View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17162_high_7 (Length: 580)

Name: NF17162_high_7
Description: NF17162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17162_high_7
NF17162_high_7
[»] chr6 (26 HSPs)
chr6 (19-493)||(6424892-6425366)
chr6 (85-216)||(6391802-6391937)
chr6 (494-577)||(9352274-9352357)
chr6 (494-576)||(17027382-17027464)
chr6 (494-577)||(7912090-7912173)
chr6 (494-577)||(20850533-20850616)
chr6 (494-566)||(6331219-6331291)
chr6 (494-566)||(23776663-23776735)
chr6 (493-577)||(23986167-23986251)
chr6 (493-575)||(2681070-2681152)
chr6 (493-558)||(13191363-13191428)
chr6 (505-566)||(13492556-13492617)
chr6 (497-577)||(7912522-7912602)
chr6 (494-566)||(13493013-13493085)
chr6 (494-558)||(20896538-20896602)
chr6 (494-577)||(28780322-28780405)
chr6 (504-566)||(28583187-28583249)
chr6 (494-559)||(9440708-9440773)
chr6 (19-87)||(6392158-6392226)
chr6 (83-216)||(6425534-6425671)
chr6 (494-576)||(15929352-15929434)
chr6 (518-577)||(27334305-27334364)
chr6 (518-577)||(27395045-27395104)
chr6 (519-577)||(2891170-2891228)
chr6 (514-575)||(17730980-17731041)
chr6 (494-546)||(20732820-20732872)
[»] chr4 (31 HSPs)
chr4 (494-577)||(24629281-24629364)
chr4 (494-570)||(13265855-13265931)
chr4 (505-577)||(15268029-15268101)
chr4 (494-566)||(35477883-35477955)
chr4 (494-577)||(13266298-13266381)
chr4 (493-560)||(50399333-50399400)
chr4 (507-576)||(4127276-4127345)
chr4 (493-577)||(7678466-7678550)
chr4 (494-576)||(23350128-23350210)
chr4 (494-575)||(50398839-50398920)
chr4 (509-577)||(35871839-35871907)
chr4 (494-554)||(50398383-50398443)
chr4 (494-577)||(49998848-49998931)
chr4 (506-576)||(14571545-14571615)
chr4 (507-576)||(14572012-14572081)
chr4 (494-577)||(23943087-23943170)
chr4 (494-576)||(4127739-4127816)
chr4 (494-576)||(5810047-5810129)
chr4 (507-575)||(23091367-23091436)
chr4 (494-554)||(51331128-51331188)
chr4 (494-577)||(7381479-7381562)
chr4 (494-561)||(21220199-21220266)
chr4 (494-577)||(31816983-31817066)
chr4 (519-577)||(44471195-44471253)
chr4 (494-535)||(10668385-10668426)
chr4 (494-535)||(10668891-10668932)
chr4 (494-535)||(10882530-10882571)
chr4 (499-551)||(8861929-8861981)
chr4 (499-551)||(8864802-8864854)
chr4 (494-558)||(21067513-21067577)
chr4 (509-577)||(27578317-27578385)
[»] chr1 (28 HSPs)
chr1 (493-577)||(38341118-38341202)
chr1 (494-577)||(20053931-20054014)
chr1 (494-577)||(20054387-20054470)
chr1 (494-577)||(20054843-20054926)
chr1 (494-577)||(20055299-20055382)
chr1 (494-577)||(20055755-20055838)
chr1 (494-577)||(20056211-20056294)
chr1 (494-577)||(20056667-20056750)
chr1 (494-577)||(20057114-20057197)
chr1 (494-577)||(20057570-20057653)
chr1 (494-566)||(16451784-16451856)
chr1 (494-566)||(16460937-16461009)
chr1 (494-577)||(20845512-20845595)
chr1 (494-577)||(50002926-50003009)
chr1 (494-576)||(49996531-49996613)
chr1 (494-566)||(35759915-35759987)
chr1 (494-577)||(52250418-52250501)
chr1 (493-577)||(20060190-20060274)
chr1 (494-566)||(52250766-52250838)
chr1 (494-566)||(52251103-52251175)
chr1 (494-577)||(31822970-31823053)
chr1 (494-577)||(35759459-35759542)
chr1 (494-577)||(46693586-46693669)
chr1 (494-577)||(50002558-50002641)
chr1 (507-559)||(51372738-51372790)
chr1 (494-575)||(7229794-7229875)
chr1 (507-571)||(28181357-28181421)
chr1 (494-578)||(39582552-39582636)
[»] chr7 (27 HSPs)
chr7 (494-577)||(9125171-9125254)
chr7 (493-577)||(28495469-28495553)
chr7 (494-576)||(2193469-2193551)
chr7 (494-577)||(2941608-2941691)
chr7 (494-577)||(7646329-7646412)
chr7 (494-577)||(36422463-36422546)
chr7 (508-577)||(43233169-43233238)
chr7 (494-577)||(28496066-28496149)
chr7 (504-566)||(13122365-13122427)
chr7 (504-566)||(13124996-13125058)
chr7 (495-576)||(2189357-2189438)
chr7 (494-577)||(18833498-18833581)
chr7 (494-553)||(43776321-43776380)
chr7 (512-577)||(42515756-42515821)
chr7 (512-576)||(26419104-26419168)
chr7 (494-566)||(42515315-42515387)
chr7 (494-577)||(6747457-6747540)
chr7 (494-566)||(29038871-29038943)
chr7 (494-577)||(6718926-6719009)
chr7 (494-577)||(6747927-6748010)
chr7 (494-577)||(7646627-7646710)
chr7 (513-575)||(11372657-11372719)
chr7 (493-577)||(34405441-34405525)
chr7 (496-576)||(31406440-31406522)
chr7 (494-577)||(36422594-36422677)
chr7 (493-575)||(2466138-2466219)
chr7 (494-535)||(18833637-18833678)
[»] chr5 (25 HSPs)
chr5 (494-577)||(8641886-8641969)
chr5 (494-577)||(3886452-3886535)
chr5 (494-577)||(3886908-3886991)
chr5 (494-577)||(34371824-34371907)
chr5 (494-577)||(2474617-2474700)
chr5 (494-577)||(34372280-34372363)
chr5 (495-577)||(2474161-2474243)
chr5 (493-577)||(189280-189364)
chr5 (494-577)||(2194016-2194099)
chr5 (494-557)||(15512863-15512926)
chr5 (494-577)||(42788497-42788580)
chr5 (496-566)||(21883938-21884008)
chr5 (494-566)||(30684862-30684934)
chr5 (491-577)||(17445303-17445389)
chr5 (494-566)||(34868001-34868073)
chr5 (494-566)||(30720111-30720183)
chr5 (494-575)||(11160605-11160686)
chr5 (494-577)||(22557181-22557265)
chr5 (494-566)||(29679959-29680030)
chr5 (494-577)||(24182097-24182180)
chr5 (494-577)||(30719656-30719739)
chr5 (493-575)||(20858392-20858474)
chr5 (502-555)||(11757140-11757193)
chr5 (494-557)||(2058508-2058572)
chr5 (494-577)||(22556748-22556832)
[»] chr2 (19 HSPs)
chr2 (494-577)||(32377758-32377841)
chr2 (493-577)||(33175168-33175252)
chr2 (496-577)||(30966446-30966527)
chr2 (494-577)||(25337848-25337931)
chr2 (494-577)||(30966902-30966985)
chr2 (494-577)||(5399668-5399751)
chr2 (504-577)||(32377577-32377650)
chr2 (493-577)||(24818537-24818621)
chr2 (494-565)||(29804871-29804942)
chr2 (494-577)||(33771213-33771296)
chr2 (511-577)||(11389695-11389761)
chr2 (511-577)||(11406356-11406422)
chr2 (519-577)||(20502176-20502234)
chr2 (494-577)||(1912736-1912819)
chr2 (494-577)||(15639946-15640029)
chr2 (494-557)||(30963114-30963177)
chr2 (519-577)||(16379149-16379207)
chr2 (493-566)||(25433906-25433979)
chr2 (509-577)||(26865119-26865187)
[»] scaffold0322 (1 HSPs)
scaffold0322 (494-576)||(19179-19261)
[»] chr3 (24 HSPs)
chr3 (494-575)||(14820368-14820449)
chr3 (494-559)||(16811609-16811674)
chr3 (494-577)||(50347958-50348041)
chr3 (493-577)||(8067492-8067576)
chr3 (496-576)||(11179887-11179967)
chr3 (494-566)||(14814172-14814244)
chr3 (494-577)||(13150405-13150488)
chr3 (494-577)||(28561957-28562040)
chr3 (494-577)||(39653376-39653459)
chr3 (497-575)||(13149953-13150031)
chr3 (504-577)||(32386595-32386668)
chr3 (494-566)||(31284127-31284199)
chr3 (494-577)||(16811137-16811220)
chr3 (494-557)||(32227072-32227135)
chr3 (494-577)||(41473753-41473836)
chr3 (504-566)||(27187190-27187252)
chr3 (493-557)||(32227732-32227796)
chr3 (493-577)||(37045244-37045328)
chr3 (494-577)||(18318867-18318950)
chr3 (514-577)||(53150683-53150746)
chr3 (520-573)||(26436264-26436316)
chr3 (494-576)||(25238978-25239060)
chr3 (494-555)||(25248346-25248407)
chr3 (494-566)||(20884968-20885040)
[»] scaffold0389 (1 HSPs)
scaffold0389 (494-577)||(13384-13467)
[»] scaffold0024 (1 HSPs)
scaffold0024 (494-577)||(105932-106015)
[»] scaffold0020 (1 HSPs)
scaffold0020 (494-577)||(107314-107397)
[»] chr8 (25 HSPs)
chr8 (494-577)||(22548400-22548483)
chr8 (494-577)||(32292153-32292236)
chr8 (494-576)||(34308330-34308412)
chr8 (494-576)||(34308786-34308868)
chr8 (494-558)||(22026611-22026675)
chr8 (494-577)||(22548846-22548929)
chr8 (494-577)||(21315961-21316044)
chr8 (494-577)||(27022190-27022273)
chr8 (494-555)||(12827105-12827166)
chr8 (505-577)||(25147748-25147819)
chr8 (494-566)||(25148189-25148261)
chr8 (494-577)||(17103294-17103377)
chr8 (510-577)||(41658972-41659039)
chr8 (494-576)||(9251098-9251180)
chr8 (494-577)||(10844466-10844549)
chr8 (494-577)||(27926110-27926193)
chr8 (511-577)||(12100902-12100968)
chr8 (494-557)||(27021840-27021903)
chr8 (499-577)||(28453550-28453628)
chr8 (511-559)||(25307994-25308042)
chr8 (494-557)||(31283503-31283566)
chr8 (494-533)||(32292660-32292699)
chr8 (511-577)||(29117448-29117514)
chr8 (496-577)||(6466468-6466549)
chr8 (519-575)||(41913184-41913240)
[»] scaffold0022 (5 HSPs)
scaffold0022 (494-578)||(162985-163069)
scaffold0022 (497-577)||(162531-162612)
scaffold0022 (494-577)||(163283-163366)
scaffold0022 (494-555)||(69666-69727)
scaffold0022 (494-545)||(162483-162534)
[»] scaffold0277 (1 HSPs)
scaffold0277 (494-577)||(14553-14636)
[»] scaffold0243 (1 HSPs)
scaffold0243 (494-577)||(1432-1515)
[»] scaffold0168 (1 HSPs)
scaffold0168 (494-577)||(2954-3037)
[»] scaffold0002 (2 HSPs)
scaffold0002 (494-577)||(154514-154597)
scaffold0002 (497-575)||(154971-155049)
[»] scaffold1519 (1 HSPs)
scaffold1519 (494-576)||(1552-1634)
[»] scaffold0217 (1 HSPs)
scaffold0217 (494-576)||(523-605)
[»] scaffold0018 (1 HSPs)
scaffold0018 (493-577)||(10511-10595)
[»] scaffold0557 (1 HSPs)
scaffold0557 (494-577)||(2308-2391)
[»] scaffold0065 (2 HSPs)
scaffold0065 (503-566)||(62967-63030)
scaffold0065 (494-555)||(67214-67275)
[»] scaffold0005 (2 HSPs)
scaffold0005 (506-576)||(245761-245831)
scaffold0005 (507-576)||(245295-245364)
[»] scaffold0499 (1 HSPs)
scaffold0499 (494-577)||(1902-1985)
[»] scaffold0442 (1 HSPs)
scaffold0442 (496-559)||(5-68)
[»] scaffold0333 (2 HSPs)
scaffold0333 (494-577)||(5232-5315)
scaffold0333 (494-577)||(4772-4855)
[»] scaffold0040 (1 HSPs)
scaffold0040 (494-557)||(2061-2124)
[»] scaffold0047 (1 HSPs)
scaffold0047 (519-577)||(17474-17532)


Alignment Details
Target: chr6 (Bit Score: 431; Significance: 0; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 19 - 493
Target Start/End: Complemental strand, 6425366 - 6424892
Alignment:
Q  19 aatcttgcacttcaaatgtcaatttacaagttgtgttccaactcatcaggaaaataccatttctcaatgcatgttacaccttttatagatatttcccatc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6425366 aatcttgcacttcaaatgtcaatttacaagttgtgttccaactcatcaggaaaataccatttctcaatgcatgttacaccttttatagatatttcccatc 6425267  T
