View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17164_high_1 (Length: 658)

Name: NF17164_high_1
Description: NF17164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17164_high_1
NF17164_high_1
[»] chr3 (69 HSPs)
chr3 (17-642)||(1178088-1178715)
chr3 (160-295)||(30807152-30807290)
chr3 (160-295)||(25289714-25289851)
chr3 (156-294)||(39041852-39041993)
chr3 (160-294)||(49258262-49258399)
chr3 (160-295)||(15566499-15566636)
chr3 (175-295)||(10083818-10083941)
chr3 (160-294)||(52821636-52821772)
chr3 (160-295)||(8456149-8456287)
chr3 (155-294)||(18176887-18177029)
chr3 (172-295)||(26174185-26174311)
chr3 (160-295)||(40133448-40133586)
chr3 (160-295)||(53233910-53234047)
chr3 (160-294)||(35492971-35493108)
chr3 (161-295)||(45272415-45272552)
chr3 (160-295)||(53424176-53424313)
chr3 (175-295)||(10190741-10190864)
chr3 (160-295)||(46576408-46576546)
chr3 (160-295)||(8097278-8097416)
chr3 (160-295)||(30257684-30257822)
chr3 (160-295)||(45529754-45529891)
chr3 (160-294)||(21363003-21363140)
chr3 (156-294)||(32151480-32151621)
chr3 (161-294)||(24407322-24407458)
chr3 (193-295)||(24165714-24165817)
chr3 (172-295)||(48977460-48977586)
chr3 (175-293)||(25379836-25379957)
chr3 (156-294)||(33398468-33398609)
chr3 (160-294)||(34492575-34492712)
chr3 (213-294)||(7485531-7485613)
chr3 (209-293)||(48104986-48105073)
chr3 (237-295)||(53848433-53848492)
chr3 (194-293)||(21776510-21776611)
chr3 (193-295)||(25344057-25344160)
chr3 (163-257)||(1242036-1242132)
chr3 (160-295)||(2511296-2511434)
chr3 (160-295)||(40940885-40941023)
chr3 (173-294)||(50731237-50731358)
chr3 (173-294)||(50781496-50781617)
chr3 (227-294)||(25017618-25017685)
chr3 (156-286)||(4252404-4252537)
chr3 (172-295)||(7195886-7196005)
chr3 (172-295)||(8958034-8958161)
chr3 (160-295)||(51532849-51532987)
chr3 (160-295)||(52455648-52455786)
chr3 (160-251)||(26108352-26108445)
chr3 (195-294)||(54475777-54475878)
chr3 (179-294)||(1692913-1693030)
chr3 (237-294)||(4048089-4048147)
chr3 (172-294)||(31537838-31537963)
chr3 (177-269)||(34844455-34844549)
chr3 (247-295)||(3747730-3747779)
chr3 (160-228)||(8455971-8456038)
chr3 (172-276)||(29915288-29915394)
chr3 (172-276)||(29964441-29964547)
chr3 (176-269)||(50583068-50583163)
chr3 (237-286)||(55371302-55371352)
chr3 (160-294)||(4462693-4462829)
chr3 (182-295)||(32094756-32094872)
chr3 (172-216)||(7203213-7203257)
chr3 (255-295)||(11390760-11390800)
chr3 (237-289)||(30695251-30695303)
chr3 (155-287)||(49167111-49167249)
chr3 (176-257)||(7470254-7470336)
chr3 (173-289)||(26158891-26159003)
chr3 (174-224)||(53167737-53167787)
chr3 (179-232)||(24460065-24460118)
chr3 (160-228)||(10682884-10682952)
chr3 (186-226)||(36660859-36660899)
[»] chr5 (60 HSPs)
chr5 (160-294)||(19145412-19145548)
chr5 (172-295)||(19456210-19456335)
chr5 (160-295)||(27498730-27498868)
chr5 (156-295)||(33709502-33709642)
chr5 (160-295)||(38684268-38684405)
chr5 (172-295)||(8484660-8484786)
chr5 (172-294)||(11926501-11926627)
chr5 (160-295)||(15641105-15641242)
chr5 (160-295)||(18207267-18207405)
chr5 (160-295)||(30485888-30486026)
chr5 (172-295)||(32059439-32059565)
chr5 (175-295)||(35425088-35425211)
chr5 (160-295)||(7085625-7085763)
chr5 (160-294)||(34310202-34310339)
chr5 (156-295)||(4603833-4603975)
chr5 (179-294)||(9659311-9659429)
chr5 (172-295)||(10869564-10869690)
chr5 (209-295)||(41351103-41351191)
chr5 (176-285)||(42193561-42193671)
chr5 (160-295)||(37495107-37495252)
chr5 (172-289)||(11464913-11465032)
chr5 (173-294)||(27487554-27487679)
chr5 (172-294)||(6014280-6014405)
chr5 (174-269)||(16247026-16247124)
chr5 (165-295)||(31206307-31206441)
chr5 (237-294)||(22693074-22693132)
chr5 (160-294)||(36895485-36895622)
chr5 (172-294)||(25750613-25750734)
chr5 (160-295)||(21236361-21236499)
chr5 (160-295)||(31287945-31288083)
chr5 (237-295)||(38630978-38631037)
chr5 (209-295)||(22392797-22392886)
chr5 (160-228)||(2499247-2499315)
chr5 (244-295)||(10631288-10631340)
chr5 (176-294)||(23270522-23270643)
chr5 (156-218)||(10824038-10824100)
chr5 (237-295)||(12317154-12317212)
chr5 (172-294)||(5049209-5049333)
chr5 (193-294)||(13659245-13659348)
chr5 (207-295)||(8821091-8821182)
chr5 (227-283)||(5067390-5067447)
chr5 (164-285)||(10076776-10076900)
chr5 (178-294)||(15485291-15485411)
chr5 (172-224)||(25587004-25587056)
chr5 (193-294)||(34049905-34050008)
chr5 (160-295)||(12398447-12398585)
chr5 (160-224)||(15931119-15931182)
chr5 (160-295)||(26009263-26009401)
chr5 (193-294)||(10813851-10813954)
chr5 (215-286)||(13038463-13038537)
chr5 (171-286)||(18172861-18172979)
chr5 (241-295)||(25548533-25548588)
chr5 (160-286)||(36954878-36955007)
chr5 (237-286)||(13108458-13108508)
chr5 (237-294)||(41084122-41084180)
chr5 (208-265)||(27569459-27569516)
chr5 (242-294)||(28614486-28614539)
chr5 (188-220)||(3586308-3586340)
chr5 (255-295)||(3599997-3600037)
chr5 (262-294)||(7151468-7151500)
[»] scaffold0070 (1 HSPs)
scaffold0070 (160-295)||(40385-40522)
[»] chr4 (66 HSPs)
chr4 (160-295)||(34844757-34844895)
chr4 (160-295)||(40058851-40058989)
chr4 (160-295)||(5609201-5609339)
chr4 (164-293)||(25969504-25969633)
chr4 (160-293)||(52983679-52983815)
chr4 (160-295)||(27528794-27528932)
chr4 (172-295)||(32986269-32986395)
chr4 (160-294)||(34723859-34723996)
chr4 (152-294)||(20566402-20566547)
chr4 (172-294)||(33696279-33696404)
chr4 (172-292)||(20077986-20078109)
chr4 (160-294)||(49287918-49288054)
chr4 (160-295)||(7391964-7392100)
chr4 (175-295)||(32990510-32990633)
chr4 (164-295)||(19660531-19660665)
chr4 (156-295)||(44343570-44343712)
chr4 (160-295)||(45787703-45787841)
chr4 (173-295)||(46714466-46714591)
chr4 (160-285)||(9517650-9517778)
chr4 (172-295)||(55961753-55961878)
chr4 (175-295)||(54127341-54127464)
chr4 (160-295)||(18875516-18875653)
chr4 (160-294)||(25852274-25852412)
chr4 (176-294)||(35229243-35229365)
chr4 (173-255)||(25445279-25445359)
chr4 (160-289)||(32942430-32942562)
chr4 (164-294)||(13716450-13716583)
chr4 (172-295)||(28791187-28791312)
chr4 (160-295)||(36131509-36131647)
chr4 (175-293)||(13550283-13550404)
chr4 (160-294)||(51535673-51535818)
chr4 (237-294)||(23639763-23639821)
chr4 (237-294)||(23645421-23645479)
chr4 (237-294)||(52494627-52494685)
chr4 (164-252)||(10125884-10125973)
chr4 (160-294)||(35674749-35674878)
chr4 (185-232)||(42281169-42281216)
chr4 (237-295)||(43719086-43719145)
chr4 (160-294)||(1985896-1986031)
chr4 (229-294)||(4064991-4065057)
chr4 (237-294)||(9978509-9978567)
chr4 (172-294)||(12500059-12500183)
chr4 (179-295)||(21387486-21387603)
chr4 (160-224)||(33992686-33992750)
chr4 (160-294)||(34835589-34835726)
chr4 (230-294)||(37302619-37302684)
chr4 (156-295)||(13584253-13584395)
chr4 (232-295)||(23131435-23131499)
chr4 (209-295)||(27574427-27574516)
chr4 (172-295)||(30879165-30879290)
chr4 (225-294)||(55158343-55158413)
chr4 (160-293)||(24273282-24273418)
chr4 (156-293)||(20527035-20527174)
chr4 (160-220)||(22630263-22630323)
chr4 (160-228)||(37455637-37455704)
chr4 (160-294)||(41085086-41085222)
chr4 (255-294)||(33289212-33289251)
chr4 (172-294)||(51595094-51595219)
chr4 (237-294)||(7093510-7093568)
chr4 (237-294)||(12824539-12824597)
chr4 (237-294)||(17637852-17637909)
chr4 (179-220)||(12710258-12710299)
chr4 (179-220)||(39288938-39288978)
chr4 (172-213)||(41621680-41621721)
chr4 (244-295)||(8442049-8442101)
chr4 (262-294)||(24672305-24672337)
[»] chr8 (58 HSPs)
chr8 (160-295)||(4718709-4718847)
chr8 (160-295)||(34237654-34237792)
chr8 (160-294)||(6953008-6953144)
chr8 (160-293)||(28193538-28193674)
chr8 (161-294)||(18128578-18128714)
chr8 (160-295)||(3734622-3734760)
chr8 (160-295)||(8765525-8765663)
chr8 (160-295)||(39349320-39349458)
chr8 (160-294)||(21603294-21603431)
chr8 (160-295)||(2618250-2618388)
chr8 (160-295)||(32879343-32879481)
chr8 (172-295)||(20305984-20306110)
chr8 (172-295)||(21092617-21092743)
chr8 (176-295)||(42328084-42328206)
chr8 (160-293)||(15259407-15259543)
chr8 (156-250)||(21239409-21239503)
chr8 (160-295)||(14633018-14633156)
chr8 (208-295)||(2639410-2639500)
chr8 (161-294)||(42643118-42643254)
chr8 (160-295)||(4698722-4698860)
chr8 (172-294)||(3403502-3403627)
chr8 (172-295)||(19471685-19471812)
chr8 (172-295)||(19542609-19542736)
chr8 (172-295)||(19589960-19590087)
chr8 (160-294)||(20469981-20470117)
chr8 (160-294)||(264400-264536)
chr8 (160-294)||(651385-651521)
chr8 (160-294)||(837120-837256)
chr8 (209-294)||(10292167-10292255)
chr8 (160-294)||(25248413-25248547)
chr8 (156-294)||(12312906-12313046)
chr8 (160-295)||(34610686-34610824)
chr8 (160-295)||(27746334-27746472)
chr8 (169-294)||(2166770-2166897)
chr8 (172-257)||(20505629-20505715)
chr8 (172-287)||(36848757-36848874)
chr8 (179-295)||(1219432-1219551)
chr8 (171-287)||(26168856-26168974)
chr8 (172-295)||(28964109-28964234)
chr8 (172-220)||(34639284-34639332)
chr8 (179-295)||(24018465-24018585)
chr8 (173-285)||(28088363-28088478)
chr8 (179-295)||(18532190-18532300)
chr8 (249-294)||(9713609-9713655)
chr8 (163-241)||(30482605-30482683)
chr8 (156-205)||(8387536-8387585)
chr8 (173-295)||(8042724-8042844)
chr8 (174-268)||(13749133-13749231)
chr8 (172-224)||(28908899-28908951)
chr8 (156-220)||(41070821-41070885)
chr8 (237-295)||(33747025-33747084)
chr8 (213-293)||(7557952-7558034)
chr8 (172-295)||(34694574-34694701)
chr8 (156-205)||(34778798-34778847)
chr8 (176-225)||(38964141-38964190)
chr8 (263-295)||(10544924-10544956)
chr8 (160-220)||(13579980-13580040)
chr8 (244-295)||(33534566-33534618)
[»] chr7 (63 HSPs)
chr7 (160-295)||(22119952-22120090)
chr7 (160-295)||(40542909-40543047)
chr7 (160-295)||(654704-654841)
chr7 (160-295)||(2751335-2751473)
chr7 (160-295)||(21835215-21835353)
chr7 (160-295)||(2103119-2103255)
chr7 (160-294)||(7275341-7275478)
chr7 (156-294)||(17196950-17197091)
chr7 (160-295)||(7175861-7175999)
chr7 (160-295)||(29861734-29861872)
chr7 (160-294)||(41907514-41907650)
chr7 (160-295)||(21217832-21217970)
chr7 (160-295)||(11997913-11998051)
chr7 (161-295)||(16374059-16374196)
chr7 (160-294)||(18044171-18044308)
chr7 (175-295)||(23012507-23012630)
chr7 (160-295)||(10091252-10091389)
chr7 (160-295)||(22703550-22703688)
chr7 (172-295)||(23092172-23092298)
chr7 (160-294)||(28647033-28647170)
chr7 (179-294)||(3851840-3851958)
chr7 (172-295)||(28089892-28090021)
chr7 (172-293)||(19421307-19421431)
chr7 (173-295)||(21574101-21574226)
chr7 (174-295)||(23330738-23330862)
chr7 (156-289)||(1766149-1766284)
chr7 (173-295)||(42913512-42913637)
chr7 (156-295)||(31273974-31274115)
chr7 (172-295)||(2344375-2344501)
chr7 (156-294)||(7262277-7262416)
chr7 (237-294)||(31712902-31712960)
chr7 (160-287)||(17212117-17212247)
chr7 (160-295)||(27312216-27312354)
chr7 (209-293)||(32849704-32849791)
chr7 (175-293)||(9683905-9684026)
chr7 (176-294)||(36772303-36772424)
chr7 (193-295)||(31197688-31197792)
chr7 (160-294)||(39145652-39145789)
chr7 (172-294)||(27009435-27009561)
chr7 (209-293)||(22638401-22638488)
chr7 (173-294)||(27704079-27704202)
chr7 (172-251)||(8435741-8435820)
chr7 (172-294)||(28950947-28951072)
chr7 (175-269)||(23636590-23636687)
chr7 (172-294)||(22696396-22696522)
chr7 (156-295)||(9717986-9718128)
chr7 (160-220)||(35476405-35476465)
chr7 (237-294)||(25333546-25333603)
chr7 (163-295)||(13332433-13332557)
chr7 (175-270)||(21373789-21373887)
chr7 (156-192)||(28136252-28136288)
chr7 (160-232)||(36173099-36173171)
chr7 (156-295)||(43785298-43785440)
chr7 (160-203)||(47380962-47381005)
chr7 (208-294)||(48199383-48199470)
chr7 (176-226)||(1469192-1469242)
chr7 (257-295)||(22299966-22300004)
chr7 (172-270)||(11909978-11910079)
chr7 (242-294)||(25102809-25102862)
chr7 (240-292)||(30345511-30345564)
chr7 (237-294)||(47381034-47381091)
chr7 (156-192)||(22299909-22299945)
chr7 (160-227)||(42814928-42814995)
[»] chr6 (34 HSPs)
chr6 (160-295)||(34147406-34147544)
chr6 (160-295)||(34160022-34160160)
chr6 (160-295)||(21982320-21982457)
chr6 (160-295)||(3222635-3222772)
chr6 (160-294)||(9208312-9208449)
chr6 (160-295)||(15360097-15360235)
chr6 (160-294)||(11448931-11449068)
chr6 (160-294)||(654146-654283)
chr6 (160-293)||(9239035-9239171)
chr6 (156-295)||(21148510-21148651)
chr6 (160-295)||(1344995-1345133)
chr6 (179-294)||(9690638-9690756)
chr6 (172-294)||(33499547-33499672)
chr6 (176-294)||(5360071-5360192)
chr6 (160-294)||(28672127-28672264)
chr6 (160-295)||(12390485-12390620)
chr6 (173-292)||(10377788-10377911)
chr6 (156-295)||(17081053-17081195)
chr6 (213-294)||(15730495-15730579)
chr6 (172-295)||(9844010-9844136)
chr6 (160-292)||(17149458-17149593)
chr6 (179-294)||(14504082-14504200)
chr6 (226-295)||(14213010-14213080)
chr6 (162-294)||(11840963-11841097)
chr6 (179-295)||(11007244-11007363)
chr6 (172-294)||(17225739-17225863)
chr6 (174-251)||(6383919-6383998)
chr6 (175-295)||(21903618-21903748)
chr6 (156-217)||(3907597-3907657)
chr6 (208-295)||(17706318-17706408)
chr6 (262-295)||(7491665-7491698)
chr6 (160-224)||(12591697-12591761)
chr6 (237-285)||(33718478-33718527)
chr6 (159-191)||(9583432-9583464)
[»] chr2 (60 HSPs)
chr2 (160-295)||(44946052-44946190)
chr2 (160-295)||(24196064-24196200)
chr2 (160-294)||(30466830-30466967)
chr2 (160-295)||(33827572-33827710)
chr2 (160-295)||(35171860-35171998)
chr2 (160-295)||(2140485-2140620)
chr2 (173-295)||(28668946-28669071)
chr2 (173-294)||(11941210-11941334)
chr2 (160-295)||(8192351-8192488)
chr2 (160-294)||(17324826-17324961)
chr2 (160-295)||(15038019-15038157)
chr2 (180-295)||(34516413-34516530)
chr2 (172-294)||(36390569-36390693)
chr2 (160-295)||(43374329-43374462)
chr2 (160-228)||(4618754-4618822)
chr2 (160-287)||(36242319-36242449)
chr2 (183-295)||(19054108-19054224)
chr2 (161-258)||(26176235-26176333)
chr2 (161-294)||(41329904-41330039)
chr2 (174-294)||(27269344-27269467)
chr2 (161-295)||(3943801-3943938)
chr2 (229-295)||(18692091-18692158)
chr2 (160-275)||(44976172-44976291)
chr2 (160-294)||(13266550-13266686)
chr2 (211-294)||(25293269-25293356)
chr2 (160-295)||(5394077-5394215)
chr2 (172-294)||(19174835-19174959)
chr2 (160-294)||(10581995-10582127)
chr2 (160-295)||(41314052-41314189)
chr2 (160-205)||(28194225-28194270)
chr2 (160-294)||(14946839-14946975)
chr2 (180-294)||(19605846-19605962)
chr2 (172-295)||(4567428-4567562)
chr2 (237-295)||(14486964-14487023)
chr2 (237-295)||(18976454-18976513)
chr2 (237-295)||(39957897-39957956)
chr2 (209-294)||(31778140-31778228)
chr2 (209-294)||(44610148-44610236)
chr2 (160-295)||(8258957-8259095)
chr2 (174-226)||(13747576-13747628)
chr2 (255-295)||(27290732-27290772)
chr2 (211-287)||(45132398-45132477)
chr2 (161-294)||(6006890-6007025)
chr2 (174-232)||(27290662-27290720)
chr2 (161-215)||(12543205-12543259)
chr2 (237-294)||(44929846-44929904)
chr2 (160-225)||(35797522-35797587)
chr2 (160-224)||(45271444-45271508)
chr2 (156-212)||(30943152-30943208)
chr2 (179-285)||(9641101-9641208)
chr2 (160-203)||(19525490-19525533)
chr2 (181-294)||(38784181-38784295)
chr2 (247-295)||(1501463-1501511)
chr2 (226-294)||(4852657-4852726)
chr2 (172-228)||(23787077-23787133)
chr2 (172-205)||(40591255-40591288)
chr2 (160-224)||(3405225-3405289)
chr2 (176-232)||(16510305-16510361)
chr2 (240-295)||(28194137-28194193)
chr2 (172-216)||(29698219-29698263)
[»] chr1 (63 HSPs)
chr1 (160-295)||(4621236-4621374)
chr1 (160-295)||(15059401-15059539)
chr1 (160-294)||(24122083-24122220)
chr1 (160-294)||(9500355-9500492)
chr1 (160-294)||(24674453-24674590)
chr1 (175-293)||(17935844-17935965)
chr1 (160-295)||(32729605-32729742)
chr1 (160-295)||(7766726-7766864)
chr1 (160-295)||(27454863-27455003)
chr1 (160-294)||(7197247-7197383)
chr1 (160-292)||(8077707-8077841)
chr1 (160-295)||(8254751-8254889)
chr1 (172-295)||(30677248-30677374)
chr1 (172-290)||(1378970-1379090)
chr1 (160-295)||(46607870-46608008)
chr1 (160-295)||(7578469-7578607)
chr1 (211-293)||(37351454-37351538)
chr1 (209-294)||(26513148-26513235)
chr1 (160-294)||(36155888-36156025)
chr1 (160-289)||(18646913-18647045)
chr1 (193-293)||(36921513-36921616)
chr1 (164-269)||(37047056-37047164)
chr1 (160-216)||(19034467-19034523)
chr1 (164-294)||(40802069-40802200)
chr1 (156-257)||(7946900-7947002)
chr1 (160-294)||(1486478-1486617)
chr1 (160-295)||(23734176-23734315)
chr1 (160-295)||(23741368-23741507)
chr1 (208-293)||(34778447-34778535)
chr1 (179-286)||(8779744-8779854)
chr1 (172-294)||(16539680-16539804)
chr1 (162-294)||(31162812-31162947)
chr1 (161-269)||(19480595-19480708)
chr1 (156-295)||(39714649-39714791)
chr1 (160-294)||(45859043-45859180)
chr1 (237-295)||(48699898-48699957)
chr1 (160-267)||(1138639-1138748)
chr1 (160-217)||(16899563-16899620)
chr1 (160-256)||(23232300-23232402)
chr1 (170-294)||(809292-809419)
chr1 (255-295)||(14603954-14603994)
chr1 (160-216)||(25237070-25237126)
chr1 (173-295)||(27159159-27159283)
chr1 (172-228)||(34965401-34965457)
chr1 (158-284)||(43769975-43770103)
chr1 (173-294)||(45331621-45331746)
chr1 (173-228)||(20907330-20907385)
chr1 (237-295)||(22910010-22910069)
chr1 (244-294)||(23041668-23041719)
chr1 (176-226)||(2783065-2783115)
chr1 (245-294)||(5315478-5315528)
chr1 (160-289)||(21726789-21726921)
chr1 (237-294)||(35138127-35138185)
chr1 (175-286)||(40145889-40146008)
chr1 (172-212)||(1095088-1095128)
chr1 (176-295)||(2272420-2272542)
chr1 (173-225)||(20999235-20999287)
chr1 (164-228)||(40397342-40397406)
chr1 (164-257)||(17447338-17447432)
chr1 (175-295)||(26986084-26986206)
chr1 (179-232)||(47360450-47360503)
chr1 (156-192)||(6127963-6127999)
chr1 (156-192)||(31605824-31605860)
[»] scaffold0576 (1 HSPs)
scaffold0576 (160-295)||(5081-5219)
[»] scaffold0102 (1 HSPs)
scaffold0102 (156-295)||(39148-39290)
[»] scaffold0019 (1 HSPs)
scaffold0019 (160-295)||(161869-162007)
[»] scaffold0217 (1 HSPs)
scaffold0217 (160-294)||(7309-7446)
[»] scaffold0051 (1 HSPs)
scaffold0051 (160-295)||(52870-53008)
[»] scaffold0366 (2 HSPs)
scaffold0366 (160-295)||(9299-9436)
scaffold0366 (172-295)||(12000-12125)
[»] scaffold0623 (1 HSPs)
scaffold0623 (160-294)||(1057-1193)
[»] scaffold0459 (1 HSPs)
scaffold0459 (172-295)||(10694-10818)
[»] scaffold0016 (1 HSPs)
scaffold0016 (172-295)||(32360-32485)
[»] scaffold0026 (1 HSPs)
scaffold0026 (160-294)||(97366-97503)
[»] scaffold0049 (1 HSPs)
scaffold0049 (209-294)||(66863-66951)
[»] scaffold0160 (1 HSPs)
scaffold0160 (160-294)||(29143-29279)
[»] scaffold0328 (2 HSPs)
scaffold0328 (172-285)||(15063-15178)
scaffold0328 (160-294)||(13047-13181)
[»] scaffold0199 (2 HSPs)
scaffold0199 (237-294)||(8451-8509)
scaffold0199 (160-196)||(8508-8544)
[»] scaffold1175 (1 HSPs)
scaffold1175 (193-294)||(2426-2529)
[»] scaffold0157 (1 HSPs)
scaffold0157 (172-294)||(20294-20418)
[»] scaffold0068 (1 HSPs)
scaffold0068 (160-295)||(41644-41781)
[»] scaffold0020 (2 HSPs)
scaffold0020 (226-294)||(123066-123134)
scaffold0020 (160-202)||(123146-123188)
[»] scaffold0717 (1 HSPs)
scaffold0717 (179-252)||(1-76)


Alignment Details
Target: chr3 (Bit Score: 579; Significance: 0; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 579; E-Value: 0
Query Start/End: Original strand, 17 - 642
Target Start/End: Original strand, 1178088 - 1178715
Alignment:
Q  17 acttccttgacaatggttgccttgattcatccattctgatcattttcacaagaaaatgcaaaatctcattagaaaac-aattgtgtttatgcatccatgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1178088 acttccttgacaatggttgccttgattcatccattctgatcattttcacaagaaaatgcaaaatctcattagaaaaccaattgtgtttatgcatccatgt 1178187  T
Q  116 ataatcttcattttaatgctagttttcttttagaaagtgatcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctct 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1178188 ataatcttcattttaatgctagttttcttttagaaagtgatcaggttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctct 1178287  T
Q  216 ggctttaaatggg-ccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagttttcnnnnnnncaaagaaagtga 314  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||    
T  1178288 ggctttaaatggggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagttttcaaaaaaacaaagaaagtga 1178387  T
Q  315 tacttacaaaggaaattcattgtcatcatccacactcttatccaagtcttcattatcatcttttctcatattaccaagttggttctgtctttgcttccat 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1178388 tacttacaaaggaaattcattgtcatcatccacactcttatccaagtcttcattatcatcttttctcatattaccaagttggttctgtctttgcttccat 1178487  T
Q  415 agctccatcctatccttccaagcaacacttccatagccataagcagctaggtccttggaaggatccattggtcttgcttgcaataaagttatctcttttc 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1178488 agctccatcctatccttccaagcaacacttccatagccataagcagctaggtccttggaaggatccattggtcttgcttgcaataaagttatctcttttc 1178587  T
Q  515 tcataattgttgaatttattaaaggaactatagcatgatgctcttcagacgacagctcctcaccctgttccaatgagtgcatgcatgcaaaatagaaagt 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1178588 tcataattgttgaatttattaaaggaactatagcatgatgctcttcagacgacagttcctcaccctgttccaatgagtgcatgcatgcaaaatagaaagt 1178687  T
Q  615 atataagcaataattttctctctccttc 642  Q
    ||||||||||||||||| ||||||||||    
T  1178688 atataagcaataattttttctctccttc 1178715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 30807290 - 30807152
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtc 255  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||||| |||||||||    
T  30807290 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcggtaggattggtc 30807192  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30807191 cctcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 25289851 - 25289714
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  25289851 gttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 25289753  T
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  25289752 ctcgaattagtcgattcttggatcggataccgagttttc 25289714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 39041993 - 39041852
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||| ||| |||||||||||||| |||  |||| || ||||| ||||||||||    
T  39041993 tcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattg 39041895  T
Q  253 gtcc-ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  39041894 gtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 49258399 - 49258262
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  49258399 gttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggcggtgggattggtcc 49258301  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  49258300 cctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 15566636 - 15566499
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 257  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  || |||||||||||||||||||||    
T  15566636 gttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattggtccc 15566538  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     || |||||||||| ||||||||||||||||||||||||    
T  15566537 ctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 10083941 - 10083818
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| |||| |||||||||||||||| |||||||||||||    
T  10083941 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcga 10083843  T
Q  271 atcttggatcggataccgagttttc 295  Q
     ||||||||||||||||||||||||    
T  10083842 ttcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 52821772 - 52821636
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc 257  Q
    ||||||||| | |||||||||||||||||| || ||||||||||||| ||| |||||||||||||| ||| ||||  | |||||||||||||||||||||    
T  52821772 gttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggccccgtaagtgggcggtgggattggtccc 52821674  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||||||||||||| |||||||||||||||||||||||    
T  52821673 ctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 8456287 - 8456149
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||| |||||||||||||    
T  8456287 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcagtgggattggtcc 8456189  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||| ||||||||||||||||||    
T  8456188 cctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 18177029 - 18176887
Alignment:
Q  155 atcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggatt 251  Q
    |||| ||||||||| | ||||||||||||||||||| | ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||    
T  18177029 atcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggatt 18176931  T
Q  252 ggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||    
T  18176930 ggtcccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 26174185 - 26174311
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||| ||  |||| || ||||||||||||||||||||| ||||||||||    
T  26174185 ctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagt 26174283  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| ||||||||||||||||||||||||    
T  26174284 cgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 40133586 - 40133448
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40133586 gttcgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40133488  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  40133487 cctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 53234047 - 53233910
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||| |||| |||  |||| || |||||||||||||||||| |    
T  53234047 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctctaaacggggcccccgcaagtgggcggtgggattggtcc 53233949  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  53233948 cctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 35492971 - 35493108
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  35492971 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 35493069  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| |||||||| | ||||||||||||    
T  35493070 cctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 161 - 295
Target Start/End: Complemental strand, 45272552 - 45272415
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 257  Q
    |||||||| | ||||||||||||||||||||| |||||||||| || ||| |||||||||||||| |||  |||| || |||||||||||||||||||||    
T  45272552 ttcgattccctctggtgccaatttcggtgggctaagtccatacggagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc 45272454  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     |||||||||| || ||||||||||||||||||||||||    
T  45272453 ctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 53424313 - 53424176
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 257  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||||  |||||| |||||||||| |||||||  || ||| |||||||||||||||||    
