||||||| ||||||||||||||||||| |||||    ||||||||  ||||||||| |||||||||||    
T  12094928 ctaatctttcttactaaagcttgtttggtcaagctattagaaaccctaattttaacctaatattttccctcca 12094856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 27067872 - 27067920
Alignment:
Q  21 taatctttctttctaaagcttgtttggtcaaactattgtttaccctaat 69  Q
    ||||||||||| ||||||||||||||||||||||||  | |||||||||    
T  27067872 taatctttcttactaaagcttgtttggtcaaactatcctataccctaat 27067920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 26840415 - 26840482
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctcc 90  Q
    ||||||||||||||||||||||||||||| | ||  || ||||||||| ||||||| |||||||||||    
T  26840415 atctttctttctaaagcttgtttggtcaagccatcattaaccctaatcttaacctactttttccctcc 26840482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 26839989 - 26840056
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaatttttccctcc 90  Q
    |||||||||||||||| ||||||| |||| | ||  || ||||||||| ||||||| |||||||||||    
T  26839989 atctttctttctaaagtttgtttgatcaagccatcattaaccctaatcttaacctactttttccctcc 26840056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 31665699 - 31665629
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaa-tcctaacctaat-ttttccctcca 91  Q
    ||||||||| ||||||||||||||||||| |||||  | ||||||| || ||||||||| |||||||||||    
T  31665699 atctttcttactaaagcttgtttggtcaagctattagtaaccctaattcttaacctaatattttccctcca 31665629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 4966438 - 4966509
Alignment:
Q  21 taatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcct-aacctaatttttccctcca 91  Q
    ||||||| |||  |||||||||| ||||||| ||||||||||||||||| || |||||||| ||||||||||    
T  4966438 taatcttacttattaaagcttgtctggtcaagctattgtttaccctaattctaaacctaatatttccctcca 4966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 9889008 - 9888950
Alignment:
Q  34 taaagcttgtttggtcaaactattgtttaccctaatcct-aacctaatttttccctcca 91  Q
    |||||||||| ||||||| ||||||||||||||||| || |||||||| ||||||||||    
T  9889008 taaagcttgtctggtcaagctattgtttaccctaattctaaacctaatatttccctcca 9888950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 42315342 - 42315412
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaa-tcctaacctaat-ttttccctcca 91  Q
    ||||||||| ||||||||||||||||||| |||||  | ||||||| || ||||||||| |||||||||||    
T  42315342 atctttcttactaaagcttgtttggtcaagctattagtaaccctaattcttaacctaatattttccctcca 42315412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 22964007 - 22964077
Alignment:
Q  23 atctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||| ||| ||||||||||| ||||||| |||||| | |||||||| |||||||||| ||||||||||||    
T  22964007 atcttacttactaaagcttgtctggtcaagctattggtaaccctaattctaacctaatattttccctccat 22964077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 15700717 - 15700791
Alignment:
Q  19 tctaatctttctttctaaagcttgtttggtcaaactattgtttaccctaatcctaacctaat-ttttccctccat 92  Q
    ||||||||||||| |||||| |||||||||||| |||||  | ||||||||  ||||||| | ||||||||||||    
T  15700717 tctaatctttcttactaaagtttgtttggtcaagctattagtaaccctaattttaacctagtattttccctccat 15700791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University