Q  119 aatgcaaagacgttaccttcaaagggagcgtacctttatcaactaggacttctaaagcctcgtcaagcctttcccggctcattagtatgttggcctttct 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  6425266 aatgcaaagacgttaccttcaaagggagcgtacctttatcaactaggacttctaaagcctcgtcaagcctttcctggctcattagtatgccggcctttct 6425167  T
Q  219 tatttgctaaaataagttctccatcacgtcgaacctatcctcacttatcatagaaatcatagtaaagcatagtttcgaaatcatgaatagaaaaacacaa 318  Q
    ||| | |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6425166 tatcttctaaaataggttctccatcacgacaaacctatcctcacttatcatagaaatcatagtaaagcatagtttcaaaatcatgaatagaaaaacacaa 6425067  T
Q  319 gtgaacgacaactgtaaggttagcctcaaaatggagcaaacaaagatacaggtatgtttcttaccaaaaaagatggataaccacacacacataaagtact 418  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6425066 gtgaacgacaactgtaaggttagcctcaaaagggagcaaacaaagatacaggtatgtttcttaccaaaaaagatgtataaccacacacacataaagtact 6424967  T
Q  419 gttgattatatatccattcctttccaaactataaggttcaaagtagtatggcaagtacttagcatatgcacctcc 493  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6424966 gttgattatatatccattcctttccaaactataaggttcaaagtagtatggcaagtacttagcatatgcacctcc 6424892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 6391937 - 6391802
Alignment:
Q  85 atgcatgttacaccttttatagatatttcccatcaatgcaaagacgttaccttcaaagggagcgtac-cttta---tcaactaggacttctaaagcctcg 180  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||  ||| ||| |||||||||||| |||||   ||  ||||||||||||||||||||    
T  6391937 atgcatgttacgccttttatagatattgcccatcaaagcaaagacactactttcgaagggagcgtactctttaagctcgtctaggacttctaaagcctcg 6391838  T
Q  181 tcaagcctttcccggctcattagtatgttggccttt 216  Q
    |||| ||||||| |||||||||| ||||||||||||    
T  6391837 tcaaacctttccaggctcattagaatgttggccttt 6391802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 9352357 - 9352274
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||| || |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  9352357 tgtaacgtcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcg 9352274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 17027382 - 17027464
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  17027382 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 17027464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 7912173 - 7912090
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||| ||||| |||||||||||| |||||| | ||||||||    
T  7912173 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcg 7912090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 20850616 - 20850533
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| | || ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20850616 tgtaacaccccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20850533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 6331219 - 6331291
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| ||||||||||||| |||||||||||||||| | |||| ||||||||||||| |||||||||||    
T  6331219 tgtaacatctcagactgctttcaagattgccgactgaccctacaaaccaacacgagtctttccagcatgtttt 6331291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 23776735 - 23776663
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||| ||||||    
T  23776735 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgaatcttttcagcgtgtttt 23776663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 23986167 - 23986251
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| || ||||||||||| ||||||||||||||||| |||| ||||| |||||||||||| ||| |||| ||||||||    
T  23986167 ctgtaacatcccatactgctttcagaattgccgactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcg 23986251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 493 - 575
Target Start/End: Original strand, 2681070 - 2681152
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||| ||| | |||||| | ||||||    
T  2681070 ctgtaacatcccagacagctttcaggattgccgactgaccccacaaaccaacacgagtcttctcaacgtgttttgtcctcact 2681152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 493 - 558
Target Start/End: Original strand, 13191363 - 13191428
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcag 558  Q
    |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  13191363 ctgtaacaccccagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcag 13191428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 505 - 566
Target Start/End: Complemental strand, 13492617 - 13492556
Alignment:
Q  505 agactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  13492617 agactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 13492556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 497 - 577
Target Start/End: Complemental strand, 7912602 - 7912522
Alignment:
Q  497 aacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||| |||| |||||||||||||||||||| |||||| |||| |||| ||||||||||||| |||||| | ||||||||    
T  7912602 aacatcccagattgctttcaggattgccgactaaccccacaaaccaacatgagtcttttcagcgtgttttgtcctcactcg 7912522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 13493085 - 13493013
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||| | |||||||||||||||||||| ||||||||| | |||  |||||||||||||||||||||||||    
T  13493085 tgtaacaccccagactgctttcaggattgctgactgaccctacaaatcaacacgagtcttttcagcatgtttt 13493013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 558
Target Start/End: Original strand, 20896538 - 20896602
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcag 558  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||    
T  20896538 tgtaacatcccagactgctttcaagattgccggctgaccccacaaaccaacacgagtcttttcag 20896602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 28780405 - 28780322
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| || ||||||||| |||| ||||||||||||||||  ||||||| | ||||||||    
T  28780405 tgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcaaaatgttttatcctcactcg 28780322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 566
Target Start/End: Complemental strand, 28583249 - 28583187
Alignment:
Q  504 cagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||||||  |||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  28583249 cagactgctttcgagattgccgactgaccccacaaactaacatgagtcttttcagtatgtttt 28583187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 494 - 559
Target Start/End: Original strand, 9440708 - 9440773
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagc 559  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||| | ||||||| ||||||||    
T  9440708 tgtaacatcccagactgctttcaagattgccgactgaccccacaaaccagcacgagttttttcagc 9440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 6392226 - 6392158
Alignment:
Q  19 aatcttgcacttcaaatgtcaatttacaagttgtgttccaactcatcaggaaaataccatttctcaatg 87  Q
    |||||||||||||||||||| |  |||||||||| ||||| ||||||||| |||||| |||||||||||    
T  6392226 aatcttgcacttcaaatgtcgagctacaagttgtcttccagctcatcaggcaaatacaatttctcaatg 6392158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 6425671 - 6425534
Alignment:
Q  83 caatgcatgttacaccttttatagatatttcccatcaatgcaaagacgttaccttcaaagggagcgtac-cttta---tcaactaggacttctaaagcct 178  Q
    |||| |||||||| ||||||||||||| ||||| |||| ||||| ||  ||| ||| |||||||||||| |||||   ||   |||||||||||||||||    
T  6425671 caatacatgttacgccttttatagataattcccgtcaaagcaaatacactactttcgaagggagcgtactctttaagctcgtataggacttctaaagcct 6425572  T
Q  179 cgtcaagcctttcccggctcattagtatgttggccttt 216  Q
    |  ||| ||||||| ||||||||| ||||||| |||||    
T  6425571 ctccaaacctttccaggctcattaatatgttgtccttt 6425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 15929434 - 15929352
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| ||||||||||| ||||||||||| |||||||| |||  ||||| |||||||| ||| | |||| | |||||||    
T  15929434 tgtaacatcccagactgctttaaggattgccgagtgaccccacaaatcaacacaagtctttttagcgtattttgtcctcactc 15929352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 577
Target Start/End: Complemental strand, 27334364 - 27334305
Alignment:
Q  518 gattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||| |||||||||||| |||  |||||||||||||||||| |||||| | ||||||||    
T  27334364 gattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 577
Target Start/End: Complemental strand, 27395104 - 27395045
Alignment:
Q  518 gattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||| |||||||||||| |||  |||||||||||||||||| |||||| | ||||||||    
T  27395104 gattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 2891170 - 2891228
Alignment:
Q  519 attgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||||||| | |||| ||||||| |||||||||| |||||| | ||||||||    
T  2891170 attgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtcctcactcg 2891228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 17730980 - 17731041
Alignment:
Q  514 tcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    ||||||||| |||||||||| | |||| |||||||||||||| ||| |||||| | ||||||    
T  17730980 tcaggattgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcact 17731041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 546
Target Start/End: Complemental strand, 20732872 - 20732820
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacac 546  Q
    |||||||||||| | ||||||||||||||| || |||||||| |||| |||||    
T  20732872 tgtaacatcacataatgctttcaggattgctgaatgaccccacaaaccaacac 20732820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 24629281 - 24629364
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||    
T  24629281 tgtaacatcacagactgctttcaggattgccgactgaccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcg 24629364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 13265931 - 13265855
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttc 570  Q
    ||||||||| |||||||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||    
T  13265931 tgtaacatctcagactgctttcaggattaccgactgaccgcacaaactaacacgagtcttttcagcgtgttttcttc 13265855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 15268029 - 15268101
Alignment:
Q  505 agactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  15268029 agactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 15268101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 35477955 - 35477883