T  53424313 gttcgattccctttggtgccaatttcggtgggctaagtccatacagag-tttgctatggctttaaacgggcccccgcaagtgagcggtgggattggtccc 53424215  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  53424214 ctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 10190864 - 10190741
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||| |||||||||||||||| |||||||||||||    
T  10190864 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcga 10190766  T
Q  271 atcttggatcggataccgagttttc 295  Q
     ||||||||||||||||||||||||    
T  10190765 ttcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 46576408 - 46576546
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||| ||||||||||    
T  46576408 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtcggattggtcc 46576506  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | | ||||||||||| ||||||||||||||||||||||||    
T  46576507 ccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 8097416 - 8097278
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || |||| ||||||| ||||| ||||||||||||| | | |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  8097416 gttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 8097318  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  8097317 cctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 30257684 - 30257822
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||| ||| | ||||||||||||| ||| ||||||||||||||||||  |||| || ||||||||||| ||||||||    
T  30257684 gttcgattccctttggtgccaatttcgatggactaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcc 30257782  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||||||||||||||||| |||||    
T  30257783 cctcggattagtcgattcttggatcggataccgaattttc 30257822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 45529891 - 45529754
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggt-c 255  Q
    ||||||||| | |||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||| | |  |||||||||||||||||| |    
T  45529891 gttcgattccctctggagccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 45529793  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  45529792 cctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 21363003 - 21363140
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | |||||| |||||||||| ||| ||||||||||||| ||| |||||||||||||| ||   |||| || |||||||||||||||||| |    
T  21363003 gttcgattccctctggtgtcaatttcggtaggctaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattggttc 21363101  T
Q  256 cctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  21363102 cctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 32151480 - 32151621
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    |||| |||||||||| || |||||||||||||||||| |||  |||||||| ||| |||||||||||||| |||  |||| || |||||||||| |||||    
T  32151480 tcaaattcgattctctctagtgccaatttcggtgggctaagctcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgagattg 32151578  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  32151579 gtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 24407322 - 24407458
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc 257  Q
    |||||||||| ||||||| ||||||||||||  ||||  |||||||| ||||||||| ||||||| ||| ||  | || |||||||||||||||||||||    
T  24407322 ttcgattctctctggtgctaatttcggtgggttaagtatatacagaa-tttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtccc 24407420  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||||||||||||| |||||||||||||||||||||||    
T  24407421 ctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 295
Target Start/End: Complemental strand, 24165817 - 24165714
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgag 290  Q
    ||||||||||||| ||| |||||||||||||| ||| |||| || |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  24165817 aagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgag 24165719  T
Q  291 ttttc 295  Q
    |||||    
T  24165718 ttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 48977460 - 48977586
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| ||| |||   || ||||||||||||||||||||| ||||||||||    
T  48977460 ctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagt 48977558  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||   |||||||||||||||||||||||    
T  48977559 cggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 25379836 - 25379957
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    ||||||||||||| |||| ||||||||||||| ||| |||||||||||||| |||  |||| || | ||||||||||||||||||| |||||||||||||    
T  25379836 gtgccaatttcggagggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcga 25379934  T
Q  271 atcttggatcggataccgagttt 293  Q
     ||||||||||||||| ||||||    
T  25379935 ttcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 33398609 - 33398468
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaa-gtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | || |||||||||| ||||||  | ||||||||||| ||| ||||| |||||||| |||  |||| || ||||||||||||||||    
T  33398609 tcaagttcgattccctctagtgccaattttggtgggttatgtccatacagagctt-gctctagctttaaacggggcccccgcaagtgggcggtgggattg 33398511  T
Q  253 gt-ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    || |||||| ||||||||| |||||||||||||||||| ||||    
T  33398510 gttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 34492712 - 34492575
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||| ||||||||||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  34492712 gttcgattccctctgctgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 34492614  T
Q  257 ct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
     | | ||||||| || ||||||||| |||||||||||||    
T  34492613 attcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 7485613 - 7485531
Alignment:
Q  213 tctggctttaaatgggcccca-cacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||  ||||||  || |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7485613 tctggctttaaacaggcccctgcaagtggccggtgggattggtccctcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 48104986 - 48105073
Alignment:
Q  209 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagttt 293  Q
    ||||||||||||||||  ||  ||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  48104986 ttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 53848492 - 53848433
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  53848492 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 194 - 293
Target Start/End: Original strand, 21776510 - 21776611
Alignment:
Q  194 agtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagt 291  Q
    |||||||||||||||||||||||||||||||||||  ||||||   ||| |||||| |||||||||  |||||||||||  ||||||  |||||||||||    
T  21776510 agtccatacagaactttgctctggctttaaatgggctccccactaatggacggtggaattggtccccgggattagtcgatccttggaatggataccgagt 21776609  T
Q  292 tt 293  Q
    ||    
T  21776610 tt 21776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 193 - 295
Target Start/End: Complemental strand, 25344160 - 25344057
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgag 290  Q
    |||||||||||||  ||||||||||||||||| ||| ||| | |  ||||||| |||||||||| ||||||||||||||| |||| ||||| ||||||||    
T  25344160 aagtccatacagag-tttgctctggctttaaacggggcccccgctagtgggcgatgggattggttcctcggattagtcgattcttagatcgaataccgag 25344062  T
Q  291 ttttc 295  Q
    |||||    
T  25344061 ttttc 25344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 1242036 - 1242132
Alignment:
Q  163 cgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattggtccc 257  Q
    |||||| | ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||  ||| ||| || ||||||||||| |||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtccc 1242132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 2511434 - 2511296
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc- 255  Q
    ||||||||| | ||||||||||||||||||||| |||| |||||||| | | |||||| ||||||| |||  | || || |||||||||||||||||||     
T  2511434 gttcgattccctctggtgccaatttcggtgggctaagttcatacagagc-tcgctctgactttaaacgggacctccgcaagtgggcggtgggattggtct 2511336  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| |||||| || ||||| |||||||||| |||||||    
T  2511335 cctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 40940885 - 40941023
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||||| | |||||||| ||||||| |||  ||||||| ||||| ||| |||||||| |    
T  40940885 gttcgattccctctggtgccaatttcggtggactaagtccatacagagc-ttgctctgactttaaacggggcccccacaagtgggtggtaggattggtcc 40940983  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| |||| || | ||||| ||| ||||||||||||||    
T  40940984 cctcgaattactcaattcttgaatcagataccgagttttc 40941023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 50731358 - 50731237
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||| ||||||||||||| |||||||||| ||| |   |||||| |||  || |||||| |||| ||||||||||||||||||||| || ||||||||||    
T  50731358 tggtaccaatttcggtggacaagtccatatagagca--gctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcga 50731261  T
Q  271 atcttggatcggataccgagtttt 294  Q
      ||||||||||||||||||||||    
T  50731260 tccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 50781496 - 50781617
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||| ||||||||||||| |||||||||| ||| |   |||||| |||  || |||||| |||| ||||||||||||||||||||| || ||||||||||    
T  50781496 tggtaccaatttcggtggacaagtccatatagagca--gctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcga 50781593  T
Q  271 atcttggatcggataccgagtttt 294  Q
      ||||||||||||||||||||||    
T  50781594 tccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 25017618 - 25017685
Alignment:
Q  227 ggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  25017618 ggccccgcaagtgggcggtgggattggttccttggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 286
Target Start/End: Complemental strand, 4252537 - 4252404
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg--gccccacacgtgggcggtgggattgg 253  Q
    ||||||| ||||| | |||||||||||||| |||  |||||||||||| | |||| |||||| ||  || ||   ||||||| |||| ||||||||||||    
T  4252537 tcaagtttgattccctctggtgccaatttcagtgatcaagtccatacaaagctttactctggtttagaacggcccccccacaagtggacggtgggattgg 4252438  T
Q  254 t-ccctcggattagtcgaatcttggatcggatac 286  Q
    | ||||||||||||||||  ||||||||||||||    
T  4252437 tcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 7195886 - 7196005
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggt-ccctcggattagtc 268  Q
    ||||||| ||||||||| |||||||||||||||       ||||| ||||||||||||||| |||  |||||| ||||||||||| ||||| ||||||||    
T  7195886 ctggtgctaatttcggtcggcaagtccatacag-------ctctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtc 7195978  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
    || |||| |||  ||||||||||||||    
T  7195979 gattctttgattagataccgagttttc 7196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 8958161 - 8958034
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tggg--ccccacacgtgggcggtgggattggtccc-tcggattag 266  Q
    |||||| |||||| ||||||| ||||||||||| | ||| ||||| |||||||| ||||  |||| || ||||||||||||||||||||| || |||||     
T  8958161 ctggtgtcaattttggtgggctaagtccatacaaagctt-gctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccctctgattaa 8958063  T
Q  267 tcgaatcttggatcggataccgagttttc 295  Q
    |||| ||||||||| ||||||||||||||    
T  8958062 tcgattcttggatcagataccgagttttc 8958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 51532849 - 51532987
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||||| ||  ||||||||||||||||| ||||||||||||| | |||||||  |||||||||||  |||| || |||| ||||||||||||| |    
T  51532849 gttcgattctctctaatgccaatttcggtgggctaagtccatacagagc-ttgctctaactttaaatgggacccccgcaagtggacggtgggattggtcc 51532947  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||| |||||||||  |||||   || |||||||||||||    
T  51532948 cctcagattagtcggttcttgatccgaataccgagttttc 51532987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 52455786 - 52455648
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||| | ||||| ||||| | ||||| ||| |||||| ||||||| |||  |||| || |||   ||||||||||||||    
T  52455786 gttcgattccctctggtgccaattttgatgggctaagtctacacagagctt-gctctgactttaaacggggcccccgcaagtgactggtgggattggtcc 52455688  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||||||| |||||||||||||||    
T  52455687 cctcggattagtcgattcttggattggataccgagttttc 52455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 26108352 - 26108445
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggatt 251  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||  |||| || |||||| ||||||||    
T  26108352 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 54475777 - 54475878
Alignment:
Q  195 gtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagt 291  Q
    ||||||||||| ||| ||| |||||||||| ||| ||  | || ||||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  54475777 gtccatacagagctt-gctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagt 54475875  T
Q  292 ttt 294  Q
    |||    
T  54475876 ttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 1692913 - 1693030
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcgaatctt 275  Q
    |||||||||||| | ||||| ||||||||||| |||||||||||| |  ||||||  || ||||||||||||||| | ||| || |||||||||| ||||    
T  1692913 caatttcggtggactaagtctatacagaactt-gctctggctttagacaggcccccgcaagtgggcggtgggatttgccccctcagattagtcgattctt 1693011  T
Q  276 ggatcggataccgagtttt 294  Q
    | |||||||||||||||||    
T  1693012 gaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 4048089 - 4048147
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||||| |||||||||| || |||||||||||||||||||||||    
T  4048089 gtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 31537963 - 31537838
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg-gcccca-cacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||| ||||||| ||||| ||||||| |||  ||||||||||||| || |||||  || |||||||||| |||||||||| ||| ||||||    
T  31537963 ctggtgccaattttggtgggctaagtctatacagagctta-ctctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagt 31537865  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    | | |||||||||||||| ||||||||    
T  31537864 caattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 34844455 - 34844549
Alignment:
Q  177 gccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg-tccctcggattagtcg 269  Q
    |||||||||||||| | ||| |||||||| ||||||| |||||||||||||| |||| || ||||  |||||||||||  |||||||||||||||    
T  34844455 gccaatttcggtggactagtacatacagagctttgctatggctttaaatgggcccccgcaagtggatggtgggattggacccctcggattagtcg 34844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  247 ggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 8456038 - 8455971
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||||| || || ||||||| | |||||||||||||||| ||| ||||||||||||||||||||    
T  8456038 gttcgattctctctagtaccaattttgatgggcaagtccatacataac-ttgctctggctttaaatggg 8455971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 29915394 - 29915288
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    ||||||||| ||||||||||| |||| |||||||| ||| || ||||||||||| |||||||  || |||||||||||||||| |||| ||| |||||||    
T  29915394 ctggtgccattttcggtgggctaagtacatacagagctt-gccctggctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtc 29915296  T
Q  269 gaatcttg 276  Q
    || |||||    
T  29915295 gattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 29964547 - 29964441
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    ||||||||| ||||||||||| |||| |||||||| ||| || ||||||||||| |||||||  || |||||||||||||||| |||| ||| |||||||    
T  29964547 ctggtgccattttcggtgggctaagtacatacagagctt-gccctggctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtc 29964449  T
Q  269 gaatcttg 276  Q
    || |||||    
T  29964448 gattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 50583068 - 50583163
Alignment:
Q  176 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggtcc-ctcggattagtcg 269  Q
    ||||||||||| |||| ||||||||||| ||||||| | || |||||||||| |||||  | ||| |||||||||||||||| |||| ||||||||    
T  50583068 tgccaatttcgttgggtaagtccatacaaaactttgatttgactttaaatggagccccgtaagtgagcggtgggattggtcctctcgaattagtcg 50583163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 55371352 - 55371302
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggatac 286  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  55371352 gtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 4462693 - 4462829
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtcc- 256  Q
    ||||||||| | ||||  ||||||||| ||||| |||| |||||||| |||  |||| |||||||| ||| |||| || |||| ||||||||||| |||     
T  4462693 gttcgattccctctggcaccaatttcgatgggctaagttcatacagagctta-ctctagctttaaacggggccccgcaagtggacggtgggattgatcca 4462791  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||  | |||||||| ||||||||||||||    
T  4462792 ctcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 32094872 - 32094756
Alignment:
Q  182 tttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggtcc-ctcggattagtcgaatcttgga 278  Q
    ||||||| | ||||| ||||| |||||||| |||| ||||||||||| | | |  | | ||| |||||||||||||| |||  ||||||||  |||||||    
T  32094872 tttcggtagacaagttcatacggaactttgttctgcctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttgga 32094773  T
Q  279 tcggataccgagttttc 295  Q
    |||||||||||||||||    
T  32094772 tcggataccgagttttc 32094756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 7203213 - 7203257
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctg 216  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||    
T  7203213 ctggtgccaatttcggtaggcaagtccatatagagctttgctctg 7203257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 11390760 - 11390800
Alignment:
Q  255 ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  11390760 ccctcggattagtcgattcttggatcggatactgagttttc 11390800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 30695303 - 30695251
Alignment:
Q  237 gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccga 289  Q
    ||||||| ||||||||||||||| |||||||||   |||||||||||||||||    
T  30695303 gtgggcgatgggattggtccctcagattagtcggtccttggatcggataccga 30695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 287
Target Start/End: Original strand, 49167111 - 49167249
Alignment:
Q  155 atcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaac--tttgctctggctttaaatggg--ccccacacgtgggcggtggga 249  Q
    |||| ||||||||||| |||||| |||||||||||| | ||||||||||| | |  ||||||||||||||||| |||  |||| || ||||| ||||||     
T  49167111 atcaggttcgattctctctggtgtcaatttcggtggactaagtccatacatagcgttttgctctggctttaaacgggacccccgcaagtgggtggtgggg 49167210  T
Q  250 ttgg-tccctcggattagtcgaatcttggatcggatacc 287  Q
    |||| ||||| | ||||||||  || |||||| ||||||    
T  49167211 ttggttcccttgaattagtcggttcatggatcagatacc 49167249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 7470336 - 7470254
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 257  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||||||| ||| |||  || |||||| ||||||||||||||    
T  7470336 tgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggccctgcaagtgggcagtgggattggtccc 7470254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 26158891 - 26159003
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcg 269  Q
    ||||||||||||||||||| ||||||||||||       |||||||||  || ||   |||| || |||||||||||||||| |||| ||||||||||||    
T  26158891 tggtgccaatttcggtgggtaagtccatacag-------ctctggcttagaacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcg 26158983  T
Q  270 aatcttggatcggataccga 289  Q
       |||||||||||||||||    
T  26158984 gtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 53167787 - 53167737
Alignment:
Q  174 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||||| ||| ||| |||||||||||| |||||| |||||||||||    
T  53167787 ggtgccaattttggtaggccagtccatacagagctttgccctggctttaaa 53167737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 24460065 - 24460118
Alignment:
Q  179 caatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 232  Q
    |||||||||||||||||| |||||||| |   ||||| ||||||||||||||||    
T  24460065 caatttcggtgggcaagtacatacagagcaaagctctagctttaaatgggcccc 24460118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 10682952 - 10682884
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    |||| ||||||| |||| |||||||| | |||| |||||||||| | |||||| || ||||||||||||    
T  10682952 gttcaattctccttggtcccaatttcagcgggctagtccatacaaagctttgcgctagctttaaatggg 10682884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 36660859 - 36660899
Alignment:
Q  186 ggtgggcaagtccatacagaactttgctctggctttaaatg 226  Q
    |||||||||||||||||| |||||| ||||| |||||||||    
T  36660859 ggtgggcaagtccatacaaaactttcctctgcctttaaatg 36660899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 4e-40; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 19145548 - 19145412
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggt-ccc 257  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| || |||||||||||||||||| |||    
T  19145548 gttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattggtcccc 19145449  T
Q  258 tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||| |  |||||||||||||||||||||||    
T  19145448 tcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 19456335 - 19456210
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |||| || ||||||||||||||||||||| |||||||||||    
T  19456335 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtc 19456237  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
    || ||||||||||||||||||||||||    
T  19456236 gattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 27498868 - 27498730
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  27498868 gttcgattccctctggtgccaatttcggtgggctaagtccatacatagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 27498770  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  27498769 cctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 33709642 - 33709502
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||     |||||||||||||| |||  ||||||| ||||||||||||||||    
T  33709642 tcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagaga---gctctggctttaaacgggacccccacaagtgggcggtgggattg 33709546  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  33709545 gtcccctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 38684268 - 38684405
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 257  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  || ||| |||||||||||||||||    
T  38684268 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgagcggtgggattggtccc 38684366  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     ||||||||||||| |||||||||||||||||| |||||    
T  38684367 ctcggattagtcgattcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 8484786 - 8484660
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||| |||| |||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||    
T  8484786 ctggtgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagt 8484688  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| ||||||||||||||||||||||||    
T  8484687 cgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 11926627 - 11926501
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 266  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||   |||| || ||||| ||||||||||||||| |||||||||    
T  11926627 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattag 11926529  T
Q  267 tcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||||||||||||    
T  11926528 tcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 15641242 - 15641105
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||||| |    
T  15641242 gttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 15641144  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  15641143 cctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 18207267 - 18207405
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||| ||| | |||||||||||| | |  |||| || ||||||||||||||||||||    
T  18207267 gttcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcc 18207365  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  18207366 cctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 30485888 - 30486026
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatg--ggccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| |  | |||| || ||||||||||||||||||||    
T  30485888 gttcgattcactctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcc 30485986  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||| | ||||||||||||||||||||||||    
T  30485987 cctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 32059565 - 32059439
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||    
T  32059565 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagt 32059467  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||   |||||||||||||||||||||||    
T  32059466 cggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 35425088 - 35425211
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcga 270  Q
    |||||||||||||||||| ||||||||||||| ||  |||||||||||||| |||  |||| || |||||||||||||||||||| ||||||||||||||    
T  35425088 gtgccaatttcggtgggctaagtccatacagagctc-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcga 35425186  T
Q  271 atcttggatcggataccgagttttc 295  Q
     |||||||||||||||||| |||||    
T  35425187 ttcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 7085763 - 7085625
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || ||| |||||||||||||| ||||||||||||| ||| |||||| ||||||| |||  |||| || ||||||||||||||||||||    
T  7085763 gttcgattccctctagtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggtccccgcaagtgggcggtgggattggtcc 7085665  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||| ||||||||||||||||||    
T  7085664 cctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 34310202 - 34310339
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||| |||  ||||| | |||| |||||||||||||||    
T  34310202 gttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacgggacccccataagtggacggtgggattggtcc 34310300  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||| |||| |||| |||||||||||||||||||||||    
T  34310301 cctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 4603833 - 4603975
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattg 252  Q
    |||||||||||||   ||||||||||||||| ||||| ||||||||||||| ||  |||||||||||||| ||| |||   || |||| |||||||||||    