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  35477955 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 35477883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 13266381 - 13266298
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || |||||||||||||||| |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||    
T  13266381 tgtaacatcccatactgctttcaggattgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcg 13266298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 493 - 560
Target Start/End: Complemental strand, 50399400 - 50399333
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagca 560  Q
    |||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  50399400 ctgtaacatcgcagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttcagca 50399333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 507 - 576
Target Start/End: Original strand, 4127276 - 4127345
Alignment:
Q  507 actgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  4127276 actgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 4127345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 7678466 - 7678550
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| |||||||||||||| |||| |||||||||||| ||||  ||||||||||||||||| |||||| | ||||||||    
T  7678466 ctgtaacatcccagactgctttcagcattgtcgactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcg 7678550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 23350128 - 23350210
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||| | |||||||||||||| ||||||||||||||||| |||| |||||||||||||||||  |||||| | |||||||    
T  23350128 tgtaacaccccagactgctttcagaattgccgactgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactc 23350210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 50398839 - 50398920
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||| || | |||||| | ||||||    
T  50398839 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtctttccaacgtgttttgtcctcact 50398920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 509 - 577
Target Start/End: Complemental strand, 35871907 - 35871839
Alignment:
Q  509 tgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| | ||||||||    
T  35871907 tgctttcaggattgccgactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 35871839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 50398383 - 50398443
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttt 554  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  50398383 tgtaacatctcagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttt 50398443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 49998931 - 49998848
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| | || ||||||||||| ||||||||||| ||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  49998931 tgtaacaccccaaactgctttcagaattgccgactgtccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 49998848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 576
Target Start/End: Original strand, 14571545 - 14571615
Alignment:
Q  506 gactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||||| | |||||||    
T  14571545 gactgctttcaggattcccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactc 14571615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 507 - 576
Target Start/End: Original strand, 14572012 - 14572081
Alignment:
Q  507 actgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||| | |||||| | |||||||    
T  14572012 actgctttcaggattgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactc 14572081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 23943087 - 23943170
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| || |||| |||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  23943087 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 23943170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 4127739 - 4127816
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| ||||||||||||| |||||||||     |||| |||| |||||||||||||||||| |||||| | |||||||    
T  4127739 tgtaacatcccagactgctttcaagattgccga-----cccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 4127816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 5810129 - 5810047
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| || ||| |||| ||||||||||||| |||||| |||  |||| ||||||||||||| |||||| | |||||||    
T  5810129 tgtaacatctcatacttcttttaggattgccgactaaccccacaaatcaacatgagtcttttcagcgtgttttatcctcactc 5810047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 507 - 575
Target Start/End: Original strand, 23091367 - 23091436
Alignment:
Q  507 actgctttcaggattgccgactga-ccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||| |||| ||| |||||| | ||||||    
T  23091367 actgctttcagggttgccgactgacccccataaactaacactagtttttttagcgtgttttatcctcact 23091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 51331128 - 51331188
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttt 554  Q
    |||||||||  ||||| |||| |||||||||||||||||| | ||||||| ||||||||||    
T  51331128 tgtaacatcctagactacttttaggattgccgactgaccctacaaactaatacgagtcttt 51331188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 7381562 - 7381479
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || ||  |||| || ||||||||||||||| | |||| |||||| ||||||||||| |||||| | ||||||||    
T  7381562 tgtaacatcccatacgactttaagcattgccgactgaccctacaaaccaacacgggtcttttcagcgtgttttgtcctcactcg 7381479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 561
Target Start/End: Original strand, 21220199 - 21220266
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcat 561  Q
    ||||||| | || |||||||||| |||||||||||||||||| |||  | ||| ||||||||||||||    
T  21220199 tgtaacacctcaaactgctttcaagattgccgactgaccccagaaatcagcacaagtcttttcagcat 21220266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 31816983 - 31817066
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || ||| || ||||||||| ||| || ||||| |||| | |||||||||||||| |||||||| | ||||||||    
T  31816983 tgtaacatcccatactactatcaggattgtcgattggccccacaaaccagcacgagtcttttcaacatgttttgtcctcactcg 31817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 44471195 - 44471253
Alignment:
Q  519 attgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||| |||||||||| | |||| ||||||||||||| ||||||||||| | ||||||||    
T  44471195 attgtcgactgaccctacaaaccaacacgagtctttccagcatgttttgtcctcactcg 44471253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 10668426 - 10668385
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgacccca 535  Q
    ||||||| | ||||||||||||||||||||| ||||||||||    
T  10668426 tgtaacaccccagactgctttcaggattgcccactgacccca 10668385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 10668932 - 10668891
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgacccca 535  Q
    ||||||| | ||||||||||||||||||||| ||||||||||    
T  10668932 tgtaacaccccagactgctttcaggattgccaactgacccca 10668891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 10882571 - 10882530
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgacccca 535  Q
    ||||||| | ||||||||||||||||||||| ||||||||||    
T  10882571 tgtaacaccccagactgctttcaggattgcccactgacccca 10882530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 551
Target Start/End: Original strand, 8861929 - 8861981
Alignment:
Q  499 catcacagactgctttcaggattgccgactgaccccataaactaacacgagtc 551  Q
    |||| |||||||||||||  ||||||||||||||||| |||| |||| |||||    
T  8861929 catcccagactgctttcataattgccgactgaccccacaaacaaacatgagtc 8861981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 551
Target Start/End: Original strand, 8864802 - 8864854
Alignment:
Q  499 catcacagactgctttcaggattgccgactgaccccataaactaacacgagtc 551  Q
    |||| |||||||||||||  ||||||||||||||||| |||| |||| |||||    
T  8864802 catcccagactgctttcataattgccgactgaccccacaaacaaacatgagtc 8864854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 21067577 - 21067513
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcag 558  Q
    ||||||||| |||||  |||| || ||||  ||||||||| | ||||||||||||||||||||||    
T  21067577 tgtaacatcccagacgactttaagcattgtggactgacccaacaaactaacacgagtcttttcag 21067513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 577
Target Start/End: Original strand, 27578317 - 27578385
Alignment:
Q  509 tgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||||||  |||||| |||| |||| | ||||||||||||| || |||||| | ||||||||    
T  27578317 tgctttcaggattgttgactgatcccacaaaccatcacgagtcttttctgcgtgttttgtcctcactcg 27578385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 7e-26; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 38341202 - 38341118
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| | ||||||||    
T  38341202 ctgtaacatcccagactgctttcaggattgccgactgaccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcg 38341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20053931 - 20054014
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  20053931 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcg 20054014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20054387 - 20054470
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20054387 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20054470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20054843 - 20054926
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20054843 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20054926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20055299 - 20055382
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20055299 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20055382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20055755 - 20055838
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20055755 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20055838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20056211 - 20056294
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20056211 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20056294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20056667 - 20056750
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20056667 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20056750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20057114 - 20057197
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20057114 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20057197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20057570 - 20057653
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20057570 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20057653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 16451784 - 16451856
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  16451784 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 16451856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 16460937 - 16461009
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  16460937 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 16461009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 20845512 - 20845595
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  20845512 tgtaacatctcagactgctttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 20845595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 50002926 - 50003009
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  50002926 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 50003009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 49996531 - 49996613
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||    
T  49996531 tgtaacatctcagactgcttttaggattgccgactgaccccacaaactaacaagagtcttttcagcgtgttttgtcctcactc 49996613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 35759915 - 35759987
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  35759915 tgtaacatcccagactgctttcatgattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 35759987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 52250501 - 52250418
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  52250501 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 52250418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 20060190 - 20060274
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||| || | |||||| | ||||||||    
T  20060190 ctgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcg 20060274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 52250838 - 52250766
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| ||||||    
T  52250838 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 52250766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 52251175 - 52251103
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| ||||||    
T  52251175 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 52251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 31822970 - 31823053
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||| ||||||| ||||||| ||||||||||| |||  ||||||||||||||||||||||||| | ||||||||    
T  31822970 tgtaacatcccagaatgctttctggattgctgactgaccccacaaatcaacacgagtcttttcagcatgttttgtcctcactcg 31823053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 35759459 - 35759542
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| | |||||| |||||| |||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  35759459 tgtaacaccccagactactttcatgattgccgactgaccccaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 35759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 46693586 - 46693669
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || |||||||||||||||| |||||||||||| |||| |||||| ||||||||||| |||||| | ||||||||    
T  46693586 tgtaacatcccaaactgctttcaggattgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcg 46693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 50002558 - 50002641
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||  ||||  |||||||||||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  50002558 tgtaacatcctagacgactttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 50002641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 559
Target Start/End: Original strand, 51372738 - 51372790
Alignment:
Q  507 actgctttcaggattgccgactgaccccataaactaacacgagtcttttcagc 559  Q
    |||||||||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  51372738 actgctttcaagattgccgattgaccccacaaaccaacacgagtcttttcagc 51372790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 7229794 - 7229875
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||||||  |||||| ||||  ||||| ||||| |||||| |||  ||||||||| ||||||||||||||| | ||||||    
T  7229794 tgtaacatcctagactgttttcttgattgacgactcaccccacaaagcaacacgagttttttcagcatgttttatcctcact 7229875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 28181357 - 28181421
Alignment:
Q  507 actgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttct 571  Q
    |||||||||||||||| | |||| | ||| |||| |||||||||||||||||  |||||| ||||    
T  28181357 actgctttcaggattgtcaactgcctccacaaaccaacacgagtcttttcagagtgttttgttct 28181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 578
Target Start/End: Complemental strand, 39582636 - 39582552
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcga 578  Q
    ||||||||| || ||| |||| || |||||||||||| || | |||| || ||||||||| ||||| |||||| | |||||||||    
T  39582636 tgtaacatcccaaactactttaagcattgccgactgatcctacaaaccaaaacgagtcttctcagcgtgttttgtcctcactcga 39582552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 9125254 - 9125171
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  9125254 tgtaacaccccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcg 9125171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 28495469 - 28495553
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||| | ||||||||    
T  28495469 ctgtaacatcgcagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcg 28495553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 2193551 - 2193469
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||| | |||||||    
T  2193551 tgtaacatctcagactgctttcaggattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 2193469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 2941608 - 2941691
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||||  ||||||||||||||| || |||| |||||||||||||||||| |||||||| ||||||||    
T  2941608 tgtaacatcccagactgctttcgtgattgccgactgaccgcacaaaccaacacgagtcttttcagcgtgttttctcctcactcg 2941691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 7646329 - 7646412
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  7646329 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 7646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 36422546 - 36422463
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  36422546 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 36422463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 508 - 577
Target Start/End: Complemental strand, 43233238 - 43233169
Alignment:
Q  508 ctgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  43233238 ctgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 43233169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 28496149 - 28496066
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||  || |||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  28496149 tgtaacattccaaactgttttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 28496066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 504 - 566
Target Start/End: Original strand, 13122365 - 13122427
Alignment:
Q  504 cagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  13122365 cagactgctttcaggattgccgattgaccccacaaaccaacacgagtcttttcagcgtgtttt 13122427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 504 - 566
Target Start/End: Original strand, 13124996 - 13125058
Alignment:
Q  504 cagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||||    
T  13124996 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcctttcagcgtgtttt 13125058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 495 - 576
Target Start/End: Complemental strand, 2189438 - 2189357
Alignment:
Q  495 gtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||  |||||||||||| ||||| |||||| | |||||||    
T  2189438 gtaacatcccagactgctttcaggattgccgactgtccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactc 2189357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 18833581 - 18833498
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| | ||||||||||||||||||||||||| | |||| |||  |||||||||||||||||| |||||| | ||||||||    
T  18833581 tgtaacaccccagactgctttcaggattgccgacttatcccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 18833498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 553
Target Start/End: Complemental strand, 43776380 - 43776321
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctt 553  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  43776380 tgtaacatcccagactgctttcaggattgccgactaaccccacaaaccaacacgagtctt 43776321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 42515821 - 42515756
Alignment:
Q  512 tttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  42515821 tttcaagattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 42515756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 576
Target Start/End: Original strand, 26419104 - 26419168
Alignment:
Q  512 tttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| |||||||| | |||||||    
T  26419104 tttcaggattgtcgactgaccccacaaaccaacacgagtcttttcaacatgttttgtcctcactc 26419168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 42515387 - 42515315
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    |||||||||||||||  |||| || ||||||||||||||| | |||| |||||||||||||||||| ||||||    
T  42515387 tgtaacatcacagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 42515315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 6747457 - 6747540