T  4603833 tcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctc-gctctggctttaaacggggcccctgcaagtggacggtgggattg 4603931  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||||||||||||   |||||||||||||||||||||||    
T  4603932 gtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 9659429 - 9659311
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccct-cggattagtcgaatct 274  Q
    |||||||||||||| ||||||||||| | ||| |||||||||||||||||||||| | |  |||| ||||||||||||||||| ||||||||| || |||    
T  9659429 caatttcggtgggctaagtccatacacagctt-gctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattct 9659331  T
Q  275 tggatcggataccgagtttt 294  Q
    ||||| ||||||||||||||    
T  9659330 tggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 10869690 - 10869564
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||| ||||||||||||||| ||||||| || || ||| |||||||||||||||||| ||  | || ||||||||||||||||||||| ||||||||||    
T  10869690 ctggttccaatttcggtgggctaagtccacactgagctt-gctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagt 10869592  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||  |||||||||||||||| |||||||    
T  10869591 cggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 41351191 - 41351103
Alignment:
Q  209 ttgctctggctttaaatgggcc-ccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| ||| | || || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41351191 ttgctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 42193561 - 42193671
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatc 273  Q
    ||||||||||||||||| ||||| |||||||  |||||| ||||||||||||| |||| || |||||||||||| ||||||| |||||||||||||| ||    
T  42193561 tgccaatttcggtgggctaagtctatacagag-tttgctttggctttaaatggaccccgcaagtgggcggtggggttggtcctctcggattagtcgattc 42193659  T
Q  274 ttggatcggata 285  Q
    ||||||| ||||    
T  42193660 ttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 37495107 - 37495252
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac---------gtgggcggtggga 249  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||| |  |||| | |         |||||||||||||    
T  37495107 gttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacgcccccccccccgcccgcaagtgggcggtggga 37495205  T
Q  250 ttggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  37495206 ttggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 11465032 - 11464913
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    ||||||||||||| ||||||| |||| |||||||| |||  ||||||||||||| ||| |||| || ||||| ||||||||||||||| ||| |||||||    
T  11465032 ctggtgccaattttggtgggctaagttcatacagagctta-ctctggctttaaacggggccccgcaagtgggtggtgggattggtcccctcgaattagtc 11464934  T
Q  269 gaatcttggatcggataccga 289  Q
    || ||||||||||||||||||    
T  11464933 gattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 27487679 - 27487554
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca---cacgtgggcggtgggattggtccc-tcggattagt 267  Q
    |||||||||||||||||| | ||||||||||||| ||| ||||| |||||||| |||  ||    || ||||||||||||||||||||| ||||||||||    
T  27487679 tggtgccaatttcggtggactaagtccatacagagctt-gctctagctttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagt 27487581  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    ||| ||||||||||||||| |||||||    
T  27487580 cgattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 6014405 - 6014280
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| |||  |||| |  |||||||||| |||| ||||| ||| ||||||    
T  6014405 ctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagt 6014307  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    ||| |||||||||||||| ||||||||    
T  6014306 cgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 16247124 - 16247026
Alignment:
Q  174 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tccctcggattagtcg 269  Q
    ||||||||| | ||||||| |||||||||||||||||||| ||| ||||||||||  ||||||| |||| ||||||||||||  |||||||||||||||    
T  16247124 ggtgccaatcttggtgggctagtccatacagaactttgctttgggtttaaatgggctccccacaagtggacggtgggattggacccctcggattagtcg 16247026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 31206307 - 31206441
Alignment:
Q  165 attctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-cctcg 260  Q
    |||| ||||||||||||||||  ||| | ||||||||||||| || |||||| ||||||||||||  ||||||| |||| |||||||||||| | |||||    
T  31206307 attccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggacccccacaagtggacggtgggattggactcctcg 31206406  T
Q  261 gattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||   |||||  ||||||||||||||||    
T  31206407 gattagtcggtccttgggccggataccgagttttc 31206441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 22693074 - 22693132
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  22693074 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 36895485 - 36895622
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa--tgggccccacacgtgggcggtgggattggtc-c 256  Q
    ||||||||| | ||||| ||||||||||||| |||||||||||| | ||||||||||||||  ||  | | | || || |||||||| ||||||| || |    
T  36895485 gttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaacgtagccgccgcaagtgggcggggggattgttctc 36895584  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| ||||||||  |||||||||||||||||||||||    
T  36895585 ctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 25750734 - 25750613
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccct-cggattagtcg 269  Q
    ||||||||||||||||||||  ||||||||| ||| ||| ||||||||||  || ||| ||| || ||||| |||| ||||||||||| | |||||||||    
T  25750734 ctggtgccaatttcggtgggttaagtccatatagagctt-gctctggctt--aacgggacccccaagtggggggtgagattggtcccttcagattagtcg 25750638  T
Q  270 aatcttggatcggataccgagtttt 294  Q
    | |||||||||||||||||||||||    
T  25750637 attcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 21236499 - 21236361
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| || ||| |||||||  ||||| |||||||||||||  ||| ||||| ||||||| |||  |||| || ||||||||||||||| ||||    
T  21236499 gttcgattctctctagtgtcaatttcaatgggctaagtccatacagagtttt-ctctgactttaaacggggcccccgcaagtgggcggtgggattagtcc 21236401  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | || |||||||||| ||||| ||||||||||||||||||    
T  21236400 cctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 31288083 - 31287945
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc- 255  Q
    ||||||||| |  |||||||||||||||||||  ||||||||||| | ||| ||| || ||||||| |||  |||| || |||||||||||||||||||     
T  31288083 gttcgattccctttggtgccaatttcggtgggttaagtccatacaaagctt-gctttgactttaaacggggcccccgcaagtgggcggtgggattggtct 31287985  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||||||||  ||||||| ||||||||||||||||    
T  31287984 cctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 38631037 - 38630978
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  38631037 gtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 22392797 - 22392886
Alignment:
Q  209 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| |||  |||| || ||||||||||| ||||||||| || |||||||||| | ||||||||||||||||||||||    
T  22392797 ttgctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 2499315 - 2499247
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||||||||| || |||||||| |||||||||||||| ||| | || |||||||||||||||||    
T  2499315 gttcgattctccctgttgtcaatttcgatgggcaagtccatatagagccttactctggctttaaatggg 2499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  244 gtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 23270643 - 23270522
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaa 271  Q
    ||||||||||||||||| ||||||||||||| ||| ||| |||||||||| ||   |||| ||  ||| |||||||||||||||| |||||||||| ||     
T  23270643 tgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgat 23270545  T
Q  272 tcttggatcggataccgagtttt 294  Q
    |||||||| ||||||| ||||||    
T  23270544 tcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 10824100 - 10824038
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggc 218  Q
    |||||||||||| || || |||||||||||| ||||||||||| |||||| ||||||||||||    
T  10824100 tcaagttcgattatctctagtgccaatttcgatgggcaagtccttacagagctttgctctggc 10824038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 12317212 - 12317154
Alignment:
Q  237 gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| |||||||||| ||||||||||||||| | |||| |||||||||||||||||||    
T  12317212 gtgggtggtgggattgatccctcggattagtcaattcttagatcggataccgagttttc 12317154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 5049209 - 5049333
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    ||||| ||||||||| ||| | |||| |||||||| ||| |||||||||||||| ||| |||| ||  ||| |||||||||||||||| ||| |||||||    
T  5049209 ctggtaccaatttcgatggtctaagttcatacagagctt-gctctggctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtc 5049307  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
    || |||||||||| ||||| ||||||    
T  5049308 gattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 13659348 - 13659245
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccga 289  Q
    ||||||||| ||||||| ||| || ||||||| |||  |||| || |||||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  13659348 aagtccatagagaactt-gctttgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccga 13659250  T
Q  290 gtttt 294  Q
     ||||    
T  13659249 atttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 8821091 - 8821182
Alignment:
Q  207 ctttgctctggctttaaat-gggcccca-cacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||||| |||| ||| || ||||| ||||||||||||| || || ||||||| | ||||||||| ||||||||||||||    
T  8821091 ctttgctctggctttaaattgggctccaacaagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagttttc 8821182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 5067390 - 5067447
Alignment:
Q  227 ggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcgga 283  Q
    |||||| || |||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  5067390 ggccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 10076900 - 10076776
Alignment:
Q  164 gattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcg 260  Q
    ||||| ||||| ||||| ||| ||||||  ||||||||||||| || ||||||  |||||||||||  ||||||| |||| ||||||||| |  |||||     
T  10076900 gattccccctgatgccagttttggtgggataagtccatacagagctatgctctaactttaaatgggtcccccacaagtggacggtgggatcgaaccctca 10076801  T
Q  261 gattagtcgaatcttggatcggata 285  Q
    ||||| |||  ||||||||||||||    
T  10076800 gattaatcggttcttggatcggata 10076776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 294
Target Start/End: Complemental strand, 15485411 - 15485291
Alignment:
Q  178 ccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tccctcggattagtcgaatc 273  Q
    ||||||||||||||  ||||||||||| |||| || ||||||||||||||||  |||| || ||||  |||||||||||  |||||||||||||||  ||    
T  15485411 ccaatttcggtgggttaagtccatacaaaactatgttctggctttaaatggggtccccgcaagtggatggtgggattggacccctcggattagtcggctc 15485312  T
Q  274 ttggatcggataccgagtttt 294  Q
    || | | |||||| |||||||    
T  15485311 ttaggttggatacagagtttt 15485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 25587004 - 25587056
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  25587004 ctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaa 25587056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 34049905 - 34050008
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccga 289  Q
    ||||||||||||| ||| |||||||||||||| |||  |||| || |||| |||| ||||||||||| |||||||||| || |||   ||||||||||||    
T  34049905 aagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccga 34050003  T
Q  290 gtttt 294  Q
    |||||    
T  34050004 gtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 12398585 - 12398447
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  ||||| |||||||||||| | |||| |||||||| ||| ||||||||||||||||||  |||| ||  ||| ||||| ||||| |||    
T  12398585 gttcgattccctatggtgtcaatttcggtggcctaagttcatacagagctt-gctctggctttaaatggggcccccgcaaatggacggtgagattgatcc 12398487  T
Q  257 -ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
     |||  ||||||||  |||||||| |||||||||||||||    
T  12398486 tctcaaattagtcggttcttggattggataccgagttttc 12398447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 15931119 - 15931182
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||| |  |||||||||||||||    
T  15931119 gttcgattccctctggtgccaatttcggtggctaagtccatacagagc-ctgctctggctttaaa 15931182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 26009401 - 26009263
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  ||||||||||||| |||||| |||||||| |||| |||  ||||||||||||| |||  |||| || |||||  |||||||| ||||    
T  26009401 gttcgattccctttggtgccaatttcagtgggctaagtccatgcagagctta-ctctggctttaaacggggcccccgcaagtgggtagtgggattagtcc 26009303  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||  ||||| |||| ||| |||||||||    
T  26009302 cctcggattagtcggttcttgaatcgaatatcgagttttc 26009263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 10813954 - 10813851
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgag 290  Q
    |||||||||| || ||||||||||||||||||  |||||||||| || || ||||||||| || |||| |||||||||   ||||| | || ||||||||    
T  10813954 aagtccatacggagctttgctctggctttaaacagggccccacaagtaggtggtgggatttgtccccttggattagtcagttcttgaaccgaataccgag 10813855  T
Q  291 tttt 294  Q
    ||||    
T  10813854 tttt 10813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 13038537 - 13038463
Alignment:
Q  215 tggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggatac 286  Q
    |||||||||| |||  |||| || |||||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  13038537 tggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 18172861 - 18172979
Alignment:
Q  171 cctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggtc-cctcggattagt 267  Q
    |||||| ||||||||||||| || |||||| || ||| |||||||| ||||||||||| ||| |  | |||| || | ||||||||| ||| ||| ||||    
T  18172861 cctggtaccaatttcggtggacaggtccattcaaaaccttgctctgactttaaatgggaccctcgtaagtggacgattggattggtctccttggagtagt 18172960  T
Q  268 cgaatcttggatcggatac 286  Q
    ||| |||||||| ||||||    
T  18172961 cgattcttggattggatac 18172979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 25548588 - 25548533
Alignment:
Q  241 gcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||  |||| ||||||||| |||||||||| |||||||||||||    
T  25548588 gcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttc 25548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 286
Target Start/End: Original strand, 36954878 - 36955007
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | ||||| | |||||||| | || |||||||||||||  |||||| ||||||||||||||  |||| || |||| | |||||||| || |    
T  36954878 gttcgattccctctggttctaatttcggcgtgctaagtccatacagag-tttgctttggctttaaatgggccccccgcaagtggactgtgggattagtcc 36954976  T
Q  256 cctcggattagtcgaatcttggatcggatac 286  Q
    ||||  ||||||||| |||||||||||||||    
T  36954977 cctcatattagtcgattcttggatcggatac 36955007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 13108508 - 13108458
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggatac 286  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  13108508 gtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 41084122 - 41084180
Alignment:
Q  237 gtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||| |||||| ||||| |||||||||||  ||||| |||||||||||||||||    
T  41084122 gtgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 27569459 - 27569516
Alignment:
Q  208 tttgctctggctttaaatgggccccacacgtgggcggtgggattggtccctcggatta 265  Q
    |||||||||||||||||| ||||||||| |||| | |||||||||  ||||| |||||    
T  27569459 tttgctctggctttaaataggccccacaagtggtcagtgggattgaaccctcagatta 27569516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 28614539 - 28614486
Alignment:
Q  242 cggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||| |||| ||| ||||||||| | |||||||||||||||||||||    
T  28614539 cggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 3586340 - 3586308
Alignment:
Q  188 tgggcaagtccatacagaactttgctctggctt 220  Q
    ||||| |||||||||||||||||||||||||||    
T  3586340 tgggctagtccatacagaactttgctctggctt 3586308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 3600037 - 3599997
Alignment:
Q  255 ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| ||||||||| ||||||||| ||||    
T  3600037 ccctcggattagtcgattcttggatctgataccgagatttc 3599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 7151468 - 7151500
Alignment:
Q  262 attagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||| |||||||||||||||||||||||    
T  7151468 attagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 40385 - 40522
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40385 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40483  T
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  40484 ctcggattagtcgattcttggatcggataccgagttttc 40522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 9e-38; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 34844895 - 34844757
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  34844895 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 34844797  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34844796 cctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 40058989 - 40058851
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40058989 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40058891  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  40058890 cctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 5609339 - 5609201
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||| || |||| ||||||||||| |||    
T  5609339 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtggacggtgggattgatcc 5609241  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  5609240 cctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 25969633 - 25969504
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccctcgga 262  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||  | ||| |||||||||||||||||||| |    
T  25969633 gattccccctggtgccaatttcggtggccaagtccatacagaac-ttgctctggctttaaacgggcccccgtaagtgagcggtgggattggtccctcgaa 25969535  T
Q  263 ttagtcgaatcttggatcggataccgagttt 293  Q
    |||||||| ||||| ||||||||| ||||||    
T  25969534 ttagtcgattcttgaatcggatactgagttt 25969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 160 - 293
Target Start/End: Original strand, 52983679 - 52983815
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  52983679 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 52983777  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    | ||||||||||||| ||||||||||||||||||||||    
T  52983778 cctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 27528932 - 27528794
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| | |||  |||| || |||||||||| |||||||||    
T  27528932 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttatacggggcccccgcaagtgggcggtgagattggtcc 27528834  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  27528833 cctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 32986269 - 32986395
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||  |||| || ||||||||||||||||||||| ||||| ||||    
T  32986269 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagt 32986367  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| ||||||||||||||||||||||||    
T  32986368 cgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 34723859 - 34723996
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| |||  |||| || ||||| ||||||||||||||    
T  34723859 gttcgattccctctggtgccaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcc 34723957  T
Q  257 -ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
     |||||||||||||| |||||||||||||||||||||||    
T  34723958 tctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 20566402 - 20566547
Alignment:
Q  152 gtgatcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatg--ggccccacacgtgggcggtggg 248  Q
    ||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |  | |||| || ||||||| ||||    
T  20566402 gtgatcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcgctggg 20566500  T
Q  249 attggt-ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||| ||||| |||||||||| |||||||||||||| ||||||||    
T  20566501 attggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 33696404 - 33696279
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagt 267  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||| || |||||||||| ||||||||| |||||||||||    
T  33696404 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagt 33696306  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    | | |||||||||||||| ||||||||    
T  33696305 caattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 292
Target Start/End: Complemental strand, 20078109 - 20077986
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggt-ccctcggattagt 267  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||| |  | ||||||||||||||| || |||||||||||||    
T  20078109 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagt 20078011  T
Q  268 cgaatcttggatcggataccgagtt 292  Q
    ||| |||||||||||||||||||||    
T  20078010 cgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 49287918 - 49288054
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggc-cccacacgtgggcggtgggattggt-cc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| || |||||| |||||||||| |||| ||| || ||||||| || ||||||| ||    
T  49287918 gttcgattctctctggtgccaatttcggtgggctaagtccataca-aaatttgctatggctttaaacgggctcccgcaagtgggcgctgagattggtccc 49288016  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||| ||||||||| ||||| |||||||    
T  49288017 ctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 7392100 - 7391964
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccaca-cgtgggcggtgggattggt-ccc 257  Q
    ||||||||| |  ||||||||||||||||||  |||||||||||| | ||||||||||||||||||||| ||| ||  |||||||||||||||| | |||    
T  7392100 gttcgattccctatggtgccaatttcggtggttaagtccatacag-agtttgctctggctttaaatgggacccccatagtgggcggtgggattgttcccc 7392002  T
Q  258 tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||  |||| ||| |||||||||||||||    
T  7392001 tcggattagtcggttcttcgattggataccgagttttc 7391964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 32990510 - 32990633
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcga 270  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||||| |||||||| |||||||    
T  32990510 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcga 32990608  T
Q  271 atcttggatcggataccgagttttc 295  Q
     |||||||||| |||| ||||||||    
T  32990609 ttcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 19660665 - 19660531
Alignment:
Q  164 gattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tc 259  Q
    ||||||| ||| ||| ||||||||||||  ||||||||||||| ||| ||||||||||||||  ||  |||| || |||||||||||||||| |||| ||    
T  19660665 gattctctctgatgcaaatttcggtgggataagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctc 19660567  T
Q  260 ggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19660566 ggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 44343570 - 44343712
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | ||||||| ||||| ||||||| ||||||||||||| ||| |||||| ||||||| ||| |  || || ||||||||||||||||    
T  44343570 tcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagctt-gctctgactttaaacggggctcccgcaagtgggcggtgggattg 44343668  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||| ||||||||| ||||| ||||||||||||||||||    
T  44343669 gtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 45787841 - 45787703
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||| |||||||||| |||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || |||| |||||||||||||||    
T  45787841 gttcgattccctctgatgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtggacggtgggattggtcc 45787743  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  45787742 cctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 46714466 - 46714591
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    |||||||||||||||||||| ||||||||||||| ||| || || |||||||| |||  |||| || ||||||||||||||||||||| |||||||||||    
T  46714466 tggtgccaatttcggtgggctaagtccatacagagctt-gcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtc 46714564  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
     | ||||| ||||||||||||||||||    
T  46714565 aattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 9517778 - 9517650
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||| ||| |||||| ||||||| |||  |||| || ||||| |||| |||||||||    
T  9517778 gttcgattctctctggtgccaatttcagtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaggtgggtggtgagattggtcc 9517680  T
Q  257 c-tcggattagtcgaatcttggatcggata 285  Q
    | ||||||||||||| ||||||||||||||    
T  9517679 cctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 55961878 - 55961753
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg-tccctcggattagtc 268  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| ||||||| ||||||||||||||||| ||| |||||||| ||    
T  55961878 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggattaatc 55961780  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
    || ||||| |||| ||||||| |||||    
T  55961779 gattcttgaatcgaataccgaattttc 55961753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 54127464 - 54127341
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||||     
T  54127464 gtgccaatttcggtgggctaagtctatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgg 54127366  T
Q  271 atcttggatcggataccgagttttc 295  Q
     ||||||| ||||||| ||||||||    
T  54127365 ttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 18875653 - 18875516
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 257  Q
    ||||||||| | ||| || |||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| ||| |||||  ||||||||| ||||    
T  18875653 gttcgattccctctgatgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccacaagtgggtagtgggattgatccc 18875555  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     ||||||||||| | | ||||||| ||||||||||||||    
T  18875554 ctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 25852274 - 25852412
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt- 254  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||  ||   || | || ||||||  ||||||||||     
T  25852274 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattggtc 25852372  T
Q  255 ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||  ||||||| |||||||||||||||    
T  25852373 ccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 35229243 - 35229365