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||| || ||||||||||||||| | |||| ||||| |||||||||| | |||||| | ||||||||    
T  6747457 tgtaacatcccagactgctttaagcattgccgactgaccctacaaaccaacacaagtcttttcaacttgttttgtcctcactcg 6747540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 29038871 - 29038943
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||  |||| || ||||||||||||||| | |||| |||||||||||||||||| ||||||    
T  29038871 tgtaacatcccagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 29038943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 6718926 - 6719009
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| |||||||| ||||||||||| |||| ||||||| |||||||||  |||||| | ||||||||    
T  6718926 tgtaacatcccagacgacttttaggattgctgactgaccccacaaaccaacacgattcttttcagtgtgttttgtcctcactcg 6719009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 6747927 - 6748010
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||| || |||||  |||| || ||||||||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  6747927 tgtaacctctcagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 6748010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 7646710 - 7646627
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| ||||||| ||||| |||||| |||| |||||||||||||||||  |||||| | ||||||||    
T  7646710 tgtaacatcccagacgacttttaggattgtcgactaaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcg 7646627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 575
Target Start/End: Complemental strand, 11372719 - 11372657
Alignment:
Q  513 ttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    ||||||||||| || |||||| | |||| ||||||||||||||||||||||||| | ||||||    
T  11372719 ttcaggattgctgagtgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcact 11372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 577
Target Start/End: Original strand, 34405441 - 34405525
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||  ||||  |||| ||||||| |||||||||||| |||  |||||| ||||||||||| |||||| | ||||||||    
T  34405441 ctgtaacatcctagacaacttttaggattgtcgactgaccccacaaatcaacacgggtcttttcagcgtgttttgtcctcactcg 34405525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 496 - 576
Target Start/End: Original strand, 31406440 - 31406522
Alignment:
Q  496 taacatcacagactgctttcaggattgccgactg--accccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||| ||| |||||||||||||| |||||||  |||| | |||| |||||  |||||||||||||||||| | |||||||    
T  31406440 taacatctcagtctgctttcaggattaccgactgacaccctacaaaccaacacatgtcttttcagcatgttttgtcctcactc 31406522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 36422677 - 36422594
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||| | |||| || |||| |||||||||||| |||  |||||||||||||||||  |||||| | ||||||||    
T  36422677 tgtaacatcccagattacttttagcattgtcgactgaccccacaaatcaacacgagtcttttcagtgtgttttgtcctcactcg 36422594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 575
Target Start/End: Complemental strand, 2466219 - 2466138
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||||||| |||||  |||| || |||| |||||||||  | ||||||||||||||||||||||| |||||| | ||||||    
T  2466219 ctgtaacatcccagacgactttaagcattgtcgactgacct-acaaactaacacgagtcttttcagcgtgttttgtcctcact 2466138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 18833678 - 18833637
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgacccca 535  Q
    ||||||| | ||||||||||||||||||||||||||| ||||    
T  18833678 tgtaacaccccagactgctttcaggattgccgactgatccca 18833637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 8641886 - 8641969
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  8641886 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 8641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 3886452 - 3886535
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  3886452 tgtaacatcccagaatgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 3886535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 3886908 - 3886991
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||| | ||||||||    
T  3886908 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcg 3886991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 34371907 - 34371824
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |||||| | ||||||||    
T  34371907 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcg 34371824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 2474700 - 2474617
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||| || ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  2474700 tgtaacgtcccagactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcg 2474617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 34372363 - 34372280
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||| | ||||||||    
T  34372363 tgtaacattccagactgctttcaggattgccgactgacgccataaaccaacacgagtattttcagcgtgttttttcctcactcg 34372280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 495 - 577
Target Start/End: Complemental strand, 2474243 - 2474161
Alignment:
Q  495 gtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||| || |||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  2474243 gtaacatcccatactgcttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 2474161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 189364 - 189280
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| |||||| ||||||||||||| |||||| |||| |||| |||||||||||||||||| |||||| | ||||||||    
T  189364 ctgtaacatcccagactactttcaggattgcggactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 2194099 - 2194016
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||| ||||||||||| |||||| | ||||||||    
T  2194099 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcg 2194016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 15512863 - 15512926
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    ||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  15512863 tgtaatatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttca 15512926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 42788497 - 42788580
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||||||||||| |||||||| ||| |||| |||||| ||||||||||| |||||| | ||||||||    
T  42788497 tgtaacatcccagactgctttcaggattgtcgactgactccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcg 42788580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 496 - 566
Target Start/End: Original strand, 21883938 - 21884008
Alignment:
Q  496 taacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||| ||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||| ||||||    
T  21883938 taacatcccagactgctttcaagattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 21884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 30684862 - 30684934
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| || |||||||||| ||||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  30684862 tgtaacatctcaaactgctttcaagattgccgattgaccccacaaaccaacacgagtcttttcagcgtgtttt 30684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 577
Target Start/End: Original strand, 17445303 - 17445389
Alignment:
Q  491 tcctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||| ||| |  |||| ||||||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  17445303 tcctgtaacatcccaggcgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 17445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 34868073 - 34868001
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||||||||||||| || |||| |||  |||||||||||||| ||| ||||||    
T  34868073 tgtaacatcccagactgctttcaggattgccgacggatcccacaaatcaacacgagtctttttagcgtgtttt 34868001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 30720111 - 30720183
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| ||||||||||||| ||||| ||| |||| ||| |||| |||| ||||||||||||| ||||||    
T  30720111 tgtaacatcccagactgctttcaagattgtcgattgactccacaaaccaacaggagtcttttcagcgtgtttt 30720183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 11160605 - 11160686
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    ||||||||| || |||||||| | ||||| ||||| |  ||||||| ||||||||||||||||| | |||||| ||||||||    
T  11160605 tgtaacatctcaaactgcttttatgattgtcgactaattccataaattaacacgagtcttttcaacgtgttttgttctcact 11160686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 22557265 - 22557181
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt-cagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  | |||||||||| |||||||||| | |||| |||||||||||||| |||| |||||| | ||||||||    
T  22557265 tgtaacatcccagacgacattcaggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcg 22557181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 29679959 - 29680030
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||  |||| || ||||||||||||||| | |||| |||||||||||||||||| ||||||    
T  29679959 tgtaacatc-cagacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgtttt 29680030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 24182097 - 24182180
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||| |   |||||||||||| ||||| |||||| |||| ||||||| |||||||| | |||||| | ||||||||    
T  24182097 tgtaacatcacaaatgactttcaggattgtcgactaaccccacaaaccaacacgaatcttttcaacgtgttttatcctcactcg 24182180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 30719656 - 30719739
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||  |||||| ||| ||||||| ||| |||||||| ||| ||| ||||||||||| || ||||||| ||||| ||||    
T  30719656 tgtaacatctaagactgtttttaggattggcgattgaccccacaaattaatacgagtctttttagtatgttttgttctctctcg 30719739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 575
Target Start/End: Original strand, 20858392 - 20858474
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||||||| || ||| |||||||||||| |||||||||  | |||  ||||||||| |||||||| |||||| | ||||||    