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    ||||||||||||||||| ||||||||||| | ||| |||||| ||||||| |||   ||||||| ||| ||||||||||||||||| ||| |||||||||    
T  35229243 tgccaatttcggtgggctaagtccatacatagctt-gctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcga 35229341  T
Q  271 atcttggatcggataccgagtttt 294  Q
     |||||||||||||||||| ||||    
T  35229342 ttcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 25445359 - 25445279
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtc 255  Q
    |||||||||||| |||||||||| |||||| |||||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  25445359 tggtgccaattttggtgggcaagcccatactgaactttgct-tggctttaaatgggtcccgca-gtgggcggtgggattggtc 25445279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 32942430 - 32942562
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg--gccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||| | || ||||||||||||| ||   ||||||| |||| ||||||||||||| |    
T  32942430 gttcgattctctctgatgccaatttcggtgggctaagtccatacagagc-ttactctggctttaaacggcccccccacaagtggacggtgggattggtcc 32942528  T
Q  256 cctcggattagtcgaatcttggatcggataccga 289  Q
    |||||||| | |||| |||||||| ||| |||||    
T  32942529 cctcggataaatcgattcttggattggaaaccga 32942562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 13716583 - 13716450
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa-tgggccc-cacacgtgggcggtgggattggtcc-ctcg 260  Q
    ||||| |||| ||||||||||| |||||||||||||||| |||||||||| || |||||||  |||||| | || |||||||||||||||||||| || |    
T  13716583 gattccccctagtgccaatttcagtgggcaagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattggtcctcttg 13716484  T
Q  261 gattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||   ||||| ||||||||| |||||||    
T  13716483 gattggtcagttcttgaatcggatactgagtttt 13716450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 28791187 - 28791312
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg-tccctcggattagtcg 269  Q
    |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||| ||| | ||||| |||||||||| |||||| ||  ||| ||||||||    
T  28791187 ctggtgtcaatttcggtgggtaagtctatacaaaactttgctctggctttaaacgggtctccacaagtgggcggtgagattggttctttcgaattagtcg 28791286  T
Q  270 aatcttggatcggataccgagttttc 295  Q
       |||| |||||||| |||||||||    
T  28791287 gtccttgaatcggatatcgagttttc 28791312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 36131647 - 36131509
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||||||| | ||||||||||||| ||| ||| || ||||||| ||| ||| |  | ||||||||||||||||||||    
T  36131647 gttcgattccctatggtgccaatttcggtggcctaagtccatacagagctt-gctatgactttaaacgggacccccgtaagtgggcggtgggattggtcc 36131549  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| | || |||| ||||||||||||||    
T  36131548 cctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 13550283 - 13550404
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||||||||||||||||| |||||||||| || |||  ||||||||||||| |||  ||||||| ||||||||| |||| |||||| |||||||| ||||    
T  13550283 gtgccaatttcggtgggctaagtccataccgagctta-ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcga 13550381  T
Q  271 atcttggatcggataccgagttt 293  Q
     ||||||||||  ||||||||||    
T  13550382 ttcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 51535673 - 51535818
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-----aagtccatacagaacttt--gctctggctttaaatggg--cccca-cacgtgggcggtggga 249  Q
    ||||||||| | ||||||||||||| |||||||     ||||||||||||| |||   |||||||||||||| |||  ||||| || |||||||||||||    
T  51535673 gttcgattccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggtggga 51535772  T
Q  250 ttggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||| ||| ||||||||| |||| ||||||||||||| ||||    
T  51535773 ttggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 23639763 - 23639821
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23639763 gtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 23645421 - 23645479
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23645421 gtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 52494627 - 52494685
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  52494627 gtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 252
Target Start/End: Original strand, 10125884 - 10125973
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattg 252  Q
    ||||| |||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||  ||||||  || |||||| |||||||||    
T  10125884 gattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccctgcaagtgggcagtgggattg 10125973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 35674878 - 35674749
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | |||||||| ||||||| |||  |||| || ||||||||| ||||          
T  35674878 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctgcctttaaacggggcccccgcaagtgggcggttggat------ 35674786  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  35674785 ctcggattagtcgattctt-gatcggataccgagtttt 35674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 42281216 - 42281169
Alignment:
Q  185 cggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 232  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  42281216 cggtgggctagtccatacataactttgctctggctttaaatgggcccc 42281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 43719145 - 43719086
Alignment:
Q  237 gtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  43719145 gtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttc 43719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 1985896 - 1986031
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||| ||||||| ||||| |||||||||||||  |   ||||||||||||| ||   ||||||| ||||||||||| |||||||     
T  1985896 gttcgattccctttggtgcgaatttcgatgggctaagtccatacagag-taaactctggctttaaacggagcccccacaagtgggcggtggaattggtct 1985994  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||||||||||||| |||||||| ||||||||||||||    
T  1985995 atcggattagtcgattcttggat-ggataccgagtttt 1986031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 4064991 - 4065057
Alignment:
Q  229 ccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||| ||| ||||    
T  4064991 ccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 9978567 - 9978509
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||    
T  9978567 gtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 12500183 - 12500059
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtc 268  Q
    ||||||||||||||  ||||| ||||||||||| | ||| |||||||||||||| |||  |||| || |||||||||   |||| || ||||||||||||    
T  12500183 ctggtgccaatttcaatgggctaagtccatacatagctt-gctctggctttaaacgggacccccgcaagtgggcggtaaaattgatctctcggattagtc 12500085  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
     | ||||||| |||||||||||||||    
T  12500084 aattcttggaccggataccgagtttt 12500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 295
Target Start/End: Complemental strand, 21387603 - 21387486
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 274  Q
    |||||| ||||||| ||||| ||||||| ||| |||||||||||||| |||  |||| || ||||||||||||  ||||||| ||||||||||||| | |    
T  21387603 caattttggtgggctaagtctatacagagctt-gctctggctttaaacgggatccccgcaagtgggcggtggg--tggtcccctcggattagtcgattat 21387507  T
Q  275 tggatcggataccgagttttc 295  Q
    ||||||||||||| |||||||    
T  21387506 tggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 33992686 - 33992750
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| | | ||||||||||||||||    
T  33992686 gttcgattctctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaa 33992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 34835589 - 34835726
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtc 255  Q
    ||||||||| | |||||| |||||||||||||| |||||||||| || || || ||||||||||||| ||   |||| || ||||||| || ||||||||    
T  34835589 gttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatg-tctggctttaaatagggccccccgcaagtgggcg-tgagattggtc 34835686  T
Q  256 cc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    || ||||||||||||| |||| ||||| |||| |||||||    
T  34835687 ccctcggattagtcgattcttagatcgaatactgagtttt 34835726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 37302619 - 37302684
Alignment:
Q  230 cccacacgtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||| ||||||| |||||||||||||| |||||||||||| ||||| |||||||||||| ||||    
T  37302619 cccacaagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 13584395 - 13584253
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | |||||| |||||||| ||||| ||||||||| ||| | |||||||||||||||| |||  || ||||  || ||||||| ||||    
T  13584395 tcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagc-ttgctctggctttaaacggggccctcacaaatgagcggtggaattg 13584297  T
Q  253 gtc-cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||| ||||| ||||||||  ||||| |||| |||| ||||||||    
T  13584296 gtctcctcgaattagtcggttcttgaatcgaatactgagttttc 13584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 23131499 - 23131435
Alignment:
Q  232 cacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||| ||||||||| ||||||||||| ||| ||||||||| |||| |||||||||||||||||||    
T  23131499 cacaagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 27574427 - 27574516
Alignment:
Q  209 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| |||  |||| || |||||||||| | |||||||| |||||||| || | ||||||||||||||| ||||||||    
T  27574427 ttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttc 27574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 30879290 - 30879165
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tgggccccacacgtgggcggtgggattgg-tccctcggattagtc 268  Q
    ||||||||||||||| ||||  || |||||||| || |||||||||||||||||  ||| ||  || |||| |||||||||||| |||||| ||||| ||    
T  30879290 ctggtgccaatttcgatgggttaaatccataca-aagtttgctctggctttaaagggggtcctgcaagtggacggtgggattggttccctcagattaatc 30879192  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
    || ||||||||| |||||||| |||||    
T  30879191 gattcttggatcagataccgaattttc 30879165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 55158413 - 55158343
Alignment:
Q  225 tgggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||| ||  |||| ||||||||||||||| ||||||||||||| | |||||||||| ||||||||||    
T  55158413 tgggccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 293
Target Start/End: Original strand, 24273282 - 24273418
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccc 257  Q
    |||||||| || ||||||| || |||||||||||| |||||||| ||||||||| | | |||||||||| | | | |  ||||| ||| |||||| ||||    
T  24273282 gttcgattttctctggtgctaagttcggtgggcaaatccatacaaaactttgctatagttttaaatggggctctcgcaagtgggtggtaggattgatccc 24273381  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttt 293  Q
     || |||||||||   |||||||| ||||||||||||    
T  24273382 atcagattagtcggtccttggatcagataccgagttt 24273418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 20527174 - 20527035
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaat-gggccccacacgtgggcggtgggattgg 253  Q
    ||||||| ||||| | |||| |||||||||||||||| ||||||||| ||| ||| | | | | ||||||  |||||||  | ||||||||| |||||||    
T  20527174 tcaagtttgattccctctggcgccaatttcggtgggctaagtccatatagagctt-gatttcggtttaaacagggccccgtaagtgggcggtaggattgg 20527076  T
Q  254 tc-cctcggattagtcgaatcttggatcggataccgagttt 293  Q
    || ||||||||||||||| | |||||||  |||||||||||    
T  20527075 tctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 22630323 - 22630263
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| |  |||||| ||||||    
T  22630323 gttcgattccctctggtgccaattttggtgggcaagtccatacaaagttttgctttggctt 22630263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 37455637 - 37455704
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||| ||||||||||||||||  ||||| | |||||| |||  |||||||||||||||||||||    
T  37455637 gttcgattc-ccctggtgccaatttcaatgggctaatccatatagagatttgctctggctttaaatggg 37455704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 41085086 - 41085222
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcc-ccacacgtgggcggtgggattggtcc-c 257  Q
    ||||||||||| ||| |||| |||||| ||| |||||||||| ||| ||||||||| ||||||| || ||| |  |  |||| ||||||||||||||| |    
T  41085086 gttcgattctctctgatgccgatttcgatggacaagtccatatagagctttgctctagctttaagtgagccactgctagtggacggtgggattggtcctc 41085185  T
Q  258 tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||| |||||| || ||||| || || ||| |||||||    
T  41085186 tcgaattagtggattcttgtataggctactgagtttt 41085222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 33289212 - 33289251
Alignment:
Q  255 ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  33289212 ccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 51595094 - 51595219
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagt 267  Q
    ||||||||||||||| ||| | || || ||| ||||||| |||||| ||||||| |||  |||| || |||| |||||| |||| || || ||||||| |    
T  51595094 ctggtgccaatttcgatggactaaatcaatagagaactt-gctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaat 51595192  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    ||| |||||||||||||||||||||||    
T  51595193 cgattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 7093510 - 7093568
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||||||||| ||| ||||||||   ||||||||||||| ||||||||    
T  7093510 gtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 12824539 - 12824597
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||| | ||| ||||||||| ||||||||||||||| |||||||    
T  12824539 gtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagtttt 12824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 17637909 - 17637852
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||  ||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  17637909 gtgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagtttt 17637852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 12710258 - 12710299
Alignment:
Q  179 caatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  12710258 caatttcggtggacaagtccatacagtgctttgctctggctt 12710299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 39288938 - 39288978
Alignment:
Q  179 caatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  39288938 caatttcggtgggcaagtccatacagagc-ttgctctggctt 39288978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 41621721 - 41621680
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgct 213  Q
    ||||||||||||| ||||||||| |||||||||| |||||||    
T  41621721 ctggtgccaattttggtgggcaaatccatacagagctttgct 41621680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 8442101 - 8442049
Alignment:
Q  244 gtgggattggtc-cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||| |||||    
T  8442101 gtgggattggtctcctcggattagtcgattcctagatcggataccgaattttc 8442049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 24672337 - 24672305
Alignment:
Q  262 attagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||| |||||||||||||||||||||||    
T  24672337 attagtcgattcttggatcggataccgagtttt 24672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 4718709 - 4718847
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  4718709 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 4718807  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  4718808 cctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 34237792 - 34237654
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||| ||||||||||||||||    
T  34237792 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgagcggtgggattggtcc 34237694  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34237693 cctcggattagtcgattcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 6953144 - 6953008
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || || |||||||||||||||||    
T  6953144 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagttggcggtgggattggtcc 6953046  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6953045 ctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 160 - 293
Target Start/End: Original strand, 28193538 - 28193674
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc--acacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||  ||||||||||||| ||| |||||||||||||| ||| |||  ||| ||||||||||||||||||||    
T  28193538 gttcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctacaagtgggcggtgggattggtcc 28193636  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    | ||||||||||||| ||||||||||||||||||||||    
T  28193637 cctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 18128578 - 18128714
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-c 257  Q
    |||||||||| ||||||||||||||||||||| | |||||| ||| |||||||||||||||||| |||  |||| || |||||||||||||||||||| |    
T  18128578 ttcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctc 18128677  T
Q  258 tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    || |||||||||  |||||||||| ||||||||||||    
T  18128678 tcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 3734760 - 3734622
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  ||||| |||||||||||||    
T  3734760 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcagtgggattggtcc 3734662  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  3734661 cctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 8765663 - 8765525
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||||||||||||||||||    
T  8765663 gttcgattccctctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 8765565  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  8765564 cctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 39349320 - 39349458
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||| |||    
T  39349320 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 39349418  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||||||||||||||| |||||||    
T  39349419 cctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 21603294 - 21603431
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||||||||| ||| ||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21603294 gttcgattccctatggtgccaatttcggtgggctaagcccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21603392  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  21603393 cctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 2618250 - 2618388
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| ||   |||| || ||||||||||||||||||||    
T  2618250 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattggtcc 2618348  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||| ||||||||||    
T  2618349 cctcggattagtcgattcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 32879343 - 32879481
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| |||| |||||||| ||| |||||| | ||||| |||  ||||||| ||||||||||||||||||||    
T  32879343 gttcgattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctgacattaaacggggcccccacaagtgggcggtgggattggtcc 32879441  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||||||| |||||||||||||||    
T  32879442 cctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 20305984 - 20306110
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||| ||||||    
T  20305984 ctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagt 20306082  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    |||  |||||||||||||||||||||||    
T  20306083 cgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 21092617 - 21092743
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| ||| ||||||    
T  21092617 ctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagt 21092715  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    |||  |||||||||||||||||||||||    
T  21092716 cgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 42328084 - 42328206
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaa 271  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| |||| || ||||||||||||| ||| |||||||||     
T  42328084 tgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgat 42328182  T
Q  272 tcttggatcggataccgagttttc 295  Q
    ||||||||||||||||||||||||    
T  42328183 tcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 160 - 293
Target Start/End: Complemental strand, 15259543 - 15259407
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||  ||||||||    
T  15259543 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcc 15259445  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    | ||| ||||||||| ||||||||||||| ||||||||    
T  15259444 cctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 21239409 - 21239503
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggat 250  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  21239409 tcaagtttgattttccctggtgccaatttcggtgggcatgtccatataaaactttgctttggctttaaatgggccccacaagtggacggtaggat 21239503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 14633018 - 14633156
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||| || ||  |  ||||| ||||||||||||||||||||    
T  14633018 gttcgattccctctggtgccaatttcggtgggctaagtctatacagagctt-gctctggctttgaacggagcgtccacaagtgggcggtgggattggtcc 14633116  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | | ||||||||||| |||||||||||||||| |||||||    
T  14633117 ccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 2639500 - 2639410
Alignment:
Q  208 tttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 161 - 294
Target Start/End: Complemental strand, 42643254 - 42643118
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 257  Q
    |||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||| ||| ||| |||  |||| || |||||||||||||||||||||    
T  42643254 ttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtccc 42643156  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||| |||||| || |||||||||||||||||||||||    
T  42643155 ctcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 4698860 - 4698722
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||||||||||| ||||||||  ||||||| |||||||||||||| ||   |||| || ||| ||||||||||||||||    
T  4698860 gttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaactt-gctctggctttaaacggagcccccgcaagtgagcggtgggattggtcc 4698762  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| || ||||| |||||||||||||||    
T  4698761 cctcggattagtcgattcatggattggataccgagttttc 4698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 3403627 - 3403502
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac--acgtgggcggtgggattggt-ccctcggattagtc 268  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| |  | |||||||||| | ||||| |||||| |||||||    
T  3403627 ctggtgccaatttcggtgggcaagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggtgaggttggtcccctcgaattagtc 3403528  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
     | |||| || | |||||||||||||    
T  3403527 aattcttagaccagataccgagtttt 3403502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 19471685 - 19471812
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 266  Q
    ||||||||||||| |||| || ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||| |||||    
T  19471685 ctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattag 19471783  T
Q  267 tcgaatcttggatcggataccgagttttc 295  Q
    ||||  |||||||||||||||||||||||    
T  19471784 tcgatacttggatcggataccgagttttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 19542609 - 19542736
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 266  Q
    ||||||||||||| |||| || ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||| |||||    
T  19542609 ctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattag 19542707  T
Q  267 tcgaatcttggatcggataccgagttttc 295  Q
    ||||  |||||||||||||||||||||||    
T  19542708 tcgatacttggatcggataccgagttttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 19590087 - 19589960
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattag 266  Q
    ||||||||||||| |||| || ||||||||||||| ||| |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||| |||||    
T  19590087 ctggtgccaattttggtgagctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattag 19589989  T
Q  267 tcgaatcttggatcggataccgagttttc 295  Q
    ||||  |||||||||||||||||||||||    
T  19589988 tcgatacttggatcggataccgagttttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 20469981 - 20470117
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || | |||||||| | ||||| ||||||||||||| ||| ||||||||||||||  |   |||| || |||||||||||||||||| |    
T  20469981 gttcgattccctctagagccaatttagatgggctaagtccatacagagctt-gctctggctttaaacagagcccccgcaagtgggcggtgggattggttc 20470079  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||| | |||||||||||||||||||||    
T  20470080 ctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 264536 - 264400
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 257  Q
    ||||||||| | || |||||||||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||| |||  ||||||||| ||||| ||||    
T  264536 gttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatccc 264438  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||| ||||||||| |||||||||||||||||| ||||    
T  264437 ctcgaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 651385 - 651521
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 257  Q
    ||||||||| | || |||||||||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||| |||  ||||||||| ||||| ||||    
T  651385 gttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatccc 651483  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||| ||||||||| |||||||||||||||||| ||||    
T  651484 ctcgaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 837120 - 837256
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc 257  Q
    ||||||||| | || |||||||||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||| |||  ||||||||| ||||| ||||    
T  837120 gttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatccc 837218  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||| ||||||||| |||||||||||||||||| ||||    
T  837219 ctcgaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 10292167 - 10292255
Alignment:
Q  209 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||    
T  10292167 ttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 25248413 - 25248547
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggt-cc 256  Q
    ||||||||| | |||||| |||||||||| ||| ||||| |||||||  ||||||||||||||||| |||||| | || |||||||||||||||||| ||    