T  20858392 ctgtaacatcccaaacttctttcaggattgtcgactgacctaacaaatcaacacgagtattttcagcgtgttttgtcctcact 20858474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Original strand, 11757140 - 11757193
Alignment:
Q  502 cacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt 555  Q
    |||| |||||||| |||||||||||||||||||  |||| |||| |||||||||    
T  11757140 cacacactgcttttaggattgccgactgaccccgcaaaccaacaagagtctttt 11757193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 2058508 - 2058572
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactga-ccccataaactaacacgagtcttttca 557  Q
    ||||||||| || |||||||||||||||| | | ||| ||||| |||||||||||||| ||||||    
T  2058508 tgtaacatctcaaactgctttcaggattgtctattgacccccacaaactaacacgagttttttca 2058572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 22556832 - 22556748
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt-cagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  | || ||||||| |||||||||| | |||| |||||||||||||| |||| |||||| | ||||||||    
T  22556832 tgtaacatcccagacgacattaaggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcg 22556748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 32377758 - 32377841
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  32377758 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 32377841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 33175252 - 33175168
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| |||| |||||| | ||||||||    
T  33175252 ctgtaacatcccagactgctttcaggattgccgactgaccctacaaactaacacgagtctttccagcgtgttttgtcctcactcg 33175168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 496 - 577
Target Start/End: Complemental strand, 30966527 - 30966446
Alignment:
Q  496 taacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |||||| | ||||||||    
T  30966527 taacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcg 30966446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 25337848 - 25337931
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  25337848 tgtaacatctcagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 25337931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 30966985 - 30966902
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||| | |||||| | ||||||||    
T  30966985 tgtaacatcccagactgctttcaggattgccgactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcg 30966902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 5399668 - 5399751
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||| ||||||| |||||||||||| |||| ||||| ||||||| |||| |||||| ||||||||||    
T  5399668 tgtaacatcccagactgcttttaggattgtcgactgaccccacaaaccaacacaagtctttccagcgtgttttgttctcactcg 5399751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 32377577 - 32377650
Alignment:
Q  504 cagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||| |||||| | ||||||||    
T  32377577 cagactgcttttaggattgccgactgaccccacaaaccaacacgagttttttcagcgtgttttgtcctcactcg 32377650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 24818621 - 24818537
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| | |||| ||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  24818621 ctgtaacatccccgactactttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 24818537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 29804942 - 29804871
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttt 565  Q
    ||||||||| |||||||||||||| |||| ||||||| |||| |||| |||||||||||||||||| |||||    
T  29804942 tgtaacatcccagactgctttcagcattgtcgactgatcccacaaaccaacacgagtcttttcagcgtgttt 29804871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 33771296 - 33771213
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||| |||| |||||||||||||||||  |||||| | ||||||||    
T  33771296 tgtaacatcccagattgctttcagaattgccggctgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcg 33771213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 511 - 577
Target Start/End: Complemental strand, 11389761 - 11389695
Alignment:
Q  511 ctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||| ||||||| |||||||||||| |||| |||| |||| ||||||||||||||| ||||||||||    
T  11389761 cttttaggattgtcgactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcg 11389695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 511 - 577
Target Start/End: Complemental strand, 11406422 - 11406356
Alignment:
Q  511 ctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||| ||||||| |||||||||||| |||| |||| |||| ||||||||||||||| ||||||||||    
T  11406422 cttttaggattgtcgactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcg 11406356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 519 - 577
Target Start/End: Complemental strand, 20502234 - 20502176
Alignment:
Q  519 attgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||| | ||||||||    
T  20502234 attgccgactgaccctacaaactaacacgagtcttttcagcgtgttttgtcctcactcg 20502176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 1912819 - 1912736
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| || ||||||||||||| | | |||| |||||||||||||||| | |||||| | ||||||||    
T  1912819 tgtaacatcccagacgactttaagcattgccgactgactctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcg 1912736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 15640029 - 15639946
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| || ||||||||||||||| |  ||| ||||||||||||||| || |||||| | ||||||||    
T  15640029 tgtaacatcccagacgactttaagcattgccgactgaccctaccaaccaacacgagtcttttctgcgtgttttgtcctcactcg 15639946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 30963114 - 30963177
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    |||||||||  | |||||||||| ||||||||| ||||| || |||| ||||||||||||||||    
T  30963114 tgtaacatccaaaactgctttcatgattgccgattgacctcacaaaccaacacgagtcttttca 30963177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 577
Target Start/End: Complemental strand, 16379207 - 16379149
Alignment:
Q  519 attgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||| |||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  16379207 attgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 16379149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 566
Target Start/End: Original strand, 25433906 - 25433979
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    |||||||||| ||||   |||| || ||||||||||||||| | |||| ||||||| |||||||||| ||||||    
T  25433906 ctgtaacatcccagatgactttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgtttt 25433979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 577
Target Start/End: Original strand, 26865119 - 26865187
Alignment:
Q  509 tgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||| |||||| |||| |||||||| |||| ||||||  ||||||||||||| ||| | ||||||||    
T  26865119 tgcttttaggatttccgaatgaccccacaaaccaacacggatcttttcagcatgctttgtcctcactcg 26865187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 19261 - 19179
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  19261 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 19179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 494 - 575
Target Start/End: Complemental strand, 14820449 - 14820368
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||    
T  14820449 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcact 14820368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 494 - 559
Target Start/End: Complemental strand, 16811674 - 16811609
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagc 559  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  16811674 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagc 16811609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 50348041 - 50347958
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  50348041 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 50347958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 8067576 - 8067492
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| ||||||||||| ||||||||||| ||||| || |||| |||||||||||||||||| |||||| | ||||||||    
T  8067576 ctgtaacatcccagactgcttttaggattgccgattgacctcacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 8067492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 496 - 576
Target Start/End: Original strand, 11179887 - 11179967
Alignment:
Q  496 taacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  11179887 taacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 11179967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 14814244 - 14814172
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| ||||||    
T  14814244 tgtaacatcccagactgctttcagtattgccgactaaccccacaaaccaacacgagtcttttcagcgtgtttt 14814172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 13150405 - 13150488
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||  |||||||||||||||||| |||||| | ||||||||    
T  13150405 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 13150488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 28562040 - 28561957
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || |||||||||| |||| ||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  28562040 tgtaacatctcatactgctttcaagattaccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 28561957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 39653459 - 39653376
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||| || |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  39653459 tgtaacatcccagactgcttttagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 39653376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 497 - 575
Target Start/End: Original strand, 13149953 - 13150031
Alignment:
Q  497 aacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||    
T  13149953 aacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcact 13150031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 32386595 - 32386668
Alignment:
Q  504 cagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||| |||||| | ||||||||    
T  32386595 cagactgctttcaagattgccgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcg 32386668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 31284127 - 31284199
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| |||| |||||||| |||||||||||||||||| |||| ||||||||||||||| || ||||||    
T  31284127 tgtaacatcccagattgctttcatgattgccgactgaccccacaaaccaacacgagtcttttcggcgtgtttt 31284199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 16811220 - 16811137
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||| ||||||||||||||||||| ||||||| |||| ||||||| |||||||||| | |||| | ||||||||    
T  16811220 tgtaacatcccagattgctttcaggattgccgaccgaccccacaaaccaacacgaatcttttcagcgtattttgtcctcactcg 16811137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 32227072 - 32227135
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||    
T  32227072 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttca 32227135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 41473836 - 41473753
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || |||||||||| ||||| |||||||||||| |||| |||||| ||||||||||| |||||| | ||||||||    
T  41473836 tgtaacatctcatactgctttcacgattggcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcg 41473753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 566
Target Start/End: Original strand, 27187190 - 27187252
Alignment:
Q  504 cagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||| |||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||    
T  27187190 cagactgttttcagaattgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 27187252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 493 - 557
Target Start/End: Complemental strand, 32227796 - 32227732
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    |||||||||| |||||||||||||| |||| |||||||||| | |||| ||||||||||||||||    
T  32227796 ctgtaacatcccagactgctttcagcattgtcgactgaccctacaaaccaacacgagtcttttca 32227732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 37045328 - 37045244
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| |||||  |||| || |||| |||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  37045328 ctgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 37045244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 18318950 - 18318867
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||||||  ||||| |||||||||| || ||| | |||| ||| ||| |||||||||| |||||| ||||||||||    
T  18318950 tgtaacatcacagacgactttctggattgccgattgtcccaacaaaccaacccgaatcttttcagcgtgttttgttctcactcg 18318867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 514 - 577
Target Start/End: Original strand, 53150683 - 53150746
Alignment:
Q  514 tcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||  ||||||||||| ||||||||| ||||||||||| |||||||| | ||||||||    
T  53150683 tcaggattgttgactgaccccacaaactaacatgagtcttttcaacatgttttgtcctcactcg 53150746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 520 - 573
Target Start/End: Complemental strand, 26436316 - 26436264
Alignment:
Q  520 ttgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctca 573  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||    
T  26436316 ttgccgactg-ccccaaaaaccaacacgagtcttttcagcatgttttgttctca 26436264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 25238978 - 25239060
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| || ||  |||| || |||| |||||||||| | |||| |||||||||||||||||| |||||| | |||||||    
T  25238978 tgtaacatctcatacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25239060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 25248407 - 25248346
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt 555  Q
    ||||||||| ||||||||||| ||||||| ||||| ||| || |||  ||||||||||||||    
T  25248407 tgtaacatcccagactgcttttaggattgtcgactaacctcacaaatcaacacgagtctttt 25248346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 566
Target Start/End: Original strand, 20884968 - 20885040
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| || ||  |||| || ||||| ||||||||| | |||| |||||||||||||||||| ||||||    
T  20884968 tgtaacatcccaaacgactttaagcattgcagactgaccctacaaaccaacacgagtcttttcagcgtgtttt 20885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 13384 - 13467
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  13384 tgtaacatcccggactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 13467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 106015 - 105932
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||| | ||||||||    
T  106015 tgtaacatctcagactgctttcagaattgccgactgaccctataaaccaacacgagtcttttcagcgtgttttgtcctcactcg 105932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 107314 - 107397
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| || |||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  107314 tgtaacatcccagactgctttcagaatagccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcg 107397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 22548400 - 22548483
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  22548400 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 22548483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 32292236 - 32292153
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  32292236 tgtaacatcccagactgctttcaggattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 32292153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 34308330 - 34308412
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||||||| |||||| | |||||||    
T  34308330 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactc 34308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 34308786 - 34308868
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  34308786 tgtaacatcccagactgctttcaggattgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 34308868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 22026675 - 22026611
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcag 558  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  22026675 tgtaacatcccagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcag 22026611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 22548846 - 22548929
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||| | ||||||||    
T  22548846 tgtaacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcg 22548929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 21315961 - 21316044
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||| ||||||| ||| |||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  21315961 tgtaacatcccagactgcttttaggattgtcgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 21316044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 27022190 - 27022273
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||| ||||||| |||||||||||| |||| |||||||||||||| ||| |||||| | ||||||||    
T  27022190 tgtaacatcccagactgcttttaggattgtcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcg 27022273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 12827105 - 12827166
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt 555  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  12827105 tgtaacatcccagactgctttcaggattgtcgactgaccccacaaaccaacacgagtctttt 12827166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 25147819 - 25147748
Alignment:
Q  505 agactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| | ||||||||    
T  25147819 agactgctttcaggattgccgactga-cccacaaaccaacacgagtcttttcagcgtgttttgtactcactcg 25147748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 25148261 - 25148189
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||||| || |||||||| ||||||| |||||||||||| |||| |||||||||||||||||| ||||||    
T  25148261 tgtaacatctcatactgcttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgtttt 25148189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 17103377 - 17103294
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| ||||||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  17103377 tgtaacatcccagacgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 17103294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 510 - 577
Target Start/End: Original strand, 41658972 - 41659039
Alignment:
Q  510 gctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  41658972 gctttcagcattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 41659039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 9251180 - 9251098
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    |||||||||| |||||||||||||||||| ||| |||||||| |||| ||||| ||| |||||||| |||||| | |||||||    
T  9251180 tgtaacatcatagactgctttcaggattgtcgattgaccccacaaaccaacacaagttttttcagcgtgttttgtcctcactc 9251098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 10844466 - 10844549
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| ||||||| |||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  10844466 tgtaacatcccagacgacttttaggattgtcgactgaccctacaaacaaacacgagtcttttcagcgtgttttgtcctcactcg 10844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 27926193 - 27926110
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| || |||| |||||||||| | |||| ||||||||||||||||||||||||| | ||||||||    
T  27926193 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcactcg 27926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 511 - 577
Target Start/End: Complemental strand, 12100968 - 12100902
Alignment:
Q  511 ctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  12100968 ctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 12100902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 27021840 - 27021903
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    ||||||||| || |||| ||||||||||||||||||||  || |||| ||||||||||||||||    
T  27021840 tgtaacatctcatactgttttcaggattgccgactgacttcacaaaccaacacgagtcttttca 27021903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 577
Target Start/End: Complemental strand, 28453628 - 28453550