T  25248413 gttcgattccctctggtgtcaatttcggtaggctaagtc-atacagag-tttgctctggctttaaacgggccctcgcaagtgggcggtgggattggtccc 25248510  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||| || || ||||||||||||||||||    
T  25248511 ctcggattagtcg-atttttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 12312906 - 12313046
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt 254  Q
    ||||||||||||  | ||||||||||||| | |||||||| ||| ||| | ||||| | |||||||||||||| ||||||| |||||||||||||||| |    
T  12312906 tcaagttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttgatttggctttaaatgggcccccacaagtgggcggtgggattgat 12313005  T
Q  255 -ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
     |||||| ||||||||  |||| || |||| ||||||||||    
T  12313006 cccctcgaattagtcggttcttagagcggaaaccgagtttt 12313046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 34610824 - 34610686
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| | ||| ||||||||||||||| | ||||| ||||||| ||| |||||||||||||| | ||||| | |  ||||||||| | ||||||||    
T  34610824 gttcgattccctctgatgccaatttcggtggtctaagtctatacagagctt-gctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcc 34610726  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  34610725 cctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 27746472 - 27746334
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtggg-cggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||||||| ||||| || ||| ||| ||||    
T  27746472 gttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaaggggccccacaagtggggcgatggaattagtcc 27746374  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||||||||| ||| ||| |||||    
T  27746373 cctcggattagtcgattcttggatcgaatatcgatttttc 27746334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 2166770 - 2166897
Alignment:
Q  169 tccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-ccctcggatta 265  Q
    ||||| ||||||||||| || ||| ||||||||||||| ||| |||||||||||||||  | |||| || |||||||||||||||||| ||||| |||||    
T  2166770 tccctcgtgccaatttcagtaggctaagtccatacagagctt-gctctggctttaaataagaccccgcaagtgggcggtgggattggtcccctcagatta 2166868  T
Q  266 gtcgaatcttggatcggataccgagtttt 294  Q
    ||||| | || ||| ||||||||||||||    
T  2166869 gtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 20505629 - 20505715
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat-gggccccacacgtgggcggtgggattggtccc 257  Q
    |||||||||||||| | ||||||||||||||| | ||||| | ||||||||||| |||| || || |||||||||||||||||||||    
T  20505629 ctggtgccaatttcagcgggcaagtccatacaaagctttgttttggctttaaatagggcaccgcaagtgggcggtgggattggtccc 20505715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 36848874 - 36848757
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatg-ggccccacacgtgggcggtgggattggt-ccctcggattagtc 268  Q
    ||||||||||||||||||||| |||||||||| | | ||||||| ||||||||||| ||| ||||| ||||||||||||||| || |||||  |||||||    
T  36848874 ctggtgccaatttcggtgggctaagtccatac-ggagtttgctcgggctttaaatgaggcaccacaagtgggcggtgggattagtcccctcaaattagtc 36848776  T
Q  269 gaatcttggatcggatacc 287  Q
    |  | ||||||||||||||    
T  36848775 ggtttttggatcggatacc 36848757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 1219432 - 1219551
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagtcgaatct 274  Q
    ||||||| |||||| |||||||||||||| |||| |||||||||||| |||  ||||| | ||||||||| |||| ||||||| |||||||||||| |||    
T  1219432 caatttcagtgggctaagtccatacagaa-tttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattct 1219530  T
Q  275 tggatcggataccgagttttc 295  Q
    | ||||| ||||||| |||||    
T  1219531 tagatcgaataccgaattttc 1219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 26168974 - 26168856
Alignment:
Q  171 cctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggt-ccctcggattagt 267  Q
    |||| ||||||||||||||||||||| |||||||| | ||| |||||||||||||| ||||  | || ||||| | || ||||||| |||||||| ||||    
T  26168974 cctgatgccaatttcggtgggcaagttcatacagagc-ttgttctggctttaaatgagcccctcgcaagtgggggatgagattggtcccctcggagtagt 26168876  T
Q  268 cgaatcttggatcggatacc 287  Q
    ||| |||||||||| |||||    
T  26168875 cgattcttggatcgaatacc 26168856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 28964109 - 28964234
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagt 267  Q
    ||||||||||||||||||||| |||||||||| || || || |||||||||||| |||  |||| || |||||| ||||||||||| |||||| ||||||    
T  28964109 ctggtgccaatttcggtgggctaagtccatacggagctatg-tctggctttaaacggggcccccgcaagtgggc-gtgggattggtcccctcgaattagt 28964206  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| |||| ||||| |||| ||||||||    
T  28964207 cgattcttagatcgaatactgagttttc 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 34639332 - 34639284
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  34639332 ctggtgccaatttcggtgggtaagtccatacagagctttgctctggctt 34639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 24018465 - 24018585
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt-ccctcggattagtcgaatc 273  Q
    ||||||| |||||| ||||||||||||| ||| |||||||||||||| |||   ||||||| |||||||||| ||||||| |||| | ||||||||  ||    
T  24018465 caatttcagtgggctaagtccatacagagctt-gctctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttc 24018563  T
Q  274 ttggatcggataccgagttttc 295  Q
    ||||| |||||| |||||||||    
T  24018564 ttggaccggatatcgagttttc 24018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 28088363 - 28088478
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    ||||| |||||||||||||  ||||||||||||| ||| |||||| ||||||||||| ||  | || |||||||||||||||| |||| || || |||||    
T  28088363 tggtgtcaatttcggtgggttaagtccatacagagctt-gctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtc 28088461  T
Q  269 gaatcttggatcggata 285  Q
    || ||||||||||||||    
T  28088462 gattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 18532190 - 18532300
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtccctcggattagtcgaatctt 275  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||||| ||| |||   || |||||||||| ||||||        ||||||||| ||||    
T  18532190 caatttcggtgggctaagtccatacagaactt-gctctggatttaaacggggcccctgcaagtgggcggtgagattgg--------attagtcgattctt 18532280  T
Q  276 ggatcggataccgagttttc 295  Q
    ||||||||||||||||||||    
T  18532281 ggatcggataccgagttttc 18532300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  249 attggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 30482605 - 30482683
Alignment:
Q  163 cgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtggg 241  Q
    |||||||| ||| || ||| || |||||| || |||||||||||||| |||||| ||||||| |||||||||| |||||    
T  30482605 cgattctctctgatgtcaaatttggtgggtaaatccatacagaacttggctctgtctttaaacgggccccacaagtggg 30482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 8387585 - 8387536
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacaga 205  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||    
T  8387585 tcaagttcgatttcctctggtgccaattttggtgggcaagtccatacaga 8387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 8042724 - 8042844
Alignment:
Q  173 tggtgccaatttcggtgggcaa-gtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccctcggattagtcgaa 271  Q
    |||||||||||| ||||||| | |||||||||||  ||||||  |||||| ||||| |||| ||  ||  ||||||||||||||||| | |||| |||      
T  8042724 tggtgccaattttggtgggctatgtccatacagag-tttgct--ggcttttaatggtccccgcaaatgaacggtgggattggtcccttgaattaatcggt 8042820  T
Q  272 tcttggatcggataccgagttttc 295  Q
    ||||||||||||||| ||||||||    
T  8042821 tcttggatcggatactgagttttc 8042844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 13749133 - 13749231
Alignment:
Q  174 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt-ccctcggattagtc 268  Q
    ||||||||||| ||||||||||| |||||| | ||||||||||||||  || |||   |||| || |||||| |||| |||||| ||||||||||||||    
T  13749133 ggtgccaattttggtgggcaagttcatacaaagctttgctctggcttagaacggggccccccgcaagtgggcagtggaattggtcccctcggattagtc 13749231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 28908899 - 28908951
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 224  Q
    |||||| ||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  28908899 ctggtgtcaattacagtgggcaagtccatacagagctttgttctggctttaaa 28908951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 41070821 - 41070885
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    ||||||||||||| |  ||||| |||||||||||||||||| |||||| | |||| |||||||||    
T  41070821 tcaagttcgattccctttggtgtcaatttcggtgggcaagttcatacatagctttactctggctt 41070885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 33747025 - 33747084
Alignment:
Q  237 gtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||| |||||| |||||| | ||||||||||||||  |||||||||||||||||||||||    
T  33747025 gtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttttc 33747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 7558034 - 7557952
Alignment:
Q  213 tctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    |||||||||||| || ||||  || |||| |||||||||||||||| ||| ||||||||| | ||| ||||||||||||||||    
T  7558034 tctggctttaaacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 34694701 - 34694574
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg---gccccacacgtgggcggtgggattggt-ccctcggattagt 267  Q
    ||||||||||||||||||||||| | |||||| | |||||||| |||||  || ||    |||| |  |||| ||||||||||||| ||||| |||||||    
T  34694701 ctggtgccaatttcggtgggcaaattcatacaaagctttgctccggcttagaacggaatccccctctagtggacggtgggattggtcccctcagattagt 34694602  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    |    ||||||||||||| |||||||||    
T  34694601 ctgtccttggatcggataacgagttttc 34694574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 34778798 - 34778847
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacaga 205  Q
    ||||||| |||| |||  ||||||||||||||||||| ||||||||||||    
T  34778798 tcaagtttgattttccacggtgccaatttcggtgggctagtccatacaga 34778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 38964141 - 38964190
Alignment:
Q  176 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat 225  Q
    |||||||||  |||||| ||| |||||||||||||||||| |||||||||    
T  38964141 tgccaatttttgtgggctagttcatacagaactttgctctagctttaaat 38964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 263 - 295
Target Start/End: Complemental strand, 10544956 - 10544924
Alignment:
Q  263 ttagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||| ||||||||||||||||||||||||    
T  10544956 ttagtcgattcttggatcggataccgagttttc 10544924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 13580040 - 13579980
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    ||||||||||| ||||||||||||| | || |||||| ||||| || ||||||||| ||||    
T  13580040 gttcgattctctctggtgccaattttgttgagcaagttcataccgagctttgctctagctt 13579980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 33534618 - 33534566
Alignment:
Q  244 gtgggattggtccct-cggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| |||||||||||   |||||||||| ||||||||||||    
T  33534618 gtgggattggtcccttcggattagtcggtccttggatcggttaccgagttttc 33534566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 22119952 - 22120090
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  22119952 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 22120050  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  22120051 cctcggattagtcgattcttggatcggataccgagttttc 22120090  T

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Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 40543047 - 40542909
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  40543047 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 40542949  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  40542948 cctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 654841 - 654704
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc 257  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||  || |||||||||||||||||||||    
T  654841 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattggtccc 654743  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     ||||||||||||  ||||||||||||||||||||||||    
T  654742 ctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 2751335 - 2751473
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  |||||||||||||||||||    
T  2751335 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 2751433  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  2751434 cctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 21835215 - 21835353
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21835215 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21835313  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||||||||||||| |||||||||    
T  21835314 cctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 2103119 - 2103255
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  |||| || ||||||||||||||||||||    
T  2103119 gttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgggattggtcc 2103217  T
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||| || | |||||||||||||||||||    
T  2103218 ctcggattagtcgattcat-gatcggataccgagttttc 2103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 7275341 - 7275478
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || ||||||||||||||||||||    
T  7275341 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 7275439  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  7275440 cctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 17197091 - 17196950
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | |||||||||||||||||| || ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||    
T  17197091 tcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 17196993  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  17196992 gtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 7175999 - 7175861
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || ||||||||||||||||||||    
T  7175999 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacaggacccccgcaagtgggcggtgggattggtcc 7175901  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||| ||||||||    
T  7175900 cctcggattagtcgattcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 29861734 - 29861872
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||  |||| || |||||||||||||||| |||    
T  29861734 gttcgattccctctggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 29861832  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||| ||||||||| |||| |||||||||||||||||||    
T  29861833 cctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 41907650 - 41907514
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa--tgggccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||  || ||||||||||||||  ||| |||| || ||||| ||||||||||||||    
T  41907650 gttcgattctctctggtgccaatttcagtgggctaagtccatacagaggtt-gctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcc 41907552  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | | |||||||||| |||||||||||||||||||||||    
T  41907551 cccagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 21217970 - 21217832
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| | ||| ||||||||||||||||| ||||||||||||| ||| ||||| |||||||| ||||||| |||  |||||||||||||||| |||    
T  21217970 gttcgattccctctgatgccaatttcggtgggctaagtccatacagagctt-gctctagctttaaacgggccccccacaagtgggcggtgggattgatcc 21217872  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | |||||||||| || ||||||||||||||||||||||||    
T  21217871 cctcggattagttgattcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 11997913 - 11998051
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa-tgggcccca-cacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||| ||||||||  || ||||||||||||||||||||    
T  11997913 gttcgattccctctggtgccaatttcggttggctaagtccatacatagctt-gctctggctttaaactgggcccccgcaagtgggcggtgggattggtcc 11998011  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  11998012 cctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 16374059 - 16374196
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 257  Q
    |||||||| | ||||||||||||||||||||  |||||||||||||| |||||| |||||||||| |||  |||| ||  ||| ||||||||||||||||    
T  16374059 ttcgattccctctggtgccaatttcggtgggttaagtccatacagaa-tttgctatggctttaaacgggacccccgcaaatggacggtgggattggtccc 16374157  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  16374158 ctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 18044171 - 18044308
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || |||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  ||||||| ||||| ||||| ||||||||    
T  18044171 gttcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggtggtggaattggtcc 18044269  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | || |||||||||| |||||||||||||||||||||||    
T  18044270 cctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 23012630 - 23012507
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcga 270  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||||| |||||||||||||||||| |||||| ||||||| |    
T  23012630 gtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaa 23012532  T
Q  271 atcttggatcggataccgagttttc 295  Q
     || | |||||||||||||||||||    
T  23012531 ttcattgatcggataccgagttttc 23012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 10091252 - 10091389
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||  |||| || |||||||||||||||| | |    
T  10091252 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcc 10091350  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| |||| |||| ||||||||||||||    
T  10091351 cctcggattagtcgattctt-gatccgataccgagttttc 10091389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 22703550 - 22703688
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||| | ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  22703550 gttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcc 22703648  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||| ||||||||||| |||||||    
T  22703649 cctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 23092172 - 23092298
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  ||| |||||||||||||||| ||||||||||    
T  23092172 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagt 23092270  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| || |||||||||||||||||||||    
T  23092271 cgattcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 28647033 - 28647170
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tcc 256  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||  |||||||||||||  || |||  ||||||| ||||||||||||||||| |||    
T  28647033 gttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattggttcc 28647132  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||    ||||||||||||| ||||||||    
T  28647133 ctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 3851840 - 3851958
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 274  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||||||| |||  |||| || |||||||||||||||| |||| ||||||||||||| |||    
T  3851840 caatttcggtgggctaagtccatatagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattct 3851938  T
Q  275 tggatcggataccgagtttt 294  Q
    ||||||||||||||||||||    
T  3851939 tggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 28089892 - 28090021
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacaga---actttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggatta 265  Q
    |||||| |||||||||||||| ||||||||||| |   |  ||||||||||||||||||||||||  || ||||||| || |||||||||| ||||||||    
T  28089892 ctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggatta 28089991  T
Q  266 gtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||||||||||||||||||||||||    
T  28089992 gtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 19421307 - 19421431
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtc-cctcggattagt 267  Q
    |||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||||||||| |  ||||| ||||||||||||||||||| ||||||||||||    
T  19421307 ctggtgtcaatttcgatgggctaagtccatacagagctt-gctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagt 19421405  T
Q  268 cgaatcttggatcggataccgagttt 293  Q
    ||| ||||| ||| ||||||||||||    
T  19421406 cgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 21574226 - 21574101
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcg 269  Q
    ||||||||| ||||||||||||||||||||||| |||||| | |||||  || |||  ||||||| || ||||||| ||||||| |||||||||||||||    
T  21574226 tggtgccaacttcggtgggcaagtccatacagagctttgcccaggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcg 21574127  T
Q  270 aatcttggatcggataccgagttttc 295  Q
       |||||||||||||||||||||||    
T  21574126 gtccttggatcggataccgagttttc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 174 - 295
Target Start/End: Complemental strand, 23330862 - 23330738
Alignment:
Q  174 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcga 270  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||  | || || |||||||||  ||||||| |||||  ||||||| |    
T  23330862 ggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggtaagattggtcccctcaaattagtcaa 23330763  T
Q  271 atcttggatcggataccgagttttc 295  Q
      |||||||||||||||||||||||    
T  23330762 tccttggatcggataccgagttttc 23330738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 1766284 - 1766149
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggt 254  Q
    ||||||||||||| |  | ||| ||||||||||||| ||||||||||||||||||||  ||||||  ||  |||||||||| ||||||||| ||||||||    
T  1766284 tcaagttcgattcccttttgtgtcaatttcggtgggtaagtccatacagaactttgccttggcttagaacggggccccacaagtgggcggttggattggt 1766185  T
Q  255 -ccctcggattagtcgaatcttggatcggataccga 289  Q
     |||||||||||||||   |||| ||||||||||||    
T  1766184 cccctcggattagtcggtacttgaatcggataccga 1766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 42913637 - 42913512
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    |||||||||||||| ||||  |||||||||| |||||| |||||||||||||| |||  |||| || |||| |||||||||||||||| ||||||||||     
T  42913637 tggtgccaatttcgatgggataagtccatacggaactt-gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtt 42913539  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
    || |||| |||||||||||||||||||    
T  42913538 gattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 31273974 - 31274115
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc-ccacacgtgggcggtgggattgg 253  Q
    ||||||||||||| | |||| || |||||||| |||| ||||||||||||| ||| |||||||||||||| ||| | || || |||||| ||| ||||||    
T  31273974 tcaagttcgattccctctggagctaatttcggcgggctaagtccatacagagctt-gctctggctttaaacggggctccgcaagtgggcagtgagattgg 31274072  T
Q  254 tccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||| ||| ||||||||| ||||||| ||||||||||||||||    
T  31274073 tcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 2344375 - 2344501
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||| ||||||| ||||||||||||| ||||  | |||||||||| |||  |||| || ||| ||||||||||||||||| ||||||||||    
T  2344375 ctggtgccaattttggtgggctaagtccatacagagctttttt-tggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagt 2344473  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||   |||||||||||||||||||||||    
T  2344474 cggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 7262277 - 7262416
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt 254  Q
    ||||||| |||||||| || ||||||||||| ||| ||| |||||| ||| |||| ||||||||||||||||| ||||||| || |  ||||||||||||    
T  7262277 tcaagtttgattctccatgatgccaatttcgatggacaaatccatatagagctttactctggctttaaatgggtccccacaagt-gatggtgggattggt 7262375  T
Q  255 -ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
     |||||| ||||||||   |||| |||||||||||||||||    
T  7262376 cccctcgaattagtcggcccttgaatcggataccgagtttt 7262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 31712960 - 31712902
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31712960 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 287
Target Start/End: Original strand, 17212117 - 17212247
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtcc 256  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||  || |||||||||| ||| ||| |||   || ||| | ||||||||||||||    
T  17212117 gttcaattctctctggtgccaatttcggtgggctaagtccatacagagatt-gctctggcttaaaacgggacccctgcaagtgagtggtgggattggtcc 17212215  T
Q  257 c-tcggattagtcgaatcttggatcggatacc 287  Q
    | ||||||||||||| ||||||||| ||||||    
T  17212216 cctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 27312216 - 27312354
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || |||||||||||| || || ||||||||||||| ||   ||||| ||||||| ||   |||| || ||||||||||||||||||||    
T  27312216 gttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctac-ctctgactttaaacggagcccccgcaagtgggcggtgggattggtcc 27312314  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | || |||||||||| ||||||||||||||||||||||||    
T  27312315 cctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 32849704 - 32849791
Alignment:
Q  209 ttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    |||||||||||||||||||| |  ||| | |||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  32849704 ttgctctggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 9683905 - 9684026
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||||||||||||||||| |||||||||| || |||  ||||||||||||| |||  ||||||| ||||||||| |||| |||||| |||||||| ||||    
T  9683905 gtgccaatttcggtgggctaagtccataccgagctta-ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcga 9684003  T
Q  271 atcttggatcggataccgagttt 293  Q
     ||||||||||  ||||||||||    
T  9684004 ttcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 36772424 - 36772303
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacg--tgggcggtgggattggtcc-ctcggattagtcgaa 271  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||||||| ||| ||| |  |  |||||||||| ||| |||| ||||||||||||||     
T  36772424 tgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgat 36772326  T
Q  272 tcttggatcggataccgagtttt 294  Q
    |||| ||||||||||||||||||    
T  36772325 tctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 31197688 - 31197792
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccga 289  Q
    ||||||||||||| ||| ||||| |||||||| |||  |||| || |||| |||||||||||||||| || |||||||||| |||||||||||||| |||    
T  31197688 aagtccatacagatctt-gctcttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcga 31197786  T
Q  290 gttttc 295  Q
    ||||||    
T  31197787 gttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 39145789 - 39145652
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccat-acagaactttgctctggctttaaatgggcccc-acacgtgggcggtgggattggt-c 255  Q
    ||||||||| |  |||||||||||||||||||| ||||| || ||||| | |||||||||||||||| |||||||  || |||| ||||||||||||| |    
T  39145789 gttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagc-ttgctctggctttaaacgggcccctgcaagtggacggtgggattggtcc 39145691  T
Q  256 cctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||| ||||||||| ||||| ||| |||||| ||||||    
T  39145690 cctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 27009435 - 27009561
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac---gtgggcggtgggattggtccc-tcggattag 266  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| |||   |   |||| |||||||||||||||| ||  |||||    
T  27009435 ctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattag 27009533  T
Q  267 tcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||| ||||||||||||||    
T  27009534 tcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 22638401 - 22638488
Alignment:
Q  209 ttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtc-cctcggattagtcgaatcttggatcggataccgagttt 293  Q
    |||||||||||||||| ||| ||  | || |||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||    
T  22638401 ttgctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 173 - 294
Target Start/End: Original strand, 27704079 - 27704202
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcg 269  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||| ||||||||||||| ||||  || ||||| |||| ||||| |||| || |||||||||    
T  27704079 tggtgccaatttcggtgggctaagtccatagagagctt-gctttggctttaaatggacccccgcaagtgggtggtgtgattgatcccctcagattagtcg 27704177  T
Q  270 aatcttggatcggataccgagtttt 294  Q
    | ||||| ||| |||||||||||||    
T  27704178 attcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 8435820 - 8435741
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggatt 251  Q
    |||||||||||||||||||||||||||||||| | ||||| | |||||||||  || |||| || |||||| ||||||||    
T  8435820 ctggtgccaatttcggtgggcaagtccatacaaagctttgttttggctttaatgggcccccgcaagtgggcagtgggatt 8435741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 28950947 - 28951072
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||||||||||||||||||| |||| |||| ||| ||| |||||||||||||| ||| ||| | |  || |||||||||||||||||| ||| | |||     
T  28950947 ctggtgccaatttcggtgggctaagttcatatagagctt-gctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactaga 28951045  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    | | |||||||||||||||||||||||    
T  28951046 caattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 23636687 - 23636590
Alignment:
Q  175 gtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-cctcggattagtcg 269  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||||||||||  || |||| || | |||||||||||| |  |||||||||||||    
T  23636687 gtgccaatttcggtgggttagtccatatagagctttgctctggctttaaatggggccctcacaagtagacggtgggattggacttctcggattagtcg 23636590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 22696396 - 22696522
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggcccca---cacgtgggcggtgggattggtcc-ctcggattag 266  Q
    |||||||||||||||||||| |  |||||||||| ||||||||||||||  || | ||||||    || || ||||| ||||||||||| ||||||||||    
T  22696396 ctggtgccaatttcggtggggac-tccatacagagctttgctctggcttagaacgaggcccccgcgcaagtaggcggcgggattggtcctctcggattag 22696494  T
Q  267 tcgaatcttggatcggataccgagtttt 294  Q
    |||   ||||||||||||||||||||||    
T  22696495 tcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 9718128 - 9717986
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | |||||| |||||||| ||||| ||||||||| ||| | |||||||||||||||| |||  || ||||  || ||||||| ||||    
T  9718128 tcaagttcgattccctctggtgtcaatttcgatgggctaagtccatagagagc-ttgctctggctttaaacggggccctcacaaatgagcggtggaattg 9718030  T
Q  253 gtc-cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||| ||||| ||||||||  ||||| |||| |||| ||||||||    
T  9718029 gtctcctcgaattagtcggttcttgaatcgaatactgagttttc 9717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 35476405 - 35476465
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt 220  Q
    |||||||||||  |||||||||||| |||||| |||| |||||||| ||||||||||||||    
T  35476405 gttcgattctctttggtgccaattttggtgggtaagttcatacagagctttgctctggctt 35476465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 25333546 - 25333603
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  25333546 gtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 13332557 - 13332433
Alignment:
Q  163 cgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccctcgg 261  Q
    |||||| | |||| |||||||||||||||| ||||||||||||| |||  |||||||||||||  |||||| || |||| ||||         | |||||    
T  13332557 cgattccctctggagccaatttcggtgggctaagtccatacagagctta-ctctggctttaaacaggccccgcaagtggccggtc--------cactcgg 13332467  T
Q  262 attagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||| ||||||||| ||||||||||||||    
T  13332466 attagtcgattcttggatcagataccgagttttc 13332433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 21373789 - 21373887
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcga 270  Q
    |||||||||||||||||| ||||| ||||||| | |||||||||||||||| |||  |||| || |||| ||||| ||||||||| | ||||||||||||    
T  21373789 gtgccaatttcggtgggctaagtctatacagagc-ttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcga 21373887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 28136288 - 28136252
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc 192  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28136288 tcaagttagattctccctggtgccaatttcggtgggc 28136252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 36173099 - 36173171
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 232  Q
    ||||||||| | || |||||||||| |||||||||||||||||||| ||  ||||| | || |||||||||||    
T  36173099 gttcgattccctcttgtgccaattttggtgggcaagtccatacagagctaagctcttgtttaaaatgggcccc 36173171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 43785440 - 43785298
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattg 252  Q
    ||||||||||||| | || |||| |||||| |||| | ||||||||||||| |||  |||||| |||||| ||| ||  | || |||| ||||| |||||    
T  43785440 tcaagttcgattcccacttgtgctaatttcagtggactaagtccatacagagctta-ctctggttttaaacggggcctccgcaagtggacggtgagattg 43785342  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| | ||||||||||| | ||||||||||||||||| ||||    
T  43785341 gtccccttggattagtcgatttttggatcggataccgagctttc 43785298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 47380962 - 47381005
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccataca 203  Q
    ||||||||||| || ||||||||||||||| |||||||||||||    
T  47380962 gttcgattctcacttgtgccaatttcggtgtgcaagtccataca 47381005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 48199383 - 48199470
Alignment:
Q  208 tttgctctggctttaaatgggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||| ||||||||||| |||||| ||||| ||||| ||||| || ||| |||||||||| ||||  ||||||||  |||||||    
T  48199383 tttgctctgactttaaatgggtcccacaagtgggtggtggaattggacctctcagattagtcgattcttaaatcggataatgagtttt 48199470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 1469192 - 1469242
Alignment:
Q  176 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg 226  Q
    ||||||||||| |||||||||||||||| | |||| || ||||||||||||    
T  1469192 tgccaatttcgatgggcaagtccatacaaagctttactttggctttaaatg 1469242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 22299966 - 22300004
Alignment:
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  22299966 ctcggattagtcgattcttgaatcggataccgagttttc 22300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 11910079 - 11909978
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggcccc-acacgtgggcggtgggattggtcc-ctcggattagtc 268  Q
    |||||| |||||| ||||| |||||||||||  | ||||| ||| |||||||| | |||||| ||| |||| ||||||||||||||| |||| |||||||    
T  11910079 ctggtgtcaattttggtggtcaagtccatacgaagctttgttctagctttaaacgaggcccctacaagtggacggtgggattggtcctctcgaattagtc 11909980  T
Q  269 ga 270  Q
    ||    
T  11909979 ga 11909978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 25102862 - 25102809
Alignment:
Q  242 cggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||| ||| |||||||||||| ||||||||| |||||||| ||||    
T  25102862 cggtgggattggttccttcggattagtcgattcttggatcagataccgattttt 25102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  240 ggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtt 292  Q
    |||||||||||||||||| |||| |||||||  |||| ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 47381034 - 47381091
Alignment:
Q  237 gtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||||||||| | ||||||||   |||| ||||||||| |||||||    
T  47381034 gtgggcggtgggattggtcccttgaattagtcggtccttgaatcggatactgagtttt 47381091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 22299909 - 22299945
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc 192  Q
    ||||||||||||| | |||||||||||||||||||||    
T  22299909 tcaagttcgattccctctggtgccaatttcggtgggc 22299945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 42814928 - 42814995
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg 227  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||| ||  |||||||| ||||||||||    
T  42814928 gttcgattccctctggtgtcaatttcggtgggctaagtccataca-aagcttgctctgactttaaatgg 42814995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 34147406 - 34147544
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  34147406 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 34147504  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34147505 cctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 34160022 - 34160160
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  34160022 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 34160120  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  34160121 cctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 21982457 - 21982320
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  ||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  21982457 gttcgattcccgatggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 21982359  T
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21982358 ctcggattagtcgattcttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 3222772 - 3222635
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc 257  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||| |||| || |||||||||||||||||||||    
T  3222772 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgtctttaaacggggccccgcaagtgggcggtgggattggtccc 3222674  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  3222673 ctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 9208312 - 9208449
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-c 256  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||  |||| || ||||||||||||||||||| |    
T  9208312 gttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtctc 9208411  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||| || ||||||| |||||||||  ||||||||||||    
T  9208412 ctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 15360235 - 15360097
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  |||||||||||||||||||    
T  15360235 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 15360137  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  15360136 cctcggattagtcgattcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 11448931 - 11449068
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||  |||| || |||||||||||||||||| |    
T  11448931 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 11449029  T
Q  256 cctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||| ||||| |||||||| ||||||||    
T  11449030 cctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 654283 - 654146
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||||||||||||||||||    
T  654283 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 654185  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| | |||||||||||||||||||||    
T  654184 cctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 293
Target Start/End: Original strand, 9239035 - 9239171
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||  ||||||||| ||| ||| ||| ||||||||||||||  |||| || ||||||||||||||||||||    
T  9239035 gttcgattccctctggtgccaatttcggtgggttaagtccatatagagctt-gctttggctttaaatggggcccccgcaagtgggcggtgggattggtcc 9239133  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    | ||||||||||||| ||||||||||||||||||||||    
T  9239134 cctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 21148651 - 21148510
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattgg 253  Q
    ||||||||||||| | || |||||||||||| ||||| ||||||||||||| ||| |||||| ||||||| ||| |||| || |||||||||||||||||    
T  21148651 tcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacggggccccgcaagtgggcggtgggattgg 21148553  T
Q  254 tccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||    
T  21148552 tcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 1344995 - 1345133
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||| | ||| |||||||||||||| ||||||| | |  |||| |||||||||||||||    
T  1344995 gttcgattccctctggtgccaatttcagtgggctaagtccatacaaagctt-gctctggctttaaacgggccccccgcaagtggacggtgggattggtcc 1345093  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | | ||||||||||| ||||||||||||||||||||||||    
T  1345094 ccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 9690756 - 9690638
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc-ctcggattagtcgaatct 274  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||| |||  |||| ||||||||||||||| |||||||||||||| |||    
T  9690756 caatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattct 9690658  T
Q  275 tggatcggataccgagtttt 294  Q
    ||||||||||||||||||||    
T  9690657 tggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 33499547 - 33499672
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggt-ccctcggattagtc 268  Q
    |||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||    
T  33499547 ctggtgtcaatttcggtgggctagtccatacaaatctttgctttggctttaaatgggccctccacaagtgggcggtgggattggtcccctcggattagtc 33499646  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
       |  |||| |||||||||||||||    
T  33499647 agttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 5360192 - 5360071
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaa 271  Q
    ||||||||||||||||| ||||||||||||| ||| |||||| ||||||| ||   ||||||| ||||||||||||||||||||| ||| |||||||||     
T  5360192 tgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgat 5360094  T
Q  272 tcttggatcggataccgagtttt 294  Q
    |||| ||||||||||||||||||    
T  5360093 tcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 28672127 - 28672264
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||| ||||||| ||||||||||||| ||| | | |||||||||| ||||||| | |  ||||||||||||||||||||    
T  28672127 gttcgattccctctggtgtcaattttggtgggctaagtccatacagagctt-gttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcc 28672225  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| ||||||||| |||||||||||||    
T  28672226 cctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 12390485 - 12390620
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaa--atgggccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||  | || |||| || |||||||||||||||||| |    
T  12390485 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 12390583  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||   ||  ||||||||||||||||||    
T  12390584 cctcggattagtcga---ttaaatcggataccgagttttc 12390620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 10377788 - 10377911
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt-ccctcggattagtc 268  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||| ||| |||   ||||||| ||||||||||| |||||| |||||||| |||||    
T  10377788 tggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctcggagtagtc 10377887  T
Q  269 gaatcttggatcggataccgagtt 292  Q
    |   ||||||| ||||||||||||    
T  10377888 ggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 17081195 - 17081053
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||| ||| |||||| |||||||||||  |||| || ||||||||||||||||    
T  17081195 tcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattg 17081097  T
Q  253 gt-ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    || |||||| || ||| |  |||||||||| |||||||||||||    
T  17081096 gtcccctcgaataagttgtttcttggatcgaataccgagttttc 17081053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 15730579 - 15730495
Alignment:
Q  213 tctggctttaaa--tgggccccacacgtgggcggtgggattggtc-cctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  15730579 tctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 9844010 - 9844136
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccct-cggattagt 267  Q
    |||||| |||||| ||||||  ||||||||||||| ||| | |||||||||||| |||  |||| || |||||||||| ||||||||||| |||||||||    
T  9844010 ctggtgtcaattttggtgggttaagtccatacagagctt-gttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagt 9844108  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| |||||||||||||| |||||||||    
T  9844109 cgattcttggatcggatatcgagttttc 9844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 292
Target Start/End: Complemental strand, 17149593 - 17149458
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-cc 256  Q
    ||||||||| | ||||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||||  |||| || |||  ||||||||||||| ||    
T  17149593 gttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattggtccc 17149494  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtt 292  Q
    |||| ||||||||   |||| ||| |||||||||||    
T  17149493 ctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 14504200 - 14504082
Alignment:
Q  179 caatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatctt 275  Q
    |||||||| |||| ||||||||||||   |||||||||| ||||||||||  |||| || |||||||||||||||| ||| |||| |||||||||  |||    
T  14504200 caatttcgatgggtaagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatcctt 14504101  T
Q  276 ggatcggataccgagtttt 294  Q
    | |||||||||||||||||    
T  14504100 gtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 14213010 - 14213080
Alignment:
Q  226 gggccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  14213010 gggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 294
Target Start/End: Original strand, 11840963 - 11841097
Alignment:
Q  162 tcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc-t 258  Q
    ||||||| | ||||||||||||||||||||  ||||||||||| | ||| ||| ||| |||||| ||| ||||| | |||| |||||||||| ||||| |    
T  11840963 tcgattccctctggtgccaatttcggtgggttaagtccatacaaagctt-gctttggttttaaacggggccccataagtggacggtgggattagtcccct 11841061  T
Q  259 cggattagtcgaatcttggatcggataccgagtttt 294  Q
    || ||||||||| | |||||||||||||||||||||    
T  11841062 cgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 11007244 - 11007363
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 274  Q
    |||||||||||||| ||||||||||| | ||| ||||| |||||||  |||  |||| || ||||||||||||||||| ||| ||||||||||||| |||    
T  11007244 caatttcggtgggctaagtccatacaaagctt-gctctagctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattct 11007342  T
Q  275 tggatcggataccgagttttc 295  Q
    | ||||||||||| |||||||    
T  11007343 ttgatcggatacctagttttc 11007363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 17225739 - 17225863
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggtc-cctcggattagtcg 269  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| | ||  ||  ||||||| ||  ||||||||||||||| || |||| |||||||||    
T  17225739 ctggtgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacggggccccgcaaatgggcggtgggattgatctcctcagattagtcg 17225838  T
Q  270 aatcttggatcggataccgagtttt 294  Q
       ||| ||||||||| ||||||||    
T  17225839 gtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 6383998 - 6383919
Alignment:
Q  174 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggatt 251  Q
    |||||||||||| |||||| |||||||| ||| ||||||| ||||||||||||||  ||||||| |||| | ||||||||    
T  6383998 ggtgccaatttcagtgggctagtccataaagagctttgctttggctttaaatgggacccccacaagtggacagtgggatt 6383919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 21903748 - 21903618
Alignment:
Q  175 gtgccaatttcggtgggcaagtccatacagaactttgctctggct------ttaaatgggcc-cca-cacgtgggcggtgggattggtccc--tcggatt 264  Q
    |||||| |||| ||||| ||||||||||||| |||||||||||||      ||||||||| | ||| || ||||||||||||| |||||||  || ||||    
T  21903748 gtgccattttcagtgggtaagtccatacagagctttgctctggctctggctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagatt 21903649  T
Q  265 agtcgaatcttggatcggataccgagttttc 295  Q
    |||||| ||||||||||||| | ||||||||    
T  21903648 agtcgattcttggatcggatgcagagttttc 21903618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 3907597 - 3907657
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctgg 217  Q
    ||||||||||||||| |||||||||||||  | |||||||||||||||  ||||||||||||    
T  3907597 tcaagttcgattctctctggtgccaattt-tgcgggcaagtccatacaagactttgctctgg 3907657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 17706408 - 17706318
Alignment:
Q  208 tttgctctggctttaaa-tgggccc-cacacgtgggcggtgggattggtc-cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||| ||||||| | || |||| ||||| |||||||  |||||||| |||| | |||||||||||||||||| |||||    
T  17706408 tttgctctggctttaaactgggccctcgcaagtggacggtgtgattggtttcctcggataagtcaattcttggatcggataccgaattttc 17706318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 7491698 - 7491665
Alignment:
Q  262 attagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||| ||||||||||||||||||||||||    
T  7491698 attagtcgattcttggatcggataccgagttttc 7491665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 12591697 - 12591761
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||| | || ||||||||||| |||||| ||||||||||||| | ||||||||||||||||    
T  12591697 gttcgattccctctcgtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaa 12591761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 33718527 - 33718478
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggata 285  Q
    |||| ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  33718527 gtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 9583432 - 9583464
Alignment:
Q  159 agttcgattctccctggtgccaatttcggtggg 191  Q
    |||||||||||| ||||||||||||||||||||    
T  9583432 agttcgattctctctggtgccaatttcggtggg 9583464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 44946190 - 44946052
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  44946190 gttcgattccctttggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcc 44946092  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  44946091 cctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 24196064 - 24196200
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggt-ccc 257  Q
    ||||||||| | ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||| |||    
T  24196064 gttcgattccctctggtgcaaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccgcaagtgggcggtgggattggtcccc 24196162  T
Q  258 tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||| | || ||| |||||||||||||||    
T  24196163 tcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 30466967 - 30466830
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||  |||| || |||||| |||||||||||||    
T  30466967 gttcgattctctctgctgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcc 30466869  T
Q  257 ct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
    || |||||||||||| |||||||||||||||||||||||    
T  30466868 cttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 33827710 - 33827572
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||| |||   || ||||||||||||||||||||    
T  33827710 gttcgattccctctggtgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacgggacccctgcaagtgggcggtgggattggtcc 33827612  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | | ||||||||||| ||||||||||||||||||||||||    
T  33827611 ccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 35171860 - 35171998
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||  ||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  35171860 gttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 35171958  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||| ||||||||||||||||||    
T  35171959 cctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 2140620 - 2140485
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccac---acgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| ||||||||||||   |||||||||||| ||| |||||||||||||||||||||| |   | ||||||||||||||||||||    
T  2140620 gttcgattccctctggtgtcaatttcggtgg---agtccatacagagctt-gctctggctttaaatgggcccccccgcaagtgggcggtgggattggtcc 2140525  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| | ||||||||||||||||||||||    
T  2140524 cctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 28668946 - 28669071
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    |||||||||||||||||| | ||||||||||||| ||| ||| |||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagctt-gctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtc 28669044  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
    || | ||||||||||||||||||||||    
T  28669045 gatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 11941334 - 11941210
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    |||||||||||| ||||||  ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||| |||||||||||    
T  11941334 tggtgccaattttggtgggttaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtc 11941236  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
    || |||||||||||||||||||||||    
T  11941235 gattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 8192488 - 8192351
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggatt-ggtccc 257  Q
    ||||||||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||||  || || ||| | || ||||||||||||||| || |||    
T  8192488 gttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacggcccctcgcaagtgggcggtgggattgggcccc 8192389  T
Q  258 tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||   |||||||||||||||||||||||    
T  8192388 tcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 17324826 - 17324961
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-cc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||| || ||    