Alignment:
Q  499 catcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||| ||||||||||| ||||||| ||||||| |  | |||| ||||||| ||||||||||||||||| | ||||||||    
T  28453628 catcccagactgcttttaggattgtcgactgatcttacaaacaaacacgactcttttcagcatgttttgtcctcactcg 28453550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 511 - 559
Target Start/End: Complemental strand, 25308042 - 25307994
Alignment:
Q  511 ctttcaggattgccgactgaccccataaactaacacgagtcttttcagc 559  Q
    |||| ||||||||||||||| ||||||||  ||||||||||||||||||    
T  25308042 cttttaggattgccgactgatcccataaatcaacacgagtcttttcagc 25307994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 31283503 - 31283566
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    ||||||||| |||||  ||||||  |||| |||||||||||| |||| ||||||||||||||||    
T  31283503 tgtaacatcccagacgactttcaacattgtcgactgaccccacaaaccaacacgagtcttttca 31283566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 533
Target Start/End: Complemental strand, 32292699 - 32292660
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccc 533  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  32292699 tgtaacatcccagactgcttttaggattgccgactgaccc 32292660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 577
Target Start/End: Complemental strand, 29117514 - 29117448
Alignment:
Q  511 ctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||| ||||| ||||| | |||| ||||||||||||||||| ||| ||| | ||||||||    
T  29117514 ctttcaggattaccgaccgaccctacaaaccaacacgagtcttttcaggatgatttgtcctcactcg 29117448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 577
Target Start/End: Complemental strand, 6466549 - 6466468
Alignment:
Q  496 taacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||| |||||  ||||||| ||||||||||| ||||| |||| ||||| |||||||| ||| || ||| | ||||||||    
T  6466549 taacatcccagacgactttcagtattgccgactggccccacaaaccaacacaagtctttttagcgtgctttgtcctcactcg 6466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 41913240 - 41913184
Alignment:
Q  519 attgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||| |||||||||| |||||||||||||||| |||||| | |||||| | ||||||    
T  41913240 attgtcgactgaccctataaactaacacgagttttttcaacgtgttttgtcctcact 41913184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 4e-21; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 494 - 578
Target Start/End: Original strand, 162985 - 163069
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcga 578  Q
    ||||||||| ||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||| |||||| | |||||||||    
T  162985 tgtaacatcccagactgttttcaggattgccgactggccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcga 163069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 162531 - 162612
Alignment:
Q  497 aacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtc-ttttcagcatgttttcttctcactcg 577  Q
    |||||| || ||||||||||||||||||||||||||||| |||| |||||||||| |||||||| |||||| | ||||||||    
T  162531 aacatcccatactgctttcaggattgccgactgaccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcg 162612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 163366 - 163283
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||||||||||| |||| ||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  163366 tgtaacatcccagacgactttcaggattgtcgacagaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 163283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 69666 - 69727
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt 555  Q
    ||||||||| || |||||||||||||||||||||||| || | |||| ||||||||||||||    
T  69666 tgtaacatcccaaactgctttcaggattgccgactgaaccaacaaaccaacacgagtctttt 69727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 545
Target Start/End: Original strand, 162483 - 162534
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaaca 545  Q
    ||||||||| |||| |||||| |||||||||||||||||||| |||| ||||    
T  162483 tgtaacatctcagattgcttttaggattgccgactgaccccacaaaccaaca 162534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 14553 - 14636
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| || ||||||||| |||| ||||||||||||||||||||||||| | ||||||||    
T  14553 tgtaacatcccagactgctttcagcattgtcggctgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcg 14636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 1515 - 1432
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||||||||||||||||||| |||||||| ||| |||| |||||||||||||||||| |||||| | ||||||||    
T  1515 tgtaacatcccagactgctttcaggattgtcgactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 1432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 3037 - 2954
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||  ||||||||||||| ||||||||||||||||| |||  |||||||||||||||||| |||||| | ||||||||    
T  3037 tgtaacatccgagactgctttcagcattgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 154597 - 154514
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||  |||||||||||||||||| |||||| | ||||||||    
T  154597 tgtaacatcccagactgctttcagcattgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 154514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 497 - 575
Target Start/End: Complemental strand, 155049 - 154971
Alignment:
Q  497 aacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcact 575  Q
    |||||| |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||    
T  155049 aacatcccagactgctttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcact 154971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 494 - 576
Target Start/End: Original strand, 1552 - 1634
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||| ||||||||||||||||||  |||||||||||| |||| |||||||||||||| ||| |||||| | |||||||    
T  1552 tgtaacatcccagactgctttcaggattatcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactc 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 605 - 523
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    |||||||||  ||||| |||| |||||||||||||||||||| |||| |||||||||||||||||| |||||| | |||||||    
T  605 tgtaacatccgagactacttttaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 10595 - 10511
Alignment:
Q  493 ctgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    |||||||||| | |||| ||||||| |||| |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||    
T  10595 ctgtaacatccccgactactttcagcattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 10511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 2391 - 2308
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||| ||| ||||||||||| ||||||| ||||||| || | |||| |||||||||||||||||| |||||||| ||||||||    
T  2391 tgtaaaatcccagactgcttttaggattgtcgactgatcctacaaaccaacacgagtcttttcagcgtgttttctcctcactcg 2308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 503 - 566
Target Start/End: Original strand, 62967 - 63030
Alignment:
Q  503 acagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgtttt 566  Q
    ||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||| ||||||    
T  62967 acagactactttcaggattgccgactgaccccacaaaccaatacgagtcttttcagcgtgtttt 63030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 67214 - 67275
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtctttt 555  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||| ||||    
T  67214 tgtaacatcacagactgctttcaggattgccgattgaccccacaaaccaacacaagtgtttt 67275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 506 - 576
Target Start/End: Complemental strand, 245831 - 245761
Alignment:
Q  506 gactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||||| | |||||||    
T  245831 gactgctttcaggattcccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactc 245761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 507 - 576
Target Start/End: Complemental strand, 245364 - 245295
Alignment:
Q  507 actgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactc 576  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||| | |||||| | |||||||    
T  245364 actgctttcaggattgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactc 245295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 1902 - 1985
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| || ||  |||| ||||||| |||||||||||| |||| |||||||||||||||||| | |||| | ||||||||    
T  1902 tgtaacatcccaaacgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtattttgtcctcactcg 1985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 496 - 559
Target Start/End: Complemental strand, 68 - 5
Alignment:
Q  496 taacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagc 559  Q
    ||||||| || |||||||| ||||||||| |||||||| | |||| ||||||||||||||||||    
T  68 taacatcccaaactgcttttaggattgcctactgaccctacaaaccaacacgagtcttttcagc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 5315 - 5232
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| |||||  |||| || |||| |||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  5315 tgtaacatcccagacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 5232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 4855 - 4772
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||| ||| |  |||| || |||| |||||||||| | |||| |||||||||||||||||| |||||| | ||||||||    
T  4855 tgtaacatcccagtcgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 4772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 557
Target Start/End: Original strand, 2061 - 2124
Alignment:
Q  494 tgtaacatcacagactgctttcaggattgccgactgaccccataaactaacacgagtcttttca 557  Q
    ||||||||| |||||  |||| ||||||| |||||||||||| |||| ||||||||||||||||    
T  2061 tgtaacatcccagacaacttttaggattgtcgactgaccccacaaaccaacacgagtcttttca 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 17474 - 17532
Alignment:
Q  519 attgccgactgaccccataaactaacacgagtcttttcagcatgttttcttctcactcg 577  Q
    ||||||||||||||| || ||| |||||||||||||||||| |||||| | ||||||||    
T  17474 attgccgactgaccctatgaaccaacacgagtcttttcagcgtgttttgtcctcactcg 17532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University