T  17324826 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgggcccccacaagtgggcggtgggattagtccc 17324924  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||  ||||||||| |||| ||||||||| ||||||||    
T  17324925 ctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 15038019 - 15038157
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||| ||| ||| |||||||||| ||   |||| || ||||||||||||||||||||    
T  15038019 gttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaagtgggcggtgggattggtcc 15038117  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | || |||||||||| ||||||||||||||||||||||||    
T  15038118 cctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 34516530 - 34516413
Alignment:
Q  180 aatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcgaatcttg 276  Q
    ||||||||||||| ||||||||||||| ||| ||||| |||||||| |||||||  || ||||||||||||||||||||| ||||||||||||| |||||    
T  34516530 aatttcggtgggctaagtccatacagagctt-gctctcgctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T
Q  277 gatcggataccgagttttc 295  Q
    ||||||||||| |||||||    
T  34516431 gatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 36390693 - 36390569
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtc 268  Q
    ||||||||||||||||||| | ||||||||||| | ||| |||||| |||||||||||  |||| || ||||||||||||||||||||||||||| ||||    
T  36390693 ctggtgccaatttcggtggactaagtccatacaaagctt-gctctgactttaaatgggacccccgcaagtgggcggtgggattggtccctcggatcagtc 36390595  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
    ||  |||| |||||||||||||||||    
T  36390594 gatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 43374462 - 43374329
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccct 258  Q
    ||||||||| | ||||||||||||||||||||| ||||  ||||| | ||| |||||||||||||   | |||| || ||| ||||||||||||||||||    
T  43374462 gttcgattccctctggtgccaatttcggtgggctaagtttatacaaagctt-gctctggctttaa---gcccccgcaagtgagcggtgggattggtccct 43374367  T
Q  259 -cggattagtcgaatcttggatcggataccgagttttc 295  Q
     |||||||||||| ||||||||||||||||||||||||    
T  43374366 tcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 4618822 - 4618754
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4618822 gttcgatttcccctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctttaaatggg 4618754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 287
Target Start/End: Complemental strand, 36242449 - 36242319
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||||||||||| |||||||  |||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  36242449 gttcgattccctctggtgtcaatttcggtgggctaagtccagccagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc 36242351  T
Q  257 c-tcggattagtcgaatcttggatcggatacc 287  Q
    | |||||||| |||| ||||||||||||||||    
T  36242350 cctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 19054108 - 19054224
Alignment:
Q  183 ttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttgg 277  Q
    |||||||||| ||||||||||||| ||| ||| |||||||||||||    |||| || |||||||||||||||||||| |||||||||||||| ||||||    
T  19054108 ttcggtgggctaagtccatacagagctt-gctttggctttaaatggaaccccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttgg 19054206  T
Q  278 atcggataccgagttttc 295  Q
    ||| ||||||||||||||    
T  19054207 atcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 26176333 - 26176235
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccct 258  Q
    |||||||||||||||||||||||| ||||| | |||||||||||| ||||||| ||| |||||||||| |||| || |||| |||||||||||| ||||    
T  26176333 ttcgattctccctggtgccaattttggtggcctagtccatacagacctttgctttggatttaaatgggcccccgcaagtggacggtgggattggaccct 26176235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 41329904 - 41330039
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc 257  Q
    |||||||| | ||||||||||||| || |||| ||||||||| ||| ||| ||||||||||||||||||  ||||||| |||||||||| ||||||||||    
T  41329904 ttcgattccctctggtgccaattttggcgggctaagtccata-agagctt-gctctggctttaaatggggcccccacaagtgggcggtgagattggtccc 41330001  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     || |||||||||  ||||||| |||||||||||||||    
T  41330002 ctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 27269467 - 27269344
Alignment:
Q  174 ggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtccc-tcggattagtcg 269  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||||||||||||  | ||  || || |||||||||||||||| |||| ||||||||||||    
T  27269467 ggtgtcaatttcggtgggctaagtccatatagaactt-gctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcg 27269369  T
Q  270 aatcttggatcggataccgagtttt 294  Q
    | |||||||| ||||||||||||||    
T  27269368 attcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 3943801 - 3943938
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtccc 257  Q
    ||||||| || ||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||| |||||||||||||||    
T  3943801 ttcgattttctctggtgccaatttcggttggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggtggtgggattggtccc 3943899  T
Q  258 -tcggattagtcgaatcttggatcggataccgagttttc 295  Q
     | ||||||||||  | |||||||||||||| |||||||    
T  3943900 cttggattagtcggttattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 18692091 - 18692158
Alignment:
Q  229 ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  18692091 ccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 44976291 - 44976172
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtc 255  Q
    ||||||||| | ||||||||||||| ||||||| |||||||||||| | ||||||||||||||||| |||   |||| || |||||||||||||||| ||    
T  44976291 gttcgattccctctggtgccaattttggtgggctaagtccatacag-agtttgctctggctttaaacggggctccccgcaagtgggcggtgggattgatc 44976193  T
Q  256 cc-tcggattagtcgaatctt 275  Q
    || ||||||||||||| ||||    
T  44976192 ccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 13266550 - 13266686
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtccc 257  Q
    ||||||||| | |||||||||||| |||||| | ||||||||||||| ||| |||||||||||||| ||| |||| || |||||   |||||||||||||    
T  13266550 gttcgattcactctggtgccaattccggtggactaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggtaatgggattggtccc 13266648  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||  ||||||||| |||||||||||||| ||||||||    
T  13266649 ctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 25293269 - 25293356
Alignment:
Q  211 gctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||| |||   |||| || ||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25293269 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 5394077 - 5394215
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc--cacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||| |||||||| ||||| |||||||||||||  ||||||||| ||||||||||| ||  | || ||||||||||||||||||||    
T  5394077 gttcgattccctctggtgtcaatttcgatgggctaagtccatacagag-tttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtcc 5394175  T
Q  257 -ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
      ||||||||||||   ||| ||||||||||||| |||||    
T  5394176 gttcggattagtcggtccttagatcggataccgaattttc 5394215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 19174835 - 19174959
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggt-ccctcggattagtcg 269  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||  || || |||||  |  ||||||||||||||| | ||||||||||| |||    
T  19174835 ctggtgccaatttcggtgggtaggtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgggattgatcccctcggattaatcg 19174934  T
Q  270 aatcttggatcggataccgagtttt 294  Q
       ||||||||||||||||| ||||    
T  19174935 gtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 10582127 - 10581995
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattggt-cc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | ||||||| |||||||| |||||| | || |||||| ||||||||||| ||    
T  10582127 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctagctttaaacgggccctcgcaagtgggc-gtgggattggtccc 10582030  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||   ||  |||||||||||||||||    
T  10582029 ctcgaattagtcga---ttaaatcggataccgagtttt 10581995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 41314052 - 41314189
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-cc 256  Q
    ||||||||| | |||||| |||||||||||||| ||||| ||||||| | |||||||| ||||||| |||  ||| || |||| ||||||||||||| ||    
T  41314052 gttcgattccctctggtgtcaatttcggtgggctaagtctatacagagc-ttgctctgactttaaacgggatcccgcaagtggacggtgggattggtccc 41314150  T
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||| ||||| |||| |||| ||||||||||| |||||||    
T  41314151 ctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 28194270 - 28194225
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacaga 205  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  28194270 gttcgattctctctggtgccaatttcggtgggcaagtccatacaga 28194225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 14946839 - 14946975
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggt-ccc 257  Q
    |||||||| || |||||| ||||||| |||||| |||||||||| || || |||||| |||||||| || |||| || || ||| ||||||||||| |||    
T  14946839 gttcgattttctctggtgtcaatttcagtgggctaagtccatacggagctatgctctagctttaaacggaccccccaagtaggcagtgggattggtcccc 14946938  T
Q  258 tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    || ||||||||   | |||||||||| ||||||||||    
T  14946939 tcagattagtcagtttttggatcggagaccgagtttt 14946975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 19605962 - 19605846
Alignment:
Q  180 aatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttgg 277  Q
    ||||||||||||||||||||||||||   |||||||  |||  ||| ||| |||||| |||||||||| ||||||| |||||| |||||| ||  |||||    
T  19605962 aatttcggtgggcaagtccatacagagtcttgctctcacttagaaagggggcccacaagtgggcggtgagattggtcccctcgaattagttgacacttgg 19605863  T
Q  278 atcggataccgagtttt 294  Q
    |||||||| ||||||||    
T  19605862 atcggatatcgagtttt 19605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 4567562 - 4567428
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcg--------gtgggattggtcc-ctc 259  Q
    ||||||||||||||||||||| || |||||||||| | ||| |||||||||||| |||  ||||||| |||||||        ||||||||||||| |||    
T  4567562 ctggtgccaatttcggtgggctaaatccatacagagc-ttgttctggctttaaacggggcccccacaagtgggcggtgggattgtgggattggtcctctc 4567464  T
Q  260 ggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||| | |||||||||||||||| |||||||    
T  4567463 ggattagtcaattcttggatcggatacccagttttc 4567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 14486964 - 14487023
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  14486964 gtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 18976513 - 18976454
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  18976513 gtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 39957897 - 39957956
Alignment:
Q  237 gtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  39957897 gtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 31778140 - 31778228
Alignment:
Q  209 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||||||||||  |||| || |||| ||||| ||||||||| ||| ||||||||   |||||||||||||||||||||||    
T  31778140 ttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 44610148 - 44610236
Alignment:
Q  209 ttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||| |||||||||||| |||   || ||||||||||||||||||||| ||||||||||||  ||||||| || ||||||||||||    
T  44610148 ttgctctagctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 8258957 - 8259095
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||  |||||||| ||||||  ||||||||||||| ||| | |||||||||||  |||  |||| || || |||||||||||| || |    
T  8258957 gttcgattccctctgacgccaattttggtgggttaagtccatacagatctt-gttctggctttaatcggggcccccgcaagtaggcggtgggattagttc 8259055  T
Q  257 ct-cggattagtcgaatcttggatcggataccgagttttc 295  Q
    || |||||||||||| ||||||||||||||| ||||||||    
T  8259056 cttcggattagtcgattcttggatcggatactgagttttc 8259095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 13747628 - 13747576
Alignment:
Q  174 ggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg 226  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||||||||||    
T  13747628 ggtgccgatttcggtgggctagtccatacagtgctttgctctggctttaaatg 13747576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 27290732 - 27290772
Alignment:
Q  255 ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  27290732 ccctcggattagtcgattcttggatcggataccgagttttc 27290772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 45132398 - 45132477
Alignment:
Q  211 gctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggatacc 287  Q
    |||||||||||||| |||  ||||||| |||||| || |||||||||| ||||||||| |||| ||||||||||||||||    
T  45132398 gctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 161 - 294
Target Start/End: Complemental strand, 6007025 - 6006890
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggtc-cct 258  Q
    |||||||||| ||| | ||||||||||||  | |||||||||||| ||||| ||| |||| |||||| || |  || |||| ||||| |||||||| |||    
T  6007025 ttcgattctctctgataccaatttcggtgttcgagtccatacagagctttgttctagcttaaaatggagctctgcaagtggacggtgtgattggtctcct 6006926  T
Q  259 cggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||  |||| ||| |||||||||||||    
T  6006925 cagattagtcgatccttgaatcagataccgagtttt 6006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 27290662 - 27290720
Alignment:
Q  174 ggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc 232  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||    
T  27290662 ggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccc 27290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 12543205 - 12543259
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctct 215  Q
    ||||||| || || |||||||||| |||||||||||||||||||| |||||||||    
T  12543205 ttcgattttctctagtgccaattttggtgggcaagtccatacagagctttgctct 12543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 44929904 - 44929846
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||||||||||| | | ||||||||| |||||||||||||||||||||||    
T  44929904 gtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 35797522 - 35797587
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat 225  Q
    |||||||| || |||||| |||||| ||||||||||| |||||| ||||||| | |||||||||||    
T  35797522 gttcgattttctctggtgtcaattttggtgggcaagttcatacaaaactttggtttggctttaaat 35797587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 45271444 - 45271508
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||| | |||||||||||||| |||||| ||||||||||||| | ||||||||||||||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaa 45271508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 30943152 - 30943208
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgc 212  Q
    ||||||| ||||||| ||  ||||||||||||||||| |||||||||||| ||||||    
T  30943152 tcaagtttgattctctcttatgccaatttcggtgggctagtccatacagagctttgc 30943208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 9641101 - 9641208
Alignment:
Q  179 caatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggccccacacgtgggcggtgggattggtccctcggattagtcgaatcttgg 277  Q
    |||||| |||||| ||||||||||| ||||||||| |||||||||| |    | |  | |||| ||||| |||||||||||| |||||||||  ||||||    
T  9641101 caattttggtgggtaagtccatacaaaactttgctttggctttaaacgacatctcgtaagtggacggtgagattggtccctcagattagtcggttcttgg 9641200  T
Q  278 atcggata 285  Q
    ||||||||    
T  9641201 atcggata 9641208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 19525533 - 19525490
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccataca 203  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||    
T  19525533 gttcgattccctctggtgccaattttggtgggcaagtccataca 19525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 38784295 - 38784181
Alignment:
Q  181 atttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggat 279  Q
    |||||||||| |||||||||||  ||||||  | || |||||||| |||||| || |||| ||||| ||||| |||| || ||||||| || |||| |||    
T  38784295 atttcggtggacaagtccatactaaactttaatttgactttaaataggccccgcaagtggacggtgagattgatcccttcagattagttgattcttagat 38784196  T
Q  280 cggataccgagtttt 294  Q
    |  ||||||||||||    
T  38784195 caaataccgagtttt 38784181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  247 ggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  1501511 ggattggtcccctcggattagtcgattcttg-atcggataccgagttttc 1501463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 294
Target Start/End: Original strand, 4852657 - 4852726
Alignment:
Q  226 gggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||| || |||| |||||| ||||||||| |||||||| |||| ||||||||||||| || ||||||    
T  4852657 gggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 23787133 - 23787077
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||| |||||||||||    
T  23787133 ctggtgccaatttcggtgggctaaatccatacag-agtttgctctgactttaaatggg 23787077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 40591255 - 40591288
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacaga 205  Q
    |||||| |||||||||||||||||||||||||||    
T  40591255 ctggtggcaatttcggtgggcaagtccatacaga 40591288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 3405289 - 3405225
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaa 224  Q
    ||||||||| | |||||||||||||   |||||||||||||||| | |||| |||| ||||||||    
T  3405289 gttcgattccctctggtgccaattttaatgggcaagtccatacaaagctttactctagctttaaa 3405225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 16510305 - 16510361
Alignment:
Q  176 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 232  Q
    |||||||||| |||||| |||||||||| | |  |||||||||||||||||| ||||    
T  16510305 tgccaatttctgtgggctagtccatacaaagcaatgctctggctttaaatggccccc 16510361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 28194193 - 28194137
Alignment:
Q  240 ggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| | || |||||||||   |||||||||||||||||||||||    
T  28194193 ggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttttc 28194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 29698219 - 29698263
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctg 216  Q
    |||||| |||||||||||||||||| |||||||| |||| |||||    
T  29698219 ctggtgtcaatttcggtgggcaagttcatacagagctttactctg 29698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 4621374 - 4621236
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  4621374 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcc 4621276  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  4621275 cctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 15059539 - 15059401
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||| |||||||||    
T  15059539 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgagattggtcc 15059441  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||| ||||||||| ||||||||||||||||||||||||    
T  15059440 cctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 24122083 - 24122220
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |  || || ||||||||||||||||||||    
T  24122083 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcc 24122181  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  24122182 cctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 9500492 - 9500355
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||   ||||||| |||||||||| ||||||||     
T  9500492 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggagcccccacaagtgggcggtgagattggtct 9500394  T
Q  257 ct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
    || |||||||||||| |||||||||||||| ||||||||    
T  9500393 cttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 24674453 - 24674590
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| || ||||||||||||||||||||    
T  24674453 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 24674551  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||| ||||||||| |||||||||||||||||| ||||    
T  24674552 cctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 17935844 - 17935965
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc-ctcggattagtcga 270  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||| |||  |||| || ||||||| |||||||||||| ||||||||||||||    
T  17935844 gtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcga 17935942  T
Q  271 atcttggatcggataccgagttt 293  Q
     ||||||||||||||||||||||    
T  17935943 ttcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 32729605 - 32729742
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-cc 256  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  |||| || |||||||||||||||| | ||    
T  32729605 gttcgattccctatggtgccaatttcggtgggcaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatccc 32729703  T
Q  257 ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    || ||||||||||    ||||||||||||||||||||||    
T  32729704 cttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 7766864 - 7766726
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||| ||||||||||||| ||||||||||||| ||| |||||| ||||||| |||  |||| || ||||||||||||||||||||    
T  7766864 gttcgattccctctggtgctaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaagtgggcggtgggattggtcc 7766766  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||| |||||||| |||||||||    
T  7766765 cctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 27455003 - 27454863
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacacg----tgggcggtgggattggt 254  Q
    ||||||||| | ||| |||||||||||||| || ||||||||||||| ||| |||||||||||||| ||||||| | ||    |||||||||||||||||    
T  27455003 gttcgattcactctgatgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacgggccccccccgcatgtgggcggtgggattggt 27454905  T
Q  255 ccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||| ||||||||||||| |||||||||||||||| |||||||    
T  27454904 cccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 7197383 - 7197247
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg-ggcccca-cacgtgggcggtgggattggtccc 257  Q
    ||||||||| | ||| |||||||||||||||| ||||| ||||||| ||| |||||||||||||| | ||||||  || |||||||||| ||||||||||    
T  7197383 gttcgattccctctgatgccaatttcggtgggtaagtcaatacagacctt-gctctggctttaaacgaggcccctgcaagtgggcggtgagattggtccc 7197285  T
Q  258 -tcggattagtcgaatcttggatcggataccgagtttt 294  Q
     ||||||||||||| || ||||||||||||||||||||    
T  7197284 ctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 160 - 292
Target Start/End: Original strand, 8077707 - 8077841
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaa--atgggccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||  | || |||| || ||||||||||||||||||||    
T  8077707 gttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcc 8077805  T
Q  257 ctcggattagtcgaatcttggatcggataccgagtt 292  Q
    |   ||||| |||| | |||||||||| ||||||||    
T  8077806 cctcgattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 8254889 - 8254751
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    |||||||| || |||||| |||||||||||||| |||| |||||||||||| |||||||||||||| |||  |||| || |||||||||||||||| |||    
T  8254889 gttcgattatctctggtgtcaatttcggtgggctaagttcatacagaactt-gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcc 8254791  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | | | ||||||||| ||||| ||||||||||||||||||    
T  8254790 ccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 30677248 - 30677374
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagt 267  Q
    ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||  |||| || |||||||||||||||||| ||||| |||||||    
T  30677248 ctggtgccaatttcggtgggctaagtccatacagagc-ttgctttggctttaaatgggacccccgcaagtgggcggtgggattggtcccctcagattagt 30677346  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||  ||||||| |||||| |||||||||    
T  30677347 cggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 1378970 - 1379090
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtc 268  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||  || |||| ||||| |||||||||| || ||||||||    
T  1378970 ctggtgtcaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggcccccgcaagtggacggtgagattggtcccctcagattagtc 1379068  T
Q  269 gaatcttggatcggataccgag 290  Q
    || |||| ||||||||||||||    
T  1379069 gattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 46607870 - 46608008
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg--gccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| ||   |||| || |||||||||||||||| | |    
T  46607870 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcc 46607968  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||   ||||||||||||| |||||||||    
T  46607969 cctcggattagtcggtccttggatcggatatcgagttttc 46608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 7578469 - 7578607
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggt-c 255  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||| | ||| |||||| ||||||| ||| ||| | |  ||||| |||||||||||| |    
T  7578469 gttcgattccctatggtgccaatttcggtgggctaagtccatacaaagctt-gctctgactttaaacggggccctcgcaagtgggtggtgggattggttc 7578567  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||| || | ||||||||||||||||||||||    
T  7578568 cctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 37351538 - 37351454
Alignment:
Q  211 gctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  37351538 gctctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 26513235 - 26513148
Alignment:
Q  209 ttgctctggctttaaatgggcccc-acacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||| ||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  26513235 ttgctctgactttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 36156025 - 36155888
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| |||||||| |||| ||| ||| | | ||||||  ||  |||| || ||||||||||||||||||||    
T  36156025 gttcgattccctctggtgccaatttcggtgggccaagtccatgcagagctt-gctttagttttaaacagggcccccgcaggtgggcggtgggattggtcc 36155927  T
Q  257 ct-cggattagtcgaatcttggatcggataccgagtttt 294  Q
    || |  ||||||||| |||||||||||||||||||||||    
T  36155926 cttcaaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 18646913 - 18647045
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgg-gcccc-acacgtgggcggtgggattggt-c 255  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| || |||||   | |||||||||| ||||| | |    
T  18646913 gttcgattctctctggtgccaatttcggtgggctaagtctataca-aagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcc 18647011  T
Q  256 cctcggattagtcgaatcttggatcggataccga 289  Q
    ||||| ||||||||| ||||| ||||||||||||    
T  18647012 cctcgaattagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 36921616 - 36921513
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccctcggattagtcgaatcttggatcggataccga 289  Q
    ||||||||||| ||||||| ||||||||||||||||   |||| || |||| |||||||||| |||||||  ||||||||| | ||| ||||||||||||    
T  36921616 aagtccatacaaaactttgatctggctttaaatgggaccccccgcaagtggacggtgggattagtccctcaaattagtcgattattgaatcggataccga 36921517  T
Q  290 gttt 293  Q
    ||||    
T  36921516 gttt 36921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 37047056 - 37047164
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg-tccctcg 260  Q
    ||||| ||||||| | ||||| ||||||| |||||||||||| ||||||||| ||||||||||||  ||||||| |||| ||||||||||||  |||| |    
T  37047056 gattccccctggtacaaattttggtgggctagtccatacagagctttgctctagctttaaatggggcccccacaagtggacggtgggattggacccctag 37047155  T
Q  261 gattagtcg 269  Q
    |||||||||    
T  37047156 gattagtcg 37047164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 19034523 - 19034467
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctg 216  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||||    
T  19034523 gttcgattatctctggtgccaatttcggtgggcaagtccatacagagctttgctctg 19034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 40802200 - 40802069
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtcc-ctcgg 261  Q
    |||||||| |||||||||||| | || ||||||||||||||| | |||||||| ||||||| ||| |||| || ||||| |||| ||||||||| || |     
T  40802200 gattctccatggtgccaattttgatgagcaagtccatacagagc-ttgctctgactttaaacgggtccccgcaagtgggtggtgagattggtcctctaga 40802102  T
Q  262 attagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||| ||||| |||| ||||||||||||    
T  40802101 attagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 7946900 - 7947002
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaat-gggccccacacgtgggcggtgggattgg 253  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| ||||||| | ||||||| ||||||||| ||||||| || ||||| |||| ||||||    
T  7946900 tcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctcgctttaaatggggccccgcaagtgggtggtgagattgg 7946998  T
Q  254 tccc 257  Q
    ||||    
T  7946999 tccc 7947002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 1486478 - 1486617
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg----ccccacacgtgggcggtgggattggt- 254  Q
    ||||||||| |  |||||||||||||| |||| ||||||||||||| |||||||||| |||  || |||    |||| || |||| ||||||||| |||     
T  1486478 gttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacggtgggatcggtc 1486577  T
Q  255 ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||| |||||||||   ||||||||||||||||||||||    
T  1486578 ccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 23734176 - 23734315
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt- 254  Q
    ||||||||| | ||| ||||||||||||||||| |||||||||||| | |||||| || ||||||| |||   |||| || ||||||||||  ||||||     
T  23734176 gttcgattccctctgatgccaatttcggtgggctaagtccatacag-agtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtc 23734274  T
Q  255 ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| |||||||||| ||||| |||||||||| |||||||    
T  23734275 ccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 23741368 - 23741507
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggt- 254  Q
    ||||||||| | ||| ||||||||||||||||| |||||||||||| | |||||| || ||||||| |||   |||| || ||||||||||  ||||||     
T  23741368 gttcgattccctctgatgccaatttcggtgggctaagtccatacag-agtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtc 23741466  T
Q  255 ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| |||||||||| ||||| |||||||||| |||||||    
T  23741467 ccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 34778447 - 34778535
Alignment:
Q  208 tttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttt 293  Q
    |||||| |||||||||| |||  |||| || |||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  34778447 tttgctttggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 8779854 - 8779744
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatct 274  Q
    |||||||||||||| ||||||||||| | |||  |||| |||||||| |||  ||||||| || |||||||||||||||||| ||||||||||||| |||    
T  8779854 caatttcggtgggctaagtccatacacagctta-ctctagctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattct 8779756  T
Q  275 tggatcggatac 286  Q
    | ||||||||||    
T  8779755 tagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 16539680 - 16539804
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctt-taaatgggccccacacgtgggcggtgggattggt-ccctcggattagtcg 269  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||||||  ||  ||||||   | ||||| |||||||||||| |||||  ||||||||    
T  16539680 ctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtgggattggtcccctcaaattagtcg 16539779  T
Q  270 aatcttggatcggataccgagtttt 294  Q
    |  |||| |||||||||||| ||||    
T  16539780 atacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 162 - 294
Target Start/End: Original strand, 31162812 - 31162947
Alignment:
Q  162 tcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccccacac--gtgggcggtgggattggtc-cct 258  Q
    ||||||| | ||||| ||||||||||||| || || |||||||  ||||||||| |||||||||||| |||||||  ||| || ||| ||||||||  ||    
T  31162812 tcgattcactctggtaccaatttcggtggacaggtacatacagtgctttgctctagctttaaatggggcccacacaagtgagcagtgagattggtcatct 31162911  T
Q  259 cggattagtcgaatcttggatcggataccgagtttt 294  Q
    |  |||||||||  |||| |||||||||||||||||    
T  31162912 ctaattagtcgatccttgaatcggataccgagtttt 31162947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 19480595 - 19480708
Alignment:
Q  161 ttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattgg-tc 255  Q
    |||||||| ||  |||||||||||  |||||| ||||||||| ||| || |||||||||||||||||||   |||| ||||||| |||||||||||| ||    
T  19480595 ttcgattccccgcggtgccaattttagtgggctaagtccatatagagctatgctctggctttaaatgggtacccccgcacgtggacggtgggattggatc 19480694  T
Q  256 cctcggattagtcg 269  Q
    |||||| |||||||    
T  19480695 cctcgggttagtcg 19480708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 39714791 - 39714649
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattgg 253  Q
    ||||||| ||||||||  |||||| |||||||||||| ||||||    || ||||||||||| ||||||||||  ||||||| ||||  |||||||||||    
T  39714791 tcaagtttgattctcctcggtgccgatttcggtgggctagtccaaggggagctttgctctggatttaaatgggccccccacaagtggatggtgggattgg 39714692  T
Q  254 tc-cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
     | ||||||||||||||   |||||   |||||||||||||||    
T  39714691 actcctcggattagtcggtccttgggctggataccgagttttc 39714649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 45859180 - 45859043
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaa--atgggccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||   | ||||||| |||||||  | || |||| || ||||| ||| |||||||| |    
T  45859180 gttcgattccctctggtgccaatttcggtgggctaagtccatacatcgc-ttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcc 45859082  T
Q  256 cctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||| || | |||||||||||||||| ||||    
T  45859081 cctcggattagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 48699898 - 48699957
Alignment:
Q  237 gtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||| |||||||||    
T  48699898 gtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 1138639 - 1138748
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc--acacgtgggcggtgggattggtccc 257  Q
    |||||| |||| || |||||||||||||||| |||||||||||||| |||||||||| |||  ||  || |||   || |||||| |||| |||||||||    
T  1138639 gttcgaatctctctagtgccaatttcggtggacaagtccatacagagctttgctctgacttagaacagggcccttgcaagtgggcagtggaattggtccc 1138738  T
Q  258 tcggattagt 267  Q
    ||||||||||    
T  1138739 tcggattagt 1138748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 16899563 - 16899620
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctgg 217  Q
    ||||||||| | ||||||||||||||||||||| |||||||||| | |||||||||||    
T  16899563 gttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctgg 16899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 23232402 - 23232300
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactt---tgctctggctttaaatggg--ccccacacgtgggcggtgggattgg 253  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| |||    ||||||||||||||||||  |||| || ||||| |||||||||||    
T  23232402 gttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtgggattgg 23232303  T
Q  254 tcc 256  Q
    |||    
T  23232302 tcc 23232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 809292 - 809419
Alignment:
Q  170 ccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcc--ccacacgtgggcggtgggattgg-tccctcggattag 266  Q
    |||| ||| ||||||||||||||||||||||||| | | ||| ||||||||| |||||| |     ||  |||||||||||||||| ||| ||||| |||    
T  809292 ccctagtgtcaatttcggtgggcaagtccatacaaagccttgatctggctttgaatggggcatttgcaaatgggcggtgggattggttccttcggagtag 809391  T
Q  267 tcgaatcttggatcggataccgagtttt 294  Q
    |||| |||||||| |||||| |||||||    
T  809392 tcgattcttggattggatactgagtttt 809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 14603954 - 14603994
Alignment:
Q  255 ccctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  14603954 ccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 25237126 - 25237070
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctg 216  Q
    ||||||||| | || |||||||||||||||||||||||||||||||  |||||||||    
T  25237126 gttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctg 25237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 27159159 - 27159283
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc-tcggattagtcga 270  Q
    |||||||||||  |||||  |||| ||| |||||||||| || || |||||| |||||||  || |||| |||||||||||||||| || ||||||||||    
T  27159159 tggtgccaattatggtggataagttcatgcagaactttgttcgggttttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcga 27159258  T
Q  271 atcttggatcggataccgagttttc 295  Q
       |||||||||||| |||||||||    
T  27159259 tctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 34965401 - 34965457
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||    
T  34965401 ctggtgccaattttggtgagcaagtctatagaaaactttgctctggctttaaatggg 34965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 43770103 - 43769975
Alignment:
Q  158 aagttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggtcc 256  Q
    ||||| |||||  ||| ||| |||||||  |||||||||||||||||| | |  ||||| | || |||||| |||||||  |||||||||||||||||||    
T  43770103 aagtttgattcctcctagtgtcaatttcaatgggcaagtccatacagagcataactctgaccttgaatgggaccccacaaatgggcggtgggattggtcc 43770004  T
Q  257 c-tcggattagtcgaatcttggatcggat 284  Q
    | ||| ||||||||| ||| |||||||||    
T  43770003 cttcgaattagtcgattctaggatcggat 43769975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 45331746 - 45331621
Alignment:
Q  173 tggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg---ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    ||||| |||||||||||||| ||||||||||||| ||| ||| |||||||||| |||   |||| || |||| ||||||||||  |||| || ||||| |    
T  45331746 tggtggcaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaat 45331648  T
Q  268 cgaatcttggatcggataccgagtttt 294  Q
    ||| ||||| |||||||||||||||||    
T  45331647 cgattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 20907385 - 20907330
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||| || ||||||||    
T  20907385 tggtgccaatttcagtgggtaagtccatacagagctttgctctgactgtaaatggg 20907330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 22910010 - 22910069
Alignment:
Q  237 gtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||||||||||||| ||||| |||||||||||||  ||| |||||||||||||||||||    
T  22910010 gtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttc 22910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23041668 - 23041719
Alignment:
Q  244 gtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  23041668 gtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 2783065 - 2783115
Alignment:
Q  176 tgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatg 226  Q
    ||||||||||||||| |||||||||| ||| ||||||||||| ||||||||    
T  2783065 tgccaatttcggtggacaagtccatatagagctttgctctggttttaaatg 2783115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 5315478 - 5315528
Alignment:
Q  245 tgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 21726789 - 21726921
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| |  |||||||||||||| ||||  ||||||||| ||| ||| | ||| |||||||| |||  ||||||| |||||||||||| ||| |||    
T  21726789 gttcgattccctttggtgccaatttcgatgggttaagtccatatagagctt-gttctagctttaaacgggtcccccacaagtgggcggtggggttgatcc 21726887  T
Q  257 c-tcggattagtcgaatcttggatcggataccga 289  Q
    | || ||||| |||| ||||||||||||||||||    
T  21726888 cctcagattaatcgattcttggatcggataccga 21726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 35138127 - 35138185
Alignment:
Q  237 gtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||| | |||||||||||||||   ||||||||||||||||||||||    
T  35138127 gtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 40146008 - 40145889
Alignment:
Q  175 gtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc-------acacgtgggcggtgggattggtccc-tcggatta 265  Q
    ||||||||||  |||||| ||||||||||||| ||| |||||| |||||||||||||||       ||| ||||| |||| | |||||||| ||||||||    
T  40146008 gtgccaatttatgtgggctaagtccatacagagctt-gctctgactttaaatgggcccccacaaccacaagtgggtggtgagtttggtcccctcggatta 40145910  T
Q  266 gtcgaatcttggatcggatac 286  Q
    ||||| |||||||||||||||    
T  40145909 gtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 1095128 - 1095088
Alignment:
Q  172 ctggtgccaatttcggtgggcaagtccatacagaactttgc 212  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  1095128 ctggtgccaatttcggtgggcaagtacatacagagctttgc 1095088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 176 - 295
Target Start/End: Original strand, 2272420 - 2272542
Alignment:
Q  176 tgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccc--acacgtgggcggtgggattggtccc-tcggattagtcgaa 271  Q
    ||||||||||| ||||| |||| |||||| || ||||||||| ||||||| ||| |||  ||| | ||||||| |||||| |||| |||||||||||||     
T  2272420 tgccaatttcgctgggctaagttcataca-aagtttgctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgat 2272518  T
Q  272 tcttggatcggataccgagttttc 295  Q
    |||  |||||||||| ||||||||    
T  2272519 tctaagatcggatactgagttttc 2272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 20999287 - 20999235
Alignment:
Q  173 tggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaat 225  Q
    |||| ||||||||||||||| |||||||||||| |||| | ||||||||||||    
T  20999287 tggtaccaatttcggtgggctagtccatacagagctttacgctggctttaaat 20999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 40397406 - 40397342
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggg 228  Q
    ||||| || ||||| |||||||| |||||||||||||| ||| |||||  |||||||||||||||    
T  40397406 gattccccttggtgtcaatttcgatgggcaagtccatatagacctttgtcctggctttaaatggg 40397342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 17447338 - 17447432
Alignment:
Q  164 gattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgg-gccccacacgtgggcggtgggattggtccc 257  Q
    ||||||| |||||||||||||  |||| ||| |||||||| | | ||||||||| |||||||||  |||| || ||||| ||||||||| |||||    
T  17447338 gattctctctggtgccaattttagtggacaattccatacaaagccttgctctggatttaaatggacccccgcaagtgggaggtgggatttgtccc 17447432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 175 - 295
Target Start/End: Complemental strand, 26986206 - 26986084
Alignment:
Q  175 gtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggccc-cacacgtgggcggtgggattgg-tccctcggattagtcgaat 272  Q
    |||||||||||||||||| |||||||||| |  |||  ||||||||||||||| |||   |  |||| ||||||||||||  |||||||| ||||||       
T  26986206 gtgccaatttcggtgggctagtccatacaaagtttttttctggctttaaatggacccttgccagtggccggtgggattggacccctcggaatagtcggtc 26986107  T
Q  273 cttggatcggataccgagttttc 295  Q
    |||||  ||||||||||||||||    
T  26986106 cttgggccggataccgagttttc 26986084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 47360503 - 47360450
Alignment:
Q  179 caatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccc 232  Q
    ||||||| | |||| ||||||||| || ||||||||||||||||||||| ||||    
T  47360503 caatttctgcgggctagtccatacggagctttgctctggctttaaatggccccc 47360450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 6127999 - 6127963
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc 192  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  6127999 tcaagttcgattctccccggtgccaattttggtgggc 6127963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 31605860 - 31605824
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggc 192  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  31605860 tcaagttcgattctccccggtgccaatttgggtgggc 31605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 5219 - 5081
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||  |||| ||  |||||||||||||||||||    
T  5219 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcc 5121  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  5120 cctcggattagtcgattcttggatcggataccgagttttc 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 39148 - 39290
Alignment:
Q  156 tcaagttcgattctccctggtgccaatttcggtgggcaa-gtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    ||||||||||||| | ||||||||||||||||||||| | ||||||||||||||| | |||||||||||| |||  |||| || ||||||||||||||||    
T  39148 tcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacggggcccccgcaagtgggcggtgggattg 39246  T
Q  253 gtccc-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  39247 gtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 161869 - 162007
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||  |||| || ||||||||||||||||||||    
T  161869 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggcttttaatggggcccccgcaagtgggcggtgggattggtcc 161967  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| ||||||||| ||||||||||||||    
T  161968 cctcggattagtcgattcttggatcagataccgagttttc 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 7446 - 7309
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||  |||| || ||||||||||||||||||||    
T  7446 gttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttt-ctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 7348  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | ||||||||||||| |||||||||||||||| ||||||    
T  7347 cctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 53008 - 52870
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaag-tccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | |||||||||||||||||||||||  |||||||||| ||| |||||||||||||| |||  |||| || ||||||||| ||||||||||    
T  53008 gttcgattccctctggtgccaatttcggtgggcaaaatccatacagagctt-gctctggctttaaacggggcccccgcaggtgggcggtaggattggtcc 52910  T
Q  257 -ctcggattagtcgaatcttggatcggataccgagttttc 295  Q
     |||||||||||||| ||||| ||||||||||||||||||    
T  52909 tctcggattagtcgattcttgaatcggataccgagttttc 52870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 9436 - 9299
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||  |||| || |||| ||||||||||||| |    
T  9436 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcc 9338  T
Q  256 cctcggattagtcgaatcttggatcggataccgagttttc 295  Q
    ||||| ||||||||| |||| |||||||||||||||||||    
T  9337 cctcgaattagtcgattctt-gatcggataccgagttttc 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 12125 - 12000
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-ccctcggattagtc 268  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||    
T  12125 ctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtc 12027  T
Q  269 gaatcttggatc-ggataccgagttttc 295  Q
     | |||| |||| |||||||||||||||    
T  12026 aattctt-gatcgggataccgagttttc 12000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 1193 - 1057
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-c 255  Q
    ||||||||| | |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||  |||| || |||| ||||||||||||| |    
T  1193 gttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcc 1095  T
Q  256 cctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    ||||| ||||||||| |||| ||||||||||||||||||    
T  1094 cctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 10818 - 10694
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg-ccccacacgtgggcggtgggattggt-ccctcggattagtc 268  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||    
T  10818 ctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtc 10720  T
Q  269 gaatcttggatcggataccgagttttc 295  Q
     | |||| |||||||||||||||||||    
T  10719 aattctt-gatcggataccgagttttc 10694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 32360 - 32485
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagt 267  Q
    |||| |||||||||||||||| ||||||||||||| ||| |||||||||||||||| |  |||| || ||||| ||||||||||||||| ||||||||||    
T  32360 ctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggattagt 32458  T
Q  268 cgaatcttggatcggataccgagttttc 295  Q
    ||| ||||| ||||||||||||||||||    
T  32459 cgattcttg-atcggataccgagttttc 32485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 97503 - 97366
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||||| ||||||| |||  |||| || ||||||||||||||||||||    
T  97503 gttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgggacccccgcaagtgggcggtgggattggtcc 97405  T
Q  257 -ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
     |||| ||||||||  | ||||| |||||||||||||||    
T  97404 tctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 66863 - 66951
Alignment:
Q  209 ttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||| |||  |||| || ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  66863 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 29279 - 29143
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatgggcccca-cacgtgggcggtgggattggtccc- 257  Q
    ||||||||| | ||| ||||| ||||||| || ||||||||||||| |||||||||||||| |||||| ||||  ||  ||| | ||||||||||||||     
T  29279 gttcgattcccgctgatgccattttcggtcggtaagtccatacagagctttgctctggcttaaaatggacccccgcaaatggacagtgggattggtcccc 29180  T
Q  258 tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    || ||||||||    ||||||||||||||||||||||    
T  29179 tcagattagtcagtccttggatcggataccgagtttt 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 285
Target Start/End: Original strand, 15063 - 15178
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtc-cctcggattagt 267  Q
    ||||||| ||||||||||||  |||||||| |||| ||| ||||||||||||||||||  |||| || |||||||| |||||||||| ||||||||||||    
T  15063 ctggtgctaatttcggtgggttaagtccatccagagctt-gctctggctttaaatgggccccccgcaagtgggcgg-gggattggtctcctcggattagt 15160  T
Q  268 cgaatcttggatcggata 285  Q
    | | ||||||||||||||    
T  15161 caattcttggatcggata 15178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 13181 - 13047
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtcc 256  Q
    ||||||||| | ||||||||||||||||||||  ||||||||||||| ||| |||    ||||||| |||  |||| || |||| ||||||||||| |||    
T  13181 gttcgattccctctggtgccaatttcggtgggttaagtccatacagagctt-gcta---ctttaaacggggcccccgcaagtggacggtgggattgatcc 13086  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    | || ||||||| || |||||||||||||||||||||||    
T  13085 cctcagattagttgattcttggatcggataccgagtttt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 8509 - 8451
Alignment:
Q  237 gtgggcggtgggattggtcc-ctcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  8509 gtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 8544 - 8508
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagt 196  Q
    |||||||| || |||||||||||||||||||||||||    
T  8544 gttcgattatctctggtgccaatttcggtgggcaagt 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 2529 - 2426
Alignment:
Q  193 aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggt-ccctcggattagtcgaatcttggatcggataccga 289  Q
    ||||||||||||| ||| |||||||||||||| |||  |||| || |||||||||||||||||| ||||||||||||||    |||| ||||||||||||    
T  2529 aagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccga 2431  T
Q  290 gtttt 294  Q
    |||||    
T  2430 gtttt 2426  T

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Target: scaffold0157 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 20294 - 20418
Alignment:
Q  172 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattggtccctcggattagtc 268  Q
    ||||||||||||||  ||||| ||||||||||| | ||| |||||||||||||| |||  |||| || |||||||||   |||| || ||||||||||||    
T  20294 ctggtgccaatttcaatgggctaagtccatacatagctt-gctctggctttaaacgggacccccgcaagtgggcggtaaaattgatctctcggattagtc 20392  T
Q  269 gaatcttggatcggataccgagtttt 294  Q
     | ||||||| |||||||||||||||    
T  20393 aattcttggaccggataccgagtttt 20418  T

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Target: scaffold0068 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 41781 - 41644
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatgggcccca--cacgtgggcggtgggattggtcc 256  Q
    ||||||||| | || || ||||||||| || || ||||||||||||| ||| |||||||||||||| ||| |||   || ||||||  ||||||||||||    
T  41781 gttcgattccctcttgttccaatttcgttgtgctaagtccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcaatgggattggtcc 41683  T
Q  257 c-tcggattagtcgaatcttggatcggataccgagttttc 295  Q
    | ||||||||||||| |||| |||||||||| ||||||||    
T  41682 cctcggattagtcgattctt-gatcggatacagagttttc 41644  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 123134 - 123066
Alignment:
Q  226 gggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagtttt 294  Q
    |||||||||| ||| | ||||||||||||||| |||||||| |||| |||||||||||||||| ||||||    
T  123134 gggccccacaagtgtgtggtgggattggtcccctcggattaatcga-tcttggatcggataccaagtttt 123066  T

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Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 123188 - 123146
Alignment:
Q  160 gttcgattctccctggtgccaatttcggtgggcaagtccatac 202  Q
    ||||||||| | ||| |||||||||||||||||||||||||||    
T  123188 gttcgattccctctgttgccaatttcggtgggcaagtccatac 123146  T

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Target: scaffold0717 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 76 - 1
Alignment:
Q  179 caatttcggtgggc-aagtccatacagaactttgctctggctttaaatggg--ccccacacgtgggcggtgggattg 252  Q
    |||||||| ||||| |||||||||||||  |||||||| |||||||| |||  ||||||| ||||||||||||||||    
T  76 caatttcgatgggctaagtccatacagag-tttgctctagctttaaacggggcccccacatgtgggcggtgggattg 1  T

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